F392372

General Info

Members Datasets Scaffolds Average Seq Length
294 203 588 397

Family's Representative Sequence

Representative Sequence 3300061719|Ga0466962_0052836|Ga0466962_0052836_316_1713
Length 465
Sequence VSRRQLDRAGNARAREGLSEDDTGCTVLHVDMDAFYASVELIDRPHLRGRPVIVGGGGSRGVVLSATYEARAFGVHSAMPMSRARRLCPQGVVVEPDHHRYSEVSRGVMEIFRSVTPAVEPLSLDEAFLDVSGAVRRLGRPAVIAELIRDRVADEQRITCSVGVATTKFVAKLASGRAKPDGLLVVPGDETVPFLHALPVGALWGVGDRTEEVLSRLGLRTVSDIAHTPLDTLKRALGEAVGSHLHELSWGRDPRRVVPEQAEKSVGAEETFPRDVDDPELVLREVLRLSERVAARLRAQDVVGRTVVLKVRFADFTTITRSRTLPEHTDVARTIYGTARELFERLGLDRARLRLVGVRVEGLVPSSSGHRQLALDERPQGWREAERAVDRASARVGTGAVRPAALVTDGLDEPAPGPQLAPHTRPTRRSPRSPAAAARPPGGSIQMSSGDPDHTIGPDDFGSLT

