F390696

General Info

Members Datasets Scaffolds Average Seq Length
292 199 584 527

Family's Representative Sequence

Representative Sequence 3300003758|Ga0055532_1001494|Ga0055532_10014944
Length 622
Sequence LEIVVAQYWSLLYNNFKSLEYCFNTDMGGWRNELLQMRREGSGWERGGMPSLQGRRSCLLQSLQWERKHRVGPFFLQPLYYYCKGELCLSMIPTNPYPMVIDAEMLPGYDEILTPEAIQFIGKLEQRFGDRRLELLAKREERQTQIDEGQLPDFLPQTDAIREGDWTVAPLPADLLDRRVEITGPAGDRKMVINALNSGARLFMADFEDANSPTWINTIQGQINMKDAVRRTISFTSPEKKRYTLNENIAVLKVRPRGLHMEEKHIRLDGKPVSASFVDFGLYFYHNVQPLLAQGTAPYFYLPKLEGHLEARLWNDVFVFAQEELGIPQGTIRATVLIETIMAAFEMDEILYELREHSSGLNCGRWDYIFSYIKKLRNQPHVILPDRSQVTMTVPFMKAYTSLAVKTCHKRMAPCIGGMAAQIPVKNDPIKNDEALAKVRADKEREAYDGHDGTWVAHPGLVKVAMEVFNRLMRESNQIWYKREDVLVTAADLLAVPAGEITEEGVRTNISVGIQYIEAWLRGAGAVPIRNLMEDAATAEISRAQVWQWIRHPQGILPDGRKITIGLIRQWTSEEMHLLKQELGEEKVQQGQFQVAGELFLKLVTEDAFEDFLTILGYRYLA

