F392428

General Info

Members Datasets Scaffolds Average Seq Length
295 208 590 168

Family's Representative Sequence

Representative Sequence 3300003203|JGI25406J46586_10013412|JGI25406J46586_100134122
Length 172
Sequence MSREESAAAAVRELLGELDLAWSEHRPGLFSVSLPGTRKLATECALEVGRHALQVRAFVARRPDENHTAVYRWLLERNLRLYGIAFCLDALGDIYLSARLSLAAVTAAEVDRILGAVAQTADDSFNTILELGFAASIQREWVWRRSRGESTANLAAFAHLDPGDGPPLGSQP

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
85 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
86 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
87 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
88 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
89 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
90 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
97 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
98 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
99 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
100 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
101 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
102 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
103 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
108 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
109 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
110 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
154 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
155 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
156 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
157 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
158 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
159 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
160 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 2501939600 Micromonospora sp. L5 Isolate Unclassified
164 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
165 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
166 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
167 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
168 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
169 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
170 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
171 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
172 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
173 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
174 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
175 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
176 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
177 2855683550 Micromonospora sp. RP3T Isolate Unclassified
178 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
179 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
180 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
181 2858868258 Micromonospora sp. MH33 Isolate Unclassified
182 2858882152 Micromonospora noduli MED15 Isolate Nodule
183 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
184 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
185 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
186 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
187 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
188 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
