F392104

General Info

Members Datasets Scaffolds Average Seq Length
294 221 588 344

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10016567|Ga0213875_100165672
Length 342
Sequence MTETKPILEVLSGTRQTIPPVWFMRQAGRYLPEYRALREHAGSFLKLCFTPDFAAEVTLQPIRRFGFDAAILFSDILVVPHALGRSVSFEAGEGPRLEPLNAASVKALRTEADRDALAPVYEAVRLIKRDLPAHVALIGFCGAPWTVATYMIAGRGTPDQAPARMFAYREPEAFARVIDILVDVSSLYLVEQIRAGAEAVQIFDTWAGVLPPREFQRWCVEPVARIVENVRRDIPGAKIIGFPRGAGALLTKYLDRVQVNAVGLDWAAEPEFVREHVQSRVAVQGNLDPLVLLAGGDALDRAIDDVLANFADRPFIFNLGHGILPETPIAHVERTLQRLRRS

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300012507 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
79 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
80 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
81 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
82 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
83 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
84 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
87 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
89 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
90 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
91 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
92 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
93 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
94 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
97 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
98 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
122 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
125 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
126 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
131 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
136 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
151 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
154 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
155 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
156 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
157 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
162 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
163 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
164 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
174 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
177 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
178 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
193 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
194 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
195 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
196 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
197 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
198 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
200 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
201 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
202 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
203 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
204 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
205 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
206 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
207 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
208 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