Samples

Sample ID Description Type Environment
1 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
120 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
121 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
122 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
123 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
124 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
125 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
126 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
127 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
139 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
140 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
184 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
185 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
186 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
187 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
188 2671180694 Paenibacillus sp. A3 Isolate Unclassified
189 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
190 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
191 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
192 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
193 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
194 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
195 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
196 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
197 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
198 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
199 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.84
Metatranscriptomes 0.34
Isolates 5.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0.34
Rhizoplane 5.14
Rhizosphere 90.41
Stem 0
Stem Tuber 0
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055532_1001494 3300003758 Bacteria 6449
2 JGI25406J46586_10000112 3300003203 Bacteria 35725
3 JGI25406J46586_10014402 3300003203 Bacteria 3365
4 JGI25406J46586_10023297 3300003203 Bacteria 2449
5 Ga0065704_10105435 3300005289 Bacteria 2111
6 Ga0065715_10009957 3300005293 Bacteria 2513
7 Ga0065715_10027434 3300005293 Bacteria 1679
8 Ga0070658_10044341 3300005327 Bacteria 3594
9 Ga0070676_10017105 3300005328 Bacteria 4010
10 Ga0070683_100023231 3300005329 Bacteria 5545
11 Ga0070670_100003045 3300005331 Bacteria 13867
12 Ga0070670_100117717 3300005331 Bacteria 2291
13 Ga0070666_10019898 3300005335 Bacteria 4336
14 Ga0070666_10020366 3300005335 Bacteria 4287
15 Ga0070666_10032419 3300005335 Bacteria 3451
16 Ga0070680_100001066 3300005336 Bacteria 19665
17 Ga0070682_100025904 3300005337 Bacteria 3504
18 Ga0068868_100121893 3300005338 Bacteria 2127
19 Ga0070661_100000046 3300005344 Bacteria 92262
20 Ga0070668_100044553 3300005347 Bacteria 3403
21 Ga0070669_100006376 3300005353 Bacteria 8499
22 Ga0070671_100012422 3300005355 Bacteria 6857
23 Ga0070671_100017969 3300005355 Bacteria 5737
24 Ga0070671_100040675 3300005355 Bacteria 3862
25 Ga0070671_100074244 3300005355 Bacteria 2841
26 Ga0070674_100018843 3300005356 Bacteria 4373
27 Ga0070673_100179755 3300005364 Bacteria 1810
28 Ga0070659_100000008 3300005366 Bacteria 204009
29 Ga0070667_100007752 3300005367 Bacteria 8902
30 Ga0070713_100112234 3300005436 Unclassified 2378
31 Ga0070710_10027677 3300005437 Bacteria 3025
32 Ga0070711_100013690 3300005439 Bacteria 5098
33 Ga0070694_100082677 3300005444 Bacteria 2236
34 Ga0070678_100057133 3300005456 Bacteria 2857
35 Ga0070681_10000154 3300005458 Bacteria 52563
36 Ga0070706_100000511 3300005467 Bacteria 45508
37 Ga0070706_100015676 3300005467 Bacteria 7000
38 Ga0070706_100030090 3300005467 Bacteria 5001
39 Ga0070706_100091702 3300005467 Bacteria 2818
40 Ga0070698_100023971 3300005471 Bacteria 6371