189 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
190 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
191 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
192 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
193 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
194 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
195 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
196 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
197 2902582711 Micromonospora sp. AP08 Isolate Unclassified
198 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
199 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
200 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
201 649633069 Micromonospora sp. L5 Isolate Unclassified
202 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
203 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
204 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
205 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
206 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
207 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
208 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.71
Metatranscriptomes 1.69
Isolates 15.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.39
Nodule 2.03
Rhizoplane 4.07
Rhizosphere 73.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10013412 3300003203 Bacteria 3520
2 JGI25406J46586_10111990 3300003203 Bacteria 807
3 rootL2_10227847 3300003322 Bacteria 1420
4 Ga0068869_101033444 3300005334 Bacteria 717
5 Ga0070680_100001033 3300005336 Bacteria 19935
6 Ga0070680_100448400 3300005336 Bacteria 1102
7 Ga0070682_100378650 3300005337 Bacteria 1064
8 Ga0070682_100493075 3300005337 Bacteria 947
9 Ga0068868_100249384 3300005338 Bacteria 1494
10 Ga0070661_100055767 3300005344 Bacteria 2893
11 Ga0070661_100338862 3300005344 Bacteria 1178
12 Ga0070661_100525401 3300005344 Bacteria 950
13 Ga0070661_101078268 3300005344 Bacteria 669
14 Ga0070668_100064654 3300005347 Bacteria 2836
15 Ga0070669_100494297 3300005353 Bacteria 1014
16 Ga0070659_100020409 3300005366 Bacteria 5032
17 Ga0070714_100135175 3300005435 Bacteria 2207
18 Ga0070713_100030945 3300005436 Bacteria 4256
19 Ga0070681_10001524 3300005458 Bacteria 20537
20 Ga0070681_10474595 3300005458 Bacteria 1163
21 Ga0070679_100008918 3300005530 Bacteria 9463
22 Ga0070679_100135401 3300005530 Bacteria 2445
23 Ga0070679_100164514 3300005530 Bacteria 2192
24 Ga0070679_100181562 3300005530 Bacteria 2076
25 Ga0070684_100059505 3300005535 Bacteria 3340
26 Ga0070684_100060634 3300005535 Bacteria 3310
27 Ga0070684_100231464 3300005535 Bacteria 1687
28 Ga0068855_100140816 3300005563 Bacteria 2750
29 Ga0068857_100073457 3300005577 Bacteria 3047
30 Ga0068856_100988882 3300005614 Bacteria 860
31 Ga0068852_100618978 3300005616 Bacteria 1088
32 Ga0068852_102112592 3300005616 Bacteria 585
33 Ga0068851_10363766 3300005834 Bacteria 844
34 Ga0068863_100544889 3300005841 Bacteria 1145
35 Ga0068858_100110046 3300005842 Bacteria 2572
36 Ga0068858_101922376 3300005842 Bacteria 585
37 Ga0068860_100127818 3300005843 Bacteria 2436
38 Ga0081539_10000015 3300005985 Bacteria 395781
39 Ga0081539_10000094 3300005985 Bacteria 206102
40 Ga0081539_10003266 3300005985 Bacteria 20350
41 Ga0081539_10004844 3300005985 Bacteria 14410
