F390655

General Info

Members Datasets Scaffolds Average Seq Length
291 214 582 143

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954002825|2954003772
Length 166
Sequence EDTVDDSVDQRAGETVDRRADRPTEGLWDAGAPGVLRLPSGRLVRGRGLRRPLDPTAPAPAYAVHLLGGPPPEVPWESRWLLWPDFRLPKDHVEARVVLAEVWERATEERVEVACGGGRGRTGTALACLAVLDGVPAEEAVAYVRAGYDRHAVETPWQRRYVRRFG

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
61 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
66 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
67 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
70 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
71 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
72 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
74 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
75 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
76 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
77 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
90 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
91 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
92 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
93 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
96 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
97 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
98 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
99 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
100 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
119 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
120 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
121 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
136 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
166 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
167 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
168 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
173 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
174 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
175 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
176 2558860280 Kutzneria sp. 744 Isolate Unclassified
177 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
178 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
179 2643221714 Streptomyces sp. Root264 Isolate Unclassified
180 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
181 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
182 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
183 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
184 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
185 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
186 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
187 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
188 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
189 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
190 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
191 2862574272 Streptomyces sp. AcE210 Isolate Nodule
192 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
193 2867428634 Streptomyces sp. RP5T Isolate Unclassified
194 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
195 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
