F392493

General Info

Members Datasets Scaffolds Average Seq Length
295 194 590 400

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100037147|Ga0070671_1000371472
Length 437
Sequence MLTRSTRTTTKQRGNSNSTHLDLYKNTILKNMKRRNVIKGLSLLPFAGSAIGSIIPSSFAVAAPGPKRDVFTELGLRTFINAAGTYTAMTASLMPEEVIEAINSSAKEFAMLDEVQDKAGAKIAEMCHAEAAMVSAGCWSAMVLGMAGVLTGTDPKKIAQLPFLQNTSMKSEVILQKSHMNGYEHSLTNAGVTLIPVETNQEAENAINEKTAMMWFLNREAPAGKIQHEEWLSIAKKHGLPTMIDLAADVPPVENLWKYNDMGFDLVCISGGKAICGPQSAGILMGKKDLIAAARLNGPPHGGNIGRGMKVNKEEIIGMYVALDTYVKTDHNKEWKMWEDRIAVINNAVKNISGVTTEIIIPPVANHSPSLEISWDNSKVKITRDAFAEKLRGGSPSIEVVSWEKENSIRLTVFMLKPRQEKIVASRIKEELLLASA

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
32 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
86 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
87 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
93 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
124 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
125 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
126 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
127 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
128 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
129 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
130 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
134 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
135 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
136 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
174 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
175 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
176 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
177 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
178 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
179 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
183 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
187 2738541278 Niastella sp. CF465 Isolate Unclassified
188 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
189 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
190 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
191 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
192 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
193 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
194 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.27
Metatranscriptomes 0
Isolates 3.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.53
Nodule 0
Rhizoplane 0.68
Rhizosphere 77.97
Stem 0
Stem Tuber 0
Unclassified 14.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100037147 3300005355 Bacteria 4039
2 JGI24740J21852_10003904 3300001979 Bacteria 6470
3 JGI25154J39366_1000003 3300002738 Bacteria 397627
4 JGI25153J46596_10007192 3300003215 Bacteria 5518
5 rootH1_10037346 3300003316 Bacteria 9326
6 rootH1_10094283 3300003316 Bacteria 3608
7 rootH1_10095890 3300003316 Bacteria 1531
8 rootH2_10049809 3300003320 Bacteria 3048
9 rootL2_10004365 3300003322 Unclassified 3667
10 rootL2_10011654 3300003322 Bacteria 20378
11 rootL2_10069245 3300003322 Bacteria 16981
12 rootH1_10053361 3300003323 Bacteria 10198
13 rootH1_10066362 3300003323 Bacteria 2514
14 rootH1_10078183 3300003323 Bacteria 9630
15 rootH1_10167180 3300003323 Bacteria 1984
16 JGI25160J50197_1014535 3300003354 Unclassified 2629
17 Ga0055535_1001734 3300003761 Bacteria 9786
