F390895

General Info

Members Datasets Scaffolds Average Seq Length
292 219 259 436

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10313640|Ga0114129_103136402
Length 423
Sequence LRFGGEFIWIDARQRLDILSHLIPFSSATEPRGERARVAPGDIAVGVVIGRASEYFDFFVYGIASVLVFPAVFFPFADRLHGTLYAFVLFAFAFIVRPLGTLAGMALQRHFGRGTKLTVALFLLGSSTGGSWDGLPSLLALNAPEKRRGWYAMLGQLGAPLGFIVACGLFLYLWANLSSADFLGWGWRFPFFAAFAINVVALFARLRLVVTREYERELQAHELQPCDVRDLLAAQGHNVFIGAFAALASYALFHLVTVFPLSWVALYSQQEIGQFLSVELAGAALAAAAMPLSGLVADRIGRRRTLGWVAVAIALFSVVAPWLLGGGDLAQDAFILVGFVLLGLSYGQAAGSVTSNFLPRFRYTGAALTADLAWLIGAAFAPLVALGLSARFGLVAVSLYLLSGAACTLLALRANRALSAVRD

Samples

Sample ID Description Type Environment
1 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
2 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
3 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
4 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
5 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
6 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
7 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
8 2643221638 Duganella sp. Root336D2 Isolate Unclassified
9 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
10 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
11 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
12 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
13 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
14 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
15 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
16 2842711865 Duganella sp. R-73148 Isolate Unclassified
17 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
18 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
19 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
20 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
21 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
22 2885266251 Ralstonia sp. SET104 Isolate Nodule
23 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
24 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
25 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
26 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
27 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
28 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
29 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
30 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
31 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
32 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
33 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
34 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
35 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
36 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
37 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
38 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
39 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
40 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
41 3300003565 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_16_lowP_mix3_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
42 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
43 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
44 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
45 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
46 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
47 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
48 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
49 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
50 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
51 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
52 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
53 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
54 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
55 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
56 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
57 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
58 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
59 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
60 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
61 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
62 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
63 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
64 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
65 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
66 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
67 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
68 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
69 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
70 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
71 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
72 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
73 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
74 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
75 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
76 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
77 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
78 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
79 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
90 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