42 Ga0075364_10772638 3300006051 Bacteria 655
43 Ga0075430_100162803 3300006846 Bacteria 1857
44 Ga0111539_10567348 3300009094 Bacteria 1322
45 Ga0105245_10042731 3300009098 Bacteria 4043
46 Ga0105245_10387797 3300009098 Bacteria 1393
47 Ga0105245_10736122 3300009098 Bacteria 1021
48 Ga0105247_10147310 3300009101 Bacteria 1548
49 Ga0105247_10455185 3300009101 Bacteria 923
50 Ga0114129_10216519 3300009147 Bacteria 2586
51 Ga0105243_12393694 3300009148 Bacteria 566
52 Ga0105237_10629490 3300009545 Bacteria 1080
53 Ga0105238_11184930 3300009551 Bacteria 788
54 Ga0105239_10491931 3300010375 Bacteria 1394
55 Ga0157370_10266518 3300013104 Bacteria 1583
56 Ga0157369_10107440 3300013105 Bacteria 2969
57 Ga0157369_10798076 3300013105 Bacteria 970
58 Ga0157378_10629736 3300013297 Bacteria 1086
59 Ga0157372_10228924 3300013307 Bacteria 2155
60 Ga0157372_10263628 3300013307 Bacteria 2001
61 Ga0157375_10448498 3300013308 Bacteria 1456
62 Ga0157377_10710181 3300014745 Bacteria 731
63 Ga0157376_10927475 3300014969 Bacteria 890
64 Ga0206351_10797260 3300020077 Bacteria 811
65 Ga0206350_11637565 3300020080 Bacteria 910
66 Ga0206353_10148830 3300020082 Bacteria 9958
67 Ga0206353_10392973 3300020082 Bacteria 1635
68 Ga0206353_11233292 3300020082 Bacteria 10621
69 Ga0207688_10322107 3300025901 Bacteria 948
70 Ga0207705_10004026 3300025909 Bacteria 11180
71 Ga0207705_10029078 3300025909 Bacteria 3940
72 Ga0207707_10005298 3300025912 Bacteria 11282
73 Ga0207660_10003509 3300025917 Bacteria 10215
74 Ga0207660_10043995 3300025917 Bacteria 3140
75 Ga0207660_10305390 3300025917 Bacteria 1268
76 Ga0207660_10483248 3300025917 Bacteria 1004
77 Ga0207649_10050646 3300025920 Bacteria 2569
78 Ga0207649_10403374 3300025920 Bacteria 1023
79 Ga0207649_11342801 3300025920 Bacteria 566
80 Ga0207652_10004033 3300025921 Bacteria 11985
81 Ga0207652_10103637 3300025921 Bacteria 2515
82 Ga0207652_10869691 3300025921 Bacteria 797
83 Ga0207694_10659125 3300025924 Bacteria 882
84 Ga0207687_10166425 3300025927 Bacteria 1696
85 Ga0207687_10193096 3300025927 Bacteria 1586
86 Ga0207687_10495442 3300025927 Bacteria 1019
87 Ga0207700_10062459 3300025928 Bacteria 2830
88 Ga0207664_10827724 3300025929 Bacteria 832
89 Ga0207644_10418355 3300025931 Bacteria 1098
90 Ga0207665_10246213 3300025939 Bacteria 1319
91 Ga0207661_11118237 3300025944 Bacteria 725
92 Ga0207679_10295054 3300025945 Bacteria 1395
93 Ga0207679_10400815 3300025945 Bacteria 1207
94 Ga0207668_10010343 3300025972 Bacteria 5636
95 Ga0207668_10027395 3300025972 Bacteria 3711
96 Ga0207658_10038433 3300025986 Bacteria 3448
97 Ga0207703_11774677 3300026035 Bacteria 593
98 Ga0207678_10928548 3300026067 Bacteria 770
99 Ga0207676_10499447 3300026095 Bacteria 1155
100 Ga0207676_10668513 3300026095 Bacteria 1004
101 Ga0207674_10111720 3300026116 Bacteria 2707
102 Ga0207674_10988965 3300026116 Bacteria 810
103 Ga0207675_100402061 3300026118 Bacteria 1350
104 Ga0207698_10978567 3300026142 Bacteria 856
105 Ga0207698_12181199 3300026142 Bacteria 567
106 Ga0268266_10530203 3300028379 Bacteria 1127
107 Ga0268265_10121458 3300028380 Bacteria 2153
108 Ga0268264_10110501 3300028381 Bacteria 2407
109 Ga0307515_10035614 3300028794 Bacteria 8087
110 Ga0307515_10047545 3300028794 Bacteria 6518
111 Ga0307515_10117653 3300028794 Bacteria 3040