196 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
197 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
198 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
199 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
200 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
201 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
202 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
203 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
204 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
205 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
206 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
207 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
208 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
209 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
210 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
211 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
212 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
213 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
214 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.91
Metatranscriptomes 0.34
Isolates 13.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.5
Nodule 0.34
Rhizoplane 0.69
Rhizosphere 78.35
Stem 0
Stem Tuber 0
Unclassified 1.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10098159 3300003203 Bacteria 876
2 JGI25406J46586_10145243 3300003203 Bacteria 693
3 rootH1_10049135 3300003316 Bacteria 2310
4 rootH2_10025983 3300003320 Bacteria 4907
5 rootH2_10026468 3300003320 Bacteria 1069
6 rootH2_10041815 3300003320 Bacteria 1992
7 rootL2_10030927 3300003322 Bacteria 5505
8 rootL2_10055668 3300003322 Bacteria 4990
9 rootL2_10078916 3300003322 Bacteria 5178
10 rootH1_10012707 3300003323 Bacteria 4991
11 rootH1_10049856 3300003323 Bacteria 3630
12 Ga0070683_100379163 3300005329 Bacteria 1348
13 Ga0070680_100744067 3300005336 Bacteria 844
14 Ga0070682_100265700 3300005337 Bacteria 1244
15 Ga0070709_10089067 3300005434 Bacteria 2031
16 Ga0070714_100328097 3300005435 Bacteria 1433
17 Ga0070714_100691863 3300005435 Bacteria 983
18 Ga0070714_101095942 3300005435 Bacteria 776
19 Ga0070713_100736492 3300005436 Bacteria 942
20 Ga0070710_10077825 3300005437 Bacteria 1928
21 Ga0070711_100087002 3300005439 Bacteria 2242
22 Ga0070711_100151227 3300005439 Bacteria 1750
23 Ga0070678_100022811 3300005456 Bacteria 4158
24 Ga0070681_10707674 3300005458 Bacteria 923
25 Ga0070699_101424939 3300005518 Bacteria 635
26 Ga0070679_100623473 3300005530 Bacteria 1022
27 Ga0070684_101084919 3300005535 Bacteria 752
28 Ga0068853_100349726 3300005539 Bacteria 1375
29 Ga0070665_100629070 3300005548 Bacteria 1086
30 Ga0070665_100698921 3300005548 Bacteria 1027
31 Ga0068857_100975989 3300005577 Bacteria 815
32 Ga0068856_100565216 3300005614 Bacteria 1158
33 Ga0068856_101782578 3300005614 Bacteria 627
34 Ga0068852_100216370 3300005616 Bacteria 1820
35 Ga0068852_100709632 3300005616 Bacteria 1016
36 Ga0081539_10005872 3300005985 Bacteria 12162
37 Ga0081539_10078202 3300005985 Bacteria 1747
38 Ga0070717_10232521 3300006028 Bacteria 1623
39 Ga0070717_10287077 3300006028 Unclassified 1460
40 Ga0070717_10580052 3300006028 Bacteria 1017
41 Ga0075363_100283722 3300006048 Bacteria 958
