F391729

General Info

Members Datasets Scaffolds Average Seq Length
293 225 586 613

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0000070|Ga0501032_0000070_4881_7109
Length 737
Sequence MTNENCTVSCPLLSSPREREYVEPCPINLKWNFSGIPVYNPAMEKSVAQDFDVIVVGGGHAGCEARMGARTALLTHKLSTIGVMSCNPAIGGLGKGHLVREIDALDGLMGRVTDLSGIQFRMLNASKGPAVRGPRAQADRKLYREAMQSILSSYPNLTLLEGSAEDLVLGQDGGIEGLAVVLSDEGLKTFEGAALSAENPCFIGLNSQAVHKSGGSAHSSNPAKNAPSSSLDNGSPPVSCRELCKTSIIIKCRAVVLTTGTFLRGIIHRGEEQIPAGRVGEEPAIGMAKTLEKLGFPLGRLKTGTPARLDGKTIDWTVLEEQKGDEPPIPFSYMTDYIRVPQIACYITYTNENTHEVIRENIHRSAMYSGQISGTGPRYCPSIEDKVTRFADKTRHQVFLEPEGLNDDTIYPNGISTSLPAEVQEAYIKTIPGLENVRILEPGYAIEYDYCDPRDLKASLESRRVGGLFLAGQINGTTGYEEAAAQGLMAGINAALQYRENVSRETFSPFVLDRAEAYIGVLIDDLITGGAPEPYRMFTSRAEYRLRLRADNADQRLTNRGLEIGCIGPERAKAWIQKSANLMAAREMCRNLKATPNEMEKHGIEINKDGVRRSVLELLAYPDIGWLTLATVWPELGSIKSDIREQIEYDALYAGYMERHDLDILTFRKSEALELPEDMDYELVGSLSNEVRQKLQQARPATLGAAGRIPGVTPAALVSLLKFARSNQRKSGIKNVA