112 Ga0307512_10010211 3300030522 Bacteria 8970
113 Ga0307513_10006290 3300031456 Bacteria 15551
114 Ga0307513_10042977 3300031456 Bacteria 4969
115 Ga0307513_10122722 3300031456 Bacteria 2561
116 Ga0307513_10498059 3300031456 Bacteria 936
117 Ga0307509_10034875 3300031507 Bacteria 5526
118 Ga0307408_100060450 3300031548 Bacteria 2762
119 Ga0307508_10007466 3300031616 Bacteria 10178
120 Ga0307508_10032765 3300031616 Bacteria 4692
121 Ga0307516_10000149 3300031730 Bacteria 86821
122 Ga0307516_10278231 3300031730 Bacteria 1356
123 Ga0307405_10061968 3300031731 Bacteria 2366
124 Ga0307410_10583841 3300031852 Bacteria 930
125 Ga0307410_10593029 3300031852 Bacteria 923
126 Ga0307407_10084501 3300031903 Bacteria 1928
127 Ga0307407_10324622 3300031903 Bacteria 1081
128 Ga0307412_10788189 3300031911 Bacteria 824
129 Ga0307409_100353611 3300031995 Bacteria 1387
130 Ga0307409_100982648 3300031995 Bacteria 861
131 Ga0307411_10118163 3300032005 Bacteria 1912
132 Ga0307411_10512032 3300032005 Bacteria 1017
133 Ga0307415_100009430 3300032126 Bacteria 5470
134 Ga0307507_10000009 3300033179 Bacteria 265992
135 Ga0307507_10140462 3300033179 Bacteria 1854
136 Ga0373948_0091238 3300034817 Bacteria 707
137 Ga0373940_0000391 3300035088 Bacteria 6649
138 Ga0373951_0000148 3300035091 Bacteria 25725
139 Ga0373932_0012277 3300035112 Bacteria 2107
140 Ga0373942_0000067 3300035207 Bacteria 21955
141 Ga0373962_0000754 3300035242 Bacteria 7368
142 Ga0373935_0002586 3300035692 Bacteria 10397
143 Ga0395900_0008498 3300037418 Bacteria 10554
144 Ga0395900_0033582 3300037418 Bacteria 5280
145 Ga0395900_0175105 3300037418 Bacteria 2182
146 Ga0395898_0030317 3300037466 Bacteria 5413
147 Ga0395898_0033552 3300037466 Bacteria 5121
148 Ga0395898_0502551 3300037466 Bacteria 1153
149 Ga0395905_0107157 3300037471 Bacteria 2624
150 Ga0395901_0002722 3300038443 Bacteria 17814
151 Ga0395901_0002968 3300038443 Bacteria 17114
152 Ga0395901_0158126 3300038443 Bacteria 2380
153 Ga0451791_1260946 3300041451 Bacteria 1301
154 Ga0451791_1402988 3300041451 Bacteria 614
155 Ga0451807_2183617 3300041486 Bacteria 743
156 Ga0451833_0530581 3300041491 Bacteria 903
157 Ga0451841_0533487 3300041498 Bacteria 1100
158 Ga0451841_0717964 3300041498 Bacteria 2055
159 Ga0451851_0466824 3300041507 Bacteria 833
160 Ga0451843_0522220 3300041509 Bacteria 976
161 Ga0451853_0834473 3300041512 Bacteria 3611
162 Ga0466965_0081826 3300044683 Bacteria 1633
163 Ga0466966_0027795 3300044684 Bacteria 3688
164 Ga0466961_0055164 3300044693 Bacteria 2534
165 Ga0466961_0095552 3300044693 Bacteria 1874
166 Ga0466961_0538261 3300044693 Bacteria 704
167 Ga0466963_0240862 3300044694 Bacteria 1268
168 Ga0466964_0211190 3300044706 Bacteria 937
169 Ga0466971_0028979 3300044719 Bacteria 2476
170 Ga0466971_0122979 3300044719 Bacteria 1202
171 Ga0466968_0393401 3300044735 Bacteria 678
172 Ga0466970_0028812 3300044765 Bacteria 2920
173 Ga0466970_0402581 3300044765 Bacteria 781
174 Ga0466957_0034649 3300044842 Bacteria 3028
175 Ga0466957_0081218 3300044842 Bacteria 2019
176 Ga0466957_0206841 3300044842 Bacteria 1291
177 Ga0466957_0748888 3300044842 Bacteria 692
178 Ga0466960_0019008 3300044901 Bacteria 3020
179 Ga0466960_0155557 3300044901 Bacteria 1224
180 Ga0466960_0254381 3300044901 Bacteria 977
181 Ga0466960_0268584 3300044901 Bacteria 953