42 Ga0075364_10047990 3300006051 Bacteria 2782
43 Ga0075364_10063994 3300006051 Bacteria 2414
44 Ga0070712_100149009 3300006175 Bacteria 1794
45 Ga0070712_100190478 3300006175 Bacteria 1605
46 Ga0075362_10098931 3300006177 Bacteria 1362
47 Ga0075369_10044780 3300006186 Bacteria 1902
48 Ga0075369_10487450 3300006186 Bacteria 585
49 Ga0075434_101271943 3300006871 Bacteria 747
50 Ga0099795_10066639 3300007788 Bacteria 1349
51 Ga0105251_10418332 3300009011 Bacteria 618
52 Ga0105245_10021347 3300009098 Bacteria 5679
53 Ga0114129_10569692 3300009147 Bacteria 1471
54 Ga0105241_11672649 3300009174 Bacteria 618
55 Ga0105238_10979983 3300009551 Bacteria 866
56 Ga0105239_12042242 3300010375 Bacteria 666
57 Ga0105246_10496383 3300011119 Bacteria 1036
58 Ga0157369_10597512 3300013105 Bacteria 1139
59 Ga0213875_10151343 3300021388 Bacteria 1087
60 Ga0224712_10004103 3300022467 Bacteria 3890
61 Ga0209758_1023479 3300025297 Bacteria 2787
62 Ga0207692_10538108 3300025898 Bacteria 745
63 Ga0207699_10235337 3300025906 Bacteria 1256
64 Ga0207693_10044165 3300025915 Bacteria 3502
65 Ga0207663_10048419 3300025916 Bacteria 2631
66 Ga0207663_10223547 3300025916 Bacteria 1371
67 Ga0207700_10056884 3300025928 Bacteria 2946
68 Ga0207700_10197822 3300025928 Bacteria 1692
69 Ga0207664_10053565 3300025929 Bacteria 3194
70 Ga0207664_10235226 3300025929 Bacteria 1594
71 Ga0207664_10834189 3300025929 Bacteria 829
72 Ga0207644_10505177 3300025931 Bacteria 998
73 Ga0207661_10858316 3300025944 Bacteria 836
74 Ga0207679_10151355 3300025945 Bacteria 1889
75 Ga0207667_10053800 3300025949 Bacteria 4235
76 Ga0207639_10293179 3300026041 Bacteria 1435
77 Ga0207641_10550667 3300026088 Bacteria 1125
78 Ga0207674_10719987 3300026116 Bacteria 963
79 Ga0207683_10969418 3300026121 Bacteria 789
80 Ga0207698_10256924 3300026142 Bacteria 1602
81 Ga0207698_10993983 3300026142 Bacteria 849
82 Ga0307515_10014111 3300028794 Bacteria 14851
83 Ga0307511_10000218 3300030521 Bacteria 58158
84 Ga0307512_10019331 3300030522 Bacteria 6204
85 Ga0307512_10177624 3300030522 Bacteria 1204
86 Ga0307513_10003424 3300031456 Bacteria 21541
87 Ga0307513_10025938 3300031456 Bacteria 6769
88 Ga0307408_101548546 3300031548 Bacteria 628
89 Ga0307508_10316943 3300031616 Bacteria 1151
90 Ga0307514_10043525 3300031649 Bacteria 3525
91 Ga0307514_10093829 3300031649 Bacteria 2178
92 Ga0307406_10194377 3300031901 Bacteria 1488
93 Ga0307406_10267411 3300031901 Bacteria 1297
94 Ga0307412_10337341 3300031911 Bacteria 1205
95 Ga0307412_10807987 3300031911 Bacteria 815
96 Ga0307409_100438350 3300031995 Bacteria 1258
97 Ga0307409_100628662 3300031995 Bacteria 1065
98 Ga0373926_0002866 3300035083 Bacteria 5523
99 Ga0373926_0372439 3300035083 Bacteria 562
100 Ga0373934_0094466 3300035086 Unclassified 1207
101 Ga0373944_0003518 3300035089 Bacteria 4048
102 Ga0373936_0001555 3300035113 Bacteria 8355
103 Ga0373945_0001134 3300035116 Bacteria 8053
104 Ga0373954_0340771 3300035118 Bacteria 740
105 Ga0373943_0000367 3300035170 Bacteria 19154
106 Ga0373946_0001294 3300035171 Bacteria 8660
107 Ga0373924_0028093 3300035410 Bacteria 2240
108 Ga0373935_0006308 3300035692 Bacteria 7065
109 Ga0373927_0002431 3300035695 Bacteria 13585
110 Ga0373933_0214320 3300035724 Bacteria 1234