18 Ga0055528_1000180 3300003790 Bacteria 53597
19 Ga0055528_1000828 3300003790 Bacteria 21193
20 Ga0055530_10001406 3300003791 Bacteria 17709
21 Ga0055531_10000293 3300003794 Bacteria 49990
22 Ga0065165_1000019 3300005262 Bacteria 271815
23 Ga0065165_1000446 3300005262 Bacteria 64848
24 Ga0065165_1006744 3300005262 Bacteria 5886
25 Ga0070658_10057261 3300005327 Bacteria 3170
26 Ga0070658_10069732 3300005327 Unclassified 2877
27 Ga0070658_10170485 3300005327 Bacteria 1828
28 Ga0070676_10012753 3300005328 Bacteria 4597
29 Ga0070676_10020393 3300005328 Bacteria 3699
30 Ga0070683_100024230 3300005329 Bacteria 5433
31 Ga0070683_100085109 3300005329 Bacteria 2963
32 Ga0068869_100017617 3300005334 Bacteria 4846
33 Ga0068869_100040248 3300005334 Bacteria 3341
34 Ga0070680_100013443 3300005336 Bacteria 6375
35 Ga0070680_100126181 3300005336 Bacteria 2138
36 Ga0070682_100001913 3300005337 Bacteria 11617
37 Ga0070682_100089817 3300005337 Unclassified 2008
38 Ga0068868_100049528 3300005338 Bacteria 3297
39 Ga0070660_100008453 3300005339 Bacteria 7199
40 Ga0070689_100025138 3300005340 Bacteria 4472
41 Ga0070691_10015034 3300005341 Bacteria 3554
42 Ga0070661_100020604 3300005344 Bacteria 4704
43 Ga0070661_100219295 3300005344 Unclassified 1459
44 Ga0070669_100194254 3300005353 Unclassified 1593
45 Ga0070669_100259478 3300005353 Unclassified 1386
46 Ga0070671_100223425 3300005355 Bacteria 1598
47 Ga0070674_100119877 3300005356 Bacteria 1946
48 Ga0070673_100160104 3300005364 Bacteria 1914
49 Ga0070659_100254890 3300005366 Bacteria 1455
50 Ga0070667_100047555 3300005367 Bacteria 3609
51 Ga0070701_10114964 3300005438 Bacteria 1508
52 Ga0070708_100041876 3300005445 Unclassified 4018
53 Ga0070708_100092375 3300005445 Bacteria 2757
54 Ga0070678_100086977 3300005456 Unclassified 2386
55 Ga0070662_100069461 3300005457 Unclassified 2592
56 Ga0070681_10027249 3300005458 Bacteria 5746
57 Ga0070707_100000093 3300005468 Bacteria 80391
58 Ga0070679_100007289 3300005530 Bacteria 10329
59 Ga0070679_100050273 3300005530 Bacteria 4153
60 Ga0070679_100073732 3300005530 Bacteria 3404
61 Ga0070679_100172503 3300005530 Bacteria 2136
62 Ga0070684_100001351 3300005535 Bacteria 17565
63 Ga0070684_100034070 3300005535 Bacteria 4352
64 Ga0068853_100006663 3300005539 Bacteria 9198
65 Ga0070695_100021247 3300005545 Bacteria 3969
66 Ga0070693_100012036 3300005547 Bacteria 4368
67 Ga0070665_100240225 3300005548 Bacteria 1812
68 Ga0068855_100020741 3300005563 Bacteria 7881
69 Ga0068855_100127392 3300005563 Unclassified 2910
70 Ga0070664_100062596 3300005564 Bacteria 3172
71 Ga0068857_100002525 3300005577 Bacteria 14977
72 Ga0068857_100074336 3300005577 Bacteria 3028
73 Ga0068856_100115710 3300005614 Unclassified 2681
74 Ga0068852_100075654 3300005616 Bacteria 2970
75 Ga0068859_100007899 3300005617 Bacteria 10796
76 Ga0068859_100118954 3300005617 Bacteria 2708
77 Ga0068860_100271397 3300005843 Bacteria 1656
78 Ga0068860_100274523 3300005843 Bacteria 1646
79 Ga0068862_100050179 3300005844 Bacteria 3565
80 Ga0097621_100004035 3300006237 Bacteria 10182
81 Ga0097621_100220432 3300006237 Unclassified 1653
82 Ga0068871_100013659 3300006358 Bacteria 6032
83 Ga0068871_100155339 3300006358 Bacteria 1953
84 Ga0075428_100027318 3300006844 Bacteria 6316
85 Ga0075430_100017323 3300006846 Bacteria 6136
86 Ga0075431_100045001 3300006847 Unclassified 4550