182 Ga0466959_0023080 3300045049 Bacteria 4602
183 Ga0466959_0120248 3300045049 Bacteria 1868
184 Ga0466959_0131833 3300045049 Bacteria 1771
185 Ga0466959_0230263 3300045049 Bacteria 1283
186 Ga0466958_0541397 3300045836 Bacteria 756
187 Ga0466967_0019369 3300045976 Bacteria 5470
188 Ga0466967_0025215 3300045976 Bacteria 4900
189 Ga0466967_0100458 3300045976 Bacteria 2643
190 Ga0466967_0161994 3300045976 Bacteria 2100
191 Ga0466967_0657353 3300045976 Bacteria 1037
192 Ga0495651_0070260 3300046462 Bacteria 2665
193 Ga0495594_0017052 3300046499 Bacteria 3833
194 Ga0495628_0645957 3300046516 Bacteria 752
195 Ga0495632_0066659 3300046519 Bacteria 1737
196 Ga0496108_0000019 3300048911 Bacteria 234657
197 Ga0496108_0006680 3300048911 Bacteria 9340
198 Ga0496109_0040558 3300048912 Bacteria 4217
199 Ga0496109_0685887 3300048912 Bacteria 962
200 Ga0496110_0015826 3300048913 Bacteria 6289
201 Ga0496110_0295798 3300048913 Bacteria 1475
202 Ga0496112_0068061 3300048915 Bacteria 3516
203 Ga0496114_0209269 3300048917 Bacteria 1710
204 Ga0496114_0242614 3300048917 Bacteria 1585
205 Ga0501031_0006446 3300049568 Bacteria 7651
206 Ga0501031_0091268 3300049568 Bacteria 1987
207 Ga0501032_0000310 3300049569 Bacteria 41007
208 Ga0501032_0123770 3300049569 Bacteria 1709
209 Ga0501033_0000285 3300049570 Bacteria 48668
210 Ga0501033_0568013 3300049570 Bacteria 780
211 Ga0501034_0351300 3300049571 Bacteria 1403
212 Ga0501036_0000324 3300049572 Bacteria 33202
213 Ga0501037_0001299 3300049573 Bacteria 18368
214 Ga0501038_0001284 3300049574 Bacteria 22830
215 Ga0501038_0086499 3300049574 Bacteria 2633
216 Ga0501039_0000313 3300049575 Bacteria 34198
217 Ga0501039_0070678 3300049575 Bacteria 2712
218 Ga0501040_0215831 3300049576 Bacteria 1364
219 Ga0501042_0035150 3300049578 Bacteria 3555
220 Ga0501043_0003146 3300049579 Bacteria 13656
221 Ga0501046_0000564 3300049580 Bacteria 36750
222 Ga0501046_0031317 3300049580 Bacteria 4313
223 Ga0501048_0000619 3300049582 Bacteria 25302
224 Ga0501069_0001362 3300049585 Bacteria 12003
225 Ga0501070_0134835 3300049586 Bacteria 2039
226 Ga0501073_0000623 3300049589 Bacteria 24925
227 Ga0501074_0000452 3300049590 Bacteria 24605
228 Ga0501076_0641763 3300049592 Bacteria 876
229 Ga0501079_0551651 3300049741 Bacteria 906
230 Ga0501080_0001037 3300049742 Bacteria 22835
231 Ga0501081_0590732 3300049743 Bacteria 831
232 Ga0501083_0006529 3300049744 Bacteria 8272
233 Ga0501035_0104840 3300049822 Bacteria 2479
234 Ga0501044_0185201 3300049823 Bacteria 2047
235 Ga0501045_0411706 3300049824 Bacteria 1006
236 nmdc:mga05p37_446368_c1 3300050507 Bacteria 1498
237 nmdc:mga08y16_711196_c1 3300050511 Bacteria 1003
238 nmdc:mga0a205_467421_c1 3300050515 Bacteria 1120
239 Ga0500644_0020080 3300053088 Bacteria 1981
240 Ga0500644_0033156 3300053088 Bacteria 1656
241 Ga0500646_0049024 3300053090 Bacteria 1213
242 Ga0500562_073222 3300053108 Bacteria 925
243 Ga0500569_036788 3300053109 Bacteria 1411
244 Ga0500594_0016692 3300053118 Bacteria 1787
245 Ga0500579_032542 3300053143 Bacteria 3339
246 Ga0500600_0074200 3300053149 Bacteria 1857
247 Ga0500633_0236385 3300053160 Bacteria 680
248 Ga0501084_0693058 3300054114 Bacteria 859
249 Ga0466962_0071114 3300061719 Bacteria 1662
250 2501944958 2501939600 Bacteria 6907073
251 2515495499 2515154088 Bacteria 5526283