111 Ga0373947_0000506 3300035725 Bacteria 22626
112 Ga0373947_0953363 3300035725 Bacteria 585
113 Ga0373937_0222431 3300036401 Bacteria 1777
114 Ga0373925_0003854 3300037068 Bacteria 11487
115 Ga0395899_0627952 3300037312 Bacteria 681
116 Ga0395900_0062117 3300037418 Bacteria 3840
117 Ga0395898_0086118 3300037466 Bacteria 3029
118 Ga0436364_0052554 3300037853 Bacteria 7156
119 Ga0436364_0825018 3300037853 Bacteria 4457
120 Ga0436364_1036313 3300037853 Bacteria 1278
121 Ga0395901_0006714 3300038443 Bacteria 11630
122 Ga0395901_0031806 3300038443 Bacteria 5441
123 Ga0439436_0091457 3300041404 Bacteria 847
124 Ga0439438_026479 3300041405 Bacteria 1572
125 Ga0439439_0099124 3300041406 Bacteria 801
126 Ga0439465_0035181 3300041413 Bacteria 1605
127 Ga0439465_0248126 3300041413 Bacteria 658
128 Ga0451837_0099711 3300041494 Bacteria 656
129 Ga0451841_0667556 3300041498 Bacteria 502
130 Ga0451841_1359591 3300041498 Bacteria 522
131 Ga0439433_0000060 3300041999 Bacteria 13464
132 Ga0439433_0011548 3300041999 Bacteria 1935
133 Ga0439442_005302 3300042002 Bacteria 2584
134 Ga0439442_033653 3300042002 Bacteria 1071
135 Ga0439449_0001477 3300042007 Bacteria 9211
136 Ga0439449_0032216 3300042007 Bacteria 1954
137 Ga0439449_0033614 3300042007 Bacteria 1909
138 Ga0439457_014763 3300042014 Bacteria 1745
139 Ga0439462_0001583 3300042015 Bacteria 5108
140 Ga0439434_0021413 3300042435 Bacteria 1942
141 Ga0466972_0391814 3300044658 Bacteria 651
142 Ga0466965_0002367 3300044683 Bacteria 7984
143 Ga0466965_0007463 3300044683 Bacteria 5022
144 Ga0466965_0184846 3300044683 Bacteria 1101
145 Ga0466965_0964739 3300044683 Bacteria 500
146 Ga0466966_0055608 3300044684 Bacteria 2504
147 Ga0466966_0226121 3300044684 Bacteria 1129
148 Ga0466961_0000784 3300044693 Bacteria 19942
149 Ga0466961_0115609 3300044693 Bacteria 1686
150 Ga0466963_0000418 3300044694 Bacteria 19528
151 Ga0466963_0080335 3300044694 Bacteria 2207
152 Ga0466963_0152144 3300044694 Bacteria 1607
153 Ga0466964_0447287 3300044706 Bacteria 684
154 Ga0466971_0005143 3300044719 Bacteria 5665
155 Ga0466970_0159310 3300044765 Bacteria 1248
156 Ga0466957_0165462 3300044842 Bacteria 1438
157 Ga0466959_0036548 3300045049 Bacteria 3630
158 Ga0466959_0081295 3300045049 Bacteria 2335
159 Ga0466959_0122686 3300045049 Bacteria 1845
160 Ga0466958_0000470 3300045836 Bacteria 16829
161 Ga0466958_0557484 3300045836 Bacteria 745
162 Ga0466967_0006089 3300045976 Bacteria 8484
163 Ga0466967_0043225 3300045976 Bacteria 3900
164 Ga0466967_0062459 3300045976 Bacteria 3306
165 Ga0466967_0278652 3300045976 Bacteria 1604
166 Ga0466967_0565296 3300045976 Bacteria 1120
167 Ga0466967_1186118 3300045976 Bacteria 761
168 Ga0495629_0087594 3300046459 Bacteria 2173
169 Ga0495638_0448040 3300046460 Bacteria 660
170 Ga0495641_0014032 3300046461 Bacteria 4359
171 Ga0495651_0953492 3300046462 Bacteria 522
172 Ga0495653_0107045 3300046463 Bacteria 2015
173 Ga0495582_0020763 3300046473 Bacteria 3597
174 Ga0495639_0320085 3300046475 Bacteria 776
175 Ga0495662_0003174 3300046476 Bacteria 8300
176 Ga0495664_0001930 3300046477 Bacteria 11041
177 Ga0495664_0155724 3300046477 Bacteria 1386
178 Ga0495608_0073164 3300046511 Bacteria 2235
179 Ga0495608_0099171 3300046511 Bacteria 1879
180 Ga0495608_0386419 3300046511 Bacteria 857