Samples

Sample ID Description Type Environment
1 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
97 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
98 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
99 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
100 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
101 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
102 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
103 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
104 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
105 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
106 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
107 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
117 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
118 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
130 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
135 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
148 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
149 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
188 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
194 2671180195 Frankia sp. CcI49 Isolate Nodule
195 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
196 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
197 2773857922 Frankia sp. CcI49 Isolate Nodule
198 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
199 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
200 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
201 2920879853 Kocuria salina CV6 Isolate Unclassified
202 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
203 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.26
Metatranscriptomes 0
Isolates 3.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.02
Nodule 1.02
Rhizoplane 3.4
Rhizosphere 92.52
Stem 0
Stem Tuber 0
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466962_0052836 3300061719 Bacteria 1942
2 JGI24738J21930_10007666 3300002075 Bacteria 2479
3 JGI24751J29686_10000386 3300002459 Bacteria 14783
4 Ga0070658_10071460 3300005327 Bacteria 2843
5 Ga0070683_100086509 3300005329 Bacteria 2939
6 Ga0070683_100147529 3300005329 Bacteria 2230
7 Ga0070683_100307652 3300005329 Bacteria 1508
8 Ga0070670_100028763 3300005331 Bacteria 4784
9 Ga0070670_100076395 3300005331 Bacteria 2878
10 Ga0070680_100158432 3300005336 Bacteria 1902
11 Ga0068868_100106803 3300005338 Bacteria 2271
12 Ga0070660_100117069 3300005339 Bacteria 2125
13 Ga0070691_10094032 3300005341 Bacteria 1481
14 Ga0070692_10000835 3300005345 Bacteria 10326
15 Ga0070692_10045372 3300005345 Bacteria 2267
16 Ga0070675_100121380 3300005354 Bacteria 2220
17 Ga0070674_100076055 3300005356 Bacteria 2386
18 Ga0070673_100033653 3300005364 Bacteria 3872
19 Ga0070703_10011478 3300005406 Bacteria 2503
20 Ga0070701_10004805 3300005438 Bacteria 5524
21 Ga0070694_100086441 3300005444 Bacteria 2191
22 Ga0070708_100061862 3300005445 Bacteria 3346
23 Ga0070663_100043819 3300005455 Bacteria 3151
24 Ga0070681_10019803 3300005458 Bacteria 6739
25 Ga0068867_100003234 3300005459 Bacteria 11483
26 Ga0070707_100057402 3300005468 Bacteria 3734
27 Ga0070699_100048330 3300005518 Bacteria 3682
28 Ga0070679_100102523 3300005530 Bacteria 2848
29 Ga0070679_100126157 3300005530 Bacteria 2542
30 Ga0070684_100018194 3300005535 Bacteria 5784
31 Ga0070684_100035182 3300005535 Bacteria 4286
32 Ga0070684_100084939 3300005535 Bacteria 2807
33 Ga0068853_100038669 3300005539 Bacteria 4064
34 Ga0070672_100001420 3300005543 Bacteria 14804
35 Ga0070693_100068815 3300005547 Bacteria 2079
36 Ga0070704_100110075 3300005549 Bacteria 2094
37 Ga0070704_100130397 3300005549 Bacteria 1947
38 Ga0070664_100006170 3300005564 Bacteria 9686
39 Ga0068857_100101536 3300005577 Bacteria 2581