41 Ga0070698_100030499 3300005471 Bacteria 5590
42 Ga0070679_100000586 3300005530 Bacteria 30810
43 Ga0070697_100021071 3300005536 Bacteria 5162
44 Ga0070697_100022723 3300005536 Bacteria 4982
45 Ga0070697_100052434 3300005536 Bacteria 3314
46 Ga0070672_100006804 3300005543 Bacteria 7720
47 Ga0070686_100007162 3300005544 Bacteria 6214
48 Ga0070696_100120411 3300005546 Bacteria 1899
49 Ga0070665_100002147 3300005548 Bacteria 22017
50 Ga0070665_100027771 3300005548 Bacteria 5697
51 Ga0070665_100116058 3300005548 Bacteria 2680
52 Ga0070704_100015871 3300005549 Bacteria 4743
53 Ga0068856_100244261 3300005614 Bacteria 1810
54 Ga0070702_100012337 3300005615 Bacteria 4278
55 Ga0068866_10032981 3300005718 Bacteria 2508
56 Ga0068861_100013606 3300005719 Bacteria 5696
57 Ga0068861_100051851 3300005719 Bacteria 3117
58 Ga0068861_100144732 3300005719 Bacteria 1944
59 Ga0068863_100076711 3300005841 Bacteria 3162
60 Ga0081455_10001533 3300005937 Bacteria 28455
61 Ga0081455_10002450 3300005937 Bacteria 22097
62 Ga0081455_10006011 3300005937 Bacteria 13156
63 Ga0081538_10013623 3300005981 Bacteria 6430
64 Ga0081540_1000018 3300005983 Bacteria 164931
65 Ga0081540_1003424 3300005983 Bacteria 12543
66 Ga0081540_1023952 3300005983 Bacteria 3554
67 Ga0081539_10000052 3300005985 Bacteria 268240
68 Ga0081539_10000607 3300005985 Bacteria 72839
69 Ga0081539_10003467 3300005985 Bacteria 19305
70 Ga0081539_10008307 3300005985 Bacteria 9086
71 Ga0081539_10039371 3300005985 Bacteria 2790
72 Ga0070717_10007637 3300006028 Bacteria 8038
73 Ga0070717_10035182 3300006028 Bacteria 4052
74 Ga0070717_10051797 3300006028 Bacteria 3380
75 Ga0070717_10125507 3300006028 Bacteria 2203
76 Ga0070712_100035801 3300006175 Bacteria 3372
77 Ga0070712_100067336 3300006175 Bacteria 2548
78 Ga0070712_100076830 3300006175 Bacteria 2405
79 Ga0068871_100033525 3300006358 Bacteria 4067
80 Ga0068871_100094263 3300006358 Bacteria 2499
81 Ga0075433_10060299 3300006852 Bacteria 3321
82 Ga0075436_100066315 3300006914 Bacteria 2494
83 Ga0075435_100011089 3300007076 Bacteria 6609
84 Ga0075435_100083309 3300007076 Bacteria 2629
85 Ga0105250_10041201 3300009092 Bacteria 1852
86 Ga0105240_10083945 3300009093 Bacteria 3907
87 Ga0105245_10003898 3300009098 Bacteria 13261
88 Ga0105245_10014696 3300009098 Bacteria 6816
89 Ga0114129_10002434 3300009147 Bacteria 25829
90 Ga0114129_10133657 3300009147 Bacteria 3406
91 Ga0114129_10202042 3300009147 Bacteria 2691
92 Ga0105243_10056880 3300009148 Bacteria 3113
93 Ga0105241_10009911 3300009174 Bacteria 7002
94 Ga0105241_10026269 3300009174 Bacteria 4331
95 Ga0105242_10057522 3300009176 Bacteria 3185
96 Ga0105238_10209844 3300009551 Bacteria 1923
97 Ga0105249_10005728 3300009553 Bacteria 10745
98 Ga0099796_10019544 3300010159 Bacteria 2056
99 Ga0157371_10137033 3300013102 Bacteria 1743
100 Ga0157374_10006932 3300013296 Bacteria 9637
101 Ga0157374_10007907 3300013296 Bacteria 9079
102 Ga0163162_10088830 3300013306 Bacteria 3170
103 Ga0157372_10011336 3300013307 Bacteria 9480
104 Ga0157372_10099695 3300013307 Bacteria 3314
105 Ga0157375_10001331 3300013308 Bacteria 21293
106 Ga0157375_10003513 3300013308 Bacteria 13593
107 Ga0157375_10019888 3300013308 Bacteria 6121
108 Ga0157375_10025585 3300013308 Bacteria 5488
109 Ga0157375_10065517 3300013308 Bacteria 3622
110 Ga0157379_10160265 3300014968 Bacteria 2031
111 Ga0157376_10045378 3300014969 Bacteria 3618
112 Ga0163161_10016534 3300017792 Bacteria 5151
113 Ga0206351_10592370 3300020077 Bacteria 2921
114 Ga0209147_100136 3300025229 Bacteria 117683
115 Ga0207666_1000443 3300025271 Bacteria 5363
116 Ga0207697_10000626 3300025315 Bacteria 20087
117 Ga0207697_10009512 3300025315 Bacteria 4195
118 Ga0207692_10007004 3300025898 Bacteria 4602