181 Ga0495618_0146869 3300046514 Bacteria 1507
182 Ga0495630_0007448 3300046517 Bacteria 7822
183 Ga0495652_0168748 3300046529 Bacteria 1691
184 Ga0495665_0022532 3300046531 Bacteria 3386
185 Ga0495587_0153465 3300046536 Unclassified 1312
186 Ga0495645_0239645 3300046543 Bacteria 1211
187 Ga0495634_0020777 3300046642 Bacteria 4651
188 Ga0495611_0133981 3300046648 Bacteria 1156
189 Ga0495635_0000202 3300046663 Bacteria 37653
190 Ga0495657_0080940 3300046675 Bacteria 2101
191 Ga0495623_0191410 3300046679 Bacteria 1181
192 Ga0495646_0282155 3300046680 Bacteria 882
193 Ga0495624_0018575 3300046690 Bacteria 4649
194 Ga0495589_0318740 3300046794 Bacteria 718
195 Ga0495581_0016056 3300047315 Bacteria 4353
196 Ga0495604_0005045 3300047317 Bacteria 10448
197 Ga0495674_0003897 3300047319 Bacteria 14487
198 Ga0495676_0000348 3300047321 Bacteria 37744
199 Ga0495680_0082171 3300047322 Bacteria 2431
200 Ga0495683_0061420 3300047323 Bacteria 1861
201 Ga0495675_0118997 3300047444 Bacteria 1645
202 Ga0495675_0692893 3300047444 Bacteria 571
203 Ga0495685_009975 3300047447 Bacteria 3180
204 Ga0495684_0001849 3300047471 Bacteria 16993
205 Ga0495593_0026966 3300047673 Bacteria 3166
206 Ga0496110_0021991 3300048913 Bacteria 5410
207 Ga0496114_0611053 3300048917 Bacteria 961
208 Ga0496125_0010174 3300048928 Bacteria 9534
209 Ga0501031_0322851 3300049568 Bacteria 1000
210 Ga0501031_0895247 3300049568 Bacteria 568
211 Ga0501032_0081922 3300049569 Bacteria 2147
212 Ga0501032_0110800 3300049569 Bacteria 1816
213 Ga0501033_0046771 3300049570 Bacteria 3217
214 Ga0501033_0406197 3300049570 Bacteria 949
215 Ga0501034_0651489 3300049571 Bacteria 955
216 Ga0501034_0988195 3300049571 Bacteria 726
217 Ga0501036_0197645 3300049572 Bacteria 1692
218 Ga0501036_0556485 3300049572 Bacteria 953
219 Ga0501038_0000407 3300049574 Bacteria 37327
220 Ga0501038_0057006 3300049574 Bacteria 3355
221 Ga0501038_0109907 3300049574 Bacteria 2284
222 Ga0501038_0401009 3300049574 Bacteria 1061
223 Ga0501038_1256498 3300049574 Bacteria 536
224 Ga0501039_0107033 3300049575 Bacteria 2184
225 Ga0501039_1282270 3300049575 Bacteria 565
226 Ga0501043_0041727 3300049579 Bacteria 3605
227 Ga0501046_0774103 3300049580 Bacteria 673
228 Ga0501047_0020669 3300049581 Bacteria 6320
229 Ga0501047_0314520 3300049581 Bacteria 1406
230 Ga0501047_0374559 3300049581 Bacteria 1258
231 Ga0501068_1140726 3300049584 Bacteria 516
232 Ga0501074_0214745 3300049590 Bacteria 1370
233 Ga0501035_0003687 3300049822 Bacteria 14597
234 Ga0501044_0003112 3300049823 Bacteria 18799
235 Ga0501044_0120315 3300049823 Bacteria 2627
236 Ga0501044_0601725 3300049823 Bacteria 992
237 Ga0501045_0038217 3300049824 Bacteria 3491
238 nmdc:mga03683_155829_c1 3300050489 Bacteria 1033
239 nmdc:mga03n38_430197_c1 3300050490 Bacteria 731
240 nmdc:mga03n38_457738_c1 3300050490 Bacteria 711
241 nmdc:mga00v17_17101_c1 3300050491 Bacteria 4097
242 nmdc:mga00v17_43471_c1 3300050491 Bacteria 2706
243 nmdc:mga0yw44_278991_c1 3300050492 Bacteria 1117
244 nmdc:mga0yw44_491989_c1 3300050492 Bacteria 832
245 nmdc:mga05p37_617126_c1 3300050507 Bacteria 1221
246 nmdc:mga0n895_1163854_c1 3300050512 Bacteria 746
247 Ga0495619_0424616 3300053085 Bacteria 917
