F391617

General Info

Members Datasets Scaffolds Average Seq Length
293 213 586 394

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0739482|Ga0436365_0739482_3868_5286
Length 472
Sequence MSGTLPTIFWFDAGKKWIIRDGRTGISRTGAGAPTARGRKKSFAVTMGTEDRQTGTVSTMYEWSDEQLMVRDAVRQFIDKEIRPNIDELEHGDTPPYDVLRKLFATFGMDSAARERFKKQIEFEKSVAEAQAKGEAPPERPVREGDGGGASLTLIPIIELCRVCPGMVTAMGVSMGLTSAAINAKGTIAQKERWVPELLTMEKIGAWAITEPGSGSDAFGSMRSTARRDGDEYVLNGSKTFITNGPYADTIVFICKLDEGNQPAERKVLSFVLDRGMPGLEQSKPLRKMGMHSSPTGELFLTDVRVGRERLVGETEDVAAGGREGAKATFMQERSGVAAMALGIIEECLERSVQYARDRVQFGQPIGDFQLIQDKLARMEVARLNVQNLVFRTVEMSSAGRSMTLAEASAMKLYSARAAVEVAMEAVQIFGGNGYMSEFRVEQLARDAKVLQIYAGTDEIQITHIAKDLLRG

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
75 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
94 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
95 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
96 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
105 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
108 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
109 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
121 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
122 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
134 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
135 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
163 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
164 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
178 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
179 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
180 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
181 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
182 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
184 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
185 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
186 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
187 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
188 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
189 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
192 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 2547132424 Nocardia nova SH22a Isolate Unclassified
196 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
197 2643221576 Nocardioides sp. Root614 Isolate Unclassified
198 2643221590 Nocardioides sp. Root682 Isolate Unclassified
199 2643221692 Nocardia sp. Root136 Isolate Unclassified
200 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
201 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
202 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
203 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
204 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
205 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
206 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
207 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
208 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
209 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
210 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
211 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
212 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
213 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.15
Metatranscriptomes 0.68
Isolates 7.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.92
Nodule 1.02
Rhizoplane 5.46