119 Ga0207688_10004890 3300025901 Bacteria 7294
120 Ga0207688_10049735 3300025901 Bacteria 2344
121 Ga0207680_10036199 3300025903 Bacteria 2841
122 Ga0207680_10052595 3300025903 Bacteria 2441
123 Ga0207685_10004470 3300025905 Bacteria 3561
124 Ga0207685_10026472 3300025905 Bacteria 2018
125 Ga0207699_10010009 3300025906 Bacteria 4743
126 Ga0207699_10053330 3300025906 Bacteria 2397
127 Ga0207645_10020567 3300025907 Bacteria 4319
128 Ga0207645_10027928 3300025907 Bacteria 3643
129 Ga0207684_10000186 3300025910 Bacteria 98342
130 Ga0207684_10035226 3300025910 Bacteria 4251
131 Ga0207684_10053361 3300025910 Bacteria 3432
132 Ga0207654_10006837 3300025911 Bacteria 5741
133 Ga0207654_10015086 3300025911 Bacteria 4001
134 Ga0207707_10007062 3300025912 Bacteria 9788
135 Ga0207693_10006166 3300025915 Bacteria 9947
136 Ga0207693_10008567 3300025915 Bacteria 8372
137 Ga0207693_10039587 3300025915 Bacteria 3712
138 Ga0207663_10004016 3300025916 Bacteria 7288
139 Ga0207660_10000903 3300025917 Bacteria 19526
140 Ga0207662_10009488 3300025918 Bacteria 5357
141 Ga0207657_10062960 3300025919 Bacteria 3174
142 Ga0207649_10000072 3300025920 Bacteria 87103
143 Ga0207652_10000012 3300025921 Bacteria 235382
144 Ga0207652_10124853 3300025921 Bacteria 2292
145 Ga0207646_10002142 3300025922 Bacteria 23602
146 Ga0207646_10102669 3300025922 Bacteria 2564
147 Ga0207681_10005359 3300025923 Bacteria 7882
148 Ga0207681_10014005 3300025923 Bacteria 4971
149 Ga0207650_10091653 3300025925 Bacteria 2323
150 Ga0207659_10026552 3300025926 Bacteria 3908
151 Ga0207700_10087133 3300025928 Bacteria 2455
152 Ga0207700_10133107 3300025928 Unclassified 2033
153 Ga0207664_10018819 3300025929 Bacteria 5094
154 Ga0207664_10161529 3300025929 Bacteria 1911
155 Ga0207644_10039776 3300025931 Bacteria 3320
156 Ga0207644_10046371 3300025931 Bacteria 3096
157 Ga0207690_10000398 3300025932 Bacteria 28734
158 Ga0207706_10016144 3300025933 Bacteria 6745
159 Ga0207706_10059757 3300025933 Bacteria 3357
160 Ga0207709_10036994 3300025935 Bacteria 2897
161 Ga0207669_10011206 3300025937 Bacteria 4355
162 Ga0207665_10030379 3300025939 Bacteria 3569
163 Ga0207665_10039962 3300025939 Bacteria 3129
164 Ga0207691_10001501 3300025940 Bacteria 23232
165 Ga0207691_10049631 3300025940 Bacteria 3845
166 Ga0207691_10074130 3300025940 Bacteria 3070
167 Ga0207667_10091366 3300025949 Bacteria 3145
168 Ga0207712_10013965 3300025961 Bacteria 5153
169 Ga0207658_10082841 3300025986 Bacteria 2464
170 Ga0207677_10016269 3300026023 Bacteria 4399
171 Ga0207677_10062551 3300026023 Bacteria 2582
172 Ga0207702_10116354 3300026078 Bacteria 2386
173 Ga0207648_10006251 3300026089 Bacteria 11859
174 Ga0207675_100003335 3300026118 Bacteria 15717
175 Ga0207675_100036081 3300026118 Bacteria 4611
176 Ga0207675_100078299 3300026118 Bacteria 3097
177 Ga0207675_100225948 3300026118 Bacteria 1805
178 Ga0207683_10037777 3300026121 Bacteria 4207
179 Ga0207683_10110362 3300026121 Bacteria 2463
180 Ga0209974_10012309 3300027876 Bacteria 2861
181 Ga0207428_10003225 3300027907 Bacteria 15924
182 Ga0268266_10004427 3300028379 Bacteria 13451
183 Ga0268266_10015822 3300028379 Bacteria 6460
184 Ga0268266_10022141 3300028379 Bacteria 5416
185 Ga0265331_10000236 3300031250 Bacteria 66655
186 Ga0265327_10000007 3300031251 Bacteria 678515
187 Ga0265314_10031645 3300031711 Bacteria 3902
188 Ga0307409_100050750 3300031995 Bacteria 3170
189 Ga0307411_10096412 3300032005 Bacteria 2079
190 Ga0307415_100028542 3300032126 Bacteria 3552
191 Ga0373948_0001187 3300034817 Bacteria 3538
192 Ga0373958_0000364 3300034819 Bacteria 5441
193 Ga0373949_0000409 3300035090 Bacteria 14941
194 Ga0373952_0000087 3300035092 Bacteria 12383
195 Ga0373939_0002446 3300035114 Bacteria 4380
