F390654

General Info

Members Datasets Scaffolds Average Seq Length
291 197 241 644

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2945972063|2945974362
Length 658
Sequence AAAATAATAPHEANAHANQFALLKQRRFAPFFWTQFAGAANDNLFKFAFTVMVTYQLQLSWMPPAMAGLAIGALFILPFLLFSATAGQLTDKFDKTKMIRFVKNLEIAIMLLAAWGFVRADAVVLLGCVFLMGLHSTLFGPVKFAYLPQVLDARELTGGNGMVEMGTFVAILLGQVAGGLLVALPQIGHATVAVACVLLALVGRGVAQAIPQAPATDPGLVINWNPFSETWRNLKLAHGNIVVFRSLLGISWMWFFGAVFLSQFPSFAKEVLHGDEQVASLLLVVFSVGIGVGSLLCETLSRRQVEIGLVPLGAIGMSVFAIDLYFASRGLPPAPAAAGALASSAVMGLGAFMGQAAHWRVMADLALLSLFAGLYSVPMYALIQLRSQPTHRARIIAANNILNALFMIGSSVIAGALLGAGFTIPQIFLFTGIANAVVAFYIFMLVPEYLLRFIAWMLSHFVYRFEIKGDEHIPTEGAAVLVCNHVSFIDAILLMAASPRPIRFIMDHRIFKVPVLGGLFRLAKAIPIAPQKEDPAAYEAAFAKALGVLREGDLLAIFPEGAITRDGQLQPFKGGVMKIIESARAEGIEPPVIPMALTNLWGSYFSRIELRGGENVAMAKPFRRGFFSRVGLNVGHAVPPVEVRPEALQQRVSGLLAA