Rhizosphere 71.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0739482 3300039437 Bacteria 7246
2 Ga0070658_10004424 3300005327 Bacteria 11446
3 Ga0070680_100012774 3300005336 Bacteria 6531
4 Ga0070660_100190777 3300005339 Bacteria 1660
5 Ga0070689_100078013 3300005340 Bacteria 2597
6 Ga0070668_100003456 3300005347 Bacteria 11662
7 Ga0070668_100069041 3300005347 Bacteria 2749
8 Ga0070669_100001042 3300005353 Bacteria 20259
9 Ga0070667_100000562 3300005367 Bacteria 36767
10 Ga0070667_100018136 3300005367 Bacteria 5837
11 Ga0070714_100051478 3300005435 Bacteria 3511
12 Ga0070713_100077977 3300005436 Bacteria 2819
13 Ga0070708_100014384 3300005445 Bacteria 6509
14 Ga0070681_10115035 3300005458 Bacteria 2628
15 Ga0070698_100060586 3300005471 Bacteria 3820
16 Ga0070679_100025036 3300005530 Bacteria 5852
17 Ga0070696_100047585 3300005546 Bacteria 2976
18 Ga0070665_100007010 3300005548 Bacteria 11452
19 Ga0068859_100000984 3300005617 Bacteria 29203
20 Ga0068863_100002213 3300005841 Bacteria 19310
21 Ga0068858_100001354 3300005842 Bacteria 25227
22 Ga0068860_100000112 3300005843 Bacteria 130953
23 Ga0068862_100004926 3300005844 Bacteria 11239
24 Ga0068862_100024121 3300005844 Bacteria 5101
25 Ga0081455_10048302 3300005937 Bacteria 3678
26 Ga0081538_10052563 3300005981 Bacteria 2433
27 Ga0075365_10049644 3300006038 Bacteria 2765
28 Ga0075365_10123559 3300006038 Bacteria 1787
29 Ga0075363_100002167 3300006048 Bacteria 7901
30 Ga0075363_100015661 3300006048 Bacteria 3731
31 Ga0075364_10012098 3300006051 Bacteria 5267
32 Ga0075364_10049049 3300006051 Bacteria 2752
33 Ga0075364_10118037 3300006051 Bacteria 1774
34 Ga0070715_10031316 3300006163 Bacteria 2158
35 Ga0070716_100082188 3300006173 Bacteria 1926
36 Ga0075369_10008341 3300006186 Bacteria 3984
37 Ga0075370_10028490 3300006353 Bacteria 3104
38 Ga0075428_100000002 3300006844 Bacteria 546374
39 Ga0075428_100029667 3300006844 Bacteria 6052
40 Ga0075428_100042805 3300006844 Bacteria 4979
41 Ga0075431_100094078 3300006847 Bacteria 3093
42 Ga0075434_100249698 3300006871 Bacteria 1793
43 Ga0097620_100000984 3300006931 Bacteria 29203
44 Ga0111539_10017024 3300009094 Bacteria 8997
45 Ga0111539_10020082 3300009094 Bacteria 8230
46 Ga0111539_10037739 3300009094 Bacteria 5832
47 Ga0105247_10000007 3300009101 Bacteria 409490
48 Ga0114129_10438820 3300009147 Bacteria 1714
49 Ga0105243_10000721 3300009148 Bacteria 31750
50 Ga0105248_10000422 3300009177 Bacteria 48443
51 Ga0105237_10014528 3300009545 Bacteria 8229
52 Ga0105237_10014751 3300009545 Bacteria 8156
53 Ga0105249_10000001 3300009553 Bacteria 504948
54 Ga0105239_10003379 3300010375 Bacteria 19579
55 Ga0105239_10117325 3300010375 Bacteria 2954
56 Ga0163162_10089755 3300013306 Bacteria 3155
57 Ga0163163_10015040 3300014325 Bacteria 7136
58 Ga0206354_11571320 3300020081 Bacteria 1854
59 Ga0206353_11841349 3300020082 Bacteria 10952
60 Ga0213876_10015361 3300021384 Bacteria 4052
61 Ga0209051_1000652 3300025303 Bacteria 39235
62 Ga0209051_1002883 3300025303 Bacteria 11815
63 Ga0207710_10000013 3300025900 Bacteria 409402
64 Ga0207705_10007513 3300025909 Bacteria 8009
65 Ga0207707_10010578 3300025912 Bacteria 8011
66 Ga0207671_10024474 3300025914 Bacteria 4540
67 Ga0207660_10013558 3300025917 Bacteria 5343
68 Ga0207652_10003757 3300025921 Bacteria 12440
69 Ga0207681_10008280 3300025923 Bacteria 6358
70 Ga0207650_10083235 3300025925 Bacteria 2430
71 Ga0207664_10051051 3300025929 Bacteria 3264