91 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
92 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
93 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
94 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
95 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
96 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
98 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
99 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
106 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
108 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
110 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
111 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
116 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
117 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
140 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
142 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
143 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
144 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
147 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
148 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
149 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
150 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
151 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
152 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
153 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
154 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
155 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
156 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
157 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
158 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
159 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
160 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
161 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
162 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
163 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
164 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
165 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
166 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
167 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
168 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
169 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
170 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
171 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
172 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
173 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
174 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
175 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
176 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
177 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
178 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
179 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
180 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
181 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
182 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
183 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
184 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
185 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
186 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
187 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
188 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
189 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
190 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
191 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
192 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
193 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
194 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
195 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
196 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
197 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
198 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
199 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
200 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
201 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
202 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
203 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
204 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
205 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
206 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
207 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
208 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
209 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
210 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
211 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
212 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
213 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
214 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
215 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
216 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
217 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
218 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
219 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.9
Metatranscriptomes 4.79
Isolates 11.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.92
Nodule 2.74
Rhizoplane 2.05
Rhizosphere 61.3
Stem 0
Stem Tuber 0
Unclassified 11.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000951 3300001979 Bacteria 12867
2 JGI24740J21852_10015315 3300001979 Bacteria 2804
3 JGI24739J22299_10000198 3300001989 Bacteria 19994
4 JGI25156J39149_1002066 3300002705 Bacteria 7626
5 JGI25154J39366_1000692 3300002738 Bacteria 15435
6 JGI25152J39213_1003786 3300002773 Bacteria 5025
7 JGI25150J39212_1003148 3300002774 Bacteria 3928
8 JGI25159J45721_1008180 3300002987 Bacteria 2902
9 JGI25161J50226_1004514 3300003374 Bacteria 2902
10 Ga0006560J51390_1030559 3300003565 Bacteria 1750
11 Ga0006562J51391_1019570 3300003578 Bacteria 3140
12 Ga0055538_1000002 3300003751 Bacteria 999437
13 Ga0055539_1000002 3300003752 Bacteria 999437
14 Ga0055539_1000062 3300003752 Bacteria 141171
15 Ga0055533_1000004 3300003756 Bacteria 999437
16 Ga0055533_1001544 3300003756 Bacteria 5999
17 Ga0055532_1000019 3300003758 Bacteria 286358
18 Ga0055525_1000002 3300003759 Bacteria 999437
19 Ga0055525_1000275 3300003759 Bacteria 47849
20 Ga0055535_1000014 3300003761 Bacteria 286358
21 Ga0055542_1000588 3300003762 Bacteria 31406
22 Ga0055529_1000086 3300003763 Bacteria 140681
23 Ga0055526_1006643 3300003771 Bacteria 6214
24 Ga0055524_1000010 3300003775 Bacteria 282893
25 Ga0055524_1005956 3300003775 Bacteria 5365
26 Ga0055534_1002008 3300003784 Bacteria 7403
27 Ga0055531_10016339 3300003794 Bacteria 3207
28 Ga0055541_1000002 3300003841 Bacteria 896405
29 Ga0055541_1000254 3300003841 Bacteria 19058
30 Ga0055543_1006165 3300004625 Bacteria 2940
31 Ga0065165_1017972 3300005262 Bacteria 2581
32 Ga0070666_10000012 3300005335 Bacteria 244720
33 Ga0070660_100110728 3300005339 Bacteria 2184
34 Ga0070661_100000054 3300005344 Bacteria 88505
35 Ga0070661_100002836 3300005344 Bacteria 11910
36 Ga0070668_100048689 3300005347 Bacteria 3260
37 Ga0070659_100000935 3300005366 Bacteria 21449
38 Ga0070659_100003721 3300005366 Bacteria 10877
39 Ga0070663_100000010 3300005455 Bacteria 158193
40 Ga0070663_100013650 3300005455 Bacteria 5188
41 Ga0070662_100041791 3300005457 Bacteria 3273
42 Ga0070685_10043015 3300005466 Bacteria 2581
43 Ga0070665_100005612 3300005548 Bacteria 12904
44 Ga0068855_100001647 3300005563 Bacteria 27987
45 Ga0070664_100000005 3300005564 Bacteria 222746
46 Ga0070664_100016726 3300005564 Bacteria 6016
47 Ga0068857_100004064 3300005577 Bacteria 12317
48 Ga0068857_100015353 3300005577 Bacteria 6688
49 Ga0068854_100000032 3300005578 Bacteria 106054
50 Ga0068856_100000054 3300005614 Bacteria 104246
51 Ga0068852_100063187 3300005616 Bacteria 3223
52 Ga0068858_100052528 3300005842 Bacteria 3771
53 Ga0070717_10083330 3300006028 Bacteria 2689
54 Ga0075364_10001424 3300006051 Bacteria 12961
55 Ga0079104_1004079 3300006946 Bacteria 6424
56 Ga0099826_10000002 3300006948 Bacteria 1125830
57 Ga0105240_10037048 3300009093 Bacteria 6270
58 Ga0114129_10313640 3300009147 Bacteria 2087
59 Ga0105237_10000023 3300009545 Bacteria 226144
60 Ga0105237_10018943 3300009545 Bacteria 7114
61 Ga0105238_10000109 3300009551 Bacteria 90227
62 Ga0105238_10001243 3300009551 Bacteria 25672
63 Ga0105239_10020689 3300010375 Bacteria 7260
64 Ga0105239_10034292 3300010375 Bacteria 5573
65 Ga0105239_10073223 3300010375 Bacteria 3766
66 Ga0157314_1000101 3300012500 Bacteria 9089
67 Ga0157373_10008867 3300013100 Bacteria 7445
68 Ga0157371_10000103 3300013102 Bacteria 128611
69 Ga0157370_10001099 3300013104 Bacteria 33935
70 Ga0163162_10000324 3300013306 Bacteria 43904
71 Ga0157372_10000151 3300013307 Bacteria 75926
72 Ga0182006_1000747 3300015261 Bacteria 22238
73 Ga0182006_1008048 3300015261 Bacteria 4789
74 Ga0182006_1039640 3300015261 Bacteria 1858
75 Ga0163161_10029026 3300017792 Bacteria 3931
76 Ga0197907_10334798 3300020069 Bacteria 2245
77 Ga0206356_10282866 3300020070 Bacteria 2328
78 Ga0206349_1270541 3300020075 Bacteria 4430
79 Ga0206355_1081799 3300020076 Bacteria 2527
80 Ga0206351_10614052 3300020077 Bacteria 7874
81 Ga0154015_1423277 3300020610 Bacteria 27201
82 Ga0213872_10000039 3300021361 Bacteria 123507
83 Ga0213872_10008707 3300021361 Bacteria 4901
84 Ga0213872_10013064 3300021361 Bacteria 3892
85 Ga0213872_10019123 3300021361 Bacteria 3155
86 Ga0224712_10049439 3300022467 Bacteria 1629
87 Ga0224712_10059760 3300022467 Bacteria 1515
88 Ga0209436_102316 3300025208 Bacteria 5828
89 Ga0209436_103052 3300025208 Bacteria 4624
90 Ga0209784_100002 3300025224 Bacteria 1753105
91 Ga0209784_100003 3300025224 Bacteria 1379451
92 Ga0209566_100002 3300025225 Bacteria 2614868
93 Ga0209566_100003 3300025225 Bacteria 1753105
94 Ga0209674_100004 3300025226 Bacteria 1753105
95 Ga0209674_100008 3300025226 Bacteria 1076909
96 Ga0209147_100002 3300025229 Bacteria 2158988
97 Ga0209563_100004 3300025230 Bacteria 1814108
98 Ga0209563_100006 3300025230 Bacteria 1753105
99 Ga0209563_109217 3300025230 Bacteria 1507
100 Ga0209437_105832 3300025233 Bacteria 2081
101 Ga0209258_100002 3300025242 Bacteria 2158988
102 Ga0207425_1000001 3300025245 Bacteria 2525432
103 Ga0207425_1000249 3300025245 Bacteria 41006
104 Ga0209677_100003 3300025253 Bacteria 1753105
105 Ga0209677_100009 3300025253 Bacteria 749530