40 Ga0068857_100149023 3300005577 Bacteria 2119
41 Ga0068854_100075949 3300005578 Bacteria 2468
42 Ga0070702_100002498 3300005615 Bacteria 7964
43 Ga0068852_100005236 3300005616 Bacteria 9251
44 Ga0068866_10079015 3300005718 Bacteria 1761
45 Ga0068861_100002683 3300005719 Bacteria 11656
46 Ga0068861_100008183 3300005719 Bacteria 7195
47 Ga0068870_10000093 3300005840 Bacteria 29078
48 Ga0068863_100003876 3300005841 Bacteria 14791
49 Ga0081455_10011392 3300005937 Bacteria 8938
50 Ga0081455_10012510 3300005937 Bacteria 8466
51 Ga0081455_10020021 3300005937 Bacteria 6316
52 Ga0081540_1001414 3300005983 Bacteria 20771
53 Ga0075365_10028985 3300006038 Bacteria 3533
54 Ga0075428_100027703 3300006844 Bacteria 6268
55 Ga0075428_100060053 3300006844 Bacteria 4163
56 Ga0075428_100094685 3300006844 Bacteria 3256
57 Ga0075430_100091338 3300006846 Bacteria 2546
58 Ga0075431_100034042 3300006847 Bacteria 5250
59 Ga0075431_100096197 3300006847 Bacteria 3057
60 Ga0075433_10000593 3300006852 Bacteria 24053
61 Ga0075433_10144945 3300006852 Bacteria 2111
62 Ga0075434_100044390 3300006871 Bacteria 4409
63 Ga0075434_100111549 3300006871 Bacteria 2746
64 Ga0075429_100035728 3300006880 Bacteria 4322
65 Ga0105251_10010938 3300009011 Bacteria 5219
66 Ga0111539_10035139 3300009094 Bacteria 6069
67 Ga0111539_10120526 3300009094 Bacteria 3074
68 Ga0111539_10358314 3300009094 Bacteria 1698
69 Ga0114129_10020992 3300009147 Bacteria 9276
70 Ga0105243_10004224 3300009148 Bacteria 11384
71 Ga0105242_10030804 3300009176 Bacteria 4285
72 Ga0105249_10120388 3300009553 Bacteria 2494
73 Ga0105246_10031217 3300011119 Bacteria 3524
74 Ga0157369_10002627 3300013105 Bacteria 21471
75 Ga0157372_10006299 3300013307 Bacteria 12617
76 Ga0157372_10037143 3300013307 Bacteria 5370
77 Ga0157372_10323998 3300013307 Bacteria 1794
78 Ga0163163_10001575 3300014325 Bacteria 19234
79 Ga0157380_10003962 3300014326 Bacteria 10220
80 Ga0157377_10004619 3300014745 Bacteria 6367
81 Ga0207697_10053597 3300025315 Bacteria 1670
82 Ga0207688_10005330 3300025901 Bacteria 6982
83 Ga0207647_10016190 3300025904 Bacteria 5090
84 Ga0207643_10000677 3300025908 Bacteria 21229
85 Ga0207643_10000838 3300025908 Bacteria 18708
86 Ga0207705_10035410 3300025909 Bacteria 3571
87 Ga0207649_10022499 3300025920 Bacteria 3642
88 Ga0207646_10031896 3300025922 Bacteria 4770
89 Ga0207650_10010933 3300025925 Bacteria 6239
90 Ga0207650_10012238 3300025925 Bacteria 5921
91 Ga0207659_10163050 3300025926 Bacteria 1752
92 Ga0207659_10237075 3300025926 Bacteria 1474
93 Ga0207687_10028230 3300025927 Bacteria 3770
94 Ga0207709_10010731 3300025935 Bacteria 5046
95 Ga0207709_10036154 3300025935 Bacteria 2926
96 Ga0207691_10001678 3300025940 Bacteria 21870
97 Ga0207689_10130937 3300025942 Bacteria 2065
98 Ga0207661_10142094 3300025944 Bacteria 2067
99 Ga0207679_10081903 3300025945 Bacteria 2469
100 Ga0207678_10065582 3300026067 Bacteria 3118
101 Ga0207678_10139994 3300026067 Bacteria 2065
102 Ga0207708_10000642 3300026075 Bacteria 26799
103 Ga0207708_10035308 3300026075 Bacteria 3804
104 Ga0207708_10125869 3300026075 Bacteria 2000
105 Ga0207702_10077225 3300026078 Bacteria 2880
106 Ga0207641_10050324 3300026088 Bacteria 3524
107 Ga0207676_10001340 3300026095 Bacteria 18329
108 Ga0207674_10001990 3300026116 Bacteria 25893
109 Ga0207674_10277680 3300026116 Bacteria 1623
110 Ga0207675_100008221 3300026118 Bacteria 9833
111 Ga0207675_100230387 3300026118 Bacteria 1787
112 Ga0207683_10045468 3300026121 Bacteria 3840
113 Ga0207428_10001856 3300027907 Bacteria 21572
114 Ga0207428_10028237 3300027907 Bacteria 4663
115 Ga0268265_10045833 3300028380 Bacteria 3266
116 Ga0265334_10003086 3300028573 Bacteria 7610
117 Ga0265338_10074423 3300028800 Bacteria 2889