72 Ga0207664_10066851 3300025929 Bacteria 2883
73 Ga0207706_10130287 3300025933 Bacteria 2212
74 Ga0207709_10006011 3300025935 Bacteria 6839
75 Ga0207665_10063071 3300025939 Bacteria 2516
76 Ga0207711_10001866 3300025941 Bacteria 19205
77 Ga0207712_10000006 3300025961 Bacteria 573204
78 Ga0207668_10002031 3300025972 Bacteria 11810
79 Ga0207658_10000367 3300025986 Bacteria 44364
80 Ga0207658_10008850 3300025986 Bacteria 6832
81 Ga0207703_10062865 3300026035 Bacteria 3041
82 Ga0207648_10096143 3300026089 Bacteria 2592
83 Ga0207675_100217264 3300026118 Bacteria 1841
84 Ga0207675_100384401 3300026118 Bacteria 1381
85 Ga0207683_10247214 3300026121 Bacteria 1627
86 Ga0207428_10061511 3300027907 Bacteria 2972
87 Ga0268266_10009077 3300028379 Bacteria 8780
88 Ga0268265_10000016 3300028380 Bacteria 299380
89 Ga0268265_10013966 3300028380 Bacteria 5469
90 Ga0268265_10113516 3300028380 Bacteria 2217
91 Ga0268265_10159276 3300028380 Bacteria 1915
92 Ga0268264_10000026 3300028381 Bacteria 459088
93 Ga0265330_10016796 3300031235 Bacteria 3374
94 Ga0265332_10000038 3300031238 Bacteria 133265
95 Ga0265328_10004444 3300031239 Bacteria 6091
96 Ga0265320_10063188 3300031240 Bacteria 1761
97 Ga0265325_10006394 3300031241 Bacteria 7146
98 Ga0265329_10007348 3300031242 Bacteria 4273
99 Ga0265340_10050722 3300031247 Bacteria 2011
100 Ga0265339_10000556 3300031249 Bacteria 29178
101 Ga0265331_10000126 3300031250 Bacteria 101034
102 Ga0265327_10000185 3300031251 Bacteria 131884
103 Ga0265327_10000660 3300031251 Bacteria 55433
104 Ga0265327_10002515 3300031251 Bacteria 19138
105 Ga0265327_10005553 3300031251 Bacteria 10471
106 Ga0265327_10031692 3300031251 Bacteria 2967
107 Ga0265327_10089887 3300031251 Bacteria 1499
108 Ga0265316_10000031 3300031344 Bacteria 161451
109 Ga0265314_10000201 3300031711 Bacteria 88062
110 Ga0265314_10001359 3300031711 Bacteria 27628
111 Ga0265342_10002791 3300031712 Bacteria 14775
112 Ga0265342_10069705 3300031712 Bacteria 2053
113 Ga0307518_10000526 3300031838 Bacteria 29189
114 Ga0307410_10133891 3300031852 Bacteria 1824
115 Ga0307412_10032277 3300031911 Bacteria 3316
116 Ga0307409_100099503 3300031995 Bacteria 2408
117 Ga0307416_100061093 3300032002 Bacteria 3073
118 Ga0307411_10056049 3300032005 Bacteria 2596
119 Ga0307415_100011342 3300032126 Bacteria 5095
120 Ga0373934_0012029 3300035086 Bacteria 3265
121 Ga0373949_0000021 3300035090 Bacteria 56117
122 Ga0373941_0018047 3300035115 Bacteria 1943
123 Ga0373943_0033789 3300035170 Bacteria 2438
124 Ga0373935_0057378 3300035692 Bacteria 2484
125 Ga0373935_0065103 3300035692 Bacteria 2338
126 Ga0373927_0027612 3300035695 Bacteria 3705
127 Ga0373947_0011914 3300035725 Bacteria 4980
128 Ga0373947_0016719 3300035725 Bacteria 4215
129 Ga0373937_0042927 3300036401 Bacteria 4127
130 Ga0373937_0166748 3300036401 Bacteria 2066
131 Ga0373925_0008849 3300037068 Bacteria 7333
132 Ga0436365_0067155 3300039437 Bacteria 2362
133 Ga0436365_0344258 3300039437 Bacteria 4872
134 Ga0436365_0398569 3300039437 Bacteria 109705
135 Ga0436360_0453990 3300039438 Bacteria 13417
136 Ga0436361_0297263 3300039447 Bacteria 4134
137 Ga0436362_0525952 3300039453 Bacteria 1417
138 Ga0439461_0000579 3300041410 Bacteria 5307
139 Ga0439465_0018281 3300041413 Bacteria 2190
140 Ga0439431_0014553 3300041997 Bacteria 1824
141 Ga0439445_0000251 3300042004 Bacteria 10201
142 Ga0439434_0002374 3300042435 Bacteria 5466