209 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
210 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
211 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
212 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
213 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
214 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
215 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
216 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
217 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
218 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
219 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
220 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
221 2909042592 Labrys sp. LIt4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.44
Nodule 0.34
Rhizoplane 8.5
Rhizosphere 83.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10016567 3300021388 Bacteria 3572
2 JGI25404J52841_10004602 3300003659 Bacteria 2808
3 Ga0070658_10071726 3300005327 Bacteria 2837
4 Ga0070666_10001254 3300005335 Bacteria 15354
5 Ga0070682_100052453 3300005337 Bacteria 2552
6 Ga0068868_100006007 3300005338 Bacteria 8575
7 Ga0070660_100109104 3300005339 Bacteria 2200
8 Ga0070689_100017774 3300005340 Bacteria 5229
9 Ga0070668_100059211 3300005347 Bacteria 2964
10 Ga0070669_100144663 3300005353 Bacteria 1836
11 Ga0070674_100067688 3300005356 Bacteria 2512
12 Ga0070673_100075570 3300005364 Bacteria 2718
13 Ga0070667_100011934 3300005367 Bacteria 7189
14 Ga0070714_100014018 3300005435 Bacteria 6431
15 Ga0070714_100045793 3300005435 Bacteria 3708
16 Ga0070713_100000749 3300005436 Bacteria 20796
17 Ga0070713_100059036 3300005436 Bacteria 3202
18 Ga0070713_100351860 3300005436 Bacteria 1367
19 Ga0070710_10007104 3300005437 Bacteria 5410
20 Ga0070711_100064360 3300005439 Bacteria 2562
21 Ga0070698_100189264 3300005471 Bacteria 1996
22 Ga0070679_100081740 3300005530 Bacteria 3220
23 Ga0070684_100012169 3300005535 Bacteria 6882
24 Ga0070686_100004861 3300005544 Bacteria 7417
25 Ga0070664_100072515 3300005564 Bacteria 2953
26 Ga0070702_100051968 3300005615 Bacteria 2348
27 Ga0068852_100032124 3300005616 Bacteria 4342
28 Ga0068864_100258103 3300005618 Bacteria 1620
29 Ga0068863_100154177 3300005841 Bacteria 2199
30 Ga0068862_100154034 3300005844 Bacteria 2047
31 Ga0081455_10000002 3300005937 Bacteria 460472
32 Ga0081455_10015549 3300005937 Bacteria 7388
33 Ga0081538_10060559 3300005981 Bacteria 2176
34 Ga0081540_1000166 3300005983 Bacteria 68242
35 Ga0070717_10039944 3300006028 Bacteria 3819
36 Ga0070717_10070756 3300006028 Bacteria 2908
37 Ga0075363_100066001 3300006048 Bacteria 1958
38 Ga0075364_10036006 3300006051 Bacteria 3199
39 Ga0070716_100001657 3300006173 Bacteria 10041
40 Ga0070716_100086986 3300006173 Bacteria 1881
41 Ga0070712_100087179 3300006175 Bacteria 2277
42 Ga0075369_10016315 3300006186 Bacteria 2995
43 Ga0097621_100014206 3300006237 Bacteria 5954
44 Ga0068871_100005369 3300006358 Bacteria 8981
45 Ga0075428_100161416 3300006844 Bacteria 2433
46 Ga0068865_100066721 3300006881 Bacteria 2539
47 Ga0099795_10001109 3300007788 Bacteria 5597
48 Ga0111539_10104375 3300009094 Bacteria 3325
49 Ga0111539_10287874 3300009094 Bacteria 1912
50 Ga0105247_10009488 3300009101 Bacteria 5903
51 Ga0105243_10006975 3300009148 Bacteria 8699
52 Ga0105242_10169541 3300009176 Bacteria 1917