118 Ga0265340_10000297 3300031247 Bacteria 26067
119 Ga0307413_10009383 3300031824 Bacteria 4679
120 Ga0307410_10206512 3300031852 Bacteria 1503
121 Ga0307406_10182545 3300031901 Bacteria 1529
122 Ga0307406_10194588 3300031901 Bacteria 1487
123 Ga0307412_10191873 3300031911 Bacteria 1545
124 Ga0307409_100013912 3300031995 Bacteria 5205
125 Ga0307409_100027584 3300031995 Bacteria 4027
126 Ga0307416_100061855 3300032002 Bacteria 3058
127 Ga0307416_100071164 3300032002 Bacteria 2888
128 Ga0307416_100110646 3300032002 Bacteria 2419
129 Ga0307416_100291221 3300032002 Bacteria 1616
130 Ga0307414_10093327 3300032004 Bacteria 2243
131 Ga0307411_10128811 3300032005 Bacteria 1846
132 Ga0307415_100045859 3300032126 Bacteria 2934
133 Ga0307415_100248417 3300032126 Bacteria 1444
134 Ga0373934_0020652 3300035086 Bacteria 2532
135 Ga0373949_0005804 3300035090 Bacteria 2745
136 Ga0373939_0003188 3300035114 Bacteria 3848
137 Ga0373941_0018348 3300035115 Bacteria 1932
138 Ga0373954_0007513 3300035118 Bacteria 4769
139 Ga0373956_0015897 3300035119 Bacteria 3156
140 Ga0373957_0018083 3300035120 Bacteria 2463
141 Ga0373960_0007512 3300035121 Bacteria 2585
142 Ga0373955_0036186 3300035172 Bacteria 2618
143 Ga0373961_0003026 3300035241 Bacteria 4240
144 Ga0373931_0027199 3300035691 Bacteria 2918
145 Ga0373935_0021580 3300035692 Bacteria 3944
146 Ga0373937_0011432 3300036401 Bacteria 7790
147 Ga0395899_0018857 3300037312 Bacteria 5243
148 Ga0395899_0019276 3300037312 Bacteria 5183
149 Ga0395899_0100506 3300037312 Bacteria 2089
150 Ga0395899_0117743 3300037312 Unclassified 1905
151 Ga0395900_0001049 3300037418 Bacteria 35386
152 Ga0395900_0046220 3300037418 Bacteria 4483
153 Ga0395900_0132854 3300037418 Bacteria 2550
154 Ga0395900_0314865 3300037418 Bacteria 1547
155 Ga0395900_0336382 3300037418 Bacteria 1486
156 Ga0395898_0001480 3300037466 Bacteria 32760
157 Ga0395898_0015538 3300037466 Bacteria 7807
158 Ga0395898_0101331 3300037466 Bacteria 2765
159 Ga0395898_0210175 3300037466 Bacteria 1856
160 Ga0395905_0002836 3300037471 Bacteria 18983
161 Ga0395905_0005325 3300037471 Bacteria 13150
162 Ga0395905_0110342 3300037471 Bacteria 2583
163 Ga0395901_0000424 3300038443 Bacteria 49781
164 Ga0395901_0005538 3300038443 Bacteria 12787
165 Ga0395901_0005546 3300038443 Bacteria 12777
166 Ga0395901_0088822 3300038443 Bacteria 3233
167 Ga0395901_0110615 3300038443 Bacteria 2884
168 Ga0395901_0152041 3300038443 Unclassified 2432
169 Ga0395901_0368873 3300038443 Bacteria 1479
170 Ga0436363_0772240 3300039450 Bacteria 3668
171 Ga0439448_0022458 3300042005 Bacteria 1961
172 Ga0439464_0027762 3300042439 Bacteria 1575
173 Ga0439440_0004132 3300042993 Bacteria 2841
174 Ga0466966_0092597 3300044684 Bacteria 1875
175 Ga0466966_0101852 3300044684 Bacteria 1776
176 Ga0466961_0009823 3300044693 Bacteria 6092
177 Ga0466963_0025783 3300044694 Bacteria 3753
178 Ga0466963_0108788 3300044694 Bacteria 1901
179 Ga0466971_0026414 3300044719 Bacteria 2595
180 Ga0466957_0102892 3300044842 Bacteria 1802
181 Ga0466957_0178087 3300044842 Bacteria 1387
182 Ga0466960_0007390 3300044901 Bacteria 4462
183 Ga0466960_0051890 3300044901 Bacteria 1983
184 Ga0466960_0082713 3300044901 Bacteria 1621
185 Ga0466959_0027280 3300045049 Bacteria 4236
186 Ga0466959_0069523 3300045049 Bacteria 2551
187 Ga0466959_0166945 3300045049 Bacteria 1545
188 Ga0451576_0330625 3300045051 Bacteria 1595
189 Ga0466958_0018328 3300045836 Bacteria 4062
190 Ga0466967_0069902 3300045976 Bacteria 3140
191 Ga0466967_0078868 3300045976 Bacteria 2967
192 Ga0495617_017719 3300046452 Bacteria 2407
193 Ga0495653_0050702 3300046463 Bacteria 3191
194 Ga0495664_0046380 3300046477 Bacteria 2578
195 Ga0495584_0023994 3300046491 Bacteria 3091
196 Ga0495608_0010284 3300046511 Bacteria 6528