143 Ga0466972_0006241 3300044658 Bacteria 5986
144 Ga0466972_0007860 3300044658 Bacteria 5347
145 Ga0466963_0082347 3300044694 Bacteria 2181
146 Ga0466963_0084270 3300044694 Bacteria 2156
147 Ga0466971_0040207 3300044719 Bacteria 2100
148 Ga0466957_0004194 3300044842 Bacteria 7989
149 Ga0466957_0020680 3300044842 Bacteria 3873
150 Ga0466957_0039518 3300044842 Bacteria 2847
151 Ga0466957_0076130 3300044842 Bacteria 2083
152 Ga0466960_0000395 3300044901 Bacteria 14896
153 Ga0466959_0085196 3300045049 Bacteria 2274
154 Ga0466958_0010077 3300045836 Bacteria 5282
155 Ga0466958_0058318 3300045836 Bacteria 2347
156 Ga0466958_0063304 3300045836 Bacteria 2256
157 Ga0466967_0002190 3300045976 Bacteria 12019
158 Ga0466967_0003022 3300045976 Bacteria 10790
159 Ga0466967_0009096 3300045976 Bacteria 7346
160 Ga0466967_0119358 3300045976 Bacteria 2434
161 Ga0466967_0134790 3300045976 Bacteria 2296
162 Ga0466967_0153322 3300045976 Bacteria 2156
163 Ga0495629_0040803 3300046459 Bacteria 3265
164 Ga0495638_0002622 3300046460 Bacteria 14476
165 Ga0495638_0004741 3300046460 Bacteria 10258
166 Ga0495580_0000054 3300046472 Bacteria 65096
167 Ga0495582_0072021 3300046473 Bacteria 1912
168 Ga0495639_0076186 3300046475 Bacteria 1556
169 Ga0495606_0034014 3300046507 Bacteria 3505
170 Ga0495630_0146228 3300046517 Bacteria 1798
171 Ga0495648_0000977 3300046524 Bacteria 29486
172 Ga0495667_0079817 3300046559 Bacteria 2127
173 Ga0495668_0041214 3300046616 Bacteria 2573
174 Ga0495634_0021429 3300046642 Bacteria 4568
175 Ga0495611_0017884 3300046648 Bacteria 3037
176 Ga0495613_0001239 3300046689 Bacteria 19519
177 Ga0495649_0127757 3300046694 Bacteria 1342
178 Ga0495581_0038348 3300047315 Bacteria 2773
179 Ga0495672_0001236 3300047320 Bacteria 25663
180 Ga0495673_0002507 3300047469 Bacteria 12853
181 Ga0496100_0045345 3300048903 Bacteria 2821
182 Ga0496101_0005166 3300048904 Bacteria 8304
183 Ga0496101_0013832 3300048904 Bacteria 5417
184 Ga0496102_0000750 3300048905 Bacteria 31716
185 Ga0496103_0000316 3300048906 Bacteria 44550
186 Ga0496104_0000418 3300048907 Bacteria 37221
187 Ga0496105_0029487 3300048908 Bacteria 4491
188 Ga0496106_0014139 3300048909 Bacteria 5896
189 Ga0496106_0183360 3300048909 Bacteria 1662
190 Ga0496107_0022615 3300048910 Bacteria 4443
191 Ga0496107_0037317 3300048910 Bacteria 3487
192 Ga0496109_0089103 3300048912 Bacteria 2852
193 Ga0496110_0167142 3300048913 Bacteria 1995
194 Ga0496114_0002485 3300048917 Bacteria 14085
195 Ga0496114_0141130 3300048917 Bacteria 2086
196 Ga0496115_0057580 3300048918 Bacteria 3126
197 Ga0496116_0122600 3300048919 Bacteria 1500
198 Ga0496117_0002627 3300048920 Bacteria 22298
199 Ga0496118_0012024 3300048921 Bacteria 8359
200 Ga0496119_0015898 3300048922 Bacteria 5761
201 Ga0496119_0024300 3300048922 Bacteria 4267
202 Ga0496119_0044354 3300048922 Bacteria 2801
203 Ga0496120_0009602 3300048923 Bacteria 6841
204 Ga0496121_0007638 3300048924 Bacteria 12989
205 Ga0496125_0010315 3300048928 Bacteria 9458
206 Ga0496125_0079618 3300048928 Bacteria 2513
207 Ga0496126_0003010 3300048929 Bacteria 21871
208 Ga0496126_0015746 3300048929 Bacteria 7598
209 Ga0496126_0194217 3300048929 Bacteria 1717
210 Ga0501032_0013764 3300049569 Bacteria 5740
211 Ga0501033_0002350 3300049570 Bacteria 16130
212 Ga0501034_0000339 3300049571 Bacteria 81769
213 Ga0501034_0055735 3300049571 Bacteria 3977
214 Ga0501034_0117838 3300049571 Bacteria 2643