106 Ga0209759_1011670 3300025256 Bacteria 2480
107 Ga0209759_1017630 3300025256 Bacteria 1753
108 Ga0209129_1000001 3300025258 Bacteria 1452436
109 Ga0209129_1005202 3300025258 Bacteria 4720
110 Ga0209565_1000571 3300025263 Bacteria 25126
111 Ga0209455_1000073 3300025272 Bacteria 291417
112 Ga0209455_1000076 3300025272 Bacteria 284092
113 Ga0209130_1002642 3300025284 Bacteria 8604
114 Ga0209675_1001467 3300025291 Bacteria 13553
115 Ga0209564_1000434 3300025295 Bacteria 72534
116 Ga0209758_1000116 3300025297 Bacteria 198356
117 Ga0209758_1002679 3300025297 Bacteria 17573
118 Ga0209050_1006522 3300025298 Bacteria 6878
119 Ga0209256_1000007 3300025299 Bacteria 1136599
120 Ga0209256_1001951 3300025299 Bacteria 18696
121 Ga0209256_1007308 3300025299 Bacteria 5498
122 Ga0209257_1000293 3300025304 Bacteria 110422
123 Ga0207680_10000013 3300025903 Bacteria 244716
124 Ga0207647_10002969 3300025904 Bacteria 12759
125 Ga0207699_10128797 3300025906 Bacteria 1648
126 Ga0207705_10004077 3300025909 Bacteria 11089
127 Ga0207695_10002741 3300025913 Bacteria 25691
128 Ga0207695_10005250 3300025913 Bacteria 17292
129 Ga0207671_10000020 3300025914 Bacteria 309636
130 Ga0207671_10000033 3300025914 Bacteria 245869
131 Ga0207671_10012706 3300025914 Bacteria 6753
132 Ga0207657_10054528 3300025919 Bacteria 3457
133 Ga0207649_10004567 3300025920 Bacteria 7510
134 Ga0207649_10007885 3300025920 Bacteria 5794
135 Ga0207694_10000122 3300025924 Bacteria 82443
136 Ga0207694_10002664 3300025924 Bacteria 14468
137 Ga0207690_10001019 3300025932 Bacteria 17938
138 Ga0207690_10022760 3300025932 Bacteria 3902
139 Ga0207706_10095901 3300025933 Bacteria 2608
140 Ga0207679_10000020 3300025945 Bacteria 225727
141 Ga0207679_10000181 3300025945 Bacteria 51923
142 Ga0207667_10000032 3300025949 Bacteria 322253
143 Ga0207667_10009332 3300025949 Bacteria 11568
144 Ga0207667_10056055 3300025949 Bacteria 4141
145 Ga0207668_10037521 3300025972 Bacteria 3244
146 Ga0207640_10000017 3300025981 Bacteria 208145
147 Ga0207678_10000008 3300026067 Bacteria 168926
148 Ga0207678_10055455 3300026067 Bacteria 3414
149 Ga0207702_10000017 3300026078 Bacteria 222964
150 Ga0207674_10004820 3300026116 Bacteria 16164
151 Ga0207698_10121649 3300026142 Bacteria 2211
152 Ga0209282_1000001 3300027666 Bacteria 2450367
153 Ga0268266_10000021 3300028379 Bacteria 522453
154 Ga0307515_10000306 3300028794 Bacteria 121448
155 Ga0307408_100001280 3300031548 Bacteria 18860
156 Ga0307408_100047748 3300031548 Bacteria 3067
157 Ga0307408_100110077 3300031548 Bacteria 2114
158 Ga0307416_100002116 3300032002 Bacteria 11216
159 Ga0395899_0003332 3300037312 Bacteria 12734
160 Ga0395900_0016090 3300037418 Bacteria 7622
161 Ga0395900_0190823 3300037418 Bacteria 2078
162 Ga0395905_0055102 3300037471 Bacteria 3722
163 Ga0395905_0139059 3300037471 Bacteria 2285
164 Ga0436361_0014746 3300039447 Bacteria 7482
165 Ga0436361_0050170 3300039447 Bacteria 9588
166 Ga0436361_0577165 3300039447 Bacteria 73575
167 Ga0436361_0859400 3300039447 Bacteria 5038
168 Ga0439436_0000185 3300041404 Bacteria 14672
169 Ga0439461_0005639 3300041410 Bacteria 2143
170 Ga0439466_0010140 3300041411 Bacteria 3503
171 Ga0439465_0001494 3300041413 Bacteria 7586
172 Ga0439431_0000612 3300041997 Bacteria 7581
173 Ga0439433_0000572 3300041999 Bacteria 6984
174 Ga0439445_0000976 3300042004 Bacteria 6093
175 Ga0439432_000355 3300042006 Bacteria 16798
176 Ga0439449_0000776 3300042007 Bacteria 12298
177 Ga0439452_002159 3300042010 Bacteria 7439
178 Ga0439457_000792 3300042014 Bacteria 9431
179 Ga0466986_0076163 3300044650 Bacteria 2324
180 Ga0466972_0000034 3300044658 Bacteria 152086
181 Ga0466982_0000009 3300044672 Bacteria 221166
182 Ga0466966_0007198 3300044684 Bacteria 7374
183 Ga0466971_0003599 3300044719 Bacteria 6622
184 Ga0466968_0020190 3300044735 Bacteria 2686
185 Ga0466970_0038403 3300044765 Bacteria 2539
186 Ga0466957_0034066 3300044842 Bacteria 3055
187 Ga0495617_000162 3300046452 Bacteria 42454
188 Ga0495650_0000001 3300046471 Bacteria 1085492
189 Ga0495650_0000687 3300046471 Bacteria 43702
190 Ga0495584_0000646 3300046491 Bacteria 23214
191 Ga0495585_0000003 3300046492 Bacteria 406344
192 Ga0495585_0000321 3300046492 Bacteria 47441
193 Ga0495596_0021989 3300046500 Bacteria 2599
194 Ga0495583_0003326 3300046506 Bacteria 12445
195 Ga0495606_0000245 3300046507 Bacteria 95825
196 Ga0495606_0001150 3300046507 Bacteria 37527
197 Ga0495606_0003020 3300046507 Bacteria 18427
198 Ga0495606_0024452 3300046507 Bacteria 4352
199 Ga0495608_0027630 3300046511 Bacteria 3860
200 Ga0495610_0008721 3300046512 Bacteria 6516
201 Ga0495610_0008927 3300046512 Bacteria 6418
202 Ga0495616_0002507 3300046513 Bacteria 12141
203 Ga0495616_0003933 3300046513 Bacteria 9461
204 Ga0495628_0015220 3300046516 Bacteria 6426
205 Ga0495643_0000051 3300046522 Bacteria 207804
206 Ga0495648_0000011 3300046524 Bacteria 299518
207 Ga0495648_0008531 3300046524 Bacteria 8052
208 Ga0495648_0019763 3300046524 Bacteria 4721
209 Ga0495648_0022189 3300046524 Bacteria 4377
210 Ga0495648_0034863 3300046524 Bacteria 3269
211 Ga0495652_0053424 3300046529 Bacteria 3443
212 Ga0495597_0025053 3300046542 Bacteria 2748
213 Ga0495622_0000002 3300046557 Bacteria 321742
214 Ga0495633_0003109 3300046558 Bacteria 11259
215 Ga0495633_0018182 3300046558 Bacteria 3574