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2547132374 Acidovorax radicis N35 Isolate Unclassified
3 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
4 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
5 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
6 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
7 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
8 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
9 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
10 2643221570 Acidovorax sp. Root568 Isolate Unclassified
11 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
12 2643221596 Acidovorax sp. Root70 Isolate Unclassified
13 2643221609 Acidovorax sp. Root217 Isolate Unclassified
14 2643221611 Acidovorax sp. Root219 Isolate Unclassified
15 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
16 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
17 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
18 2643221652 Acidovorax sp. Root402 Isolate Unclassified
19 2643221658 Variovorax sp. Root411 Isolate Unclassified
20 2643221672 Variovorax sp. Root434 Isolate Unclassified
21 2643221717 Acidovorax sp. Root267 Isolate Unclassified
22 2721755523 Delftia sp. HK171 Isolate Unclassified
23 2738541277 Variovorax sp. GV051 Isolate Unclassified
24 2738541307 Variovorax sp. GV008 Isolate Unclassified
25 2738543012 Acidovorax sp. CF301 Isolate Unclassified
26 2738543019 Variovorax sp. GV040 Isolate Unclassified
27 2816332133 Acidovorax radicis 2721A Isolate Unclassified
28 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
29 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
30 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
31 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
32 2842733646 Variovorax sp. R-72446 Isolate Unclassified
33 2842747753 Variovorax sp. R-72060 Isolate Unclassified
34 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
35 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
36 2904456579 Variovorax sp. 2002 Isolate Unclassified
37 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
38 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
39 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
40 2928070936 Variovorax gossypii 1167 Isolate Unclassified
41 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
42 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
43 2929520902 Variovorax beijingensis 502 Isolate Unclassified
44 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
45 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
46 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
47 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
48 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
49 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
50 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
51 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
52 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
53 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
54 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
55 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
56 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
57 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
58 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
59 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
60 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
61 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
62 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
63 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
64 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
65 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
66 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
67 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
68 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
69 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
70 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
71 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
72 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
73 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
74 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
75 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
76 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
77 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
78 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
79 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
80 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
81 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
82 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
83 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
84 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
85 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
86 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
87 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
88 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
89 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
90 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
91 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
92 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
93 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
94 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
95 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
96 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
97 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
98 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
99 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
100 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
101 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
102 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
103 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
104 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
105 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
107 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
108 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
109 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
110 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
111 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
113 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
117 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
118 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
119 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
121 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
122 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
145 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
146 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
148 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
151 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
152 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
153 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
154 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
155 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