215 Ga0501034_0198910 3300049571 Bacteria 1963
216 Ga0501036_0054787 3300049572 Bacteria 3379
217 Ga0501037_0083141 3300049573 Bacteria 2319
218 Ga0501037_0083685 3300049573 Bacteria 2311
219 Ga0501038_0111336 3300049574 Bacteria 2268
220 Ga0501046_0039066 3300049580 Bacteria 3803
221 Ga0501067_0029205 3300049583 Bacteria 3056
222 Ga0501068_0004152 3300049584 Bacteria 7849
223 Ga0501069_0000089 3300049585 Bacteria 43912
224 Ga0501069_0003433 3300049585 Bacteria 8142
225 Ga0501070_0000008 3300049586 Bacteria 199963
226 Ga0501070_0002338 3300049586 Bacteria 16653
227 Ga0501070_0002508 3300049586 Bacteria 16082
228 Ga0501070_0012140 3300049586 Bacteria 7269
229 Ga0501070_0043724 3300049586 Bacteria 3728
230 Ga0501071_0119523 3300049587 Bacteria 1953
231 Ga0501072_0014473 3300049588 Bacteria 6045
232 Ga0501073_0121847 3300049589 Bacteria 1807
233 Ga0501074_0015365 3300049590 Bacteria 5565
234 Ga0501079_0001072 3300049741 Bacteria 19032
235 Ga0501080_0021186 3300049742 Bacteria 6016
236 Ga0501080_0047875 3300049742 Bacteria 3980
237 Ga0501080_0290249 3300049742 Bacteria 1485
238 Ga0501083_0003640 3300049744 Bacteria 10817
239 Ga0501083_0153535 3300049744 Bacteria 1507
240 Ga0501035_0008115 3300049822 Bacteria 9784
241 Ga0501044_0001557 3300049823 Bacteria 26865
242 Ga0501044_0002686 3300049823 Bacteria 20228
243 nmdc:mga03n38_12563_c1 3300050490 Bacteria 3191
244 nmdc:mga00v17_7734_c2 3300050491 Bacteria 4178
245 nmdc:mga00v17_89009_c1 3300050491 Bacteria 1937
246 nmdc:mga0yw44_126711_c1 3300050492 Bacteria 1649
247 nmdc:mga0yw44_140740_c1 3300050492 Bacteria 1568
248 nmdc:mga0yw44_19631_c1 3300050492 Bacteria 3731
249 nmdc:mga0yw44_23527_c1 3300050492 Bacteria 3472
250 nmdc:mga0yw44_48532_c1 3300050492 Bacteria 2560
251 nmdc:mga07m45_33183_c1 3300050496 Bacteria 2866
252 nmdc:mga09592_39949_c1 3300050508 Bacteria 3941
253 nmdc:mga0qj67_173045_c1 3300050509 Bacteria 1753
254 nmdc:mga06r32_83783_c1 3300050510 Bacteria 3107
255 nmdc:mga08y16_31222_c1 3300050511 Bacteria 5605
256 nmdc:mga08y16_43154_c1 3300050511 Bacteria 4725
257 nmdc:mga0a205_210569_c1 3300050515 Bacteria 1352
258 Ga0500610_0003925 3300053079 Bacteria 5807
259 Ga0500556_0000848 3300053104 Bacteria 17426
260 Ga0500556_0016181 3300053104 Bacteria 2316
261 Ga0500642_0008941 3300053130 Bacteria 3453
262 Ga0500652_000633 3300053131 Bacteria 12031
263 Ga0500568_0000094 3300053139 Bacteria 83123
264 Ga0500604_0019976 3300053151 Bacteria 1881
265 Ga0500616_0012094 3300053153 Bacteria 5064
266 Ga0500616_0015963 3300053153 Bacteria 4285
267 Ga0500616_0062223 3300053153 Bacteria 1929
268 Ga0500627_0002581 3300053158 Bacteria 5410
269 Ga0500645_000128 3300053730 Bacteria 59444
270 Ga0501084_0000735 3300054114 Bacteria 25000
271 Ga0501084_0226429 3300054114 Bacteria 1578
272 Ga0501082_0046339 3300060353 Bacteria 3748
273 2548698858 2547132424 Bacteria 8348532
274 2586063912 2585427649 Bacteria 9053857
275 2643893388 2643221576 Bacteria 5214352
276 2643962438 2643221590 Bacteria 5214697
277 2644513850 2643221692 Bacteria 7282860
278 2644515202 2643221692 Bacteria 7282860
279 2676199900 2675902999 Bacteria 9438463
280 2739205905 2738543005 Bacteria 5278128
281 2744956602 2744054611 Bacteria 5611514
282 2774844478 2773857921 Bacteria 9435764
283 2795792943 2795385472 Bacteria 6627535
284 2842137795 2842134933 Bacteria 5847019
285 2842889450 2842888712 Bacteria 4279094
286 2870789922 2870782633 Bacteria 9624083