216 Ga0495633_0032527 3300046558 Bacteria 2519
217 Ga0495625_0002813 3300046660 Bacteria 18326
218 Ga0495588_0058327 3300046674 Bacteria 1995
219 Ga0495623_0121706 3300046679 Bacteria 1570
220 Ga0495649_0023907 3300046694 Bacteria 3411
221 Ga0495672_0000030 3300047320 Bacteria 305021
222 Ga0495672_0000036 3300047320 Bacteria 279648
223 Ga0495683_0000007 3300047323 Bacteria 268546
224 Ga0495683_0024095 3300047323 Bacteria 3125
225 Ga0495687_023585 3300047443 Bacteria 2937
226 Ga0495685_019071 3300047447 Bacteria 2355
227 Ga0495686_0000344 3300047472 Bacteria 76585
228 Ga0495686_0001081 3300047472 Bacteria 32449
229 Ga0495602_0066037 3300048088 Bacteria 3119
230 Ga0495626_0001005 3300048091 Bacteria 24227
231 Ga0496102_0000254 3300048905 Bacteria 69564
232 Ga0496103_0009377 3300048906 Bacteria 5797
233 Ga0496103_0058927 3300048906 Bacteria 2386
234 Ga0496108_0044323 3300048911 Bacteria 3714
235 Ga0496110_0033788 3300048913 Bacteria 4427
236 Ga0496114_0125038 3300048917 Bacteria 2216
237 Ga0496117_0113328 3300048920 Bacteria 1684
238 Ga0496119_0017504 3300048922 Bacteria 5386
239 Ga0496120_0005189 3300048923 Bacteria 10508
240 Ga0496121_0046000 3300048924 Bacteria 3741
241 Ga0496121_0051932 3300048924 Bacteria 3448
242 Ga0496124_0000226 3300048927 Bacteria 110448
243 Ga0496125_0001014 3300048928 Bacteria 43645
244 Ga0496125_0002023 3300048928 Bacteria 27465
245 Ga0496125_0002121 3300048928 Bacteria 26658
246 Ga0496126_0010279 3300048929 Bacteria 9829
247 Ga0495678_000040 3300049459 Bacteria 190664
248 Ga0501047_0090070 3300049581 Bacteria 2945
249 nmdc:mga00v17_23895_c1 3300050491 Bacteria 3540
250 nmdc:mga00v17_4347_c1 3300050491 Bacteria 7360
251 Ga0500594_0001524 3300053118 Bacteria 5040
252 Ga0500618_001858 3300053125 Bacteria 8824
253 Ga0500586_000250 3300053145 Bacteria 10708
254 Ga0500639_090868 3300053163 Bacteria 1521
255 Ga0587083_0000503 3300059505 Bacteria 3526
256 Ga0587067_000452 3300059640 Bacteria 3566
257 Ga0587072_000090 3300059643 Bacteria 6986
258 Ga0587111_0010710 3300060346 Bacteria 1581
259 Ga0466962_0000454 3300061719 Bacteria 17775

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005335 Ga0070666_10000012 Ga0070666_10000012104 380
2 3300005347 Ga0070668_100048689 Ga0070668_1000486893 380
3 3300005466 Ga0070685_10043015 Ga0070685_100430152 380
4 3300005548 Ga0070665_100005612 Ga0070665_1000056123 380
5 3300005842 Ga0068858_100052528 Ga0068858_1000525282 380
6 3300009551 Ga0105238_10000109 Ga0105238_100001093 380
7 3300013306 Ga0163162_10000324 Ga0163162_1000032423 380
8 3300025903 Ga0207680_10000013 Ga0207680_10000013104 380
9 3300025909 Ga0207705_10004077 Ga0207705_100040777 380
10 3300025924 Ga0207694_10000122 Ga0207694_1000012253 380
11 3300025972 Ga0207668_10037521 Ga0207668_100375212 380
12 3300028379 Ga0268266_10000021 Ga0268266_10000021107 380
13 3300048924 Ga0496121_0046000 Ga0496121_0046000_427_1770 380
14 3300006028 Ga0070717_10083330 Ga0070717_100833303 381
15 3300046507 Ga0495606_0000245 Ga0495606_0000245_88000_89349 381
16 3300009147 Ga0114129_10313640 Ga0114129_103136402 390
17 3300046471 Ga0495650_0000687 Ga0495650_0000687_8119_9342 394
18 3300046507 Ga0495606_0001150 Ga0495606_0001150_1863_3086 394
19 3300046660 Ga0495625_0002813 Ga0495625_0002813_1704_2930 395
20 iso_pu_bacteria 2548876994 2550696009 399
21 3300001979 JGI24740J21852_10015315 JGI24740J21852_100153152 404
22 3300001989 JGI24739J22299_10000198 JGI24739J22299_100001988 404
23 3300003578 Ga0006562J51391_1019570 Ga0006562J51391_10195702 404
24 3300005455 Ga0070663_100013650 Ga0070663_1000136502 404
25 3300005457 Ga0070662_100041791 Ga0070662_1000417913 404
26 3300005577 Ga0068857_100004064 Ga0068857_1000040643 404
27 3300005616 Ga0068852_100063187 Ga0068852_1000631872 404
28 3300009545 Ga0105237_10000023 Ga0105237_10000023214 404
29 3300010375 Ga0105239_10034292 Ga0105239_100342925 404
30 3300012500 Ga0157314_1000101 Ga0157314_10001019 404
31 3300025297 Ga0209758_1002679 Ga0209758_10026795 404
32 3300025904 Ga0207647_10002969 Ga0207647_100029697 404
33 3300025914 Ga0207671_10000020 Ga0207671_1000002022 404
34 3300025914 Ga0207671_10000033 Ga0207671_10000033233 404
35 3300025933 Ga0207706_10095901 Ga0207706_100959012 404
36 3300025949 Ga0207667_10009332 Ga0207667_100093326 404
37 3300026067 Ga0207678_10055455 Ga0207678_100554552 404
38 3300026116 Ga0207674_10004820 Ga0207674_1000482012 404
39 3300026142 Ga0207698_10121649 Ga0207698_101216492 404
40 3300048924 Ga0496121_0051932 Ga0496121_0051932_645_1988 404
41 3300048928 Ga0496125_0002023 Ga0496125_0002023_7833_9176 404
42 3300050491 nmdc:mga00v17_23895_c1 nmdc:mga00v17_23895_c1_487_1830 407
43 iso_pu_bacteria 2857504554 2857506519 407
44 3300047472 Ga0495686_0001081 Ga0495686_0001081_27439_29013 410
45 iso_pu_bacteria 2842914999 2842915791 412
46 3300039447 Ga0436361_0859400 Ga0436361_0859400_1189_2469 413
47 3300046471 Ga0495650_0000001 Ga0495650_0000001_1063182_1064462 413
48 iso_pu_bacteria 2643221554 2643787201 413
49 iso_pu_bacteria 2643221638 2644215722 413
50 3300046491 Ga0495584_0000646 Ga0495584_0000646_1954_3300 415
51 3300046492 Ga0495585_0000321 Ga0495585_0000321_1569_2915 415
52 3300046500 Ga0495596_0021989 Ga0495596_0021989_1037_2383 415
53 3300046558 Ga0495633_0018182 Ga0495633_0018182_2068_3414 415