252 2515720261 2515154129 Bacteria 5584369
253 2515755996 2515154137 Bacteria 5711575
254 2516084411 2515154202 Bacteria 5471270
255 2516089666 2515154203 Bacteria 5458536
256 2623497767 2622736605 Bacteria 4992138
257 2623585229 2622736626 Bacteria 7181580
258 2676484944 2675903059 Bacteria 8644972
259 2772645496 2772190715 Bacteria 6959372
260 2831937097 2831935698 Bacteria 5963223
261 2832010198 2832004796 Bacteria 6538017
262 2855675308 2855670206 Bacteria 7120389
263 2855679461 2855676851 Bacteria 7063653
264 2855687009 2855683550 Bacteria 7134265
265 2856859060 2856858025 Bacteria 7255264
266 2857289463 2857288857 Bacteria 7189066
267 2858852007 2858848962 Bacteria 6963058
268 2858874486 2858868258 Bacteria 7683772
269 2858887997 2858882152 Bacteria 7230291
270 2858895404 2858888857 Bacteria 7060307
271 2858900166 2858895516 Bacteria 7378898
272 2858902767 2858902515 Bacteria 7086037
273 2866069740 2866065130 Bacteria 6518152
274 2867306118 2867302475 Bacteria 7087181
275 2867317316 2867312974 Bacteria 7058875
276 2867323133 2867319477 Bacteria 7069771
277 2867510731 2867507094 Bacteria 6506033
278 2869054438 2869048445 Bacteria 6875584
279 2869065755 2869061728 Bacteria 7112407
280 2869073517 2869068681 Bacteria 7205615
281 2880495018 2880489317 Bacteria 7096270
282 2880497317 2880495981 Bacteria 7340502
283 2883826351 2883821847 Bacteria 5121194
284 2902584669 2902582711 Bacteria 6187705
285 2929225880 2929219909 Bacteria 6984360
286 2929231129 2929226422 Bacteria 7248583
287 2996222107 2996221748 Bacteria 6799777
288 649812981 649633069 Bacteria 6962533
289 8003834251 8003830390 Bacteria 6541657
290 8003858083 8003856774 Bacteria 7675274
291 8003870858 8003870546 Bacteria 7396674
292 8054704365 8054704163 Bacteria 7247792
293 8054731541 8054727385 Bacteria 7558670
294 8054740011 8054734606 Bacteria 6947278
295 8055416161 8055412473 Bacteria 6257500
296 JGI25406J46586_10013412
297 JGI25406J46586_10111990
298 rootL2_10227847
299 Ga0068869_101033444
300 Ga0070680_100001033
301 Ga0070680_100448400
302 Ga0070682_100378650
303 Ga0070682_100493075
304 Ga0068868_100249384
305 Ga0070661_100055767
306 Ga0070661_100338862
307 Ga0070661_100525401
308 Ga0070661_101078268
309 Ga0070668_100064654
310 Ga0070669_100494297
311 Ga0070659_100020409
312 Ga0070714_100135175
313 Ga0070713_100030945
314 Ga0070681_10001524
315 Ga0070681_10474595
316 Ga0070679_100008918
317 Ga0070679_100135401
318 Ga0070679_100164514
319 Ga0070679_100181562
320 Ga0070684_100059505
321 Ga0070684_100060634
322 Ga0070684_100231464
323 Ga0068855_100140816
324 Ga0068857_100073457
325 Ga0068856_100988882
326 Ga0068852_100618978
327 Ga0068852_102112592
328 Ga0068851_10363766
329 Ga0068863_100544889
330 Ga0068858_100110046
331 Ga0068858_101922376
332 Ga0068860_100127818
333 Ga0081539_10000015
334 Ga0081539_10000094
335 Ga0081539_10003266
336 Ga0081539_10004844
337 Ga0075364_10772638
338 Ga0075430_100162803
339 Ga0111539_10567348
340 Ga0105245_10042731
341 Ga0105245_10387797
342 Ga0105245_10736122
343 Ga0105247_10147310
344 Ga0105247_10455185
345 Ga0114129_10216519
346 Ga0105243_12393694
347 Ga0105237_10629490
348 Ga0105238_11184930
349 Ga0105239_10491931
350 Ga0157370_10266518
351 Ga0157369_10107440
352 Ga0157369_10798076
353 Ga0157378_10629736
354 Ga0157372_10228924