87 Ga0075431_100051024 3300006847 Bacteria 4266
88 Ga0075433_10059091 3300006852 Bacteria 3354
89 Ga0075434_100041385 3300006871 Bacteria 4566
90 Ga0075434_100303652 3300006871 Unclassified 1616
91 Ga0075429_100030879 3300006880 Bacteria 4657
92 Ga0068865_100085047 3300006881 Bacteria 2281
93 Ga0068865_100127609 3300006881 Unclassified 1901
94 Ga0075436_100010815 3300006914 Bacteria 6261
95 Ga0075436_100035674 3300006914 Bacteria 3430
96 Ga0097620_100007899 3300006931 Bacteria 10796
97 Ga0097620_100118950 3300006931 Bacteria 2708
98 Ga0105240_10000119 3300009093 Bacteria 163675
99 Ga0105240_10076403 3300009093 Bacteria 4129
100 Ga0105240_10408395 3300009093 Unclassified 1528
101 Ga0111539_10005518 3300009094 Bacteria 16365
102 Ga0111539_10009818 3300009094 Bacteria 12081
103 Ga0111539_10174152 3300009094 Bacteria 2514
104 Ga0114129_10027658 3300009147 Bacteria 8030
105 Ga0114129_10039979 3300009147 Bacteria 6616
106 Ga0114129_10143682 3300009147 Bacteria 3269
107 Ga0114129_10356353 3300009147 Unclassified 1937
108 Ga0105241_10000682 3300009174 Bacteria 25606
109 Ga0105241_10139469 3300009174 Bacteria 1972
110 Ga0105242_10045857 3300009176 Bacteria 3544
111 Ga0105242_10176148 3300009176 Unclassified 1883
112 Ga0105237_10158958 3300009545 Bacteria 2257
113 Ga0105237_10270347 3300009545 Unclassified 1703
114 Ga0105239_10000097 3300010375 Bacteria 122808
115 Ga0105239_10196061 3300010375 Unclassified 2262
116 Ga0157373_10000127 3300013100 Bacteria 59397
117 Ga0157373_10013019 3300013100 Bacteria 6104
118 Ga0157373_10037344 3300013100 Bacteria 3482
119 Ga0157370_10013145 3300013104 Bacteria 8539
120 Ga0157370_10095271 3300013104 Bacteria 2793
121 Ga0157369_10035752 3300013105 Bacteria 5446
122 Ga0157369_10096473 3300013105 Unclassified 3154
123 Ga0157374_10008317 3300013296 Bacteria 8854
124 Ga0157374_10296841 3300013296 Bacteria 1598
125 Ga0157378_10224524 3300013297 Bacteria 1787
126 Ga0163162_10055995 3300013306 Unclassified 3972
127 Ga0163162_10253402 3300013306 Bacteria 1892
128 Ga0157372_10122445 3300013307 Bacteria 2989
129 Ga0157375_10088247 3300013308 Bacteria 3155
130 Ga0157375_10320917 3300013308 Unclassified 1714
131 Ga0163163_10026253 3300014325 Bacteria 5564
132 Ga0163163_10061385 3300014325 Bacteria 3724
133 Ga0157380_10004696 3300014326 Bacteria 9512
134 Ga0157380_10303780 3300014326 Bacteria 1471
135 Ga0157377_10030966 3300014745 Bacteria 2904
136 Ga0157379_10110673 3300014968 Unclassified 2467
137 Ga0157379_10132965 3300014968 Bacteria 2240
138 Ga0157376_10020027 3300014969 Bacteria 5167
139 Ga0157376_10046287 3300014969 Bacteria 3587
140 Ga0182005_1000331 3300015265 Bacteria 27698
141 Ga0163161_10000496 3300017792 Bacteria 32389
142 Ga0209258_100247 3300025242 Bacteria 99442
143 Ga0209646_1000004 3300025246 Bacteria 786587
144 Ga0209026_1000132 3300025250 Bacteria 119048
145 Ga0209148_1000207 3300025254 Bacteria 104094
146 Ga0209673_1000042 3300025273 Bacteria 300704
147 Ga0209676_1000334 3300025292 Bacteria 90392
148 Ga0209564_1015138 3300025295 Bacteria 3157
149 Ga0209050_1000308 3300025298 Bacteria 99516
150 Ga0207426_1000316 3300025302 Bacteria 94148
151 Ga0207426_1008388 3300025302 Bacteria 4181
152 Ga0209257_1000025 3300025304 Bacteria 724838
153 Ga0209257_1001319 3300025304 Bacteria 30187
154 Ga0207647_10048038 3300025904 Bacteria 2652
155 Ga0207645_10021945 3300025907 Bacteria 4159