156 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
157 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
158 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
159 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
160 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
161 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
162 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
163 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
164 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
165 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
166 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
167 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
168 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
169 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
170 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
171 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
172 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
173 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
174 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
175 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
176 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
177 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
178 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
179 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
180 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
181 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
182 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
183 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
184 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
185 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
186 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
187 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
188 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
189 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
190 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
191 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
192 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
193 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
194 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
195 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.82
Metatranscriptomes 0
Isolates 17.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 38.49
Nodule 1.72
Rhizoplane 1.72
Rhizosphere 40.89
Stem 0
Stem Tuber 0
Unclassified 17.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10003416 3300001989 Bacteria 6059
2 JGI25155J39150_1000139 3300002704 Bacteria 34384
3 JGI25156J39149_1000280 3300002705 Bacteria 34414
4 JGI25154J39366_1000251 3300002738 Bacteria 34441
5 JGI25157J39369_1000320 3300002741 Bacteria 34405
6 JGI25152J39213_1003483 3300002773 Bacteria 5348
7 JGI25150J39212_1003322 3300002774 Bacteria 3787
8 JGI25159J45721_1000602 3300002987 Bacteria 16084
9 JGI25159J45721_1000994 3300002987 Bacteria 12264
10 JGI25159J45721_1006550 3300002987 Bacteria 3469
11 JGI25151J46595_10002705 3300003187 Bacteria 10349
12 JGI25153J46596_10001814 3300003215 Bacteria 12654
13 JGI25153J46596_10002396 3300003215 Bacteria 10824
14 JGI25160J50197_1000268 3300003354 Bacteria 39073
15 JGI25160J50197_1007111 3300003354 Bacteria 4417
16 JGI25161J50226_1000036 3300003374 Bacteria 133407
17 Ga0055525_1000036 3300003759 Bacteria 298878
18 Ga0055526_1001659 3300003771 Bacteria 15626
19 Ga0055537_1000075 3300003773 Bacteria 70912
20 Ga0055537_1000663 3300003773 Bacteria 18109
21 Ga0055537_1000875 3300003773 Bacteria 14386
22 Ga0055524_1000098 3300003775 Bacteria 108095
23 Ga0055534_1000346 3300003784 Bacteria 29725
24 Ga0055528_1000255 3300003790 Bacteria 45167
25 Ga0055530_10000228 3300003791 Bacteria 50142
26 Ga0055540_1000203 3300003792 Bacteria 57592
27 Ga0055540_1000361 3300003792 Bacteria 38460
28 Ga0055540_1000765 3300003792 Bacteria 21856
29 Ga0055540_1010395 3300003792 Bacteria 3104
30 Ga0055531_10000974 3300003794 Bacteria 22817
31 Ga0055531_10006016 3300003794 Bacteria 6965
32 Ga0055543_1000746 3300004625 Bacteria 16371
33 Ga0065165_1001632 3300005262 Bacteria 22838
34 Ga0065165_1004369 3300005262 Bacteria 8838
35 Ga0065165_1008117 3300005262 Bacteria 4997
36 Ga0065704_10080776 3300005289 Bacteria 3882
37 Ga0070676_10005406 3300005328 Bacteria 6805
38 Ga0070676_10006159 3300005328 Bacteria 6405
39 Ga0070670_100003574 3300005331 Bacteria 12936
40 Ga0070670_100031023 3300005331 Bacteria 4603
41 Ga0070670_100042350 3300005331 Bacteria 3914
42 Ga0068869_100018435 3300005334 Bacteria 4752
43 Ga0070675_100003127 3300005354 Bacteria 12520
44 Ga0070671_100038200 3300005355 Bacteria 3985
45 Ga0070671_100116800 3300005355 Bacteria 2243
46 Ga0070674_100002376 3300005356 Bacteria 10400
47 Ga0070674_100003973 3300005356 Bacteria 8376
48 Ga0070674_100074190 3300005356 Bacteria 2414
49 Ga0070673_100011974 3300005364 Bacteria 5940
50 Ga0070673_100054276 3300005364 Bacteria 3152
51 Ga0070667_100003068 3300005367 Bacteria 14359
52 Ga0070663_100001147 3300005455 Bacteria 14603
53 Ga0068867_100002171 3300005459 Bacteria 13775
54 Ga0068867_100096638 3300005459 Bacteria 2249
55 Ga0068867_100101250 3300005459 Bacteria 2200
56 Ga0070706_100029071 3300005467 Bacteria 5091
57 Ga0070679_100038594 3300005530 Bacteria 4748
58 Ga0070672_100002012 3300005543 Bacteria 12778
59 Ga0068857_100010775 3300005577 Bacteria 7957
60 Ga0075365_10023889 3300006038 Bacteria 3850
61 Ga0075365_10085511 3300006038 Bacteria 2142
62 Ga0075363_100006348 3300006048 Bacteria 5357
63 Ga0075363_100047571 3300006048 Bacteria 2278
64 Ga0075364_10013225 3300006051 Bacteria 5066
65 Ga0075362_10016789 3300006177 Bacteria 3004
66 Ga0075367_10047099 3300006178 Bacteria 2536
67 Ga0075366_10003188 3300006195 Bacteria 8600
68 Ga0075366_10016949 3300006195 Bacteria 4188
69 Ga0075366_10020086 3300006195 Bacteria 3873
70 Ga0075370_10002017 3300006353 Bacteria 9206
71 Ga0075370_10014376 3300006353 Bacteria 4221
72 Ga0075370_10020263 3300006353 Bacteria 3633
73 Ga0075370_10035747 3300006353 Bacteria 2789
74 Ga0075370_10059346 3300006353 Bacteria 2177
75 Ga0079104_1000451 3300006946 Bacteria 46572
76 Ga0105250_10000318 3300009092 Bacteria 37328
77 Ga0105243_10003456 3300009148 Bacteria 12770
78 Ga0105242_10005023 3300009176 Bacteria 10220
79 Ga0157373_10076800 3300013100 Bacteria 2357
80 Ga0163162_10032803 3300013306 Bacteria 5157
81 Ga0163162_10045873 3300013306 Bacteria 4380
82 Ga0182008_10000620 3300014497 Bacteria 26066
83 Ga0182008_10009243 3300014497 Bacteria 5328
84 Ga0182008_10027940 3300014497 Bacteria 2854
85 Ga0163161_10000361 3300017792 Bacteria 38156
86 Ga0163161_10003567 3300017792 Bacteria 10898
87 Ga0163161_10064754 3300017792 Bacteria 2667
88 Ga0209435_100002 3300025206 Bacteria 794178
89 Ga0209563_100014 3300025230 Bacteria 940582
90 Ga0207425_1000446 3300025245 Bacteria 27025
91 Ga0207425_1002023 3300025245 Bacteria 7558
92 Ga0209646_1000001 3300025246 Bacteria 3092932
93 Ga0209026_1000121 3300025250 Bacteria 126801
94 Ga0209759_1000001 3300025256 Bacteria 2799452