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
82 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
83 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
84 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
85 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
86 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
87 3300041502 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaT Metatranscriptome Unclassified
88 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
89 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
90 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
91 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
92 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
93 3300041907 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaT_extra_run Metatranscriptome Unclassified
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
96 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
97 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
100 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
101 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
104 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
105 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
146 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
147 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
150 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
154 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
155 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
158 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
159 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
160 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
161 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
162 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
163 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
164 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
165 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
166 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
167 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
168 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
169 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
170 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
171 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
172 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
173 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
174 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
175 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
176 2718217882 Rhizobium sp. N741 Isolate Nodule
177 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
178 2791355267 Rhizobium sp. L18 Isolate Nodule
179 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
180 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
181 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
182 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
183 2838048938 Rhizobium pisi 27/80 Isolate Nodule
184 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
185 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
186 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
187 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
188 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
189 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
190 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
191 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
192 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
193 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
194 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
195 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
196 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
197 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
198 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
199 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
200 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
201 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
202 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
203 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
204 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
205 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
206 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
207 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
208 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
209 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
210 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
211 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
212 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
213 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
214 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
215 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
216 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
217 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
218 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
219 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
220 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
221 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
222 2936381700 Rhizobium chutanense C16 Isolate Unclassified
223 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
224 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
225 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 75.77
Metatranscriptomes 1.02
Isolates 23.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.04
Nodule 18.77
Rhizoplane 1.71
Rhizosphere 50.51
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0000070 3300049569 Bacteria 86244
2 JGI25151J46595_10000879 3300003187 Bacteria 23723
3 JGI25406J46586_10004564 3300003203 Bacteria 6446
4 JGI25153J46596_10000067 3300003215 Bacteria 118869
5 JGI25153J46596_10000759 3300003215 Bacteria 19719
6 rootH2_10008846 3300003320 Bacteria 34236
7 Ga0055526_1007505 3300003771 Bacteria 5649
8 Ga0055528_1001257 3300003790 Bacteria 16081
9 Ga0055528_1004002 3300003790 Bacteria 7209
10 Ga0055540_1000597 3300003792 Bacteria 26126
11 Ga0055531_10005608 3300003794 Bacteria 7305
12 Ga0070676_10000003 3300005328 Bacteria 204138
13 Ga0070683_100034994 3300005329 Bacteria 4591
14 Ga0070683_100101191 3300005329 Bacteria 2713
15 Ga0070682_100016660 3300005337 Bacteria 4277
16 Ga0070691_10001505 3300005341 Bacteria 10008
17 Ga0070669_100025039 3300005353 Bacteria 4283
18 Ga0070667_100059804 3300005367 Bacteria 3224
19 Ga0070700_100074154 3300005441 Bacteria 2180
20 Ga0070663_100002708 3300005455 Bacteria 10029
21 Ga0070698_100014807 3300005471 Bacteria 8243
22 Ga0070693_100001378 3300005547 Bacteria 10950
23 Ga0070665_100000726 3300005548 Bacteria 43911
24 Ga0070665_100007829 3300005548 Bacteria 10839
25 Ga0068855_100001793 3300005563 Bacteria 26842
26 Ga0068855_100023927 3300005563 Bacteria 7315
27 Ga0068857_100009506 3300005577 Bacteria 8442
28 Ga0068854_100000002 3300005578 Bacteria 362695
29 Ga0068856_100008475 3300005614 Bacteria 10005
30 Ga0068858_100065647 3300005842 Bacteria 3358
31 Ga0081455_10024101 3300005937 Bacteria 5644
32 Ga0081539_10000293 3300005985 Bacteria 113398
33 Ga0070717_10021959 3300006028 Bacteria 5036
34 Ga0075368_10004278 3300006042 Bacteria 4824
35 Ga0075367_10003813 3300006178 Bacteria 7267
36 Ga0075367_10031257 3300006178 Bacteria 3056
37 Ga0079104_1000310 3300006946 Bacteria 61815
38 Ga0105240_10000869 3300009093 Bacteria 54453
39 Ga0105240_10200036 3300009093 Bacteria 2342
40 Ga0111539_10000634 3300009094 Bacteria 45403
41 Ga0111539_10015001 3300009094 Bacteria 9656
42 Ga0105241_10016865 3300009174 Bacteria 5361
43 Ga0105237_10054498 3300009545 Bacteria 4007
44 Ga0105238_10089114 3300009551 Bacteria 3072
45 Ga0123342_1006148 3300009766 Bacteria 16842
46 Ga0157378_10014517 3300013297 Bacteria 6896
47 Ga0157378_10025683 3300013297 Bacteria 5187
48 Ga0157372_10010410 3300013307 Bacteria 9887
49 Ga0157372_10199799 3300013307 Bacteria 2316
50 Ga0206356_10767868 3300020070 Bacteria 6467
51 Ga0213872_10005204 3300021361 Bacteria 6730
52 Ga0213875_10008219 3300021388 Bacteria 5356
53 Ga0213871_10000318 3300021441 Bacteria 6140
54 Ga0209148_1000290 3300025254 Bacteria 75276
55 Ga0209455_1001982 3300025272 Bacteria 8389
56 Ga0209673_1000050 3300025273 Bacteria 285287
57 Ga0209673_1001845 3300025273 Bacteria 17300
58 Ga0209673_1009772 3300025273 Bacteria 4115
59 Ga0209676_1003603 3300025292 Bacteria 9324