287 2902795794 2902792274 Bacteria 7270173
288 2902798545 2902792274 Bacteria 7270173
289 2902843626 2902837492 Bacteria 6697721
290 2915775570 2915768154 Bacteria 8424322
291 2919716817 2919713450 Bacteria 7431245
292 3003009185 3002998708 Bacteria 11715108
293 8053953240 8053945823 Bacteria 8962862
294 Ga0436365_0739482
295 Ga0070658_10004424
296 Ga0070680_100012774
297 Ga0070660_100190777
298 Ga0070689_100078013
299 Ga0070668_100003456
300 Ga0070668_100069041
301 Ga0070669_100001042
302 Ga0070667_100000562
303 Ga0070667_100018136
304 Ga0070714_100051478
305 Ga0070713_100077977
306 Ga0070708_100014384
307 Ga0070681_10115035
308 Ga0070698_100060586
309 Ga0070679_100025036
310 Ga0070696_100047585
311 Ga0070665_100007010
312 Ga0068859_100000984
313 Ga0068863_100002213
314 Ga0068858_100001354
315 Ga0068860_100000112
316 Ga0068862_100004926
317 Ga0068862_100024121
318 Ga0081455_10048302
319 Ga0081538_10052563
320 Ga0075365_10049644
321 Ga0075365_10123559
322 Ga0075363_100002167
323 Ga0075363_100015661
324 Ga0075364_10012098
325 Ga0075364_10049049
326 Ga0075364_10118037
327 Ga0070715_10031316
328 Ga0070716_100082188
329 Ga0075369_10008341
330 Ga0075370_10028490
331 Ga0075428_100000002
332 Ga0075428_100029667
333 Ga0075428_100042805
334 Ga0075431_100094078
335 Ga0075434_100249698
336 Ga0097620_100000984
337 Ga0111539_10017024
338 Ga0111539_10020082
339 Ga0111539_10037739
340 Ga0105247_10000007
341 Ga0114129_10438820
342 Ga0105243_10000721
343 Ga0105248_10000422
344 Ga0105237_10014528
345 Ga0105237_10014751
346 Ga0105249_10000001
347 Ga0105239_10003379
348 Ga0105239_10117325
349 Ga0163162_10089755
350 Ga0163163_10015040
351 Ga0206354_11571320
352 Ga0206353_11841349
353 Ga0213876_10015361
354 Ga0209051_1000652
355 Ga0209051_1002883
356 Ga0207710_10000013
357 Ga0207705_10007513
358 Ga0207707_10010578
359 Ga0207671_10024474
360 Ga0207660_10013558
361 Ga0207652_10003757
362 Ga0207681_10008280
363 Ga0207650_10083235
364 Ga0207664_10051051
365 Ga0207664_10066851
366 Ga0207706_10130287
367 Ga0207709_10006011
368 Ga0207665_10063071
369 Ga0207711_10001866
370 Ga0207712_10000006
371 Ga0207668_10002031
372 Ga0207658_10000367
373 Ga0207658_10008850
374 Ga0207703_10062865
375 Ga0207648_10096143
376 Ga0207675_100217264
377 Ga0207675_100384401
378 Ga0207683_10247214
379 Ga0207428_10061511
380 Ga0268266_10009077
381 Ga0268265_10000016
382 Ga0268265_10013966
383 Ga0268265_10113516
384 Ga0268265_10159276
385 Ga0268264_10000026
386 Ga0265330_10016796
387 Ga0265332_10000038
388 Ga0265328_10004444
389 Ga0265320_10063188
390 Ga0265325_10006394
391 Ga0265329_10007348
392 Ga0265340_10050722
393 Ga0265339_10000556
394 Ga0265331_10000126
395 Ga0265327_10000185
396 Ga0265327_10000660
397 Ga0265327_10002515
398 Ga0265327_10005553
399 Ga0265327_10031692
400 Ga0265327_10089887
401 Ga0265316_10000031
402 Ga0265314_10000201
403 Ga0265314_10001359
404 Ga0265342_10002791
405 Ga0265342_10069705
406 Ga0307518_10000526
407 Ga0307410_10133891
408 Ga0307412_10032277
409 Ga0307409_100099503
410 Ga0307416_100061093
411 Ga0307411_10056049
412 Ga0307415_100011342
413 Ga0373934_0012029
414 Ga0373949_0000021
415 Ga0373941_0018047
416 Ga0373943_0033789
417 Ga0373935_0057378
418 Ga0373935_0065103
419 Ga0373927_0027612
420 Ga0373947_0011914
421 Ga0373947_0016719
422 Ga0373937_0042927
423 Ga0373937_0166748
424 Ga0373925_0008849
425 Ga0436365_0067155
426 Ga0436365_0344258
427 Ga0436365_0398569
428 Ga0436360_0453990