54 3300047323 Ga0495683_0000007 Ga0495683_0000007_164333_165679 415
55 3300006051 Ga0075364_10001424 Ga0075364_100014241 416
56 3300010375 Ga0105239_10073223 Ga0105239_100732233 416
57 3300025906 Ga0207699_10128797 Ga0207699_101287971 416
58 3300032002 Ga0307416_100002116 Ga0307416_1000021169 416
59 3300037471 Ga0395905_0055102 Ga0395905_0055102_2071_3387 416
60 3300048927 Ga0496124_0000226 Ga0496124_0000226_173_1516 416
61 3300050491 nmdc:mga00v17_4347_c1 nmdc:mga00v17_4347_c1_3808_5100 416
62 3300002773 JGI25152J39213_1003786 JGI25152J39213_10037863 417
63 3300002774 JGI25150J39212_1003148 JGI25150J39212_10031483 417
64 3300002987 JGI25159J45721_1008180 JGI25159J45721_10081804 417
65 3300003374 JGI25161J50226_1004514 JGI25161J50226_10045144 417
66 3300003775 Ga0055524_1005956 Ga0055524_10059563 417
67 3300003784 Ga0055534_1002008 Ga0055534_10020083 417
68 3300003794 Ga0055531_10016339 Ga0055531_100163393 417
69 3300004625 Ga0055543_1006165 Ga0055543_10061654 417
70 3300005262 Ga0065165_1017972 Ga0065165_10179721 417
71 3300025208 Ga0209436_102316 Ga0209436_1023164 417
72 3300025208 Ga0209436_103052 Ga0209436_1030524 417
73 3300025245 Ga0207425_1000001 Ga0207425_10000011577 417
74 3300025245 Ga0207425_1000249 Ga0207425_100024935 417
75 3300025258 Ga0209129_1000001 Ga0209129_1000001754 417
76 3300025258 Ga0209129_1005202 Ga0209129_10052024 417
77 3300025263 Ga0209565_1000571 Ga0209565_100057126 417
78 3300025284 Ga0209130_1002642 Ga0209130_10026423 417
79 3300025291 Ga0209675_1001467 Ga0209675_10014678 417
80 3300025297 Ga0209758_1000116 Ga0209758_100011615 417
81 3300025298 Ga0209050_1006522 Ga0209050_10065225 417
82 3300025299 Ga0209256_1001951 Ga0209256_100195117 417
83 3300025299 Ga0209256_1007308 Ga0209256_10073082 417
84 3300025304 Ga0209257_1000293 Ga0209257_100029314 417
85 3300031548 Ga0307408_100001280 Ga0307408_10000128017 417
86 3300031548 Ga0307408_100047748 Ga0307408_1000477481 417
87 3300031548 Ga0307408_100110077 Ga0307408_1001100772 417
88 3300041404 Ga0439436_0000185 Ga0439436_0000185_2120_3463 417
89 3300041410 Ga0439461_0005639 Ga0439461_0005639_617_1960 417
90 3300041411 Ga0439466_0010140 Ga0439466_0010140_1965_3308 417
91 3300041413 Ga0439465_0001494 Ga0439465_0001494_5699_7042 417
92 3300041997 Ga0439431_0000612 Ga0439431_0000612_4037_5380 417
93 3300041999 Ga0439433_0000572 Ga0439433_0000572_4162_5505 417
94 3300042004 Ga0439445_0000976 Ga0439445_0000976_407_1750 417
95 3300042006 Ga0439432_000355 Ga0439432_000355_2012_3355 417
96 3300042007 Ga0439449_0000776 Ga0439449_0000776_3994_5337 417
97 3300042010 Ga0439452_002159 Ga0439452_002159_4180_5523 417
98 3300042014 Ga0439457_000792 Ga0439457_000792_2384_3727 417
99 iso_pu_bacteria 2511231026 2511387311 417
100 3300028794 Ga0307515_10000306 Ga0307515_1000030612 418
101 3300037471 Ga0395905_0139059 Ga0395905_0139059_238_1587 418
102 iso_pu_bacteria 2521172590 2521558427 418
103 iso_pu_bacteria 2551306416 2553003403 418
104 iso_pu_bacteria 2765235838 2765569544 418
105 iso_pu_bacteria 2808606386 2808982025 418
106 iso_pu_bacteria 2808606415 2809131648 418
107 iso_pu_bacteria 2808606419 2809151270 418
108 iso_pu_bacteria 2818991449 2819614341 418
109 iso_pu_bacteria 2839094727 2839095574 418
110 iso_pu_bacteria 2852618963 2852622448 418
111 iso_pu_bacteria 2904439833 2904445037 418
112 iso_pu_bacteria 2904530477 2904534134 418
113 iso_pu_bacteria 2904584206 2904589024 418
114 iso_pu_bacteria 2904589729 2904590495 418
115 iso_pu_bacteria 2904601388 2904603631 418
116 iso_pu_bacteria 2919046199 2919046861 418
117 iso_pu_bacteria 2919079590 2919080356 418
118 iso_pu_bacteria 2923510766 2923511531 418
119 iso_pu_bacteria 2928130867 2928131642 418
120 3300005577 Ga0068857_100015353 Ga0068857_1000153532 420
121 3300037312 Ga0395899_0003332 Ga0395899_0003332_6502_7833 420
122 3300037418 Ga0395900_0016090 Ga0395900_0016090_5624_6955 420
123 3300039447 Ga0436361_0050170 Ga0436361_0050170_475_1776 420
124 3300044658 Ga0466972_0000034 Ga0466972_0000034_73051_74382 420
125 3300046512 Ga0495610_0008721 Ga0495610_0008721_2067_3398 420
126 3300046512 Ga0495610_0008927 Ga0495610_0008927_85_1416 420
127 3300046522 Ga0495643_0000051 Ga0495643_0000051_2297_3628 420
128 3300046524 Ga0495648_0008531 Ga0495648_0008531_497_1828 420
129 3300046694 Ga0495649_0023907 Ga0495649_0023907_166_1497 420
130 3300047320 Ga0495672_0000030 Ga0495672_0000030_98234_99565 420
131 3300047320 Ga0495672_0000036 Ga0495672_0000036_232823_234166 420
132 3300048922 Ga0496119_0017504 Ga0496119_0017504_654_1973 420
133 3300048923 Ga0496120_0005189 Ga0496120_0005189_2259_3578 420
134 3300048929 Ga0496126_0010279 Ga0496126_0010279_1482_2801 420
135 3300049459 Ga0495678_000040 Ga0495678_000040_1937_3268 420
136 3300049581 Ga0501047_0090070 Ga0501047_0090070_1569_2912 420
137 3300053145 Ga0500586_000250 Ga0500586_000250_7853_9184 420
138 3300060346 Ga0587111_0010710 Ga0587111_0010710_101_1432 420
139 iso_pu_bacteria 2643221603 2644031250 420
140 iso_pu_bacteria 2818991445 2819593508 420
141 iso_pu_bacteria 2842711865 2842712408 420
142 iso_pu_bacteria 2842775625 2842778549 420
143 3300006946 Ga0079104_1004079 Ga0079104_10040793 421
144 3300021361 Ga0213872_10019123 Ga0213872_100191232 421
145 3300046524 Ga0495648_0034863 Ga0495648_0034863_510_1859 421