196 Ga0373941_0000107 3300035115 Bacteria 14073
197 Ga0373943_0049877 3300035170 Bacteria 2055
198 Ga0373942_0000509 3300035207 Bacteria 10928
199 Ga0373933_0057435 3300035724 Bacteria 2339
200 Ga0373947_0023604 3300035725 Bacteria 3580
201 Ga0373937_0021000 3300036401 Bacteria 5857
202 Ga0373925_0019780 3300037068 Bacteria 4901
203 Ga0373925_0058300 3300037068 Bacteria 2895
204 Ga0395900_0012252 3300037418 Bacteria 8767
205 Ga0395900_0059723 3300037418 Bacteria 3925
206 Ga0395898_0016408 3300037466 Bacteria 7580
207 Ga0395898_0050352 3300037466 Bacteria 4077
208 Ga0395905_0000552 3300037471 Bacteria 51126
209 Ga0395905_0002437 3300037471 Bacteria 20614
210 Ga0395905_0020236 3300037471 Bacteria 6305
211 Ga0395905_0118499 3300037471 Bacteria 2488
212 Ga0395901_0029850 3300038443 Bacteria 5615
213 Ga0395901_0072569 3300038443 Bacteria 3589
214 Ga0436361_0383589 3300039447 Bacteria 3531
215 Ga0436361_1035861 3300039447 Bacteria 2045
216 Ga0466958_0081190 3300045836 Bacteria 1995
217 Ga0466967_0047535 3300045976 Bacteria 3741
218 Ga0495580_0000708 3300046472 Bacteria 28474
219 Ga0495585_0032215 3300046492 Bacteria 2970
220 Ga0495637_0024838 3300046520 Bacteria 2708
221 Ga0495652_0125831 3300046529 Bacteria 2036
222 Ga0495633_0050533 3300046558 Bacteria 1960
223 Ga0495658_0023850 3300046683 Bacteria 3252
224 Ga0495675_0031794 3300047444 Bacteria 3370
225 Ga0496101_0037455 3300048904 Bacteria 3440
226 Ga0496102_0013360 3300048905 Bacteria 7112
227 Ga0496103_0002445 3300048906 Bacteria 11681
228 Ga0496105_0094315 3300048908 Bacteria 2471
229 Ga0496106_0010881 3300048909 Bacteria 6722
230 Ga0496106_0027190 3300048909 Bacteria 4260
231 Ga0496107_0002445 3300048910 Bacteria 12042
232 Ga0496107_0050916 3300048910 Bacteria 2986
233 Ga0496111_0147980 3300048914 Bacteria 1742
234 Ga0496112_0048254 3300048915 Bacteria 4175
235 Ga0496112_0048258 3300048915 Bacteria 4175
236 Ga0496114_0095342 3300048917 Bacteria 2532
237 Ga0496115_0006346 3300048918 Bacteria 8659
238 Ga0496115_0023099 3300048918 Bacteria 4824
239 Ga0496115_0141343 3300048918 Bacteria 1986
240 Ga0496126_0000333 3300048929 Bacteria 100416
241 Ga0496126_0001427 3300048929 Bacteria 37551
242 Ga0501033_0040882 3300049570 Bacteria 3461
243 Ga0501033_0050559 3300049570 Bacteria 3083
244 Ga0501034_0007901 3300049571 Bacteria 11299
245 Ga0501034_0079635 3300049571 Bacteria 3280
246 Ga0501036_0112620 3300049572 Bacteria 2299
247 Ga0501037_0026524 3300049573 Bacteria 4283
248 Ga0501038_0028157 3300049574 Bacteria 4992
249 Ga0501039_0052643 3300049575 Bacteria 3149
250 Ga0501040_0007791 3300049576 Bacteria 6934
251 Ga0501041_0008112 3300049577 Bacteria 6183
252 Ga0501042_0044496 3300049578 Bacteria 3163
253 Ga0501046_0147034 3300049580 Bacteria 1779
254 Ga0501047_0013204 3300049581 Bacteria 7821
255 Ga0501048_0009002 3300049582 Bacteria 7515
256 Ga0501070_0001547 3300049586 Bacteria 20452
257 Ga0501070_0010668 3300049586 Bacteria 7771
258 Ga0501073_0035697 3300049589 Bacteria 3532
259 Ga0501075_0015027 3300049591 Bacteria 5553
260 Ga0501079_0148893 3300049741 Bacteria 1825
261 Ga0501080_0059225 3300049742 Bacteria 3565
262 Ga0501080_0222251 3300049742 Bacteria 1728
263 Ga0501081_0026147 3300049743 Bacteria 3932
264 Ga0501044_0022215 3300049823 Bacteria 6761
265 Ga0501045_0015877 3300049824 Bacteria 5341
266 nmdc:mga05p37_11217_c1 3300050507 Bacteria 10653
267 nmdc:mga05p37_62500_c1 3300050507 Bacteria 4583
268 nmdc:mga09592_80689_c1 3300050508 Bacteria 2770
269 nmdc:mga0n895_280354_c1 3300050512 Bacteria 1690
270 nmdc:mga0n895_67706_c1 3300050512 Bacteria 3537
271 nmdc:mga0rr50_1032_c1 3300050513 Bacteria 15072
272 nmdc:mga0a205_230651_c1 3300050515 Bacteria 1734
273 nmdc:mga0a205_32244_c1 3300050515 Bacteria 5024