156 Ga0207705_10029789 3300025909 Bacteria 3891
157 Ga0207705_10068966 3300025909 Unclassified 2561
158 Ga0207654_10041821 3300025911 Unclassified 2590
159 Ga0207707_10000856 3300025912 Bacteria 29710
160 Ga0207695_10020112 3300025913 Bacteria 7658
161 Ga0207671_10175425 3300025914 Unclassified 1666
162 Ga0207660_10003311 3300025917 Bacteria 10522
163 Ga0207657_10029219 3300025919 Bacteria 5020
164 Ga0207657_10042667 3300025919 Bacteria 4000
165 Ga0207657_10117714 3300025919 Bacteria 2188
166 Ga0207657_10225263 3300025919 Bacteria 1501
167 Ga0207652_10020464 3300025921 Bacteria 5448
168 Ga0207652_10244570 3300025921 Bacteria 1617
169 Ga0207646_10000177 3300025922 Bacteria 86754
170 Ga0207681_10092914 3300025923 Unclassified 2158
171 Ga0207650_10241815 3300025925 Unclassified 1459
172 Ga0207659_10123310 3300025926 Bacteria 1989
173 Ga0207690_10062839 3300025932 Bacteria 2530
174 Ga0207690_10207416 3300025932 Bacteria 1492
175 Ga0207670_10034771 3300025936 Bacteria 3261
176 Ga0207704_10090311 3300025938 Bacteria 2010
177 Ga0207689_10073431 3300025942 Unclassified 2810
178 Ga0207689_10130960 3300025942 Bacteria 2065
179 Ga0207667_10042930 3300025949 Bacteria 4801
180 Ga0207677_10010903 3300026023 Bacteria 5160
181 Ga0207677_10078251 3300026023 Bacteria 2361
182 Ga0207677_10253392 3300026023 Bacteria 1431
183 Ga0207703_10153018 3300026035 Bacteria 2013
184 Ga0207639_10013216 3300026041 Bacteria 5772
185 Ga0207639_10133704 3300026041 Bacteria 2057
186 Ga0207639_10337099 3300026041 Unclassified 1343
187 Ga0207702_10042485 3300026078 Unclassified 3813
188 Ga0207641_10229966 3300026088 Bacteria 1723
189 Ga0207674_10003748 3300026116 Bacteria 18541
190 Ga0207674_10012296 3300026116 Bacteria 9570
191 Ga0207674_10013659 3300026116 Bacteria 8993
192 Ga0207683_10105251 3300026121 Unclassified 2522
193 Ga0207428_10228408 3300027907 Bacteria 1393
194 Ga0268265_10004899 3300028380 Bacteria 9214
195 Ga0268265_10066379 3300028380 Bacteria 2789
196 Ga0268264_10151394 3300028381 Bacteria 2080
197 Ga0268264_10169045 3300028381 Bacteria 1976
198 Ga0307515_10003343 3300028794 Bacteria 33898
199 Ga0307511_10000263 3300030521 Bacteria 54309
200 Ga0265327_10016463 3300031251 Bacteria 4693
201 Ga0307513_10055865 3300031456 Bacteria 4221
202 Ga0307508_10002356 3300031616 Bacteria 19994
203 Ga0316576_10008112 3300031727 Bacteria 6666
204 Ga0307516_10030416 3300031730 Bacteria 5448
205 Ga0307405_10002973 3300031731 Bacteria 7661
206 Ga0307407_10199119 3300031903 Unclassified 1341
207 Ga0307412_10035326 3300031911 Bacteria 3193
208 Ga0307412_10069816 3300031911 Unclassified 2393
209 Ga0307414_10028393 3300032004 Bacteria 3629
210 Ga0373953_0025090 3300035117 Bacteria 2274
211 Ga0373927_0001547 3300035695 Bacteria 17272
212 Ga0451853_0392205 3300041512 Bacteria 1201
213 Ga0451577_0004124 3300042876 Bacteria 15578
214 Ga0451577_0005868 3300042876 Bacteria 12414
215 Ga0453683_0058905 3300044673 Bacteria 2402
216 Ga0453684_0000091 3300044712 Bacteria 387720
217 Ga0453684_0014694 3300044712 Bacteria 12481
218 Ga0453684_0035313 3300044712 Bacteria 6913
219 Ga0453684_0207678 3300044712 Bacteria 2278
220 Ga0451576_0003001 3300045051 Bacteria 23860
221 Ga0451576_0021734 3300045051 Bacteria 6967
222 Ga0451576_0028053 3300045051 Bacteria 6035
223 Ga0451576_0033460 3300045051 Bacteria 5464
224 Ga0451576_0131199 3300045051 Bacteria 2612