95 Ga0209129_1000212 3300025258 Bacteria 67061
96 Ga0209129_1001889 3300025258 Bacteria 11067
97 Ga0209129_1005591 3300025258 Bacteria 4380
98 Ga0209565_1000026 3300025263 Bacteria 365910
99 Ga0209565_1000259 3300025263 Bacteria 56285
100 Ga0209565_1000539 3300025263 Bacteria 26430
101 Ga0209565_1001271 3300025263 Bacteria 11704
102 Ga0209673_1000009 3300025273 Bacteria 620735
103 Ga0209673_1000193 3300025273 Bacteria 123134
104 Ga0209673_1001714 3300025273 Bacteria 18537
105 Ga0209673_1002564 3300025273 Bacteria 12361
106 Ga0209130_1000109 3300025284 Bacteria 133520
107 Ga0209130_1000347 3300025284 Bacteria 53284
108 Ga0209675_1000220 3300025291 Bacteria 59335
109 Ga0209675_1000246 3300025291 Bacteria 53700
110 Ga0209675_1001907 3300025291 Bacteria 11255
111 Ga0209675_1003151 3300025291 Bacteria 8016
112 Ga0209676_1000013 3300025292 Bacteria 816080
113 Ga0209676_1000074 3300025292 Bacteria 305770
114 Ga0209676_1004472 3300025292 Bacteria 7763
115 Ga0209025_1000283 3300025294 Bacteria 114855
116 Ga0209025_1001101 3300025294 Bacteria 38908
117 Ga0209025_1003290 3300025294 Bacteria 15555
118 Ga0209025_1003444 3300025294 Bacteria 14976
119 Ga0209025_1003831 3300025294 Bacteria 13704
120 Ga0209025_1006548 3300025294 Bacteria 8989
121 Ga0209025_1009712 3300025294 Bacteria 6651
122 Ga0209564_1000024 3300025295 Bacteria 535041
123 Ga0209564_1000243 3300025295 Bacteria 118066
124 Ga0209564_1000885 3300025295 Bacteria 39532
125 Ga0209564_1001279 3300025295 Bacteria 27663
126 Ga0209564_1001393 3300025295 Bacteria 25201
127 Ga0209758_1000194 3300025297 Bacteria 134196
128 Ga0209758_1000220 3300025297 Bacteria 123972
129 Ga0209050_1000008 3300025298 Bacteria 1144179
130 Ga0209050_1000015 3300025298 Bacteria 759102
131 Ga0209050_1000614 3300025298 Bacteria 56080
132 Ga0209050_1004783 3300025298 Bacteria 8928
133 Ga0209050_1007053 3300025298 Bacteria 6446
134 Ga0209256_1000003 3300025299 Bacteria 1661127
135 Ga0209256_1000304 3300025299 Bacteria 85971
136 Ga0207426_1000130 3300025302 Bacteria 210271
137 Ga0207426_1001362 3300025302 Bacteria 20714
138 Ga0207426_1001685 3300025302 Bacteria 17081
139 Ga0209051_1000005 3300025303 Bacteria 1142353
140 Ga0209051_1000010 3300025303 Bacteria 641298
141 Ga0209051_1000306 3300025303 Bacteria 77135
142 Ga0209051_1001349 3300025303 Bacteria 21311
143 Ga0209257_1000015 3300025304 Bacteria 908141
144 Ga0209257_1000026 3300025304 Bacteria 723225
145 Ga0209257_1000048 3300025304 Bacteria 455536
146 Ga0209257_1000108 3300025304 Bacteria 240229
147 Ga0207697_10007764 3300025315 Bacteria 4753
148 Ga0207696_1001054 3300025711 Bacteria 16322
149 Ga0207645_10001955 3300025907 Bacteria 16583
150 Ga0207645_10012998 3300025907 Bacteria 5628
151 Ga0207684_10015847 3300025910 Bacteria 6480
152 Ga0207681_10032736 3300025923 Bacteria 3405
153 Ga0207650_10001283 3300025925 Bacteria 18214
154 Ga0207650_10009843 3300025925 Bacteria 6539
155 Ga0207650_10036601 3300025925 Bacteria 3571
156 Ga0207659_10013780 3300025926 Bacteria 5194
157 Ga0207644_10026812 3300025931 Bacteria 3976
158 Ga0207644_10070710 3300025931 Bacteria 2551
159 Ga0207686_10003576 3300025934 Bacteria 8343
160 Ga0207709_10000152 3300025935 Bacteria 93738
161 Ga0207669_10021077 3300025937 Bacteria 3432
162 Ga0207691_10018449 3300025940 Bacteria 6612
163 Ga0207689_10055485 3300025942 Bacteria 3261
164 Ga0207651_10006503 3300025960 Bacteria 6129
165 Ga0207640_10065341 3300025981 Bacteria 2427
166 Ga0207658_10013093 3300025986 Bacteria 5665
167 Ga0207678_10001140 3300026067 Bacteria 24366
168 Ga0207648_10003354 3300026089 Bacteria 16835
169 Ga0207648_10007195 3300026089 Bacteria 10972
170 Ga0207648_10027146 3300026089 Bacteria 5084
171 Ga0207674_10061189 3300026116 Bacteria 3805
172 Ga0207683_10007168 3300026121 Bacteria 9557
173 Ga0209281_1000072 3300027111 Bacteria 273114
174 Ga0209968_1000289 3300027526 Bacteria 8608
175 Ga0209970_1001832 3300027614 Bacteria 3679
176 Ga0209282_1000320 3300027666 Bacteria 23676
177 Ga0209966_1000046 3300027695 Bacteria 52323
178 Ga0268266_10125150 3300028379 Bacteria 2293
179 Ga0307517_10001696 3300028786 Bacteria 36406
180 Ga0307515_10000188 3300028794 Bacteria 151439
181 Ga0307515_10002191 3300028794 Bacteria 42879
182 Ga0307515_10014262 3300028794 Bacteria 14757
183 Ga0307515_10099634 3300028794 Bacteria 3526
184 Ga0265332_10000809 3300031238 Bacteria 18996
185 Ga0265327_10000530 3300031251 Bacteria 65606
186 Ga0307513_10000206 3300031456 Bacteria 85338
187 Ga0307513_10044244 3300031456 Bacteria 4879
188 Ga0307513_10107756 3300031456 Bacteria 2788
189 Ga0307408_100000302 3300031548 Bacteria 47286
190 Ga0307408_100101045 3300031548 Bacteria 2197
191 Ga0307508_10003825 3300031616 Bacteria 15001
192 Ga0265314_10002998 3300031711 Bacteria 16702
193 Ga0307516_10003754 3300031730 Bacteria 19312
194 Ga0307405_10008500 3300031731 Bacteria 5209
195 Ga0307406_10000719 3300031901 Bacteria 18679
196 Ga0307406_10049403 3300031901 Bacteria 2662
197 Ga0307416_100005914 3300032002 Bacteria 7596
198 Ga0307411_10002317 3300032005 Bacteria 8365
199 Ga0395899_0008593 3300037312 Bacteria 7863
200 Ga0395900_0018222 3300037418 Bacteria 7163
201 Ga0395900_0050870 3300037418 Bacteria 4267
202 Ga0395898_0003423 3300037466 Bacteria 17769
203 Ga0395905_0000432 3300037471 Bacteria 58505
204 Ga0395905_0004720 3300037471 Bacteria 14077
205 Ga0395905_0044820 3300037471 Bacteria 4149
206 Ga0395901_0014911 3300038443 Bacteria 7897
207 Ga0436361_0147935 3300039447 Bacteria 5761
208 Ga0436361_0619676 3300039447 Bacteria 9969
209 Ga0439445_0000116 3300042004 Bacteria 13491
210 Ga0439449_0002146 3300042007 Bacteria 7743
211 Ga0450918_001101 3300042531 Bacteria 5557
212 Ga0451577_0006463 3300042876 Bacteria 11676
213 Ga0453683_0003134 3300044673 Bacteria 12339
214 Ga0453684_0013354 3300044712 Bacteria 13357
215 Ga0466959_0005371 3300045049 Bacteria 8772
216 Ga0451576_0008463 3300045051 Bacteria 12078
217 Ga0451576_0046856 3300045051 Bacteria 4550
218 Ga0495638_0022966 3300046460 Bacteria 4087
219 Ga0495639_0003149 3300046475 Bacteria 7166
220 Ga0495654_0000884 3300046530 Bacteria 22400
221 Ga0495633_0001408 3300046558 Bacteria 18752
222 Ga0495625_0000098 3300046660 Bacteria 140987
223 Ga0495686_0001064 3300047472 Bacteria 32736
224 Ga0496104_0011484 3300048907 Bacteria 7936
225 Ga0496105_0011403 3300048908 Bacteria 7021
226 Ga0496122_0000317 3300048925 Bacteria 105883
227 Ga0496123_0000264 3300048926 Bacteria 105015
228 Ga0496125_0001847 3300048928 Bacteria 29212
229 Ga0501047_0015234 3300049581 Bacteria 7324
230 nmdc:mga07m45_1264_c1 3300050496 Bacteria 11509
231 nmdc:mga07m45_2747_c1 3300050496 Bacteria 8302
232 nmdc:mga07m45_7399_c1 3300050496 Bacteria 5611
233 Ga0500578_0000450 3300053086 Bacteria 50269
234 Ga0500651_0000093 3300053093 Bacteria 55843
235 Ga0500651_0020485 3300053093 Bacteria 4115
236 Ga0500571_000137 3300053110 Bacteria 24800
237 Ga0500593_000102 3300053117 Bacteria 32540
238 Ga0500658_0000670 3300053134 Bacteria 14116
239 Ga0500622_0001769 3300053156 Bacteria 16554
240 Ga0500645_000240 3300053730 Bacteria 41120
241 Ga0590075_005130 3300059424 Bacteria 3097