197 Ga0495608_0030437 3300046511 Bacteria 3654
198 Ga0495640_0175916 3300046533 Bacteria 1366
199 Ga0495587_0025789 3300046536 Bacteria 3590
200 Ga0495645_0103342 3300046543 Bacteria 2024
201 Ga0495633_0024310 3300046558 Bacteria 2995
202 Ga0495635_0051053 3300046663 Bacteria 2850
203 Ga0495657_0060878 3300046675 Bacteria 2499
204 Ga0495646_0034051 3300046680 Bacteria 3165
205 Ga0495669_0046121 3300046684 Bacteria 1945
206 Ga0495613_0095997 3300046689 Bacteria 2144
207 Ga0495670_0019909 3300046691 Bacteria 3306
208 Ga0495604_0049693 3300047317 Bacteria 3257
209 Ga0495676_0090205 3300047321 Bacteria 2295
210 Ga0495676_0142892 3300047321 Bacteria 1713
211 Ga0495680_0049230 3300047322 Bacteria 3301
212 Ga0495679_031283 3300047446 Bacteria 1718
213 Ga0495684_0103383 3300047471 Bacteria 2153
214 Ga0495602_0056582 3300048088 Bacteria 3447
215 Ga0496102_0035780 3300048905 Bacteria 4471
216 Ga0496106_0240129 3300048909 Bacteria 1448
217 Ga0496108_0340809 3300048911 Bacteria 1308
218 Ga0496109_0101351 3300048912 Bacteria 2672
219 Ga0496110_0143009 3300048913 Bacteria 2163
220 Ga0496111_0200121 3300048914 Bacteria 1485
221 Ga0496112_0001601 3300048915 Bacteria 17507
222 Ga0496112_0263194 3300048915 Bacteria 1674
223 Ga0496112_0302968 3300048915 Bacteria 1543
224 Ga0496112_0418878 3300048915 Bacteria 1278
225 Ga0501031_0001711 3300049568 Bacteria 13778
226 Ga0501031_0086757 3300049568 Bacteria 2041
227 Ga0501031_0186465 3300049568 Bacteria 1355
228 Ga0501032_0009643 3300049569 Bacteria 6994
229 Ga0501033_0001660 3300049570 Bacteria 19474
230 Ga0501034_0004653 3300049571 Bacteria 15198
231 Ga0501034_0011583 3300049571 Bacteria 9132
232 Ga0501037_0001550 3300049573 Bacteria 16766
233 Ga0501038_0001501 3300049574 Bacteria 21457
234 Ga0501038_0018821 3300049574 Bacteria 6233
235 Ga0501038_0048888 3300049574 Bacteria 3659
236 Ga0501039_0046561 3300049575 Bacteria 3350
237 Ga0501039_0097901 3300049575 Bacteria 2288
238 Ga0501039_0128199 3300049575 Bacteria 1991
239 Ga0501040_0077812 3300049576 Bacteria 2294
240 Ga0501041_0053624 3300049577 Bacteria 2459
241 Ga0501041_0105083 3300049577 Bacteria 1750
242 Ga0501041_0153747 3300049577 Bacteria 1437
243 Ga0501043_0000648 3300049579 Bacteria 30700
244 Ga0501043_0013293 3300049579 Bacteria 6438
245 Ga0501043_0192973 3300049579 Bacteria 1583
246 Ga0501046_0000122 3300049580 Bacteria 82617
247 Ga0501047_0108557 3300049581 Bacteria 2657
248 Ga0501047_0180403 3300049581 Bacteria 1978
249 Ga0501048_0013892 3300049582 Bacteria 5971
250 Ga0501048_0030057 3300049582 Bacteria 3935
251 Ga0501048_0056849 3300049582 Bacteria 2775
252 Ga0501067_0029639 3300049583 Bacteria 3033
253 Ga0501069_0005583 3300049585 Bacteria 6545
254 Ga0501072_0074542 3300049588 Bacteria 2684
255 Ga0501073_0008235 3300049589 Bacteria 7731
256 Ga0501074_0000484 3300049590 Bacteria 24222
257 Ga0501074_0187300 3300049590 Bacteria 1476
258 Ga0501075_0195581 3300049591 Bacteria 1542
259 Ga0501076_0031406 3300049592 Bacteria 4141
260 Ga0501077_0034273 3300049593 Bacteria 3230
261 Ga0501080_0110511 3300049742 Bacteria 2547
262 Ga0501081_0021610 3300049743 Bacteria 4294
263 Ga0501045_0017911 3300049824 Bacteria 5029
264 Ga0501045_0042704 3300049824 Bacteria 3301
265 nmdc:mga06z11_11326_c1 3300050494 Bacteria 3842
266 nmdc:mga05p37_239973_c1 3300050507 Bacteria 2180
267 nmdc:mga05p37_50131_c1 3300050507 Bacteria 5134
268 nmdc:mga05p37_72010_c1 3300050507 Bacteria 4253
269 nmdc:mga06r32_291151_c1 3300050510 Bacteria 1620
270 nmdc:mga08y16_191631_c1 3300050511 Bacteria 2121
271 nmdc:mga08y16_87944_c1 3300050511 Bacteria 3238
272 nmdc:mga0n895_23222_c1 3300050512 Bacteria 5826
273 nmdc:mga0n895_47720_c1 3300050512 Bacteria 4188
274 nmdc:mga0a205_16983_c1 3300050515 Bacteria 6813
275 nmdc:mga0a205_95934_c1 3300050515 Bacteria 2865