53 Ga0105238_10034755 3300009551 Bacteria 5127
54 Ga0157342_1001717 3300012507 Bacteria 1680
55 Ga0157374_10064601 3300013296 Bacteria 3435
56 Ga0157372_10114766 3300013307 Bacteria 3088
57 Ga0157380_10135246 3300014326 Bacteria 2109
58 Ga0163161_10126098 3300017792 Bacteria 1928
59 Ga0209025_1045187 3300025294 Bacteria 1830
60 Ga0207685_10035260 3300025905 Bacteria 1825
61 Ga0207699_10002977 3300025906 Bacteria 8054
62 Ga0207699_10030204 3300025906 Bacteria 3030
63 Ga0207645_10011508 3300025907 Bacteria 6037
64 Ga0207705_10018481 3300025909 Bacteria 4986
65 Ga0207693_10002937 3300025915 Bacteria 14752
66 Ga0207693_10024790 3300025915 Bacteria 4757
67 Ga0207662_10099913 3300025918 Bacteria 1797
68 Ga0207657_10014898 3300025919 Bacteria 7564
69 Ga0207657_10057036 3300025919 Bacteria 3368
70 Ga0207681_10067587 3300025923 Bacteria 2479
71 Ga0207687_10170566 3300025927 Bacteria 1678
72 Ga0207664_10018053 3300025929 Bacteria 5184
73 Ga0207664_10081559 3300025929 Bacteria 2632
74 Ga0207664_10165393 3300025929 Bacteria 1889
75 Ga0207690_10213945 3300025932 Bacteria 1471
76 Ga0207709_10180332 3300025935 Bacteria 1491
77 Ga0207665_10004655 3300025939 Bacteria 9113
78 Ga0207665_10006373 3300025939 Bacteria 7828
79 Ga0207691_10070228 3300025940 Bacteria 3163
80 Ga0207711_10011159 3300025941 Bacteria 7467
81 Ga0207667_10022622 3300025949 Bacteria 6937
82 Ga0207639_10104717 3300026041 Bacteria 2294
83 Ga0207678_10008100 3300026067 Bacteria 9268
84 Ga0207708_10042338 3300026075 Bacteria 3471
85 Ga0207641_10099099 3300026088 Bacteria 2563
86 Ga0207683_10001459 3300026121 Bacteria 21325
87 Ga0268265_10195284 3300028380 Bacteria 1751
88 Ga0265340_10015122 3300031247 Bacteria 4015
89 Ga0265313_10020196 3300031595 Bacteria 3681
90 Ga0265342_10000625 3300031712 Bacteria 37152
91 Ga0373958_0003303 3300034819 Bacteria 2320
92 Ga0373959_0005202 3300034820 Bacteria 2131
93 Ga0373926_0007441 3300035083 Bacteria 3646
94 Ga0373928_0008731 3300035084 Bacteria 1972
95 Ga0373934_0030962 3300035086 Bacteria 2094
96 Ga0373944_0043279 3300035089 Bacteria 1399
97 Ga0373951_0004364 3300035091 Bacteria 3363
98 Ga0373923_0009138 3300035111 Bacteria 3565
99 Ga0373923_0034826 3300035111 Bacteria 2046
100 Ga0373932_0007946 3300035112 Bacteria 2533
101 Ga0373936_0082926 3300035113 Bacteria 1337
102 Ga0373939_0042672 3300035114 Bacteria 1372
103 Ga0373941_0000168 3300035115 Bacteria 12071
104 Ga0373953_0023158 3300035117 Bacteria 2349
105 Ga0373953_0051358 3300035117 Bacteria 1667
106 Ga0373954_0042624 3300035118 Bacteria 2116
107 Ga0373954_0077133 3300035118 Bacteria 1589
108 Ga0373956_0082414 3300035119 Bacteria 1477
109 Ga0373943_0002492 3300035170 Bacteria 8370
110 Ga0373946_0002144 3300035171 Bacteria 6923
111 Ga0373946_0013913 3300035171 Bacteria 3030
112 Ga0373955_0002083 3300035172 Bacteria 8628
113 Ga0373942_0002561 3300035207 Bacteria 4392
114 Ga0373962_0005800 3300035242 Bacteria 2981
115 Ga0373924_0003012 3300035410 Bacteria 5734
116 Ga0373931_0007821 3300035691 Bacteria 5052
117 Ga0373935_0024165 3300035692 Bacteria 3738
118 Ga0373935_0114099 3300035692 Bacteria 1797
119 Ga0373935_0115618 3300035692 Bacteria 1786
120 Ga0373927_0016979 3300035695 Bacteria 4797
121 Ga0373927_0030598 3300035695 Bacteria 3511
122 Ga0373933_0001101 3300035724 Bacteria 16117