274 Ga0501084_0034421 3300054114 Bacteria 4236
275 Ga0501082_0007713 3300060353 Bacteria 9289
276 2511175942 2510917027 Bacteria 5287437
277 2512640390 2512564013 Bacteria 6286191
278 2526061454 2524614857 Bacteria 4146328
279 2587737394 2585428059 Bacteria 8696589
280 2644425807 2643221676 Bacteria 8119172
281 2673819261 2671180694 Bacteria 7506943
282 2740062614 2739367875 Bacteria 4157290
283 2857472133 2857465823 Bacteria 6772595
284 2857505155 2857504554 Bacteria 5369913
285 2857597404 2857591370 Bacteria 6569758
286 2884964477 2884960567 Bacteria 5437054
287 2898908227 2898907183 Bacteria 4067722
288 2915598463 2915597211 Bacteria 6475886
289 2915610801 2915606848 Bacteria 6032732
290 2929183600 2929183550 Bacteria 6377511
291 2956900674 2956897341 Bacteria 5447711
292 2980131111 2980125574 Bacteria 5567337
293 Ga0055532_1001494
294 JGI25406J46586_10000112
295 JGI25406J46586_10014402
296 JGI25406J46586_10023297
297 Ga0065704_10105435
298 Ga0065715_10009957
299 Ga0065715_10027434
300 Ga0070658_10044341
301 Ga0070676_10017105
302 Ga0070683_100023231
303 Ga0070670_100003045
304 Ga0070670_100117717
305 Ga0070666_10019898
306 Ga0070666_10020366
307 Ga0070666_10032419
308 Ga0070680_100001066
309 Ga0070682_100025904
310 Ga0068868_100121893
311 Ga0070661_100000046
312 Ga0070668_100044553
313 Ga0070669_100006376
314 Ga0070671_100012422
315 Ga0070671_100017969
316 Ga0070671_100040675
317 Ga0070671_100074244
318 Ga0070674_100018843
319 Ga0070673_100179755
320 Ga0070659_100000008
321 Ga0070667_100007752
322 Ga0070713_100112234
323 Ga0070710_10027677
324 Ga0070711_100013690
325 Ga0070694_100082677
326 Ga0070678_100057133
327 Ga0070681_10000154
328 Ga0070706_100000511
329 Ga0070706_100015676
330 Ga0070706_100030090
331 Ga0070706_100091702
332 Ga0070698_100023971
333 Ga0070698_100030499
334 Ga0070679_100000586
335 Ga0070697_100021071
336 Ga0070697_100022723
337 Ga0070697_100052434
338 Ga0070672_100006804
339 Ga0070686_100007162
340 Ga0070696_100120411
341 Ga0070665_100002147
342 Ga0070665_100027771
343 Ga0070665_100116058
344 Ga0070704_100015871
345 Ga0068856_100244261
346 Ga0070702_100012337
347 Ga0068866_10032981
348 Ga0068861_100013606
349 Ga0068861_100051851
350 Ga0068861_100144732
351 Ga0068863_100076711
352 Ga0081455_10001533
353 Ga0081455_10002450
354 Ga0081455_10006011
355 Ga0081538_10013623
356 Ga0081540_1000018
357 Ga0081540_1003424
358 Ga0081540_1023952
359 Ga0081539_10000052
360 Ga0081539_10000607
361 Ga0081539_10003467
362 Ga0081539_10008307
363 Ga0081539_10039371
364 Ga0070717_10007637
365 Ga0070717_10035182
366 Ga0070717_10051797
367 Ga0070717_10125507
368 Ga0070712_100035801
369 Ga0070712_100067336
370 Ga0070712_100076830
371 Ga0068871_100033525
372 Ga0068871_100094263
373 Ga0075433_10060299
374 Ga0075436_100066315
375 Ga0075435_100011089
376 Ga0075435_100083309
377 Ga0105250_10041201
378 Ga0105240_10083945
379 Ga0105245_10003898
380 Ga0105245_10014696
381 Ga0114129_10002434
382 Ga0114129_10133657
383 Ga0114129_10202042
384 Ga0105243_10056880
385 Ga0105241_10009911
386 Ga0105241_10026269
387 Ga0105242_10057522
388 Ga0105238_10209844
389 Ga0105249_10005728
390 Ga0099796_10019544
391 Ga0157371_10137033
392 Ga0157374_10006932
393 Ga0157374_10007907
394 Ga0163162_10088830
395 Ga0157372_10011336
396 Ga0157372_10099695
397 Ga0157375_10001331
398 Ga0157375_10003513
399 Ga0157375_10019888
400 Ga0157375_10025585
401 Ga0157375_10065517
402 Ga0157379_10160265
403 Ga0157376_10045378
404 Ga0163161_10016534
405 Ga0206351_10592370
406 Ga0209147_100136
407 Ga0207666_1000443
408 Ga0207697_10000626
409 Ga0207697_10009512
410 Ga0207692_10007004
411 Ga0207688_10004890
412 Ga0207688_10049735
413 Ga0207680_10036199
414 Ga0207680_10052595
415 Ga0207685_10004470