429 Ga0436361_0297263
430 Ga0436362_0525952
431 Ga0439461_0000579
432 Ga0439465_0018281
433 Ga0439431_0014553
434 Ga0439445_0000251
435 Ga0439434_0002374
436 Ga0466972_0006241
437 Ga0466972_0007860
438 Ga0466963_0082347
439 Ga0466963_0084270
440 Ga0466971_0040207
441 Ga0466957_0004194
442 Ga0466957_0020680
443 Ga0466957_0039518
444 Ga0466957_0076130
445 Ga0466960_0000395
446 Ga0466959_0085196
447 Ga0466958_0010077
448 Ga0466958_0058318
449 Ga0466958_0063304
450 Ga0466967_0002190
451 Ga0466967_0003022
452 Ga0466967_0009096
453 Ga0466967_0119358
454 Ga0466967_0134790
455 Ga0466967_0153322
456 Ga0495629_0040803
457 Ga0495638_0002622
458 Ga0495638_0004741
459 Ga0495580_0000054
460 Ga0495582_0072021
461 Ga0495639_0076186
462 Ga0495606_0034014
463 Ga0495630_0146228
464 Ga0495648_0000977
465 Ga0495667_0079817
466 Ga0495668_0041214
467 Ga0495634_0021429
468 Ga0495611_0017884
469 Ga0495613_0001239
470 Ga0495649_0127757
471 Ga0495581_0038348
472 Ga0495672_0001236
473 Ga0495673_0002507
474 Ga0496100_0045345
475 Ga0496101_0005166
476 Ga0496101_0013832
477 Ga0496102_0000750
478 Ga0496103_0000316
479 Ga0496104_0000418
480 Ga0496105_0029487
481 Ga0496106_0014139
482 Ga0496106_0183360
483 Ga0496107_0022615
484 Ga0496107_0037317
485 Ga0496109_0089103
486 Ga0496110_0167142
487 Ga0496114_0002485
488 Ga0496114_0141130
489 Ga0496115_0057580
490 Ga0496116_0122600
491 Ga0496117_0002627
492 Ga0496118_0012024
493 Ga0496119_0015898
494 Ga0496119_0024300
495 Ga0496119_0044354
496 Ga0496120_0009602
497 Ga0496121_0007638
498 Ga0496125_0010315
499 Ga0496125_0079618
500 Ga0496126_0003010
501 Ga0496126_0015746
502 Ga0496126_0194217
503 Ga0501032_0013764
504 Ga0501033_0002350
505 Ga0501034_0000339
506 Ga0501034_0055735
507 Ga0501034_0117838
508 Ga0501034_0198910
509 Ga0501036_0054787
510 Ga0501037_0083141
511 Ga0501037_0083685
512 Ga0501038_0111336
513 Ga0501046_0039066
514 Ga0501067_0029205
515 Ga0501068_0004152
516 Ga0501069_0000089
517 Ga0501069_0003433
518 Ga0501070_0000008
519 Ga0501070_0002338
520 Ga0501070_0002508
521 Ga0501070_0012140
522 Ga0501070_0043724
523 Ga0501071_0119523
524 Ga0501072_0014473
525 Ga0501073_0121847
526 Ga0501074_0015365
527 Ga0501079_0001072
528 Ga0501080_0021186
529 Ga0501080_0047875
530 Ga0501080_0290249
531 Ga0501083_0003640
532 Ga0501083_0153535
533 Ga0501035_0008115
534 Ga0501044_0001557
535 Ga0501044_0002686
536 nmdc:mga03n38_12563_c1
537 nmdc:mga00v17_7734_c2
538 nmdc:mga00v17_89009_c1
539 nmdc:mga0yw44_126711_c1
540 nmdc:mga0yw44_140740_c1
541 nmdc:mga0yw44_19631_c1
542 nmdc:mga0yw44_23527_c1
543 nmdc:mga0yw44_48532_c1
544 nmdc:mga07m45_33183_c1
545 nmdc:mga09592_39949_c1
546 nmdc:mga0qj67_173045_c1
547 nmdc:mga06r32_83783_c1
548 nmdc:mga08y16_31222_c1
549 nmdc:mga08y16_43154_c1
550 nmdc:mga0a205_210569_c1
551 Ga0500610_0003925
552 Ga0500556_0000848
553 Ga0500556_0016181
554 Ga0500642_0008941
555 Ga0500652_000633
556 Ga0500568_0000094
557 Ga0500604_0019976
558 Ga0500616_0012094
559 Ga0500616_0015963
560 Ga0500616_0062223
561 Ga0500627_0002581
562 Ga0500645_000128
563 Ga0501084_0000735
564 Ga0501084_0226429
565 Ga0501082_0046339
566 2548698858
567 2586063912
568 2643893388
569 2643962438
570 2644513850
571 2644515202
572 2676199900
573 2739205905
574 2744956602
575 2774844478
576 2795792943
577 2842137795
578 2842889450
579 2870789922
580 2902795794
581 2902798545
582 2902843626
583 2915775570
584 2919716817
585 3003009185
586 8053953240