248 Ga0500622_0414037 3300053156 Bacteria 544
249 Ga0500624_060232 3300053157 Bacteria 724
250 Ga0466962_0125465 3300061719 Bacteria 1240
251 Ga0466962_0452763 3300061719 Bacteria 646
252 2954003772 2954002825 Bacteria 9173742
253 2559432869 2558860280 Bacteria 11429938
254 2566993555 2565956761 Bacteria 6601618
255 2585304943 2582581313 Bacteria 10042643
256 2644625860 2643221714 Bacteria 9015452
257 2645721045 2643221961 Bacteria 3919167
258 2738888098 2738541308 Bacteria 7020677
259 2776376848 2775506925 Bacteria 7237746
260 2785344373 2784746763 Bacteria 9783172
261 2799182873 2799112218 Bacteria 4315149
262 2808919683 2808606375 Bacteria 9466072
263 2811844361 2808606982 Bacteria 7791042
264 2812334003 2811994874 Bacteria 5367947
265 2812359087 2811994879 Bacteria 9313447
266 2852641180 2852635781 Bacteria 8251373
267 2862184155 2862178590 Bacteria 8583590
268 2862574918 2862574272 Bacteria 10567477
269 2863071165 2863067949 Bacteria 8541735
270 2867430142 2867428634 Bacteria 9590268
271 2877682055 2877676314 Bacteria 9512378
272 2884693965 2884693830 Bacteria 11273186
273 2887486760 2887478801 Bacteria 8972725
274 2889302033 2889300758 Bacteria 5690814
275 2895448200 2895442618 Bacteria 11027144
276 2904540091 2904535858 Bacteria 6308016
277 2946075125 2946072368 Bacteria 8999607
278 2954704200 2954701450 Bacteria 10834262
279 2954717123 2954711539 Bacteria 10867210
280 2954727091 2954721474 Bacteria 10456478
281 2954734710 2954731030 Bacteria 10243860
282 2954745996 2954740390 Bacteria 10229294
283 2954753597 2954749733 Bacteria 10366972
284 2954764966 2954759201 Bacteria 9358192
285 2990091446 2990088156 Bacteria 6657676
286 2997455803 2997451912 Bacteria 8492419
287 3006396288 3006393351 Bacteria 6615579
288 8048408487 8048406513 Bacteria 8936924
289 8054162758 8054160619 Bacteria 7783213
290 8056062785 8056060235 Bacteria 7259403
291 8056450472 8056447290 Bacteria 7680491
292 JGI25406J46586_10098159
293 JGI25406J46586_10145243
294 rootH1_10049135
295 rootH2_10025983
296 rootH2_10026468
297 rootH2_10041815
298 rootL2_10030927
299 rootL2_10055668
300 rootL2_10078916
301 rootH1_10012707
302 rootH1_10049856
303 Ga0070683_100379163
304 Ga0070680_100744067
305 Ga0070682_100265700
306 Ga0070709_10089067
307 Ga0070714_100328097
308 Ga0070714_100691863
309 Ga0070714_101095942
310 Ga0070713_100736492
311 Ga0070710_10077825
312 Ga0070711_100087002
313 Ga0070711_100151227
314 Ga0070678_100022811
315 Ga0070681_10707674
316 Ga0070699_101424939
317 Ga0070679_100623473
318 Ga0070684_101084919
319 Ga0068853_100349726
320 Ga0070665_100629070
321 Ga0070665_100698921
322 Ga0068857_100975989
323 Ga0068856_100565216
324 Ga0068856_101782578
325 Ga0068852_100216370
326 Ga0068852_100709632
327 Ga0081539_10005872
328 Ga0081539_10078202
329 Ga0070717_10232521
330 Ga0070717_10287077
331 Ga0070717_10580052
332 Ga0075363_100283722
333 Ga0075364_10047990
334 Ga0075364_10063994
335 Ga0070712_100149009
336 Ga0070712_100190478
337 Ga0075362_10098931
338 Ga0075369_10044780
339 Ga0075369_10487450
340 Ga0075434_101271943
341 Ga0099795_10066639
342 Ga0105251_10418332
343 Ga0105245_10021347
344 Ga0114129_10569692
345 Ga0105241_11672649
346 Ga0105238_10979983
347 Ga0105239_12042242
348 Ga0105246_10496383
349 Ga0157369_10597512