416 Ga0207685_10026472
417 Ga0207699_10010009
418 Ga0207699_10053330
419 Ga0207645_10020567
420 Ga0207645_10027928
421 Ga0207684_10000186
422 Ga0207684_10035226
423 Ga0207684_10053361
424 Ga0207654_10006837
425 Ga0207654_10015086
426 Ga0207707_10007062
427 Ga0207693_10006166
428 Ga0207693_10008567
429 Ga0207693_10039587
430 Ga0207663_10004016
431 Ga0207660_10000903
432 Ga0207662_10009488
433 Ga0207657_10062960
434 Ga0207649_10000072
435 Ga0207652_10000012
436 Ga0207652_10124853
437 Ga0207646_10002142
438 Ga0207646_10102669
439 Ga0207681_10005359
440 Ga0207681_10014005
441 Ga0207650_10091653
442 Ga0207659_10026552
443 Ga0207700_10087133
444 Ga0207700_10133107
445 Ga0207664_10018819
446 Ga0207664_10161529
447 Ga0207644_10039776
448 Ga0207644_10046371
449 Ga0207690_10000398
450 Ga0207706_10016144
451 Ga0207706_10059757
452 Ga0207709_10036994
453 Ga0207669_10011206
454 Ga0207665_10030379
455 Ga0207665_10039962
456 Ga0207691_10001501
457 Ga0207691_10049631
458 Ga0207691_10074130
459 Ga0207667_10091366
460 Ga0207712_10013965
461 Ga0207658_10082841
462 Ga0207677_10016269
463 Ga0207677_10062551
464 Ga0207702_10116354
465 Ga0207648_10006251
466 Ga0207675_100003335
467 Ga0207675_100036081
468 Ga0207675_100078299
469 Ga0207675_100225948
470 Ga0207683_10037777
471 Ga0207683_10110362
472 Ga0209974_10012309
473 Ga0207428_10003225
474 Ga0268266_10004427
475 Ga0268266_10015822
476 Ga0268266_10022141
477 Ga0265331_10000236
478 Ga0265327_10000007
479 Ga0265314_10031645
480 Ga0307409_100050750
481 Ga0307411_10096412
482 Ga0307415_100028542
483 Ga0373948_0001187
484 Ga0373958_0000364
485 Ga0373949_0000409
486 Ga0373952_0000087
487 Ga0373939_0002446
488 Ga0373941_0000107
489 Ga0373943_0049877
490 Ga0373942_0000509
491 Ga0373933_0057435
492 Ga0373947_0023604
493 Ga0373937_0021000
494 Ga0373925_0019780
495 Ga0373925_0058300
496 Ga0395900_0012252
497 Ga0395900_0059723
498 Ga0395898_0016408
499 Ga0395898_0050352
500 Ga0395905_0000552
501 Ga0395905_0002437
502 Ga0395905_0020236
503 Ga0395905_0118499
504 Ga0395901_0029850
505 Ga0395901_0072569
506 Ga0436361_0383589
507 Ga0436361_1035861
508 Ga0466958_0081190
509 Ga0466967_0047535
510 Ga0495580_0000708
511 Ga0495585_0032215
512 Ga0495637_0024838
513 Ga0495652_0125831
514 Ga0495633_0050533
515 Ga0495658_0023850
516 Ga0495675_0031794
517 Ga0496101_0037455
518 Ga0496102_0013360
519 Ga0496103_0002445
520 Ga0496105_0094315
521 Ga0496106_0010881
522 Ga0496106_0027190
523 Ga0496107_0002445
524 Ga0496107_0050916
525 Ga0496111_0147980
526 Ga0496112_0048254
527 Ga0496112_0048258
528 Ga0496114_0095342
529 Ga0496115_0006346
530 Ga0496115_0023099
531 Ga0496115_0141343
532 Ga0496126_0000333
533 Ga0496126_0001427
534 Ga0501033_0040882
535 Ga0501033_0050559
536 Ga0501034_0007901
537 Ga0501034_0079635
538 Ga0501036_0112620
539 Ga0501037_0026524
540 Ga0501038_0028157
541 Ga0501039_0052643
542 Ga0501040_0007791
543 Ga0501041_0008112
544 Ga0501042_0044496
545 Ga0501046_0147034
546 Ga0501047_0013204
547 Ga0501048_0009002
548 Ga0501070_0001547
549 Ga0501070_0010668
550 Ga0501073_0035697
551 Ga0501075_0015027
552 Ga0501079_0148893
553 Ga0501080_0059225
554 Ga0501080_0222251
555 Ga0501081_0026147
556 Ga0501044_0022215
557 Ga0501045_0015877
558 nmdc:mga05p37_11217_c1
559 nmdc:mga05p37_62500_c1
560 nmdc:mga09592_80689_c1
561 nmdc:mga0n895_280354_c1
562 nmdc:mga0n895_67706_c1
563 nmdc:mga0rr50_1032_c1
564 nmdc:mga0a205_230651_c1
565 nmdc:mga0a205_32244_c1
566 Ga0501084_0034421
567 Ga0501082_0007713
568 2511175942
569 2512640390
570 2526061454
571 2587737394
572 2644425807
573 2673819261
574 2740062614
575 2857472133
576 2857505155
577 2857597404
578 2884964477
579 2898908227
580 2915598463
581 2915610801
582 2929183600
583 2956900674
584 2980131111