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

320

470

0.98

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

335

459

0.92

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

206

304

0.91

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

64

114

0.91

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

108

202

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ivh-assembly1.cif.gz_B structure of human isovaleryl-coa dehydrogenase at 2.6 angstroms resolution: structural basis for substrate specificity 0.9208 4 383
3d6b-assembly1.cif.gz_C 2.2 a crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei 0.918 4 383
3eom-assembly1.cif.gz_B 2.4 a crystal structure of native glutaryl-coa dehydrogenase from burkholderia pseudomallei 0.9178 4 383
3eon-assembly1.cif.gz_B 2.55a crystal structure of native glutaryl-coa dehydrogenase from burkholderia pseudomallei in complex with a small molecule 0.9172 4 383
3d6b-assembly1.cif.gz_D 2.2 a crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei 0.9166 4 383
ID Description Score Start End Superfamily
af_I6XFA9_259_402_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9663 238 379 1.20.140.10
af_I6XFA9_143_248_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9609 122 223 2.40.110.10
af_I6XFA9_259_402_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9466 238 379 1.20.140.10
af_Q9VSL9_273_416_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9414 238 380 1.20.140.10
af_Q8AW60_270_413_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9411 237 379 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A7G1IGN2-F1-model_v4 Acyl-CoA dehydrogenase/oxidase C-terminal domain-containing protein 0.9618 252 381 GO:0003995
AF-A0A317NQ90-F1-model_v4 Acyl-CoA dehydrogenase 0.96 1 383 GO:0003995
GO:0050660
AF-A0A317NQ90-F1-model_v4 Acyl-CoA dehydrogenase 0.9575 1 383 GO:0003995
GO:0050660
AF-A0A1U1QMT4-F1-model_v4 deleted 0.9551 263 381
AF-A0A833LRV9-F1-model_v4 glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) 0.9487 79 383 GO:0000062
GO:0004361
GO:0033539
GO:0046949
GO:0050660

Map