225 Ga0495638_0000005 3300046460 Bacteria 680627
226 Ga0495632_0112002 3300046519 Unclassified 1281
227 Ga0495609_0004564 3300046538 Bacteria 7530
228 Ga0495633_0000005 3300046558 Bacteria 357644
229 Ga0495611_0000042 3300046648 Bacteria 94996
230 Ga0496109_0000086 3300048912 Bacteria 95253
231 Ga0496111_0245668 3300048914 Unclassified 1329
232 Ga0496121_0000020 3300048924 Bacteria 498732
233 Ga0496126_0005216 3300048929 Bacteria 14994
234 Ga0501032_0024077 3300049569 Bacteria 4205
235 Ga0501033_0072378 3300049570 Bacteria 2531
236 Ga0501034_0005855 3300049571 Bacteria 13374
237 Ga0501034_0116631 3300049571 Bacteria 2658
238 Ga0501034_0126195 3300049571 Bacteria 2544
239 Ga0501037_0007756 3300049573 Bacteria 7857
240 Ga0501037_0074466 3300049573 Unclassified 2467
241 Ga0501038_0064463 3300049574 Bacteria 3124
242 Ga0501038_0097516 3300049574 Bacteria 2452
243 Ga0501043_0015356 3300049579 Bacteria 5998
244 Ga0501043_0084216 3300049579 Bacteria 2499
245 Ga0501047_0007943 3300049581 Bacteria 10006
246 Ga0501047_0017403 3300049581 Bacteria 6883
247 Ga0501068_0041137 3300049584 Bacteria 2777
248 Ga0501070_0016667 3300049586 Bacteria 6171
249 Ga0501073_0106415 3300049589 Bacteria 1946
250 Ga0501207_005761 3300049654 Bacteria 1723
251 Ga0501079_0105377 3300049741 Bacteria 2188
252 Ga0501241_000112 3300049758 Bacteria 17674
253 Ga0501035_0068627 3300049822 Bacteria 3143
254 Ga0501044_0024147 3300049823 Bacteria 6458
255 Ga0501044_0123464 3300049823 Bacteria 2588
256 nmdc:mga05p37_214676_c1 3300050507 Bacteria 2324
257 nmdc:mga05p37_24242_c1 3300050507 Bacteria 7372
258 nmdc:mga09592_6447_c1 3300050508 Bacteria 9558
259 nmdc:mga0qj67_50091_c1 3300050509 Bacteria 3301
260 nmdc:mga06r32_35155_c1 3300050510 Bacteria 4728
261 nmdc:mga06r32_9633_c1 3300050510 Bacteria 8727
262 nmdc:mga08y16_154120_c1 3300050511 Bacteria 2388
263 nmdc:mga08y16_17886_c1 3300050511 Bacteria 7467
264 nmdc:mga08y16_400559_c1 3300050511 Bacteria 1405
265 nmdc:mga08y16_62192_c1 3300050511 Bacteria 3898
266 nmdc:mga0n895_234603_c1 3300050512 Unclassified 1862
267 nmdc:mga08x19_25411_c1 3300050514 Bacteria 3689
268 nmdc:mga0a205_64544_c1 3300050515 Bacteria 3537
269 Ga0500644_0000737 3300053088 Bacteria 11433
270 Ga0500583_0019825 3300053092 Bacteria 2765
271 Ga0500651_0018734 3300053093 Bacteria 4288
272 Ga0500555_024146 3300053103 Bacteria 1742
273 Ga0500607_026915 3300053121 Unclassified 3194
274 Ga0500658_0012645 3300053134 Bacteria 3116
275 Ga0500577_0000931 3300053142 Bacteria 7596
276 Ga0500616_0000003 3300053153 Bacteria 1220687
277 Ga0500616_0009101 3300053153 Bacteria 6077
278 Ga0500616_0012028 3300053153 Bacteria 5081
279 Ga0500622_0000042 3300053156 Bacteria 161253
280 Ga0500622_0074465 3300053156 Bacteria 1710
281 Ga0500633_0023421 3300053160 Unclassified 1906
282 Ga0500636_0001637 3300053177 Bacteria 12228
283 Ga0501084_0022096 3300054114 Bacteria 5307
284 Ga0501082_0049377 3300060353 Bacteria 3628
285 2522548517 2522125168 Bacteria 7376607
286 2738731671 2738541278 Bacteria 9755573
287 2819573969 2818991442 Bacteria 8318214
288 2821137283 2821136567 Bacteria 8080116
289 2904467976 2904467357 Bacteria 8057758
290 2929241597 2929239360 Bacteria 7745570
291 2929922248 2929921140 Bacteria 8649150
292 8003154797 8003151029 Bacteria 8187759
293 8055589047 8055588893 Bacteria 3619545
294 8055590346 8055588893 Bacteria 3619545
295 8055591855 8055588893 Bacteria 3619545