355 Ga0157372_10263628
356 Ga0157375_10448498
357 Ga0157377_10710181
358 Ga0157376_10927475
359 Ga0206351_10797260
360 Ga0206350_11637565
361 Ga0206353_10148830
362 Ga0206353_10392973
363 Ga0206353_11233292
364 Ga0207688_10322107
365 Ga0207705_10004026
366 Ga0207705_10029078
367 Ga0207707_10005298
368 Ga0207660_10003509
369 Ga0207660_10043995
370 Ga0207660_10305390
371 Ga0207660_10483248
372 Ga0207649_10050646
373 Ga0207649_10403374
374 Ga0207649_11342801
375 Ga0207652_10004033
376 Ga0207652_10103637
377 Ga0207652_10869691
378 Ga0207694_10659125
379 Ga0207687_10166425
380 Ga0207687_10193096
381 Ga0207687_10495442
382 Ga0207700_10062459
383 Ga0207664_10827724
384 Ga0207644_10418355
385 Ga0207665_10246213
386 Ga0207661_11118237
387 Ga0207679_10295054
388 Ga0207679_10400815
389 Ga0207668_10010343
390 Ga0207668_10027395
391 Ga0207658_10038433
392 Ga0207703_11774677
393 Ga0207678_10928548
394 Ga0207676_10499447
395 Ga0207676_10668513
396 Ga0207674_10111720
397 Ga0207674_10988965
398 Ga0207675_100402061
399 Ga0207698_10978567
400 Ga0207698_12181199
401 Ga0268266_10530203
402 Ga0268265_10121458
403 Ga0268264_10110501
404 Ga0307515_10035614
405 Ga0307515_10047545
406 Ga0307515_10117653
407 Ga0307512_10010211
408 Ga0307513_10006290
409 Ga0307513_10042977
410 Ga0307513_10122722
411 Ga0307513_10498059
412 Ga0307509_10034875
413 Ga0307408_100060450
414 Ga0307508_10007466
415 Ga0307508_10032765
416 Ga0307516_10000149
417 Ga0307516_10278231
418 Ga0307405_10061968
419 Ga0307410_10583841
420 Ga0307410_10593029
421 Ga0307407_10084501
422 Ga0307407_10324622
423 Ga0307412_10788189
424 Ga0307409_100353611
425 Ga0307409_100982648
426 Ga0307411_10118163
427 Ga0307411_10512032
428 Ga0307415_100009430
429 Ga0307507_10000009
430 Ga0307507_10140462
431 Ga0373948_0091238
432 Ga0373940_0000391
433 Ga0373951_0000148
434 Ga0373932_0012277
435 Ga0373942_0000067
436 Ga0373962_0000754
437 Ga0373935_0002586
438 Ga0395900_0008498
439 Ga0395900_0033582
440 Ga0395900_0175105
441 Ga0395898_0030317
442 Ga0395898_0033552
443 Ga0395898_0502551
444 Ga0395905_0107157
445 Ga0395901_0002722
446 Ga0395901_0002968
447 Ga0395901_0158126
448 Ga0451791_1260946
449 Ga0451791_1402988
450 Ga0451807_2183617
451 Ga0451833_0530581
452 Ga0451841_0533487
453 Ga0451841_0717964
454 Ga0451851_0466824
455 Ga0451843_0522220
456 Ga0451853_0834473
457 Ga0466965_0081826
458 Ga0466966_0027795
459 Ga0466961_0055164
460 Ga0466961_0095552
461 Ga0466961_0538261
462 Ga0466963_0240862
463 Ga0466964_0211190
464 Ga0466971_0028979
465 Ga0466971_0122979
466 Ga0466968_0393401
467 Ga0466970_0028812
468 Ga0466970_0402581
469 Ga0466957_0034649
470 Ga0466957_0081218
471 Ga0466957_0206841
472 Ga0466957_0748888
473 Ga0466960_0019008
474 Ga0466960_0155557
475 Ga0466960_0254381
476 Ga0466960_0268584
477 Ga0466959_0023080
478 Ga0466959_0120248
479 Ga0466959_0131833
480 Ga0466959_0230263
481 Ga0466958_0541397
482 Ga0466967_0019369
483 Ga0466967_0025215
484 Ga0466967_0100458
485 Ga0466967_0161994
486 Ga0466967_0657353
487 Ga0495651_0070260
488 Ga0495594_0017052
489 Ga0495628_0645957
490 Ga0495632_0066659
491 Ga0496108_0000019
492 Ga0496108_0006680
493 Ga0496109_0040558
494 Ga0496109_0685887
495 Ga0496110_0015826
496 Ga0496110_0295798
497 Ga0496112_0068061
498 Ga0496114_0209269
499 Ga0496114_0242614
500 Ga0501031_0006446