60 Ga0209564_1000227 3300025295 Bacteria 125497
61 Ga0209758_1000406 3300025297 Bacteria 73962
62 Ga0209758_1003168 3300025297 Bacteria 15434
63 Ga0209758_1022210 3300025297 Bacteria 2922
64 Ga0209050_1002699 3300025298 Bacteria 14431
65 Ga0209050_1004678 3300025298 Bacteria 9092
66 Ga0209256_1001610 3300025299 Bacteria 22074
67 Ga0209256_1008010 3300025299 Bacteria 5018
68 Ga0209051_1000118 3300025303 Bacteria 149426
69 Ga0209051_1000822 3300025303 Bacteria 32088
70 Ga0209051_1008647 3300025303 Bacteria 5361
71 Ga0209257_1003194 3300025304 Bacteria 14537
72 Ga0209257_1008273 3300025304 Bacteria 5971
73 Ga0207645_10000003 3300025907 Bacteria 273622
74 Ga0207684_10031973 3300025910 Bacteria 4476
75 Ga0207707_10038547 3300025912 Bacteria 4175
76 Ga0207695_10141373 3300025913 Bacteria 2355
77 Ga0207667_10001416 3300025949 Bacteria 30034
78 Ga0207667_10002117 3300025949 Bacteria 24868
79 Ga0207640_10000006 3300025981 Bacteria 313289
80 Ga0207678_10001223 3300026067 Bacteria 23614
81 Ga0207678_10041477 3300026067 Bacteria 3991
82 Ga0207702_10069085 3300026078 Bacteria 3036
83 Ga0207674_10031607 3300026116 Bacteria 5559
84 Ga0207683_10007078 3300026121 Bacteria 9615
85 Ga0209281_1000028 3300027111 Bacteria 440027
86 Ga0207428_10000460 3300027907 Bacteria 49066
87 Ga0268266_10002049 3300028379 Bacteria 22350
88 Ga0268266_10043820 3300028379 Bacteria 3824
89 Ga0307515_10012908 3300028794 Bacteria 15667
90 Ga0265338_10000238 3300028800 Bacteria 101800
91 Ga0265338_10009454 3300028800 Bacteria 11618
92 Ga0265313_10000080 3300031595 Bacteria 95370
93 Ga0316575_10002657 3300031665 Bacteria 6025
94 Ga0307410_10000154 3300031852 Bacteria 24677
95 Ga0307409_100003698 3300031995 Bacteria 8389
96 Ga0307411_10001634 3300032005 Bacteria 9351
97 Ga0307411_10016178 3300032005 Bacteria 4217
98 Ga0307411_10061074 3300032005 Bacteria 2507
99 Ga0316574_0062368 3300035398 Bacteria 2343
100 Ga0395898_0050290 3300037466 Bacteria 4080
101 Ga0436364_0100220 3300037853 Bacteria 61250
102 Ga0395901_0037729 3300038443 Bacteria 4997
103 Ga0436360_0883853 3300039438 Bacteria 16325
104 Ga0436361_1079798 3300039447 Bacteria 3475
105 Ga0436362_0319257 3300039453 Bacteria 2603
106 Ga0451833_0300630 3300041491 Bacteria 2664
107 Ga0451833_0618409 3300041491 Bacteria 4544
108 Ga0451835_0566448 3300041492 Bacteria 5027
109 Ga0451837_0683715 3300041494 Bacteria 4035
110 Ga0451839_0010501 3300041496 Bacteria 4350
111 Ga0451839_0700287 3300041496 Bacteria 5817
112 Ga0451841_0124336 3300041498 Bacteria 2695
113 Ga0451841_1355046 3300041498 Bacteria 4437
114 Ga0451845_0386348 3300041501 Bacteria 3526
115 Ga0451845_0566108 3300041501 Bacteria 3281
116 Ga0451846_16062 3300041502 Bacteria 4334
117 Ga0451847_0210332 3300041503 Bacteria 2970
118 Ga0451847_0660155 3300041503 Bacteria 2865
119 Ga0451849_0152888 3300041505 Bacteria 2543
120 Ga0451849_0528574 3300041505 Bacteria 2805
121 Ga0451843_0102315 3300041509 Bacteria 4344
122 Ga0451855_0150860 3300041511 Bacteria 3329
123 Ga0451853_3077263 3300041512 Bacteria 2913
124 Ga0452268_41316 3300041907 Bacteria 2643
125 Ga0451576_0001556 3300045051 Bacteria 38648
126 Ga0495605_0005548 3300046474 Bacteria 7337
127 Ga0495607_0009290 3300046501 Bacteria 6668
128 Ga0495583_0002526 3300046506 Bacteria 15489
129 Ga0495606_0008486 3300046507 Bacteria 8914
130 Ga0495610_0017190 3300046512 Bacteria 4130
131 Ga0495610_0019395 3300046512 Bacteria 3807
132 Ga0495620_0015000 3300046515 Bacteria 3921
133 Ga0495632_0002260 3300046519 Bacteria 14836
134 Ga0495632_0004424 3300046519 Bacteria 9551
135 Ga0495648_0023661 3300046524 Bacteria 4200
136 Ga0495654_0000143 3300046530 Bacteria 74495
137 Ga0495597_0003665 3300046542 Bacteria 8821
138 Ga0495656_0019148 3300046615 Bacteria 2639
139 Ga0495625_0032944 3300046660 Bacteria 3836
140 Ga0495670_0010813 3300046691 Bacteria 4484
141 Ga0495660_0008098 3300046810 Bacteria 6173
142 Ga0495660_0052562 3300046810 Bacteria 2213
143 Ga0495636_0027881 3300047318 Bacteria 2301
144 Ga0495687_012663 3300047443 Bacteria 4446
145 Ga0495686_0050175 3300047472 Bacteria 2622
146 Ga0496101_0010118 3300048904 Bacteria 6220
147 Ga0496104_0008422 3300048907 Bacteria 9169
148 Ga0496109_0036354 3300048912 Bacteria 4445