296 Ga0070671_100037147
297 JGI24740J21852_10003904
298 JGI25154J39366_1000003
299 JGI25153J46596_10007192
300 rootH1_10037346
301 rootH1_10094283
302 rootH1_10095890
303 rootH2_10049809
304 rootL2_10004365
305 rootL2_10011654
306 rootL2_10069245
307 rootH1_10053361
308 rootH1_10066362
309 rootH1_10078183
310 rootH1_10167180
311 JGI25160J50197_1014535
312 Ga0055535_1001734
313 Ga0055528_1000180
314 Ga0055528_1000828
315 Ga0055530_10001406
316 Ga0055531_10000293
317 Ga0065165_1000019
318 Ga0065165_1000446
319 Ga0065165_1006744
320 Ga0070658_10057261
321 Ga0070658_10069732
322 Ga0070658_10170485
323 Ga0070676_10012753
324 Ga0070676_10020393
325 Ga0070683_100024230
326 Ga0070683_100085109
327 Ga0068869_100017617
328 Ga0068869_100040248
329 Ga0070680_100013443
330 Ga0070680_100126181
331 Ga0070682_100001913
332 Ga0070682_100089817
333 Ga0068868_100049528
334 Ga0070660_100008453
335 Ga0070689_100025138
336 Ga0070691_10015034
337 Ga0070661_100020604
338 Ga0070661_100219295
339 Ga0070669_100194254
340 Ga0070669_100259478
341 Ga0070671_100223425
342 Ga0070674_100119877
343 Ga0070673_100160104
344 Ga0070659_100254890
345 Ga0070667_100047555
346 Ga0070701_10114964
347 Ga0070708_100041876
348 Ga0070708_100092375
349 Ga0070678_100086977
350 Ga0070662_100069461
351 Ga0070681_10027249
352 Ga0070707_100000093
353 Ga0070679_100007289
354 Ga0070679_100050273
355 Ga0070679_100073732
356 Ga0070679_100172503
357 Ga0070684_100001351
358 Ga0070684_100034070
359 Ga0068853_100006663
360 Ga0070695_100021247
361 Ga0070693_100012036
362 Ga0070665_100240225
363 Ga0068855_100020741
364 Ga0068855_100127392
365 Ga0070664_100062596
366 Ga0068857_100002525
367 Ga0068857_100074336
368 Ga0068856_100115710
369 Ga0068852_100075654
370 Ga0068859_100007899
371 Ga0068859_100118954
372 Ga0068860_100271397
373 Ga0068860_100274523
374 Ga0068862_100050179
375 Ga0097621_100004035
376 Ga0097621_100220432
377 Ga0068871_100013659
378 Ga0068871_100155339
379 Ga0075428_100027318
380 Ga0075430_100017323
381 Ga0075431_100045001
382 Ga0075431_100051024
383 Ga0075433_10059091
384 Ga0075434_100041385
385 Ga0075434_100303652
386 Ga0075429_100030879
387 Ga0068865_100085047
388 Ga0068865_100127609
389 Ga0075436_100010815
390 Ga0075436_100035674
391 Ga0097620_100007899
392 Ga0097620_100118950
393 Ga0105240_10000119
394 Ga0105240_10076403
395 Ga0105240_10408395
396 Ga0111539_10005518
397 Ga0111539_10009818
398 Ga0111539_10174152
399 Ga0114129_10027658
400 Ga0114129_10039979
401 Ga0114129_10143682
402 Ga0114129_10356353
403 Ga0105241_10000682
404 Ga0105241_10139469
405 Ga0105242_10045857
406 Ga0105242_10176148
407 Ga0105237_10158958
408 Ga0105237_10270347
409 Ga0105239_10000097
410 Ga0105239_10196061
411 Ga0157373_10000127
412 Ga0157373_10013019
413 Ga0157373_10037344
414 Ga0157370_10013145
415 Ga0157370_10095271
416 Ga0157369_10035752
417 Ga0157369_10096473
418 Ga0157374_10008317
419 Ga0157374_10296841
420 Ga0157378_10224524
421 Ga0163162_10055995
422 Ga0163162_10253402
423 Ga0157372_10122445
424 Ga0157375_10088247
425 Ga0157375_10320917
426 Ga0163163_10026253
427 Ga0163163_10061385
428 Ga0157380_10004696
429 Ga0157380_10303780
430 Ga0157377_10030966
431 Ga0157379_10110673
432 Ga0157379_10132965
433 Ga0157376_10020027
434 Ga0157376_10046287
435 Ga0182005_1000331
436 Ga0163161_10000496
437 Ga0209258_100247
438 Ga0209646_1000004
439 Ga0209026_1000132