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005530 Ga0070679_100038594 Ga0070679_1000385944 609
2 3300031456 Ga0307513_10044244 Ga0307513_100442442 619
3 3300039447 Ga0436361_0619676 Ga0436361_0619676_6057_7997 619
4 3300046460 Ga0495638_0022966 Ga0495638_0022966_1084_3024 619
5 3300005356 Ga0070674_100074190 Ga0070674_1000741901 621
6 3300005455 Ga0070663_100001147 Ga0070663_10000114715 624
7 3300026067 Ga0207678_10001140 Ga0207678_100011408 624
8 3300003759 Ga0055525_1000036 Ga0055525_1000036223 625
9 3300025230 Ga0209563_100014 Ga0209563_100014608 625
10 iso_pu_bacteria 2585428057 2587727272 625
11 iso_pu_bacteria 2585428058 2587735973 625
12 iso_pu_bacteria 2588253510 2588292691 625
13 iso_pu_bacteria 2643221592 2643967269 625
14 iso_pu_bacteria 2643221625 2644140100 625
15 iso_pu_bacteria 2643221648 2644271340 625
16 3300005328 Ga0070676_10005406 Ga0070676_100054067 626
17 3300005355 Ga0070671_100038200 Ga0070671_1000382004 626
18 3300005367 Ga0070667_100003068 Ga0070667_1000030686 626
19 3300005459 Ga0068867_100096638 Ga0068867_1000966381 626
20 3300025907 Ga0207645_10012998 Ga0207645_100129983 626
21 3300025931 Ga0207644_10026812 Ga0207644_100268122 626
22 3300025986 Ga0207658_10013093 Ga0207658_100130936 626
23 3300026089 Ga0207648_10007195 Ga0207648_100071958 626
24 3300028786 Ga0307517_10001696 Ga0307517_1000169628 626
25 3300028794 Ga0307515_10014262 Ga0307515_1001426213 626
26 3300031616 Ga0307508_10003825 Ga0307508_100038259 626
27 3300002773 JGI25152J39213_1003483 JGI25152J39213_10034835 627
28 3300003215 JGI25153J46596_10001814 JGI25153J46596_100018147 627
29 3300003215 JGI25153J46596_10002396 JGI25153J46596_1000239610 627
30 3300005262 Ga0065165_1001632 Ga0065165_100163210 627
31 3300005328 Ga0070676_10006159 Ga0070676_100061597 627
32 3300005331 Ga0070670_100003574 Ga0070670_10000357414 627
33 3300005331 Ga0070670_100031023 Ga0070670_1000310234 627
34 3300005331 Ga0070670_100042350 Ga0070670_1000423503 627
35 3300005334 Ga0068869_100018435 Ga0068869_1000184352 627
36 3300005354 Ga0070675_100003127 Ga0070675_1000031272 627
37 3300005355 Ga0070671_100116800 Ga0070671_1001168001 627
38 3300005356 Ga0070674_100002376 Ga0070674_1000023769 627
39 3300005356 Ga0070674_100003973 Ga0070674_10000397310 627
40 3300005364 Ga0070673_100011974 Ga0070673_1000119745 627
41 3300005364 Ga0070673_100054276 Ga0070673_1000542763 627
42 3300005459 Ga0068867_100002171 Ga0068867_10000217113 627
43 3300005459 Ga0068867_100101250 Ga0068867_1001012501 627
44 3300005467 Ga0070706_100029071 Ga0070706_1000290713 627
45 3300005543 Ga0070672_100002012 Ga0070672_1000020127 627
46 3300005577 Ga0068857_100010775 Ga0068857_1000107753 627
47 3300006353 Ga0075370_10014376 Ga0075370_100143765 627
48 3300006353 Ga0075370_10035747 Ga0075370_100357472 627
49 3300017792 Ga0163161_10003567 Ga0163161_1000356710 627
50 3300025245 Ga0207425_1000446 Ga0207425_10004469 627
51 3300025258 Ga0209129_1000212 Ga0209129_100021250 627
52 3300025295 Ga0209564_1000024 Ga0209564_1000024146 627
53 3300025297 Ga0209758_1000194 Ga0209758_100019421 627
54 3300025297 Ga0209758_1000220 Ga0209758_100022018 627
55 3300025298 Ga0209050_1000614 Ga0209050_100061410 627
56 3300025315 Ga0207697_10007764 Ga0207697_100077643 627
57 3300025907 Ga0207645_10001955 Ga0207645_1000195517 627
58 3300025910 Ga0207684_10015847 Ga0207684_100158472 627
59 3300025923 Ga0207681_10032736 Ga0207681_100327363 627
60 3300025925 Ga0207650_10001283 Ga0207650_1000128315 627
61 3300025925 Ga0207650_10009843 Ga0207650_100098435 627
62 3300025925 Ga0207650_10036601 Ga0207650_100366011 627
63 3300025926 Ga0207659_10013780 Ga0207659_100137802 627
64 3300025931 Ga0207644_10070710 Ga0207644_100707102 627
65 3300025937 Ga0207669_10021077 Ga0207669_100210772 627
66 3300025940 Ga0207691_10018449 Ga0207691_100184492 627
67 3300025942 Ga0207689_10055485 Ga0207689_100554853 627
68 3300025960 Ga0207651_10006503 Ga0207651_100065035 627
69 3300026089 Ga0207648_10003354 Ga0207648_1000335410 627
70 3300026089 Ga0207648_10027146 Ga0207648_100271465 627
71 3300026121 Ga0207683_10007168 Ga0207683_100071684 627
72 3300027526 Ga0209968_1000289 Ga0209968_10002892 627
73 3300027695 Ga0209966_1000046 Ga0209966_10000469 627
74 3300028794 Ga0307515_10000188 Ga0307515_1000018833 627
75 3300028794 Ga0307515_10002191 Ga0307515_1000219121 627
76 3300028794 Ga0307515_10099634 Ga0307515_100996344 627
77 3300031456 Ga0307513_10107756 Ga0307513_101077562 627
78 3300031731 Ga0307405_10008500 Ga0307405_100085006 627
79 3300031901 Ga0307406_10049403 Ga0307406_100494032 627
80 3300032002 Ga0307416_100005914 Ga0307416_1000059144 627
81 3300032005 Ga0307411_10002317 Ga0307411_1000231710 627
82 3300050496 nmdc:mga07m45_2747_c1 nmdc:mga07m45_2747_c1_1522_3414 627
83 3300053086 Ga0500578_0000450 Ga0500578_0000450_20290_22179 627
84 3300053093 Ga0500651_0020485 Ga0500651_0020485_2147_4036 627
85 3300053156 Ga0500622_0001769 Ga0500622_0001769_11901_13790 627
86 3300017792 Ga0163161_10000361 Ga0163161_1000036120 629
87 3300025294 Ga0209025_1000283 Ga0209025_100028345 629
88 3300044712 Ga0453684_0013354 Ga0453684_0013354_7070_8968 629
89 3300031238 Ga0265332_10000809 Ga0265332_1000080912 630
90 3300031711 Ga0265314_10002998 Ga0265314_1000299810 630
91 3300046558 Ga0495633_0001408 Ga0495633_0001408_10220_12172 630
92 3300031548 Ga0307408_100101045 Ga0307408_1001010451 631
93 3300047472 Ga0495686_0001064 Ga0495686_0001064_5242_7161 631
94 3300006038 Ga0075365_10085511 Ga0075365_100855111 633
95 3300045049 Ga0466959_0005371 Ga0466959_0005371_2553_4487 633