123 Ga0373947_0087848 3300035725 Bacteria 1934
124 Ga0373937_0001232 3300036401 Bacteria 21520
125 Ga0373937_0036123 3300036401 Bacteria 4501
126 Ga0373937_0317923 3300036401 Bacteria 1473
127 Ga0395899_0066702 3300037312 Bacteria 2642
128 Ga0395900_0034932 3300037418 Bacteria 5178
129 Ga0395898_0071806 3300037466 Bacteria 3344
130 Ga0436364_0532105 3300037853 Bacteria 12945
131 Ga0395901_0269369 3300038443 Bacteria 1772
132 Ga0436365_1844796 3300039437 Bacteria 4254
133 Ga0436361_0153303 3300039447 Bacteria 15780
134 Ga0466963_0049692 3300044694 Bacteria 2774
135 Ga0466971_0070252 3300044719 Bacteria 1590
136 Ga0466967_0003202 3300045976 Bacteria 10566
137 Ga0495592_0000694 3300046454 Bacteria 23469
138 Ga0495592_0120476 3300046454 Bacteria 1846
139 Ga0495603_0020227 3300046455 Bacteria 4034
140 Ga0495629_0000588 3300046459 Bacteria 29503
141 Ga0495629_0117215 3300046459 Bacteria 1855
142 Ga0495638_0095358 3300046460 Bacteria 1787
143 Ga0495651_0000136 3300046462 Bacteria 54665
144 Ga0495653_0003663 3300046463 Bacteria 12410
145 Ga0495582_0006066 3300046473 Bacteria 6732
146 Ga0495639_0007375 3300046475 Bacteria 4720
147 Ga0495664_0031785 3300046477 Bacteria 3095
148 Ga0495584_0088395 3300046491 Bacteria 1562
149 Ga0495585_0008207 3300046492 Bacteria 6341
150 Ga0495594_0003274 3300046499 Bacteria 8388
151 Ga0495607_0010697 3300046501 Bacteria 6149
152 Ga0495618_0003620 3300046514 Bacteria 9573
153 Ga0495630_0021849 3300046517 Bacteria 4725
154 Ga0495643_0028413 3300046522 Bacteria 3136
155 Ga0495644_0001475 3300046523 Bacteria 9593
156 Ga0495666_0082442 3300046526 Bacteria 1520
157 Ga0495652_0003608 3300046529 Bacteria 15173
158 Ga0495665_0059495 3300046531 Bacteria 2016
159 Ga0495640_0002500 3300046533 Bacteria 14791
160 Ga0495587_0000753 3300046536 Bacteria 21591
161 Ga0495645_0013485 3300046543 Bacteria 5780
162 Ga0495622_0079762 3300046557 Bacteria 1506
163 Ga0495633_0006799 3300046558 Bacteria 6706
164 Ga0495667_0000450 3300046559 Bacteria 26281
165 Ga0495656_0000123 3300046615 Bacteria 29630
166 Ga0495634_0033166 3300046642 Bacteria 3549
167 Ga0495635_0029943 3300046663 Bacteria 3784
168 Ga0495659_0000648 3300046664 Bacteria 12635
169 Ga0495661_0018960 3300046665 Bacteria 4514
170 Ga0495588_0008121 3300046674 Bacteria 4800
171 Ga0495657_0017913 3300046675 Bacteria 5137
172 Ga0495599_0007497 3300046678 Bacteria 6615
173 Ga0495623_0003898 3300046679 Bacteria 9838
174 Ga0495646_0006980 3300046680 Bacteria 7170
175 Ga0495647_0002969 3300046681 Bacteria 5388
176 Ga0495647_0030037 3300046681 Bacteria 2014
177 Ga0495658_0000601 3300046683 Bacteria 19735
178 Ga0495658_0075191 3300046683 Bacteria 1970
179 Ga0495613_0027326 3300046689 Bacteria 4246
180 Ga0495613_0228565 3300046689 Bacteria 1304
181 Ga0495624_0126497 3300046690 Bacteria 1568
182 Ga0495670_0012780 3300046691 Bacteria 4128
183 Ga0495581_0003184 3300047315 Bacteria 9395
184 Ga0495604_0001199 3300047317 Bacteria 21407
185 Ga0495674_0000573 3300047319 Bacteria 34362
186 Ga0495680_0000285 3300047322 Bacteria 56843
187 Ga0495680_0019326 3300047322 Bacteria 5753
188 Ga0495675_0005102 3300047444 Bacteria 7991
189 Ga0495684_0032498 3300047471 Bacteria 4007
190 Ga0495593_0008712 3300047673 Bacteria 5892
191 Ga0495602_0017578 3300048088 Bacteria 7164
192 Ga0496100_0008582 3300048903 Bacteria 5704