146 3300046557 Ga0495622_0000002 Ga0495622_0000002_201903_203249 421
147 3300046674 Ga0495588_0058327 Ga0495588_0058327_641_1984 421
148 3300048906 Ga0496103_0009377 Ga0496103_0009377_302_1645 421
149 3300048928 Ga0496125_0001014 Ga0496125_0001014_41422_42765 421
150 3300053125 Ga0500618_001858 Ga0500618_001858_603_1943 421
151 iso_pu_bacteria 2513237150 2513954658 421
152 iso_pu_bacteria 644736347 644752245 421
153 3300003751 Ga0055538_1000002 Ga0055538_1000002134 422
154 3300003752 Ga0055539_1000002 Ga0055539_1000002134 422
155 3300003756 Ga0055533_1000004 Ga0055533_1000004134 422
156 3300003759 Ga0055525_1000002 Ga0055525_1000002134 422
157 3300003841 Ga0055541_1000002 Ga0055541_1000002708 422
158 3300005563 Ga0068855_100001647 Ga0068855_1000016474 422
159 3300009093 Ga0105240_10037048 Ga0105240_100370483 422
160 3300009545 Ga0105237_10018943 Ga0105237_100189437 422
161 3300009551 Ga0105238_10001243 Ga0105238_1000124319 422
162 3300010375 Ga0105239_10020689 Ga0105239_100206893 422
163 3300015261 Ga0182006_1008048 Ga0182006_10080481 422
164 3300021361 Ga0213872_10008707 Ga0213872_100087073 422
165 3300022467 Ga0224712_10059760 Ga0224712_100597601 422
166 3300025224 Ga0209784_100002 Ga0209784_100002368 422
167 3300025225 Ga0209566_100003 Ga0209566_100003368 422
168 3300025226 Ga0209674_100004 Ga0209674_100004368 422
169 3300025230 Ga0209563_100006 Ga0209563_100006368 422
170 3300025253 Ga0209677_100003 Ga0209677_100003368 422
171 3300025913 Ga0207695_10005250 Ga0207695_100052507 422
172 3300025914 Ga0207671_10012706 Ga0207671_100127063 422
173 3300025924 Ga0207694_10002664 Ga0207694_100026647 422
174 3300025949 Ga0207667_10000032 Ga0207667_10000032175 422
175 3300025949 Ga0207667_10056055 Ga0207667_100560551 422
176 3300039447 Ga0436361_0014746 Ga0436361_0014746_4109_5452 422
177 3300046524 Ga0495648_0022189 Ga0495648_0022189_1612_2952 422
178 3300047447 Ga0495685_019071 Ga0495685_019071_69_1409 422
179 3300048905 Ga0496102_0000254 Ga0496102_0000254_2339_3679 422
180 iso_pu_bacteria 2885192300 2885192612 422
181 iso_pu_bacteria 2885266251 2885268522 422
182 iso_pu_bacteria 2900577576 2900580665 422
183 3300017792 Ga0163161_10029026 Ga0163161_100290261 423
184 3300046452 Ga0495617_000162 Ga0495617_000162_2203_3546 423
185 3300046492 Ga0495585_0000003 Ga0495585_0000003_76466_77809 423
186 3300046507 Ga0495606_0003020 Ga0495606_0003020_1580_2926 423
187 3300046507 Ga0495606_0024452 Ga0495606_0024452_1112_2458 423
188 3300046513 Ga0495616_0002507 Ga0495616_0002507_9398_10741 423
189 3300046524 Ga0495648_0000011 Ga0495648_0000011_1557_2900 423
190 3300046558 Ga0495633_0032527 Ga0495633_0032527_739_2082 423
191 3300047323 Ga0495683_0024095 Ga0495683_0024095_887_2230 423
192 3300053163 Ga0500639_090868 Ga0500639_090868_110_1438 423
193 3300003775 Ga0055524_1000010 Ga0055524_1000010190 424
194 3300006948 Ga0099826_10000002 Ga0099826_10000002231 424
195 3300025299 Ga0209256_1000007 Ga0209256_1000007568 424
196 3300027666 Ga0209282_1000001 Ga0209282_1000001916 424
197 3300044842 Ga0466957_0034066 Ga0466957_0034066_1649_3001 424
198 3300046506 Ga0495583_0003326 Ga0495583_0003326_2057_3400 424
199 3300046511 Ga0495608_0027630 Ga0495608_0027630_1868_3220 424
200 3300046516 Ga0495628_0015220 Ga0495628_0015220_103_1455 424
201 3300046524 Ga0495648_0019763 Ga0495648_0019763_3247_4596 424
202 3300046529 Ga0495652_0053424 Ga0495652_0053424_560_1912 424
203 3300046542 Ga0495597_0025053 Ga0495597_0025053_33_1382 424
204 3300046558 Ga0495633_0003109 Ga0495633_0003109_7998_9347 424
205 3300046679 Ga0495623_0121706 Ga0495623_0121706_114_1466 424
206 3300047443 Ga0495687_023585 Ga0495687_023585_618_1967 424
207 3300047472 Ga0495686_0000344 Ga0495686_0000344_40199_41566 424
208 3300048088 Ga0495602_0066037 Ga0495602_0066037_1193_2545 424
209 3300048906 Ga0496103_0058927 Ga0496103_0058927_746_2098 424
210 3300048911 Ga0496108_0044323 Ga0496108_0044323_945_2297 424
211 3300048913 Ga0496110_0033788 Ga0496110_0033788_493_1845 424
212 3300053118 Ga0500594_0001524 Ga0500594_0001524_2719_4068 424
213 3300005339 Ga0070660_100110728 Ga0070660_1001107282 425
214 3300005344 Ga0070661_100002836 Ga0070661_10000283611 425
215 3300005366 Ga0070659_100000935 Ga0070659_10000093512 425
216 3300005564 Ga0070664_100016726 Ga0070664_1000167263 425
217 3300021361 Ga0213872_10000039 Ga0213872_1000003944 425
218 3300021361 Ga0213872_10013064 Ga0213872_100130643 425
219 3300025233 Ga0209437_105832 Ga0209437_1058322 425
220 3300025272 Ga0209455_1000073 Ga0209455_1000073118 425
221 3300025919 Ga0207657_10054528 Ga0207657_100545283 425
222 3300025920 Ga0207649_10007885 Ga0207649_100078853 425
223 3300025932 Ga0207690_10001019 Ga0207690_100010197 425
224 3300025945 Ga0207679_10000181 Ga0207679_1000018142 425
225 3300039447 Ga0436361_0577165 Ga0436361_0577165_2987_4345 425
226 3300044672 Ga0466982_0000009 Ga0466982_0000009_51720_53054 425
227 3300044684 Ga0466966_0007198 Ga0466966_0007198_5210_6544 425
228 3300044719 Ga0466971_0003599 Ga0466971_0003599_4638_5972 425
229 3300044735 Ga0466968_0020190 Ga0466968_0020190_553_1887 425
230 3300044765 Ga0466970_0038403 Ga0466970_0038403_538_1872 425
231 3300046513 Ga0495616_0003933 Ga0495616_0003933_6570_7925 425
232 3300048091 Ga0495626_0001005 Ga0495626_0001005_22679_24034 425