96 3300049581 Ga0501047_0015234 Ga0501047_0015234_116_2026 633
97 3300013306 Ga0163162_10045873 Ga0163162_100458734 634
98 3300037312 Ga0395899_0008593 Ga0395899_0008593_1083_3008 634
99 3300037418 Ga0395900_0018222 Ga0395900_0018222_155_2083 634
100 3300037418 Ga0395900_0050870 Ga0395900_0050870_1239_3164 634
101 3300037466 Ga0395898_0003423 Ga0395898_0003423_1056_2981 634
102 3300037471 Ga0395905_0000432 Ga0395905_0000432_43427_45370 634
103 3300037471 Ga0395905_0004720 Ga0395905_0004720_591_2534 634
104 3300037471 Ga0395905_0044820 Ga0395905_0044820_1653_3578 634
105 3300038443 Ga0395901_0014911 Ga0395901_0014911_287_2206 634
106 3300046530 Ga0495654_0000884 Ga0495654_0000884_2391_4313 634
107 3300048907 Ga0496104_0011484 Ga0496104_0011484_5512_7464 634
108 3300048908 Ga0496105_0011403 Ga0496105_0011403_3600_5552 634
109 3300050496 nmdc:mga07m45_1264_c1 nmdc:mga07m45_1264_c1_8952_10916 634
110 iso_pu_bacteria 2932422444 2932423171 634
111 iso_pu_bacteria 2547132374 2548501354 635
112 iso_pu_bacteria 2643221717 2644649101 635
113 3300009176 Ga0105242_10005023 Ga0105242_100050237 636
114 3300025934 Ga0207686_10003576 Ga0207686_100035767 636
115 3300042876 Ga0451577_0006463 Ga0451577_0006463_3439_5364 636
116 3300044673 Ga0453683_0003134 Ga0453683_0003134_4474_6399 636
117 3300045051 Ga0451576_0008463 Ga0451576_0008463_3496_5421 636
118 3300045051 Ga0451576_0046856 Ga0451576_0046856_2547_4472 636
119 iso_pu_bacteria 2511231002 2511245041 636
120 3300003792 Ga0055540_1010395 Ga0055540_10103951 637
121 3300003794 Ga0055531_10000974 Ga0055531_1000097414 637
122 3300014497 Ga0182008_10000620 Ga0182008_100006208 637
123 3300025303 Ga0209051_1000306 Ga0209051_100030616 637
124 3300025304 Ga0209257_1000015 Ga0209257_1000015437 637
125 3300025304 Ga0209257_1000108 Ga0209257_1000108273 637
126 3300039447 Ga0436361_0147935 Ga0436361_0147935_2652_4583 637
127 3300059424 Ga0590075_005130 Ga0590075_005130_150_2087 637
128 iso_pu_bacteria 2643221570 2643868422 637
129 iso_pu_bacteria 2643221596 2643994533 637
130 iso_pu_bacteria 2643221652 2644295358 637
131 iso_pu_bacteria 2721755523 2722881304 637
132 iso_pu_bacteria 2839138175 2839141536 637
133 iso_pu_bacteria 2894023352 2894027961 637
134 iso_pu_bacteria 2990710928 2990715450 637
135 3300031548 Ga0307408_100000302 Ga0307408_10000030227 638
136 iso_pu_bacteria 2842718218 2842722001 638
137 iso_pu_bacteria 2842733646 2842737837 638
138 iso_pu_bacteria 2643221609 2644061555 639
139 iso_pu_bacteria 2643221611 2644075087 639
140 iso_pu_bacteria 2738543012 2739243251 639
141 iso_pu_bacteria 2816332133 2816473829 639
142 iso_pu_bacteria 2974320154 2974321873 639
143 3300002704 JGI25155J39150_1000139 JGI25155J39150_100013926 640
144 3300002705 JGI25156J39149_1000280 JGI25156J39149_10002808 640
145 3300002738 JGI25154J39366_1000251 JGI25154J39366_10002518 640
146 3300002741 JGI25157J39369_1000320 JGI25157J39369_10003208 640
147 3300002774 JGI25150J39212_1003322 JGI25150J39212_10033223 640
148 3300002987 JGI25159J45721_1000602 JGI25159J45721_10006025 640
149 3300002987 JGI25159J45721_1000994 JGI25159J45721_10009949 640
150 3300003187 JGI25151J46595_10002705 JGI25151J46595_100027051 640
151 3300003354 JGI25160J50197_1000268 JGI25160J50197_10002689 640
152 3300003374 JGI25161J50226_1000036 JGI25161J50226_100003637 640
153 3300003771 Ga0055526_1001659 Ga0055526_100165915 640
154 3300003773 Ga0055537_1000075 Ga0055537_100007530 640
155 3300003775 Ga0055524_1000098 Ga0055524_100009835 640
156 3300003790 Ga0055528_1000255 Ga0055528_100025535 640
157 3300003791 Ga0055530_10000228 Ga0055530_1000022826 640
158 3300003792 Ga0055540_1000203 Ga0055540_100020317 640
159 3300003792 Ga0055540_1000361 Ga0055540_100036119 640
160 3300003794 Ga0055531_10006016 Ga0055531_100060164 640
161 3300004625 Ga0055543_1000746 Ga0055543_100074615 640
162 3300005262 Ga0065165_1004369 Ga0065165_10043695 640
163 3300005262 Ga0065165_1008117 Ga0065165_10081171 640
164 3300005289 Ga0065704_10080776 Ga0065704_100807762 640
165 3300006946 Ga0079104_1000451 Ga0079104_10004519 640
166 3300009092 Ga0105250_10000318 Ga0105250_1000031831 640
167 3300009148 Ga0105243_10003456 Ga0105243_100034568 640
168 3300025206 Ga0209435_100002 Ga0209435_100002726 640
169 3300025245 Ga0207425_1002023 Ga0207425_10020235 640
170 3300025246 Ga0209646_1000001 Ga0209646_10000012869 640
171 3300025250 Ga0209026_1000121 Ga0209026_100012195 640
172 3300025256 Ga0209759_1000001 Ga0209759_10000012500 640
173 3300025258 Ga0209129_1005591 Ga0209129_10055913 640
174 3300025263 Ga0209565_1000026 Ga0209565_100002674 640
175 3300025263 Ga0209565_1000539 Ga0209565_100053914 640
176 3300025273 Ga0209673_1000009 Ga0209673_100000983 640
177 3300025284 Ga0209130_1000109 Ga0209130_100010989 640
178 3300025284 Ga0209130_1000347 Ga0209130_100034729 640
179 3300025291 Ga0209675_1000246 Ga0209675_100024636 640
180 3300025291 Ga0209675_1001907 Ga0209675_10019078 640
181 3300025292 Ga0209676_1000013 Ga0209676_1000013163 640
182 3300025292 Ga0209676_1004472 Ga0209676_10044724 640
183 3300025294 Ga0209025_1003290 Ga0209025_10032905 640
184 3300025294 Ga0209025_1003831 Ga0209025_10038313 640
185 3300025294 Ga0209025_1006548 Ga0209025_10065485 640
186 3300025294 Ga0209025_1009712 Ga0209025_10097124 640
187 3300025295 Ga0209564_1000243 Ga0209564_1000243117 640
188 3300025295 Ga0209564_1000885 Ga0209564_100088525 640
189 3300025298 Ga0209050_1000008 Ga0209050_1000008163 640
190 3300025298 Ga0209050_1004783 Ga0209050_10047835 640
191 3300025298 Ga0209050_1007053 Ga0209050_10070532 640
192 3300025299 Ga0209256_1000003 Ga0209256_1000003238 640