501 Ga0501031_0091268
502 Ga0501032_0000310
503 Ga0501032_0123770
504 Ga0501033_0000285
505 Ga0501033_0568013
506 Ga0501034_0351300
507 Ga0501036_0000324
508 Ga0501037_0001299
509 Ga0501038_0001284
510 Ga0501038_0086499
511 Ga0501039_0000313
512 Ga0501039_0070678
513 Ga0501040_0215831
514 Ga0501042_0035150
515 Ga0501043_0003146
516 Ga0501046_0000564
517 Ga0501046_0031317
518 Ga0501048_0000619
519 Ga0501069_0001362
520 Ga0501070_0134835
521 Ga0501073_0000623
522 Ga0501074_0000452
523 Ga0501076_0641763
524 Ga0501079_0551651
525 Ga0501080_0001037
526 Ga0501081_0590732
527 Ga0501083_0006529
528 Ga0501035_0104840
529 Ga0501044_0185201
530 Ga0501045_0411706
531 nmdc:mga05p37_446368_c1
532 nmdc:mga08y16_711196_c1
533 nmdc:mga0a205_467421_c1
534 Ga0500644_0020080
535 Ga0500644_0033156
536 Ga0500646_0049024
537 Ga0500562_073222
538 Ga0500569_036788
539 Ga0500594_0016692
540 Ga0500579_032542
541 Ga0500600_0074200
542 Ga0500633_0236385
543 Ga0501084_0693058
544 Ga0466962_0071114
545 2501944958
546 2515495499
547 2515720261
548 2515755996
549 2516084411
550 2516089666
551 2623497767
552 2623585229
553 2676484944
554 2772645496
555 2831937097
556 2832010198
557 2855675308
558 2855679461
559 2855687009
560 2856859060
561 2857289463
562 2858852007
563 2858874486
564 2858887997
565 2858895404
566 2858900166
567 2858902767
568 2866069740
569 2867306118
570 2867317316
571 2867323133
572 2867510731
573 2869054438
574 2869065755
575 2869073517
576 2880495018
577 2880497317
578 2883826351
579 2902584669
580 2929225880
581 2929231129
582 2996222107
583 649812981
584 8003834251
585 8003858083
586 8003870858
587 8054704365
588 8054731541
589 8054740011
590 8055416161

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10722

YbjN

Putative bacterial sensory transduction regulator

7

130

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k3s-assembly1.cif.gz_B type iii secretion chaperone sige 0.7754 42 123
2plg-assembly1.cif.gz_A crystal structure of t110839 protein from synechococcus elongatus 0.7625 1 128
1n5b-assembly3.cif.gz_B crystal structure of the yersinia enterocolitica molecular chaperone syce 0.7551 8 123
1n5b-assembly2.cif.gz_C crystal structure of the yersinia enterocolitica molecular chaperone syce 0.7523 8 123
1n5b-assembly1.cif.gz_A crystal structure of the yersinia enterocolitica molecular chaperone syce 0.7448 8 125
ID Description Score Start End Superfamily
af_P9WKU9_42_143_3.30.1460.10 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.9746 36 136 3.30.1460.10
af_P9WKU9_42_143_3.30.1460.10 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.956 36 136 3.30.1460.10
1k3sB00 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.7912 42 123 3.30.1460.10
2plgA01 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.7807 7 128 3.30.1460.10
af_P0AF76_2_132_3.30.1460.10 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.7773 4 131 3.30.1460.10
ID Description Score Start End GO Terms
AF-A0A6L6CA37-F1-model_v4 YbjN domain-containing protein 0.9929 31 160
AF-A0A7Z0DA41-F1-model_v4 Sensory transduction regulator 0.9913 2 164
AF-A0A6J6Q764-F1-model_v4 Unannotated protein 0.9909 7 160
AF-A0A0Q7JXV2-F1-model_v4 YbjN domain-containing protein 0.9907 4 162
AF-A0A2A9GT05-F1-model_v4 Putative sensory transduction regulator 0.99 2 161

Map