193 Ga0496101_0022170 3300048904 Bacteria 4369
194 Ga0496102_0168692 3300048905 Bacteria 2060
195 Ga0496103_0061793 3300048906 Bacteria 2330
196 Ga0496104_0012293 3300048907 Bacteria 7695
197 Ga0496104_0037030 3300048907 Bacteria 4562
198 Ga0496104_0188314 3300048907 Bacteria 1974
199 Ga0496105_0140179 3300048908 Bacteria 1990
200 Ga0496105_0353326 3300048908 Bacteria 1173
201 Ga0496106_0141513 3300048909 Bacteria 1892
202 Ga0496108_0001911 3300048911 Bacteria 16662
203 Ga0496108_0055454 3300048911 Bacteria 3328
204 Ga0496108_0550457 3300048911 Bacteria 1006
205 Ga0496109_0112207 3300048912 Bacteria 2535
206 Ga0496109_0217692 3300048912 Bacteria 1796
207 Ga0496110_0015885 3300048913 Bacteria 6276
208 Ga0496111_0024906 3300048914 Bacteria 4220
209 Ga0496111_0193338 3300048914 Bacteria 1512
210 Ga0496112_0004008 3300048915 Bacteria 12349
211 Ga0496112_0169798 3300048915 Bacteria 2146
212 Ga0496112_0176181 3300048915 Bacteria 2103
213 Ga0496113_0161853 3300048916 Bacteria 1769
214 Ga0496113_0292763 3300048916 Bacteria 1303
215 Ga0496113_0356445 3300048916 Bacteria 1173
216 Ga0496115_0103499 3300048918 Bacteria 2335
217 Ga0496122_0138165 3300048925 Bacteria 1531
218 Ga0496125_0166285 3300048928 Bacteria 1490
219 Ga0501031_0005549 3300049568 Bacteria 8214
220 Ga0501031_0245943 3300049568 Bacteria 1163
221 Ga0501032_0068041 3300049569 Bacteria 2378
222 Ga0501032_0077421 3300049569 Bacteria 2214
223 Ga0501032_0093622 3300049569 Bacteria 1992
224 Ga0501033_0066123 3300049570 Bacteria 2658
225 Ga0501033_0129525 3300049570 Bacteria 1828
226 Ga0501033_0170690 3300049570 Bacteria 1562
227 Ga0501034_0002254 3300049571 Bacteria 23666
228 Ga0501034_0011684 3300049571 Bacteria 9084
229 Ga0501034_0017998 3300049571 Bacteria 7248
230 Ga0501036_0000118 3300049572 Bacteria 49383
231 Ga0501036_0056697 3300049572 Bacteria 3319
232 Ga0501037_0009835 3300049573 Bacteria 7019
233 Ga0501037_0043785 3300049573 Bacteria 3290
234 Ga0501037_0151901 3300049573 Bacteria 1654
235 Ga0501038_0003448 3300049574 Bacteria 14742
236 Ga0501038_0063164 3300049574 Bacteria 3162
237 Ga0501039_0039138 3300049575 Bacteria 3662
238 Ga0501039_0128172 3300049575 Bacteria 1991
239 Ga0501043_0099243 3300049579 Bacteria 2289
240 Ga0501043_0132757 3300049579 Bacteria 1951
241 Ga0501046_0158443 3300049580 Bacteria 1704
242 Ga0501047_0000097 3300049581 Bacteria 107310
243 Ga0501047_0003366 3300049581 Bacteria 15137
244 Ga0501047_0035421 3300049581 Bacteria 4822
245 Ga0501047_0048754 3300049581 Bacteria 4090
246 Ga0501047_0082864 3300049581 Bacteria 3083
247 Ga0501047_0126038 3300049581 Bacteria 2441
248 Ga0501048_0000522 3300049582 Bacteria 26987
249 Ga0501068_0068838 3300049584 Bacteria 2157
250 Ga0501070_0018778 3300049586 Bacteria 5800
251 Ga0501070_0065590 3300049586 Bacteria 3006
252 Ga0501070_0156369 3300049586 Bacteria 1880
253 Ga0501070_0209687 3300049586 Bacteria 1599
254 Ga0501073_0009504 3300049589 Bacteria 7179
255 Ga0501073_0089960 3300049589 Bacteria 2134
256 Ga0501073_0113124 3300049589 Bacteria 1882
257 Ga0501073_0191081 3300049589 Bacteria 1417
258 Ga0501074_0012645 3300049590 Bacteria 6139
259 Ga0501080_0000047 3300049742 Bacteria 76956
260 Ga0501080_0165693 3300049742 Bacteria 2039
261 Ga0501080_0376767 3300049742 Bacteria 1279
262 Ga0501083_0007229 3300049744 Bacteria 7884
263 Ga0501035_0008993 3300049822 Bacteria 9289