350 Ga0213875_10151343
351 Ga0224712_10004103
352 Ga0209758_1023479
353 Ga0207692_10538108
354 Ga0207699_10235337
355 Ga0207693_10044165
356 Ga0207663_10048419
357 Ga0207663_10223547
358 Ga0207700_10056884
359 Ga0207700_10197822
360 Ga0207664_10053565
361 Ga0207664_10235226
362 Ga0207664_10834189
363 Ga0207644_10505177
364 Ga0207661_10858316
365 Ga0207679_10151355
366 Ga0207667_10053800
367 Ga0207639_10293179
368 Ga0207641_10550667
369 Ga0207674_10719987
370 Ga0207683_10969418
371 Ga0207698_10256924
372 Ga0207698_10993983
373 Ga0307515_10014111
374 Ga0307511_10000218
375 Ga0307512_10019331
376 Ga0307512_10177624
377 Ga0307513_10003424
378 Ga0307513_10025938
379 Ga0307408_101548546
380 Ga0307508_10316943
381 Ga0307514_10043525
382 Ga0307514_10093829
383 Ga0307406_10194377
384 Ga0307406_10267411
385 Ga0307412_10337341
386 Ga0307412_10807987
387 Ga0307409_100438350
388 Ga0307409_100628662
389 Ga0373926_0002866
390 Ga0373926_0372439
391 Ga0373934_0094466
392 Ga0373944_0003518
393 Ga0373936_0001555
394 Ga0373945_0001134
395 Ga0373954_0340771
396 Ga0373943_0000367
397 Ga0373946_0001294
398 Ga0373924_0028093
399 Ga0373935_0006308
400 Ga0373927_0002431
401 Ga0373933_0214320
402 Ga0373947_0000506
403 Ga0373947_0953363
404 Ga0373937_0222431
405 Ga0373925_0003854
406 Ga0395899_0627952
407 Ga0395900_0062117
408 Ga0395898_0086118
409 Ga0436364_0052554
410 Ga0436364_0825018
411 Ga0436364_1036313
412 Ga0395901_0006714
413 Ga0395901_0031806
414 Ga0439436_0091457
415 Ga0439438_026479
416 Ga0439439_0099124
417 Ga0439465_0035181
418 Ga0439465_0248126
419 Ga0451837_0099711
420 Ga0451841_0667556
421 Ga0451841_1359591
422 Ga0439433_0000060
423 Ga0439433_0011548
424 Ga0439442_005302
425 Ga0439442_033653
426 Ga0439449_0001477
427 Ga0439449_0032216
428 Ga0439449_0033614
429 Ga0439457_014763
430 Ga0439462_0001583
431 Ga0439434_0021413
432 Ga0466972_0391814
433 Ga0466965_0002367
434 Ga0466965_0007463
435 Ga0466965_0184846
436 Ga0466965_0964739
437 Ga0466966_0055608
438 Ga0466966_0226121
439 Ga0466961_0000784
440 Ga0466961_0115609
441 Ga0466963_0000418
442 Ga0466963_0080335
443 Ga0466963_0152144
444 Ga0466964_0447287
445 Ga0466971_0005143
446 Ga0466970_0159310
447 Ga0466957_0165462
448 Ga0466959_0036548
449 Ga0466959_0081295
450 Ga0466959_0122686
451 Ga0466958_0000470
452 Ga0466958_0557484
453 Ga0466967_0006089
454 Ga0466967_0043225
455 Ga0466967_0062459
456 Ga0466967_0278652
457 Ga0466967_0565296
458 Ga0466967_1186118
459 Ga0495629_0087594
460 Ga0495638_0448040
461 Ga0495641_0014032
462 Ga0495651_0953492
463 Ga0495653_0107045
464 Ga0495582_0020763
465 Ga0495639_0320085
466 Ga0495662_0003174
467 Ga0495664_0001930
468 Ga0495664_0155724
469 Ga0495608_0073164
470 Ga0495608_0099171
471 Ga0495608_0386419
472 Ga0495618_0146869
473 Ga0495630_0007448
474 Ga0495652_0168748
475 Ga0495665_0022532
476 Ga0495587_0153465
477 Ga0495645_0239645
478 Ga0495634_0020777
479 Ga0495611_0133981
480 Ga0495635_0000202
481 Ga0495657_0080940
482 Ga0495623_0191410
483 Ga0495646_0282155
484 Ga0495624_0018575
485 Ga0495589_0318740
486 Ga0495581_0016056
487 Ga0495604_0005045
488 Ga0495674_0003897
489 Ga0495676_0000348
490 Ga0495680_0082171
491 Ga0495683_0061420
492 Ga0495675_0118997
493 Ga0495675_0692893
494 Ga0495685_009975