149 Ga0496110_0037462 3300048913 Bacteria 4215
150 Ga0496115_0045986 3300048918 Bacteria 3486
151 Ga0496118_0032016 3300048921 Bacteria 4344
152 Ga0496121_0017687 3300048924 Bacteria 7256
153 Ga0496126_0026098 3300048929 Bacteria 5609
154 Ga0496126_0039035 3300048929 Bacteria 4411
155 Ga0501031_0047222 3300049568 Bacteria 2807
156 Ga0501032_0004479 3300049569 Bacteria 10517
157 Ga0501032_0004728 3300049569 Bacteria 10220
158 Ga0501033_0000771 3300049570 Bacteria 29428
159 Ga0501034_0000001 3300049571 Bacteria 2184493
160 Ga0501034_0000046 3300049571 Bacteria 224049
161 Ga0501034_0001975 3300049571 Bacteria 25989
162 Ga0501034_0123362 3300049571 Bacteria 2576
163 Ga0501036_0049670 3300049572 Bacteria 3552
164 Ga0501036_0060720 3300049572 Bacteria 3202
165 Ga0501036_0074133 3300049572 Bacteria 2878
166 Ga0501037_0001871 3300049573 Bacteria 15284
167 Ga0501037_0004361 3300049573 Bacteria 10270
168 Ga0501037_0018717 3300049573 Bacteria 5104
169 Ga0501038_0001560 3300049574 Bacteria 21194
170 Ga0501038_0064478 3300049574 Bacteria 3124
171 Ga0501039_0000001 3300049575 Bacteria 449008
172 Ga0501039_0000076 3300049575 Bacteria 74183
173 Ga0501039_0022308 3300049575 Bacteria 4860
174 Ga0501039_0042227 3300049575 Bacteria 3523
175 Ga0501043_0000636 3300049579 Bacteria 31054
176 Ga0501043_0020704 3300049579 Bacteria 5160
177 Ga0501043_0023521 3300049579 Bacteria 4833
178 Ga0501046_0001018 3300049580 Bacteria 27339
179 Ga0501046_0004370 3300049580 Bacteria 12852
180 Ga0501047_0000386 3300049581 Bacteria 49479
181 Ga0501047_0010582 3300049581 Bacteria 8724
182 Ga0501047_0077006 3300049581 Bacteria 3209
183 Ga0501048_0000691 3300049582 Bacteria 24520
184 Ga0501067_0001735 3300049583 Bacteria 11990
185 Ga0501069_0006016 3300049585 Bacteria 6330
186 Ga0501070_0009076 3300049586 Bacteria 8412
187 Ga0501070_0032105 3300049586 Bacteria 4396
188 Ga0501070_0067963 3300049586 Bacteria 2951
189 Ga0501073_0002443 3300049589 Bacteria 13878
190 Ga0501075_0072137 3300049591 Bacteria 2610
191 Ga0501080_0000368 3300049742 Bacteria 34850
192 Ga0501080_0003970 3300049742 Bacteria 13101
193 Ga0501035_0000104 3300049822 Bacteria 105594
194 Ga0501035_0014884 3300049822 Bacteria 7179
195 Ga0501035_0052695 3300049822 Bacteria 3640
196 Ga0501035_0056716 3300049822 Bacteria 3494
197 Ga0501044_0000020 3300049823 Bacteria 213460
198 Ga0501044_0014694 3300049823 Bacteria 8442
199 Ga0501044_0043328 3300049823 Bacteria 4676
200 Ga0501044_0055637 3300049823 Bacteria 4063
201 Ga0501044_0092304 3300049823 Bacteria 3053
202 Ga0501044_0150067 3300049823 Bacteria 2314
203 nmdc:mga0yw44_1628_c1 3300050492 Bacteria 9032
204 nmdc:mga0qj67_48941_c1 3300050509 Bacteria 3340
205 nmdc:mga08y16_25760_c1 3300050511 Bacteria 6206
206 nmdc:mga08y16_96_c1 3300050511 Bacteria 74719
207 Ga0500578_0019247 3300053086 Bacteria 4382
208 Ga0500651_0017022 3300053093 Bacteria 4475
209 Ga0500641_0000997 3300053096 Bacteria 10075
210 Ga0500569_004305 3300053109 Bacteria 2982
211 Ga0500595_000063 3300053119 Bacteria 77357
212 Ga0500595_004087 3300053119 Bacteria 6623
213 Ga0500652_000234 3300053131 Bacteria 21234
214 Ga0500658_0001925 3300053134 Bacteria 8127
215 Ga0500658_0010922 3300053134 Bacteria 3350
216 Ga0500588_0001013 3300053146 Bacteria 5060
217 Ga0500590_000271 3300053148 Bacteria 16202
218 Ga0500616_0001456 3300053153 Bacteria 22607
219 Ga0500622_0003398 3300053156 Bacteria 10704
220 Ga0500627_0001834 3300053158 Bacteria 6063
221 Ga0500633_0010616 3300053160 Bacteria 2473
222 Ga0500636_0000359 3300053177 Bacteria 24993
223 Ga0501082_0014764 3300060353 Bacteria 6726
224 Ga0501082_0055786 3300060353 Bacteria 3403
225 Ga0530510_0007586 3300061734 Bacteria 7558
226 2509389232 2509276021 Bacteria 7634384
227 2510896882 2510461076 Bacteria 8618824
228 2513572878 2513237084 Bacteria 7231967
229 2513580411 2513237085 Bacteria 7695351
230 2514023180 2513237162 Bacteria 7468464
231 2515634985 2515154113 Bacteria 7807172
232 2515644451 2515154114 Bacteria 7848616
233 2515660972 2515154116 Bacteria 7552979
234 2515741778 2515154134 Bacteria 7220242
235 2517078516 2516653085 Bacteria 7346596
236 2517097255 2517093000 Bacteria 7412387
237 2517408356 2517287029 Bacteria 6905599
238 2585231869 2582581299 Bacteria 6518058