264 Ga0501035_0061896 3300049822 Bacteria 3330
265 Ga0501035_0138808 3300049822 Bacteria 2114
266 Ga0501044_0064563 3300049823 Bacteria 3737
267 Ga0501044_0065427 3300049823 Bacteria 3707
268 Ga0501044_0348263 3300049823 Bacteria 1401
269 nmdc:mga03n38_139806_c1 3300050490 Bacteria 1208
270 nmdc:mga00v17_212809_c1 3300050491 Bacteria 1251
271 nmdc:mga06z11_95239_c1 3300050494 Bacteria 1624
272 nmdc:mga05p37_151024_c1 3300050507 Bacteria 2841
273 nmdc:mga08y16_234854_c1 3300050511 Bacteria 1896
274 nmdc:mga08y16_288646_c1 3300050511 Bacteria 1691
275 nmdc:mga0n895_115052_c1 3300050512 Bacteria 2708
276 nmdc:mga0n895_26341_c1 3300050512 Bacteria 5505
277 nmdc:mga0sz30_30675_c1 3300050516 Bacteria 2222
278 Ga0495601_0003630 3300053077 Bacteria 8871
279 Ga0495612_0011756 3300053078 Bacteria 3528
280 Ga0495595_0001408 3300053084 Bacteria 9345
281 Ga0495619_0000309 3300053085 Bacteria 34322
282 Ga0495619_0001222 3300053085 Bacteria 16829
283 Ga0500641_0001701 3300053096 Bacteria 7826
284 Ga0500595_000001 3300053119 Bacteria 1088438
285 Ga0500614_000547 3300053123 Bacteria 9683
286 Ga0500559_0001250 3300053136 Bacteria 14961
287 Ga0500616_0000001 3300053153 Bacteria 1986011
288 Ga0500622_0025609 3300053156 Bacteria 3116
289 Ga0500636_0032943 3300053177 Bacteria 3068
290 Ga0500645_000109 3300053730 Bacteria 65892
291 Ga0501082_0018750 3300060353 Bacteria 5962
292 Ga0501082_0172372 3300060353 Bacteria 1881
293 2643757990 2643221547 Bacteria 4740017
294 2909044454 2909042592 Bacteria 6499737
295 Ga0213875_10016567
296 JGI25404J52841_10004602
297 Ga0070658_10071726
298 Ga0070666_10001254
299 Ga0070682_100052453
300 Ga0068868_100006007
301 Ga0070660_100109104
302 Ga0070689_100017774
303 Ga0070668_100059211
304 Ga0070669_100144663
305 Ga0070674_100067688
306 Ga0070673_100075570
307 Ga0070667_100011934
308 Ga0070714_100014018
309 Ga0070714_100045793
310 Ga0070713_100000749
311 Ga0070713_100059036
312 Ga0070713_100351860
313 Ga0070710_10007104
314 Ga0070711_100064360
315 Ga0070698_100189264
316 Ga0070679_100081740
317 Ga0070684_100012169
318 Ga0070686_100004861
319 Ga0070664_100072515
320 Ga0070702_100051968
321 Ga0068852_100032124
322 Ga0068864_100258103
323 Ga0068863_100154177
324 Ga0068862_100154034
325 Ga0081455_10000002
326 Ga0081455_10015549
327 Ga0081538_10060559
328 Ga0081540_1000166
329 Ga0070717_10039944
330 Ga0070717_10070756
331 Ga0075363_100066001
332 Ga0075364_10036006
333 Ga0070716_100001657
334 Ga0070716_100086986
335 Ga0070712_100087179
336 Ga0075369_10016315
337 Ga0097621_100014206
338 Ga0068871_100005369
339 Ga0075428_100161416
340 Ga0068865_100066721
341 Ga0099795_10001109
342 Ga0111539_10104375
343 Ga0111539_10287874
344 Ga0105247_10009488
345 Ga0105243_10006975
346 Ga0105242_10169541
347 Ga0105238_10034755
348 Ga0157342_1001717
349 Ga0157374_10064601
350 Ga0157372_10114766
351 Ga0157380_10135246
352 Ga0163161_10126098
353 Ga0209025_1045187
354 Ga0207685_10035260
355 Ga0207699_10002977
356 Ga0207699_10030204
357 Ga0207645_10011508
358 Ga0207705_10018481
359 Ga0207693_10002937
360 Ga0207693_10024790
361 Ga0207662_10099913
362 Ga0207657_10014898
363 Ga0207657_10057036
364 Ga0207681_10067587
365 Ga0207687_10170566
366 Ga0207664_10018053
367 Ga0207664_10081559
368 Ga0207664_10165393
369 Ga0207690_10213945
370 Ga0207709_10180332