193 3300025302 Ga0207426_1001362 Ga0207426_100136214 640
194 3300025302 Ga0207426_1001685 Ga0207426_10016859 640
195 3300025303 Ga0209051_1000005 Ga0209051_1000005163 640
196 3300025304 Ga0209257_1000048 Ga0209257_1000048163 640
197 3300025711 Ga0207696_1001054 Ga0207696_10010546 640
198 3300025935 Ga0207709_10000152 Ga0207709_1000015234 640
199 3300027111 Ga0209281_1000072 Ga0209281_100007275 640
200 3300027614 Ga0209970_1001832 Ga0209970_10018322 640
201 3300031456 Ga0307513_10000206 Ga0307513_1000020648 640
202 3300031730 Ga0307516_10003754 Ga0307516_1000375410 640
203 3300031901 Ga0307406_10000719 Ga0307406_1000071913 640
204 3300048928 Ga0496125_0001847 Ga0496125_0001847_19004_20947 640
205 3300053117 Ga0500593_000102 Ga0500593_000102_18153_20102 640
206 3300053730 Ga0500645_000240 Ga0500645_000240_14842_16800 640
207 iso_pu_bacteria 2842747753 2842752807 640
208 iso_pu_bacteria 2643221672 2644398834 641
209 iso_pu_bacteria 2919704043 2919708881 641
210 iso_pu_bacteria 2599185214 2599621805 642
211 iso_pu_bacteria 2599185226 2599670511 642
212 iso_pu_bacteria 2599185227 2599679001 642
213 iso_pu_bacteria 2599185229 2599691316 642
214 iso_pu_bacteria 2643221628 2644163739 642
215 iso_pu_bacteria 2643221658 2644327031 642
216 iso_pu_bacteria 2738541277 2738721868 642
217 iso_pu_bacteria 2738543019 2739282232 642
218 iso_pu_bacteria 2831265667 2831268963 642
219 iso_pu_bacteria 2838054893 2838058391 642
220 iso_pu_bacteria 2904449895 2904451110 642
221 iso_pu_bacteria 2904456579 2904457964 642
222 iso_pu_bacteria 2904541872 2904546707 642
223 iso_pu_bacteria 2919462493 2919465685 642
224 iso_pu_bacteria 2928070936 2928072473 642
225 iso_pu_bacteria 2928084124 2928085672 642
226 iso_pu_bacteria 2929160207 2929166156 642
227 iso_pu_bacteria 2929520902 2929526421 642
228 iso_pu_bacteria 2945909444 2945915003 642
229 iso_pu_bacteria 2945945610 2945950975 642
230 iso_pu_bacteria 2945972063 2945974362 642
231 iso_pu_bacteria 2945984333 2945989599 642
232 3300048925 Ga0496122_0000317 Ga0496122_0000317_27950_29887 643
233 3300048926 Ga0496123_0000264 Ga0496123_0000264_41250_43187 643
234 iso_pu_bacteria 2738541307 2738882041 643
235 3300006048 Ga0075363_100047571 Ga0075363_1000475712 644
236 3300006195 Ga0075366_10020086 Ga0075366_100200862 645
237 3300006353 Ga0075370_10059346 Ga0075370_100593461 645
238 3300050496 nmdc:mga07m45_7399_c1 nmdc:mga07m45_7399_c1_3145_5085 645
239 3300001989 JGI24739J22299_10003416 JGI24739J22299_100034162 646
240 3300002987 JGI25159J45721_1006550 JGI25159J45721_10065502 646
241 3300003354 JGI25160J50197_1007111 JGI25160J50197_10071112 646
242 3300003773 Ga0055537_1000663 Ga0055537_100066317 646
243 3300003773 Ga0055537_1000875 Ga0055537_100087512 646
244 3300003784 Ga0055534_1000346 Ga0055534_100034615 646
245 3300003792 Ga0055540_1000765 Ga0055540_10007655 646
246 3300006038 Ga0075365_10023889 Ga0075365_100238894 646
247 3300006048 Ga0075363_100006348 Ga0075363_1000063483 646
248 3300006051 Ga0075364_10013225 Ga0075364_100132254 646
249 3300006177 Ga0075362_10016789 Ga0075362_100167892 646
250 3300006178 Ga0075367_10047099 Ga0075367_100470991 646
251 3300006195 Ga0075366_10003188 Ga0075366_100031885 646
252 3300006195 Ga0075366_10016949 Ga0075366_100169493 646
253 3300006353 Ga0075370_10002017 Ga0075370_100020179 646
254 3300006353 Ga0075370_10020263 Ga0075370_100202633 646
255 3300013100 Ga0157373_10076800 Ga0157373_100768002 646
256 3300013306 Ga0163162_10032803 Ga0163162_100328032 646
257 3300014497 Ga0182008_10009243 Ga0182008_100092434 646
258 3300014497 Ga0182008_10027940 Ga0182008_100279402 646
259 3300017792 Ga0163161_10064754 Ga0163161_100647542 646
260 3300025258 Ga0209129_1001889 Ga0209129_10018897 646
261 3300025263 Ga0209565_1000259 Ga0209565_100025950 646
262 3300025263 Ga0209565_1001271 Ga0209565_10012717 646
263 3300025273 Ga0209673_1000193 Ga0209673_100019338 646
264 3300025273 Ga0209673_1001714 Ga0209673_100171412 646
265 3300025273 Ga0209673_1002564 Ga0209673_10025649 646
266 3300025291 Ga0209675_1000220 Ga0209675_100022038 646
267 3300025291 Ga0209675_1003151 Ga0209675_10031513 646
268 3300025292 Ga0209676_1000074 Ga0209676_1000074249 646
269 3300025294 Ga0209025_1001101 Ga0209025_100110130 646
270 3300025294 Ga0209025_1003444 Ga0209025_10034443 646
271 3300025295 Ga0209564_1001279 Ga0209564_100127914 646
272 3300025295 Ga0209564_1001393 Ga0209564_100139316 646
273 3300025298 Ga0209050_1000015 Ga0209050_1000015221 646
274 3300025299 Ga0209256_1000304 Ga0209256_100030440 646
275 3300025302 Ga0207426_1000130 Ga0207426_1000130172 646
276 3300025303 Ga0209051_1000010 Ga0209051_1000010221 646
277 3300025303 Ga0209051_1001349 Ga0209051_10013496 646
278 3300025304 Ga0209257_1000026 Ga0209257_1000026456 646
279 3300025981 Ga0207640_10065341 Ga0207640_100653411 646
280 3300026116 Ga0207674_10061189 Ga0207674_100611893 646
281 3300027666 Ga0209282_1000320 Ga0209282_100032014 646
282 3300028379 Ga0268266_10125150 Ga0268266_101251502 646
283 3300031251 Ga0265327_10000530 Ga0265327_1000053040 646
284 3300042004 Ga0439445_0000116 Ga0439445_0000116_5051_7012 646
285 3300042007 Ga0439449_0002146 Ga0439449_0002146_5694_7658 646
286 3300042531 Ga0450918_001101 Ga0450918_001101_3066_5027 646
287 3300046475 Ga0495639_0003149 Ga0495639_0003149_2304_4250 646
288 3300046660 Ga0495625_0000098 Ga0495625_0000098_6633_8588 646
289 3300053093 Ga0500651_0000093 Ga0500651_0000093_21912_23876 646
290 3300053110 Ga0500571_000137 Ga0500571_000137_14264_16219 646
291 3300053134 Ga0500658_0000670 Ga0500658_0000670_2742_4697 646