239 2585529185 2585427526 Bacteria 7258840
240 2585998079 2585427633 Bacteria 6413184
241 2586002658 2585427634 Bacteria 6455027
242 2644194646 2643221634 Bacteria 6705461
243 2644240311 2643221643 Bacteria 5749658
244 2719183134 2718217882 Bacteria 6556348
245 2719667474 2718217997 Bacteria 6740740
246 2793366074 2791355267 Bacteria 7222458
247 2805930913 2802429605 Bacteria 6875453
248 2805936762 2802429606 Bacteria 6346811
249 2821129205 2821123053 Bacteria 7836056
250 2838046760 2838042994 Bacteria 6046894
251 2838050989 2838048938 Bacteria 6044578
252 2838683705 2838680041 Bacteria 6545511
253 2838693349 2838686498 Bacteria 7807632
254 2838698233 2838694306 Bacteria 6853137
255 2838711348 2838707686 Bacteria 6619912
256 2838735343 2838729681 Bacteria 7400765
257 2838742222 2838736955 Bacteria 5760694
258 2838748108 2838742623 Bacteria 7396178
259 2841846078 2841840854 Bacteria 5761912
260 2841857415 2841851746 Bacteria 7532261
261 2842081149 2842077413 Bacteria 6508645
262 2842122074 2842118031 Bacteria 7033875
263 2842145782 2842140634 Bacteria 5759631
264 2842162410 2842156927 Bacteria 6894975
265 2842166889 2842163707 Bacteria 6916235
266 2842186050 2842180545 Bacteria 6888678
267 2842235509 2842229732 Bacteria 7475766
268 2842241088 2842237096 Bacteria 6620661
269 2842249208 2842243621 Bacteria 7421798
270 2842263163 2842257432 Bacteria 7401195
271 2842277817 2842271015 Bacteria 7807131
272 2842294806 2842291075 Bacteria 7076806
273 2842305640 2842304105 Bacteria 7023636
274 2842366095 2842363717 Bacteria 6844742
275 2842375176 2842370503 Bacteria 7038661
276 2842388275 2842384541 Bacteria 7057858
277 2844456802 2844454524 Bacteria 7952546
278 2857536146 2857531043 Bacteria 6754041
279 2883359920 2883354860 Bacteria 5865246
280 2894775847 2894772417 Bacteria 5305674
281 2898799184 2898795034 Bacteria 4294459
282 2899805009 2899803654 Bacteria 5577784
283 2919176881 2919171160 Bacteria 6499771
284 2923559968 2923556063 Bacteria 6793593
285 2929200080 2929199973 Bacteria 7260745
286 2933572147 2933570622 Bacteria 7023390
287 2935898114 2935894831 Bacteria 6620579
288 2935903444 2935901341 Bacteria 7341747
289 2936379258 2936375103 Bacteria 6652732
290 2936381765 2936381700 Bacteria 7006523
291 8005309702 8005307578 Bacteria 7395396
292 8023686733 8023680758 Bacteria 7729763
293 8055915303 8055909800 Bacteria 7278581
294 Ga0501032_0000070
295 JGI25151J46595_10000879
296 JGI25406J46586_10004564
297 JGI25153J46596_10000067
298 JGI25153J46596_10000759
299 rootH2_10008846
300 Ga0055526_1007505
301 Ga0055528_1001257
302 Ga0055528_1004002
303 Ga0055540_1000597
304 Ga0055531_10005608
305 Ga0070676_10000003
306 Ga0070683_100034994
307 Ga0070683_100101191
308 Ga0070682_100016660
309 Ga0070691_10001505
310 Ga0070669_100025039
311 Ga0070667_100059804
312 Ga0070700_100074154
313 Ga0070663_100002708
314 Ga0070698_100014807
315 Ga0070693_100001378
316 Ga0070665_100000726
317 Ga0070665_100007829
318 Ga0068855_100001793
319 Ga0068855_100023927
320 Ga0068857_100009506
321 Ga0068854_100000002
322 Ga0068856_100008475
323 Ga0068858_100065647
324 Ga0081455_10024101
325 Ga0081539_10000293
326 Ga0070717_10021959
327 Ga0075368_10004278
328 Ga0075367_10003813
329 Ga0075367_10031257
330 Ga0079104_1000310
331 Ga0105240_10000869
332 Ga0105240_10200036
333 Ga0111539_10000634
334 Ga0111539_10015001
335 Ga0105241_10016865
336 Ga0105237_10054498
337 Ga0105238_10089114
338 Ga0123342_1006148
339 Ga0157378_10014517
340 Ga0157378_10025683
341 Ga0157372_10010410
342 Ga0157372_10199799
343 Ga0206356_10767868
344 Ga0213872_10005204
345 Ga0213875_10008219
346 Ga0213871_10000318
347 Ga0209148_1000290
348 Ga0209455_1001982
349 Ga0209673_1000050
350 Ga0209673_1001845
351 Ga0209673_1009772
352 Ga0209676_1003603
353 Ga0209564_1000227
354 Ga0209758_1000406
355 Ga0209758_1003168
356 Ga0209758_1022210
357 Ga0209050_1002699
358 Ga0209050_1004678
359 Ga0209256_1001610
360 Ga0209256_1008010
361 Ga0209051_1000118
362 Ga0209051_1000822
363 Ga0209051_1008647
364 Ga0209257_1003194
365 Ga0209257_1008273
366 Ga0207645_10000003
367 Ga0207684_10031973
368 Ga0207707_10038547
369 Ga0207695_10141373
370 Ga0207667_10001416
371 Ga0207667_10002117
372 Ga0207640_10000006
373 Ga0207678_10001223
374 Ga0207678_10041477