371 Ga0207665_10004655
372 Ga0207665_10006373
373 Ga0207691_10070228
374 Ga0207711_10011159
375 Ga0207667_10022622
376 Ga0207639_10104717
377 Ga0207678_10008100
378 Ga0207708_10042338
379 Ga0207641_10099099
380 Ga0207683_10001459
381 Ga0268265_10195284
382 Ga0265340_10015122
383 Ga0265313_10020196
384 Ga0265342_10000625
385 Ga0373958_0003303
386 Ga0373959_0005202
387 Ga0373926_0007441
388 Ga0373928_0008731
389 Ga0373934_0030962
390 Ga0373944_0043279
391 Ga0373951_0004364
392 Ga0373923_0009138
393 Ga0373923_0034826
394 Ga0373932_0007946
395 Ga0373936_0082926
396 Ga0373939_0042672
397 Ga0373941_0000168
398 Ga0373953_0023158
399 Ga0373953_0051358
400 Ga0373954_0042624
401 Ga0373954_0077133
402 Ga0373956_0082414
403 Ga0373943_0002492
404 Ga0373946_0002144
405 Ga0373946_0013913
406 Ga0373955_0002083
407 Ga0373942_0002561
408 Ga0373962_0005800
409 Ga0373924_0003012
410 Ga0373931_0007821
411 Ga0373935_0024165
412 Ga0373935_0114099
413 Ga0373935_0115618
414 Ga0373927_0016979
415 Ga0373927_0030598
416 Ga0373933_0001101
417 Ga0373947_0087848
418 Ga0373937_0001232
419 Ga0373937_0036123
420 Ga0373937_0317923
421 Ga0395899_0066702
422 Ga0395900_0034932
423 Ga0395898_0071806
424 Ga0436364_0532105
425 Ga0395901_0269369
426 Ga0436365_1844796
427 Ga0436361_0153303
428 Ga0466963_0049692
429 Ga0466971_0070252
430 Ga0466967_0003202
431 Ga0495592_0000694
432 Ga0495592_0120476
433 Ga0495603_0020227
434 Ga0495629_0000588
435 Ga0495629_0117215
436 Ga0495638_0095358
437 Ga0495651_0000136
438 Ga0495653_0003663
439 Ga0495582_0006066
440 Ga0495639_0007375
441 Ga0495664_0031785
442 Ga0495584_0088395
443 Ga0495585_0008207
444 Ga0495594_0003274
445 Ga0495607_0010697
446 Ga0495618_0003620
447 Ga0495630_0021849
448 Ga0495643_0028413
449 Ga0495644_0001475
450 Ga0495666_0082442
451 Ga0495652_0003608
452 Ga0495665_0059495
453 Ga0495640_0002500
454 Ga0495587_0000753
455 Ga0495645_0013485
456 Ga0495622_0079762
457 Ga0495633_0006799
458 Ga0495667_0000450
459 Ga0495656_0000123
460 Ga0495634_0033166
461 Ga0495635_0029943
462 Ga0495659_0000648
463 Ga0495661_0018960
464 Ga0495588_0008121
465 Ga0495657_0017913
466 Ga0495599_0007497
467 Ga0495623_0003898
468 Ga0495646_0006980
469 Ga0495647_0002969
470 Ga0495647_0030037
471 Ga0495658_0000601
472 Ga0495658_0075191
473 Ga0495613_0027326
474 Ga0495613_0228565
475 Ga0495624_0126497
476 Ga0495670_0012780
477 Ga0495581_0003184
478 Ga0495604_0001199
479 Ga0495674_0000573
480 Ga0495680_0000285
481 Ga0495680_0019326
482 Ga0495675_0005102
483 Ga0495684_0032498
484 Ga0495593_0008712
485 Ga0495602_0017578
486 Ga0496100_0008582
487 Ga0496101_0022170
488 Ga0496102_0168692
489 Ga0496103_0061793
490 Ga0496104_0012293
491 Ga0496104_0037030
492 Ga0496104_0188314
493 Ga0496105_0140179
494 Ga0496105_0353326
495 Ga0496106_0141513
496 Ga0496108_0001911
497 Ga0496108_0055454
498 Ga0496108_0550457
499 Ga0496109_0112207
500 Ga0496109_0217692
501 Ga0496110_0015885
502 Ga0496111_0024906
503 Ga0496111_0193338
504 Ga0496112_0004008
505 Ga0496112_0169798
506 Ga0496112_0176181
507 Ga0496113_0161853
508 Ga0496113_0292763
509 Ga0496113_0356445
510 Ga0496115_0103499
511 Ga0496122_0138165
512 Ga0496125_0166285
513 Ga0501031_0005549
514 Ga0501031_0245943
515 Ga0501032_0068041
516 Ga0501032_0077421
517 Ga0501032_0093622
518 Ga0501033_0066123
519 Ga0501033_0129525
520 Ga0501033_0170690