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01553

Acyltransferase

Acyltransferase

464

598

0.91

PF05977

MFS_3

Transmembrane secretion effector

17

371

0.76

PF07690

MFS_1

Major Facilitator Superfamily

31

366

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8273 31 432
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8254 27 433
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8116 27 433
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.7982 31 432
8t69-assembly1.cif.gz_A human vmat2 in complex with tetrabenazine 0.7974 27 433
ID Description Score Start End Superfamily
af_P54219_107_289_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9078 68 208 1.20.1250.20
af_Q4DRS8_153_366_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8861 456 584 3.40.50.2000
af_Q8I5S7_22_233_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8754 456 584 3.40.50.2000
af_Q9VCJ5_201_360_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8748 68 206 1.20.1250.20
af_Q2G2W1_141_346_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8634 27 206 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1H5FK13-F1-model_v4 deleted 0.9675 7 448
AF-A0A4Q6BME3-F1-model_v4 MFS transporter 0.9613 91 495 GO:0005886
GO:0016746
GO:0022857
AF-A0A257PJQ8-F1-model_v4 MFS transporter 0.955 84 445 GO:0005886
GO:0022857
AF-A0A4Q6BME3-F1-model_v4 MFS transporter 0.9453 91 495 GO:0005886
GO:0016746
GO:0022857
AF-A0A257PJQ8-F1-model_v4 MFS transporter 0.9343 84 445 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
85.34 0.84 High
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Predicted Structure (AlphaFold2)

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