276 Ga0495595_0025571 3300053084 Bacteria 2618
277 Ga0495619_0045165 3300053085 Bacteria 2894
278 Ga0495619_0143360 3300053085 Bacteria 1646
279 Ga0500616_0000832 3300053153 Bacteria 34657
280 Ga0501084_0056704 3300054114 Bacteria 3277
281 Ga0590075_003124 3300059424 Bacteria 3936
282 Ga0501082_0045618 3300060353 Bacteria 3779
283 Ga0501082_0495447 3300060353 Bacteria 1068
284 2623498592 2622736605 Bacteria 4992138
285 2671832930 2671180195 Bacteria 9757215
286 2686537264 2684623035 Bacteria 8032739
287 2689991090 2687453743 Bacteria 8361025
288 2774851086 2773857922 Bacteria 9757215
289 2895887266 2895880812 Bacteria 11255272
290 2917743795 2917736166 Bacteria 9690793
291 2919393364 2919391150 Bacteria 4884741
292 2920882401 2920879853 Bacteria 4216831
293 8053947339 8053945823 Bacteria 8962862
294 8056066422 8056060235 Bacteria 7259403
295 Ga0466962_0052836
296 JGI24738J21930_10007666
297 JGI24751J29686_10000386
298 Ga0070658_10071460
299 Ga0070683_100086509
300 Ga0070683_100147529
301 Ga0070683_100307652
302 Ga0070670_100028763
303 Ga0070670_100076395
304 Ga0070680_100158432
305 Ga0068868_100106803
306 Ga0070660_100117069
307 Ga0070691_10094032
308 Ga0070692_10000835
309 Ga0070692_10045372
310 Ga0070675_100121380
311 Ga0070674_100076055
312 Ga0070673_100033653
313 Ga0070703_10011478
314 Ga0070701_10004805
315 Ga0070694_100086441
316 Ga0070708_100061862
317 Ga0070663_100043819
318 Ga0070681_10019803
319 Ga0068867_100003234
320 Ga0070707_100057402
321 Ga0070699_100048330
322 Ga0070679_100102523
323 Ga0070679_100126157
324 Ga0070684_100018194
325 Ga0070684_100035182
326 Ga0070684_100084939
327 Ga0068853_100038669
328 Ga0070672_100001420
329 Ga0070693_100068815
330 Ga0070704_100110075
331 Ga0070704_100130397
332 Ga0070664_100006170
333 Ga0068857_100101536
334 Ga0068857_100149023
335 Ga0068854_100075949
336 Ga0070702_100002498
337 Ga0068852_100005236
338 Ga0068866_10079015
339 Ga0068861_100002683
340 Ga0068861_100008183
341 Ga0068870_10000093
342 Ga0068863_100003876
343 Ga0081455_10011392
344 Ga0081455_10012510
345 Ga0081455_10020021
346 Ga0081540_1001414
347 Ga0075365_10028985
348 Ga0075428_100027703
349 Ga0075428_100060053
350 Ga0075428_100094685
351 Ga0075430_100091338
352 Ga0075431_100034042
353 Ga0075431_100096197
354 Ga0075433_10000593
355 Ga0075433_10144945
356 Ga0075434_100044390
357 Ga0075434_100111549
358 Ga0075429_100035728
359 Ga0105251_10010938
360 Ga0111539_10035139
361 Ga0111539_10120526
362 Ga0111539_10358314
363 Ga0114129_10020992
364 Ga0105243_10004224
365 Ga0105242_10030804
366 Ga0105249_10120388
367 Ga0105246_10031217
368 Ga0157369_10002627
369 Ga0157372_10006299
370 Ga0157372_10037143
371 Ga0157372_10323998
372 Ga0163163_10001575
373 Ga0157380_10003962
374 Ga0157377_10004619
375 Ga0207697_10053597
376 Ga0207688_10005330
377 Ga0207647_10016190
378 Ga0207643_10000677
379 Ga0207643_10000838
380 Ga0207705_10035410
381 Ga0207649_10022499
382 Ga0207646_10031896
383 Ga0207650_10010933
384 Ga0207650_10012238
385 Ga0207659_10163050
386 Ga0207659_10237075
387 Ga0207687_10028230
388 Ga0207709_10010731
389 Ga0207709_10036154
390 Ga0207691_10001678
391 Ga0207689_10130937
392 Ga0207661_10142094
393 Ga0207679_10081903
394 Ga0207678_10065582
395 Ga0207678_10139994
396 Ga0207708_10000642
397 Ga0207708_10035308
398 Ga0207708_10125869
399 Ga0207702_10077225
400 Ga0207641_10050324
401 Ga0207676_10001340
402 Ga0207674_10001990
403 Ga0207674_10277680
404 Ga0207675_100008221
405 Ga0207675_100230387
406 Ga0207683_10045468
407 Ga0207428_10001856
408 Ga0207428_10028237
409 Ga0268265_10045833
410 Ga0265334_10003086
411 Ga0265338_10074423
412 Ga0265340_10000297
413 Ga0307413_10009383
414 Ga0307410_10206512
415 Ga0307406_10182545
416 Ga0307406_10194588
417 Ga0307412_10191873