521 Ga0501034_0002254
522 Ga0501034_0011684
523 Ga0501034_0017998
524 Ga0501036_0000118
525 Ga0501036_0056697
526 Ga0501037_0009835
527 Ga0501037_0043785
528 Ga0501037_0151901
529 Ga0501038_0003448
530 Ga0501038_0063164
531 Ga0501039_0039138
532 Ga0501039_0128172
533 Ga0501043_0099243
534 Ga0501043_0132757
535 Ga0501046_0158443
536 Ga0501047_0000097
537 Ga0501047_0003366
538 Ga0501047_0035421
539 Ga0501047_0048754
540 Ga0501047_0082864
541 Ga0501047_0126038
542 Ga0501048_0000522
543 Ga0501068_0068838
544 Ga0501070_0018778
545 Ga0501070_0065590
546 Ga0501070_0156369
547 Ga0501070_0209687
548 Ga0501073_0009504
549 Ga0501073_0089960
550 Ga0501073_0113124
551 Ga0501073_0191081
552 Ga0501074_0012645
553 Ga0501080_0000047
554 Ga0501080_0165693
555 Ga0501080_0376767
556 Ga0501083_0007229
557 Ga0501035_0008993
558 Ga0501035_0061896
559 Ga0501035_0138808
560 Ga0501044_0064563
561 Ga0501044_0065427
562 Ga0501044_0348263
563 nmdc:mga03n38_139806_c1
564 nmdc:mga00v17_212809_c1
565 nmdc:mga06z11_95239_c1
566 nmdc:mga05p37_151024_c1
567 nmdc:mga08y16_234854_c1
568 nmdc:mga08y16_288646_c1
569 nmdc:mga0n895_115052_c1
570 nmdc:mga0n895_26341_c1
571 nmdc:mga0sz30_30675_c1
572 Ga0495601_0003630
573 Ga0495612_0011756
574 Ga0495595_0001408
575 Ga0495619_0000309
576 Ga0495619_0001222
577 Ga0500641_0001701
578 Ga0500595_000001
579 Ga0500614_000547
580 Ga0500559_0001250
581 Ga0500616_0000001
582 Ga0500622_0025609
583 Ga0500636_0032943
584 Ga0500645_000109
585 Ga0501082_0018750
586 Ga0501082_0172372
587 2643757990
588 2909044454

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01208

URO-D

Uroporphyrinogen decarboxylase (URO-D)

2

342

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1r3q-assembly1.cif.gz_A uroporphyrinogen decarboxylase in complex with coproporphyrinogen-i 0.9649 7 345
1r3w-assembly1.cif.gz_A-2 uroporphyrinogen decarboxylase y164f mutant in complex with coproporphyrinogen-iii 0.9645 7 345
3gw3-assembly1.cif.gz_A-2 human urod mutant k297n 0.9645 7 345
1r3r-assembly1.cif.gz_A-2 uroporphyrinogen decarboxylase with mutation d86n 0.9645 7 345
1r3s-assembly1.cif.gz_A uroporphyrinogen decarboxylase single mutant d86g in complex with coproporphyrinogen-i 0.9644 7 345
ID Description Score Start End Superfamily
1r3sA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9644 7 345 3.20.20.210
af_P32347_4_362_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9479 9 345 3.20.20.210
af_C6TEE8_35_387_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9454 1 346 3.20.20.210
af_C6TEE8_35_387_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9427 1 346 3.20.20.210
1r3sA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9426 7 345 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A5C1WHJ8-F1-model_v4 Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37) 0.996 8 345 GO:0004853
GO:0005829
GO:0019353
AF-A0A1W6ZZY0-F1-model_v4 Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37) 0.9936 8 345 GO:0004853
GO:0005829
GO:0019353
AF-A0A2T1HT94-F1-model_v4 Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37) 0.9914 14 346 GO:0004853
GO:0005829
GO:0019353
AF-A0A2N3E1B1-F1-model_v4 Uroporphyrinogen decarboxylase 0.9888 122 346 GO:0004853
GO:0005829
GO:0019353
AF-A0A4R9PZ60-F1-model_v4 Uroporphyrinogen decarboxylase 0.9881 141 239 GO:0004853
GO:0005829
GO:0019353

Map