375 Ga0207702_10069085
376 Ga0207674_10031607
377 Ga0207683_10007078
378 Ga0209281_1000028
379 Ga0207428_10000460
380 Ga0268266_10002049
381 Ga0268266_10043820
382 Ga0307515_10012908
383 Ga0265338_10000238
384 Ga0265338_10009454
385 Ga0265313_10000080
386 Ga0316575_10002657
387 Ga0307410_10000154
388 Ga0307409_100003698
389 Ga0307411_10001634
390 Ga0307411_10016178
391 Ga0307411_10061074
392 Ga0316574_0062368
393 Ga0395898_0050290
394 Ga0436364_0100220
395 Ga0395901_0037729
396 Ga0436360_0883853
397 Ga0436361_1079798
398 Ga0436362_0319257
399 Ga0451833_0300630
400 Ga0451833_0618409
401 Ga0451835_0566448
402 Ga0451837_0683715
403 Ga0451839_0010501
404 Ga0451839_0700287
405 Ga0451841_0124336
406 Ga0451841_1355046
407 Ga0451845_0386348
408 Ga0451845_0566108
409 Ga0451846_16062
410 Ga0451847_0210332
411 Ga0451847_0660155
412 Ga0451849_0152888
413 Ga0451849_0528574
414 Ga0451843_0102315
415 Ga0451855_0150860
416 Ga0451853_3077263
417 Ga0452268_41316
418 Ga0451576_0001556
419 Ga0495605_0005548
420 Ga0495607_0009290
421 Ga0495583_0002526
422 Ga0495606_0008486
423 Ga0495610_0017190
424 Ga0495610_0019395
425 Ga0495620_0015000
426 Ga0495632_0002260
427 Ga0495632_0004424
428 Ga0495648_0023661
429 Ga0495654_0000143
430 Ga0495597_0003665
431 Ga0495656_0019148
432 Ga0495625_0032944
433 Ga0495670_0010813
434 Ga0495660_0008098
435 Ga0495660_0052562
436 Ga0495636_0027881
437 Ga0495687_012663
438 Ga0495686_0050175
439 Ga0496101_0010118
440 Ga0496104_0008422
441 Ga0496109_0036354
442 Ga0496110_0037462
443 Ga0496115_0045986
444 Ga0496118_0032016
445 Ga0496121_0017687
446 Ga0496126_0026098
447 Ga0496126_0039035
448 Ga0501031_0047222
449 Ga0501032_0004479
450 Ga0501032_0004728
451 Ga0501033_0000771
452 Ga0501034_0000001
453 Ga0501034_0000046
454 Ga0501034_0001975
455 Ga0501034_0123362
456 Ga0501036_0049670
457 Ga0501036_0060720
458 Ga0501036_0074133
459 Ga0501037_0001871
460 Ga0501037_0004361
461 Ga0501037_0018717
462 Ga0501038_0001560
463 Ga0501038_0064478
464 Ga0501039_0000001
465 Ga0501039_0000076
466 Ga0501039_0022308
467 Ga0501039_0042227
468 Ga0501043_0000636
469 Ga0501043_0020704
470 Ga0501043_0023521
471 Ga0501046_0001018
472 Ga0501046_0004370
473 Ga0501047_0000386
474 Ga0501047_0010582
475 Ga0501047_0077006
476 Ga0501048_0000691
477 Ga0501067_0001735
478 Ga0501069_0006016
479 Ga0501070_0009076
480 Ga0501070_0032105
481 Ga0501070_0067963
482 Ga0501073_0002443
483 Ga0501075_0072137
484 Ga0501080_0000368
485 Ga0501080_0003970
486 Ga0501035_0000104
487 Ga0501035_0014884
488 Ga0501035_0052695
489 Ga0501035_0056716
490 Ga0501044_0000020
491 Ga0501044_0014694
492 Ga0501044_0043328
493 Ga0501044_0055637
494 Ga0501044_0092304
495 Ga0501044_0150067
496 nmdc:mga0yw44_1628_c1
497 nmdc:mga0qj67_48941_c1
498 nmdc:mga08y16_25760_c1
499 nmdc:mga08y16_96_c1
500 Ga0500578_0019247
501 Ga0500651_0017022
502 Ga0500641_0000997
503 Ga0500569_004305
504 Ga0500595_000063
505 Ga0500595_004087
506 Ga0500652_000234
507 Ga0500658_0001925
508 Ga0500658_0010922
509 Ga0500588_0001013
510 Ga0500590_000271
511 Ga0500616_0001456
512 Ga0500622_0003398
513 Ga0500627_0001834
514 Ga0500633_0010616
515 Ga0500636_0000359
516 Ga0501082_0014764
517 Ga0501082_0055786
518 Ga0530510_0007586
519 2509389232
520 2510896882
521 2513572878
522 2513580411
523 2514023180
524 2515634985
525 2515644451
526 2515660972
527 2515741778
528 2517078516
529 2517097255
530 2517408356
531 2585231869
532 2585529185
533 2585998079
534 2586002658
535 2644194646
536 2644240311
537 2719183134
538 2719667474
539 2793366074
540 2805930913
541 2805936762
542 2821129205
543 2838046760
544 2838050989
545 2838683705
546 2838693349
547 2838698233
548 2838711348
549 2838735343
550 2838742222
551 2838748108
552 2841846078
553 2841857415
554 2842081149
555 2842122074
556 2842145782
557 2842162410
558 2842166889
559 2842186050
560 2842235509
561 2842241088
562 2842249208
563 2842263163
564 2842277817
565 2842294806
566 2842305640
567 2842366095
568 2842375176
569 2842388275
570 2844456802
571 2857536146
572 2883359920
573 2894775847
574 2898799184
575 2899805009
576 2919176881
577 2923559968
578 2929200080
579 2933572147
580 2935898114
581 2935903444
582 2936379258
583 2936381765
584 8005309702
585 8023686733
586 8055915303