495 Ga0495684_0001849
496 Ga0495593_0026966
497 Ga0496110_0021991
498 Ga0496114_0611053
499 Ga0496125_0010174
500 Ga0501031_0322851
501 Ga0501031_0895247
502 Ga0501032_0081922
503 Ga0501032_0110800
504 Ga0501033_0046771
505 Ga0501033_0406197
506 Ga0501034_0651489
507 Ga0501034_0988195
508 Ga0501036_0197645
509 Ga0501036_0556485
510 Ga0501038_0000407
511 Ga0501038_0057006
512 Ga0501038_0109907
513 Ga0501038_0401009
514 Ga0501038_1256498
515 Ga0501039_0107033
516 Ga0501039_1282270
517 Ga0501043_0041727
518 Ga0501046_0774103
519 Ga0501047_0020669
520 Ga0501047_0314520
521 Ga0501047_0374559
522 Ga0501068_1140726
523 Ga0501074_0214745
524 Ga0501035_0003687
525 Ga0501044_0003112
526 Ga0501044_0120315
527 Ga0501044_0601725
528 Ga0501045_0038217
529 nmdc:mga03683_155829_c1
530 nmdc:mga03n38_430197_c1
531 nmdc:mga03n38_457738_c1
532 nmdc:mga00v17_17101_c1
533 nmdc:mga00v17_43471_c1
534 nmdc:mga0yw44_278991_c1
535 nmdc:mga0yw44_491989_c1
536 nmdc:mga05p37_617126_c1
537 nmdc:mga0n895_1163854_c1
538 Ga0495619_0424616
539 Ga0500622_0414037
540 Ga0500624_060232
541 Ga0466962_0125465
542 Ga0466962_0452763
543 2954003772
544 2559432869
545 2566993555
546 2585304943
547 2644625860
548 2645721045
549 2738888098
550 2776376848
551 2785344373
552 2799182873
553 2808919683
554 2811844361
555 2812334003
556 2812359087
557 2852641180
558 2862184155
559 2862574918
560 2863071165
561 2867430142
562 2877682055
563 2884693965
564 2887486760
565 2889302033
566 2895448200
567 2904540091
568 2946075125
569 2954704200
570 2954717123
571 2954727091
572 2954734710
573 2954745996
574 2954753597
575 2954764966
576 2990091446
577 2997455803
578 3006396288
579 8048408487
580 8054162758
581 8056062785
582 8056450472

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22784

PTP-SAK

Swiss Army Knife protein, DSP-PTPase phosphatase domain

85

162

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5y16-assembly1.cif.gz_B crystal structure of human dusp28(y102h) 0.8595 45 130
5y15-assembly1.cif.gz_B crystal structure of human dusp28 0.8458 45 130
1fpz-assembly3.cif.gz_C crystal structure analysis of kinase associated phosphatase (kap) with a substitution of the catalytic site cysteine (cys140) to a serine 0.8443 59 130
4jnb-assembly1.cif.gz_A crystal structure of the catalytic domain of human dusp12 0.8432 45 130
2oud-assembly1.cif.gz_A crystal structure of the catalytic domain of human mkp5 0.8425 46 130
ID Description Score Start End Superfamily
5z5aA00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.8564 45 130 3.90.190.10
af_Q17787_199_476_3.90.190.10 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.846 60 116 3.90.190.10
5y15B00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.8458 45 130 3.90.190.10
1fpzC00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.8443 59 130 3.90.190.10
2oudA00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.8425 46 130 3.90.190.10
ID Description Score Start End GO Terms
AF-A0A554R856-F1-model_v4 Protein phosphatase 0.9943 21 130
AF-A0A4Q7WAF3-F1-model_v4 deleted 0.9925 21 130
AF-A0A1H3GQ55-F1-model_v4 Protein-tyrosine phosphatase 0.9918 19 131
AF-A0A0M4D6F5-F1-model_v4 Protein phosphatase 0.9903 21 130
AF-A0A1C4WR28-F1-model_v4 Protein phosphatase 0.9882 14 131

Map