418 Ga0307409_100013912
419 Ga0307409_100027584
420 Ga0307416_100061855
421 Ga0307416_100071164
422 Ga0307416_100110646
423 Ga0307416_100291221
424 Ga0307414_10093327
425 Ga0307411_10128811
426 Ga0307415_100045859
427 Ga0307415_100248417
428 Ga0373934_0020652
429 Ga0373949_0005804
430 Ga0373939_0003188
431 Ga0373941_0018348
432 Ga0373954_0007513
433 Ga0373956_0015897
434 Ga0373957_0018083
435 Ga0373960_0007512
436 Ga0373955_0036186
437 Ga0373961_0003026
438 Ga0373931_0027199
439 Ga0373935_0021580
440 Ga0373937_0011432
441 Ga0395899_0018857
442 Ga0395899_0019276
443 Ga0395899_0100506
444 Ga0395899_0117743
445 Ga0395900_0001049
446 Ga0395900_0046220
447 Ga0395900_0132854
448 Ga0395900_0314865
449 Ga0395900_0336382
450 Ga0395898_0001480
451 Ga0395898_0015538
452 Ga0395898_0101331
453 Ga0395898_0210175
454 Ga0395905_0002836
455 Ga0395905_0005325
456 Ga0395905_0110342
457 Ga0395901_0000424
458 Ga0395901_0005538
459 Ga0395901_0005546
460 Ga0395901_0088822
461 Ga0395901_0110615
462 Ga0395901_0152041
463 Ga0395901_0368873
464 Ga0436363_0772240
465 Ga0439448_0022458
466 Ga0439464_0027762
467 Ga0439440_0004132
468 Ga0466966_0092597
469 Ga0466966_0101852
470 Ga0466961_0009823
471 Ga0466963_0025783
472 Ga0466963_0108788
473 Ga0466971_0026414
474 Ga0466957_0102892
475 Ga0466957_0178087
476 Ga0466960_0007390
477 Ga0466960_0051890
478 Ga0466960_0082713
479 Ga0466959_0027280
480 Ga0466959_0069523
481 Ga0466959_0166945
482 Ga0451576_0330625
483 Ga0466958_0018328
484 Ga0466967_0069902
485 Ga0466967_0078868
486 Ga0495617_017719
487 Ga0495653_0050702
488 Ga0495664_0046380
489 Ga0495584_0023994
490 Ga0495608_0010284
491 Ga0495608_0030437
492 Ga0495640_0175916
493 Ga0495587_0025789
494 Ga0495645_0103342
495 Ga0495633_0024310
496 Ga0495635_0051053
497 Ga0495657_0060878
498 Ga0495646_0034051
499 Ga0495669_0046121
500 Ga0495613_0095997
501 Ga0495670_0019909
502 Ga0495604_0049693
503 Ga0495676_0090205
504 Ga0495676_0142892
505 Ga0495680_0049230
506 Ga0495679_031283
507 Ga0495684_0103383
508 Ga0495602_0056582
509 Ga0496102_0035780
510 Ga0496106_0240129
511 Ga0496108_0340809
512 Ga0496109_0101351
513 Ga0496110_0143009
514 Ga0496111_0200121
515 Ga0496112_0001601
516 Ga0496112_0263194
517 Ga0496112_0302968
518 Ga0496112_0418878
519 Ga0501031_0001711
520 Ga0501031_0086757
521 Ga0501031_0186465
522 Ga0501032_0009643
523 Ga0501033_0001660
524 Ga0501034_0004653
525 Ga0501034_0011583
526 Ga0501037_0001550
527 Ga0501038_0001501
528 Ga0501038_0018821
529 Ga0501038_0048888
530 Ga0501039_0046561
531 Ga0501039_0097901
532 Ga0501039_0128199
533 Ga0501040_0077812
534 Ga0501041_0053624
535 Ga0501041_0105083
536 Ga0501041_0153747
537 Ga0501043_0000648
538 Ga0501043_0013293
539 Ga0501043_0192973
540 Ga0501046_0000122
541 Ga0501047_0108557
542 Ga0501047_0180403
543 Ga0501048_0013892
544 Ga0501048_0030057
545 Ga0501048_0056849
546 Ga0501067_0029639
547 Ga0501069_0005583
548 Ga0501072_0074542
549 Ga0501073_0008235
550 Ga0501074_0000484
551 Ga0501074_0187300
552 Ga0501075_0195581
553 Ga0501076_0031406
554 Ga0501077_0034273
555 Ga0501080_0110511
556 Ga0501081_0021610
557 Ga0501045_0017911
558 Ga0501045_0042704
559 nmdc:mga06z11_11326_c1
560 nmdc:mga05p37_239973_c1
561 nmdc:mga05p37_50131_c1
562 nmdc:mga05p37_72010_c1
563 nmdc:mga06r32_291151_c1
564 nmdc:mga08y16_191631_c1
565 nmdc:mga08y16_87944_c1
566 nmdc:mga0n895_23222_c1
567 nmdc:mga0n895_47720_c1
568 nmdc:mga0a205_16983_c1
569 nmdc:mga0a205_95934_c1
570 Ga0495595_0025571
571 Ga0495619_0045165
572 Ga0495619_0143360
573 Ga0500616_0000832
574 Ga0501084_0056704
575 Ga0590075_003124
576 Ga0501082_0045618
577 Ga0501082_0495447
578 2623498592
579 2671832930
580 2686537264
581 2689991090
582 2774851086
583 2895887266
584 2917743795
585 2919393364
586 2920882401
587 8053947339
588 8056066422