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01274

MS_TIM-barrel

Malate synthase, TIM barrel domain

251

496

0.98

PF20659

MS_C

Malate synthase, C-terminal

500

621

0.95

PF20656

MS_N

Malate synthase, N-terminal domain

98

160

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cux-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9935 9 531
3cux-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9896 9 531
3cv2-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9824 9 531
3cv2-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9768 9 531
3qqw-assembly1.cif.gz_B crystal structure of a putative lyase (reut_b4148) from ralstonia eutropha jmp134 at 2.44 a resolution 0.8315 86 378
ID Description Score Start End Superfamily
3cuxA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 0.9944 9 407 3.20.20.360
3cuxA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 0.9866 9 407 3.20.20.360
3cuxA02 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9772 411 531 1.20.1220.12
af_Q10663_846_963_1.20.1220.12 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9627 412 531 1.20.1220.12
af_A0A1D6E7V9_424_548_1.20.1220.12 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9626 412 529 1.20.1220.12
ID Description Score Start End GO Terms
AF-A0A819PHN1-F1-model_v4 malate synthase (EC 2.3.3.9) 1.001 81 197 GO:0004474
GO:0005737
GO:0006097
AF-A0A814EXI3-F1-model_v4 malate synthase (EC 2.3.3.9) 1.001 79 197 GO:0004474
GO:0005737
GO:0006097
AF-A0A7X5N3T9-F1-model_v4 Malate synthase A (EC 2.3.3.9) 1.001 79 170 GO:0004474
GO:0005737
GO:0006097
AF-A0A6I3LJK1-F1-model_v4 malate synthase (EC 2.3.3.9) 1.001 120 209 GO:0004474
GO:0005737
GO:0006097
AF-A0A0B1RQM0-F1-model_v4 malate synthase (EC 2.3.3.9) 1 100 234 GO:0004474
GO:0005737
GO:0006097

Map