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01134

GIDA

Glucose inhibited division protein A

241

502

0.98

PF13932

GIDA_C

tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

665

721

0.98

PF21680

GIDA_C_1st

tRNA modifying enzyme MnmG/GidA C-terminal helical domain

569

661

0.96

PF01134

GIDA

Glucose inhibited division protein A

52

202

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cp8-assembly2.cif.gz_D crystal structure of gida from chlorobium tepidum 0.9011 4 529
3cp8-assembly2.cif.gz_C crystal structure of gida from chlorobium tepidum 0.8999 4 588
3ces-assembly2.cif.gz_C crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.8965 3 520
3g05-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8964 1 520
3ces-assembly1.cif.gz_B crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.893 3 519
ID Description Score Start End Superfamily
af_F1R509_326_489_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9556 271 432 3.50.50.60
3cesC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9537 172 319 2.40.30.260
2zxiA04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;GidA associated domain, C-terminal subdomain 0.9428 540 590 1.10.150.570
3cesC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.94 172 319 2.40.30.260
2zxhA04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;GidA associated domain, C-terminal subdomain 0.9395 540 590 1.10.150.570
ID Description Score Start End GO Terms
AF-A0A3B9GUP0-F1-model_v4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A) 0.979 187 347 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-A0A212Q9T3-F1-model_v4 deleted 0.9768 2 491
AF-A0A3S1VPU5-F1-model_v4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A) 0.9767 4 494 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-A0A0F8WWH1-F1-model_v4 MnmG N-terminal domain-containing protein 0.9758 122 450 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-A0A6G2DCJ3-F1-model_v4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A) 0.9757 181 386 GO:0002098
GO:0005829
GO:0030488
GO:0050660

Map