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

30

176

0.99

PF21999

IMS_HHH_1

DNA polymerase-iota, thumb domain

201

253

0.96

PF11799

IMS_C

impB/mucB/samB family C-terminal domain

263

375

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dez-assembly1.cif.gz_A structure of msdpo4 0.9365 9 241
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.9291 6 204
4dez-assembly1.cif.gz_A structure of msdpo4 0.9256 9 241
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.8996 6 204
7aoi-assembly1.cif.gz_BS trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate 0.8651 182 232
ID Description Score Start End Superfamily
af_Q2FWZ5_4_63_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9701 20 75 3.40.1170.60
4ir1A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.965 28 77 3.40.1170.60
af_P34409_148_297_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9601 80 169 3.30.70.270
af_Q2FWZ5_64_170_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9598 77 177 3.30.70.270
af_D3ZRU9_536_629_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9542 80 167 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A6B2XPQ8-F1-model_v4 DNA polymerase IV 0.9869 34 177 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A520W1V6-F1-model_v4 DNA polymerase IV 0.9775 2 162 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A2W6EWT8-F1-model_v4 DNA polymerase IV 0.9745 1 241 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-X1UH89-F1-model_v4 UmuC domain-containing protein 0.9722 92 208 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7Y1U053-F1-model_v4 DNA polymerase IV (EC 2.7.7.7) 0.9702 10 157 GO:0003887
GO:0005829
GO:0009432
GO:0042276

Map