440 Ga0209148_1000207
441 Ga0209673_1000042
442 Ga0209676_1000334
443 Ga0209564_1015138
444 Ga0209050_1000308
445 Ga0207426_1000316
446 Ga0207426_1008388
447 Ga0209257_1000025
448 Ga0209257_1001319
449 Ga0207647_10048038
450 Ga0207645_10021945
451 Ga0207705_10029789
452 Ga0207705_10068966
453 Ga0207654_10041821
454 Ga0207707_10000856
455 Ga0207695_10020112
456 Ga0207671_10175425
457 Ga0207660_10003311
458 Ga0207657_10029219
459 Ga0207657_10042667
460 Ga0207657_10117714
461 Ga0207657_10225263
462 Ga0207652_10020464
463 Ga0207652_10244570
464 Ga0207646_10000177
465 Ga0207681_10092914
466 Ga0207650_10241815
467 Ga0207659_10123310
468 Ga0207690_10062839
469 Ga0207690_10207416
470 Ga0207670_10034771
471 Ga0207704_10090311
472 Ga0207689_10073431
473 Ga0207689_10130960
474 Ga0207667_10042930
475 Ga0207677_10010903
476 Ga0207677_10078251
477 Ga0207677_10253392
478 Ga0207703_10153018
479 Ga0207639_10013216
480 Ga0207639_10133704
481 Ga0207639_10337099
482 Ga0207702_10042485
483 Ga0207641_10229966
484 Ga0207674_10003748
485 Ga0207674_10012296
486 Ga0207674_10013659
487 Ga0207683_10105251
488 Ga0207428_10228408
489 Ga0268265_10004899
490 Ga0268265_10066379
491 Ga0268264_10151394
492 Ga0268264_10169045
493 Ga0307515_10003343
494 Ga0307511_10000263
495 Ga0265327_10016463
496 Ga0307513_10055865
497 Ga0307508_10002356
498 Ga0316576_10008112
499 Ga0307516_10030416
500 Ga0307405_10002973
501 Ga0307407_10199119
502 Ga0307412_10035326
503 Ga0307412_10069816
504 Ga0307414_10028393
505 Ga0373953_0025090
506 Ga0373927_0001547
507 Ga0451853_0392205
508 Ga0451577_0004124
509 Ga0451577_0005868
510 Ga0453683_0058905
511 Ga0453684_0000091
512 Ga0453684_0014694
513 Ga0453684_0035313
514 Ga0453684_0207678
515 Ga0451576_0003001
516 Ga0451576_0021734
517 Ga0451576_0028053
518 Ga0451576_0033460
519 Ga0451576_0131199
520 Ga0495638_0000005
521 Ga0495632_0112002
522 Ga0495609_0004564
523 Ga0495633_0000005
524 Ga0495611_0000042
525 Ga0496109_0000086
526 Ga0496111_0245668
527 Ga0496121_0000020
528 Ga0496126_0005216
529 Ga0501032_0024077
530 Ga0501033_0072378
531 Ga0501034_0005855
532 Ga0501034_0116631
533 Ga0501034_0126195
534 Ga0501037_0007756
535 Ga0501037_0074466
536 Ga0501038_0064463
537 Ga0501038_0097516
538 Ga0501043_0015356
539 Ga0501043_0084216
540 Ga0501047_0007943
541 Ga0501047_0017403
542 Ga0501068_0041137
543 Ga0501070_0016667
544 Ga0501073_0106415
545 Ga0501207_005761
546 Ga0501079_0105377
547 Ga0501241_000112
548 Ga0501035_0068627
549 Ga0501044_0024147
550 Ga0501044_0123464
551 nmdc:mga05p37_214676_c1
552 nmdc:mga05p37_24242_c1
553 nmdc:mga09592_6447_c1
554 nmdc:mga0qj67_50091_c1
555 nmdc:mga06r32_35155_c1
556 nmdc:mga06r32_9633_c1
557 nmdc:mga08y16_154120_c1
558 nmdc:mga08y16_17886_c1
559 nmdc:mga08y16_400559_c1
560 nmdc:mga08y16_62192_c1
561 nmdc:mga0n895_234603_c1
562 nmdc:mga08x19_25411_c1
563 nmdc:mga0a205_64544_c1
564 Ga0500644_0000737
565 Ga0500583_0019825
566 Ga0500651_0018734
567 Ga0500555_024146
568 Ga0500607_026915
569 Ga0500658_0012645
570 Ga0500577_0000931
571 Ga0500616_0000003
572 Ga0500616_0009101
573 Ga0500616_0012028
574 Ga0500622_0000042
575 Ga0500622_0074465
576 Ga0500633_0023421
577 Ga0500636_0001637
578 Ga0501084_0022096
579 Ga0501082_0049377
580 2522548517
581 2738731671
582 2819573969
583 2821137283
584 2904467976
585 2929241597
586 2929922248
587 8003154797
588 8055589047
589 8055590346
590 8055591855