233 3300048917 Ga0496114_0125038 Ga0496114_0125038_412_1743 425
234 3300061719 Ga0466962_0000454 Ga0466962_0000454_13107_14441 425
235 3300001979 JGI24740J21852_10000951 JGI24740J21852_1000095111 426
236 3300002705 JGI25156J39149_1002066 JGI25156J39149_10020662 426
237 3300002738 JGI25154J39366_1000692 JGI25154J39366_100069210 426
238 3300003565 Ga0006560J51390_1030559 Ga0006560J51390_10305591 426
239 3300003752 Ga0055539_1000062 Ga0055539_100006284 426
240 3300003756 Ga0055533_1001544 Ga0055533_10015443 426
241 3300003758 Ga0055532_1000019 Ga0055532_1000019173 426
242 3300003759 Ga0055525_1000275 Ga0055525_100027514 426
243 3300003761 Ga0055535_1000014 Ga0055535_1000014107 426
244 3300003762 Ga0055542_1000588 Ga0055542_100058819 426
245 3300003763 Ga0055529_1000086 Ga0055529_100008686 426
246 3300003771 Ga0055526_1006643 Ga0055526_10066431 426
247 3300003841 Ga0055541_1000254 Ga0055541_100025416 426
248 3300005344 Ga0070661_100000054 Ga0070661_1000000546 426
249 3300005366 Ga0070659_100003721 Ga0070659_1000037213 426
250 3300005455 Ga0070663_100000010 Ga0070663_10000001089 426
251 3300005564 Ga0070664_100000005 Ga0070664_100000005109 426
252 3300005578 Ga0068854_100000032 Ga0068854_10000003217 426
253 3300005614 Ga0068856_100000054 Ga0068856_10000005490 426
254 3300013100 Ga0157373_10008867 Ga0157373_100088676 426
255 3300013102 Ga0157371_10000103 Ga0157371_1000010324 426
256 3300013104 Ga0157370_10001099 Ga0157370_1000109924 426
257 3300013307 Ga0157372_10000151 Ga0157372_1000015145 426
258 3300015261 Ga0182006_1000747 Ga0182006_10007478 426
259 3300015261 Ga0182006_1039640 Ga0182006_10396402 426
260 3300020069 Ga0197907_10334798 Ga0197907_103347981 426
261 3300020070 Ga0206356_10282866 Ga0206356_102828663 426
262 3300020075 Ga0206349_1270541 Ga0206349_12705413 426
263 3300020076 Ga0206355_1081799 Ga0206355_10817994 426
264 3300020077 Ga0206351_10614052 Ga0206351_106140527 426
265 3300020610 Ga0154015_1423277 Ga0154015_14232779 426
266 3300022467 Ga0224712_10049439 Ga0224712_100494392 426
267 3300025224 Ga0209784_100003 Ga0209784_1000031170 426
268 3300025225 Ga0209566_100002 Ga0209566_1000022124 426
269 3300025226 Ga0209674_100008 Ga0209674_10000861 426
270 3300025229 Ga0209147_100002 Ga0209147_1000021244 426
271 3300025230 Ga0209563_100004 Ga0209563_1000041541 426
272 3300025230 Ga0209563_109217 Ga0209563_1092171 426
273 3300025242 Ga0209258_100002 Ga0209258_1000021244 426
274 3300025253 Ga0209677_100009 Ga0209677_10000991 426
275 3300025256 Ga0209759_1011670 Ga0209759_10116703 426
276 3300025256 Ga0209759_1017630 Ga0209759_10176302 426
277 3300025272 Ga0209455_1000076 Ga0209455_1000076172 426
278 3300025295 Ga0209564_1000434 Ga0209564_100043410 426
279 3300025913 Ga0207695_10002741 Ga0207695_1000274123 426
280 3300025920 Ga0207649_10004567 Ga0207649_100045675 426
281 3300025932 Ga0207690_10022760 Ga0207690_100227603 426
282 3300025945 Ga0207679_10000020 Ga0207679_10000020106 426
283 3300025981 Ga0207640_10000017 Ga0207640_1000001717 426
284 3300026067 Ga0207678_10000008 Ga0207678_10000008106 426
285 3300026078 Ga0207702_10000017 Ga0207702_10000017106 426
286 3300037418 Ga0395900_0190823 Ga0395900_0190823_369_1688 426
287 3300044650 Ga0466986_0076163 Ga0466986_0076163_55_1374 426
288 3300048920 Ga0496117_0113328 Ga0496117_0113328_215_1534 426
289 3300048928 Ga0496125_0002121 Ga0496125_0002121_23991_25310 426
290 3300059505 Ga0587083_0000503 Ga0587083_0000503_1365_2684 426
291 3300059640 Ga0587067_000452 Ga0587067_000452_1392_2711 426
292 3300059643 Ga0587072_000090 Ga0587072_000090_863_2182 426

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

58

382

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sp5-assembly1.cif.gz_A crystal structure of a eukaryotic phosphate transporter 0.7882 24 408
7sp5-assembly2.cif.gz_B crystal structure of a eukaryotic phosphate transporter 0.7692 26 408
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.7672 59 406
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.7411 24 410
4gby-assembly1.cif.gz_A the structure of the mfs (major facilitator superfamily) proton:xylose symporter xyle bound to d-xylose 0.7392 26 408
ID Description Score Start End Superfamily
af_P76350_21_243_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9157 27 235 1.20.1250.20
af_P0C0L7_23_240_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9141 26 238 1.20.1250.20
af_P0C0L7_23_240_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8863 26 238 1.20.1250.20
af_P37643_245_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8859 251 406 1.20.1250.20
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8749 27 236 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A519LZQ1-F1-model_v4 MFS transporter 0.9824 16 390 GO:0005886
GO:0022857
AF-A0A527HA57-F1-model_v4 MHS family MFS transporter 0.9759 20 365 GO:0005886
GO:0022857
AF-A0A529M8X8-F1-model_v4 MHS family MFS transporter 0.9702 23 310 GO:0005886
GO:0022857
AF-A0A529VVH3-F1-model_v4 deleted 0.9656 18 220
AF-A0A529M8X8-F1-model_v4 MHS family MFS transporter 0.9604 23 310 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
83.3 0.84 High
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Predicted Structure (AlphaFold2)

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