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

168

316

0.87

PF03841

SelA

L-seryl-tRNA selenium transferase

179

434

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
8t7j-assembly1.cif.gz_D-2 oxygen- and plp-dependent cap15 holoenzyme bound with phosphate anion 0.8998 42 402
8t7j-assembly1.cif.gz_A-2 oxygen- and plp-dependent cap15 holoenzyme bound with phosphate anion 0.8904 42 403
8t7j-assembly1.cif.gz_B-2 oxygen- and plp-dependent cap15 holoenzyme bound with phosphate anion 0.887 42 403
8t7j-assembly1.cif.gz_D-2 oxygen- and plp-dependent cap15 holoenzyme bound with phosphate anion 0.8854 42 402
8t7j-assembly1.cif.gz_C-2 oxygen- and plp-dependent cap15 holoenzyme bound with phosphate anion 0.8849 42 402
ID Description Score Start End Superfamily
af_Q2G120_12_246_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7793 86 296 3.40.640.10
3wcnB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7637 63 299 3.40.640.10
1pffB01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7634 90 296 3.40.640.10
1gc2B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7596 75 296 3.40.640.10
af_Q4DPG7_54_250_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7523 142 216 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A537JVQ0-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9858 115 408 GO:0004125
GO:0008483
AF-A0A7X3VIN4-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9834 60 406 GO:0004125
GO:0008483
AF-A0A7X3VIN4-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9778 60 406 GO:0004125
GO:0008483
AF-A0A2V9PWI9-F1-model_v4 Selenocysteine synthase 0.9774 103 409 GO:0004125
AF-A0A356IEK3-F1-model_v4 Selenocysteine synthase 0.976 145 409 GO:0004125

Map