F390441

General Info

Members Datasets Scaffolds Average Seq Length
291 202 288 187

Family's Representative Sequence

Representative Sequence 3300032005|Ga0307411_10200848|Ga0307411_102008482
Length 207
Sequence MEGSDSGFALRLSIPYLTRMPMPEPPQDLSRLSLAEVVRLASERRLPPVESWNPTHCGPSDMRIARDGTWFHQGSPIGREAMVRLFSTILRREPDGGFVLVTPVEKLDIEVEDAPFVAVELKSEREGRDRSLAFRLNTGDMIVAGPDHPLRLRDGEDGPHPYVEVRRGLDALIARPVYYDLASLALAEGAEPPGLWSDGVFFALDAS

Samples

Sample ID Description Type Environment
1 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
2 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
10 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
20 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
72 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
73 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
74 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
77 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
78 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
80 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
127 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
128 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
129 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
130 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
134 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
141 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
142 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
143 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
144 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
145 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
150 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
151 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
152 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
155 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
156 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
178 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
179 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
180 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
181 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
182 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
183 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
184 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
185 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
186 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
187 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
188 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
189 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
190 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
193 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
194 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
197 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
198 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
199 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
200 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
201 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
202 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 0.69
Isolates 1.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.31
Nodule 0
Rhizoplane 2.06
Rhizosphere 68.04
Stem 0
Stem Tuber 0
Unclassified 8.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000307 3300001915 Bacteria 14680
2 JGI24740J21852_10004318 3300001979 Bacteria 6123
3 JGI24739J22299_10003214 3300001989 Bacteria 6232
4 JGI24739J22299_10003845 3300001989 Bacteria 5730
5 JGI24737J22298_10001695 3300001990 Bacteria 7861
6 JGI24737J22298_10003283 3300001990 Bacteria 5732
7 JGI24737J22298_10058960 3300001990 Bacteria 1157
8 JGI24735J21928_10004486 3300002067 Bacteria 4692
9 JGI24735J21928_10007509 3300002067 Bacteria 3554
10 JGI24735J21928_10013010 3300002067 Bacteria 2623
11 JGI24738J21930_10000040 3300002075 Bacteria 25176
12 JGI24738J21930_10005661 3300002075 Bacteria 2975
13 JGI24738J21930_10006208 3300002075 Bacteria 2822
14 JGI24749J21850_1000218 3300002076 Bacteria 8932
15 JGI24751J29686_10000355 3300002459 Bacteria 16147
16 JGI25165J46597_1000082 3300003214 Bacteria 174736
17 JGI25153J46596_10033285 3300003215 Bacteria 1703
18 rootH2_10098945 3300003320 Bacteria 1102
19 Ga0055529_1014067 3300003763 Bacteria 1016
20 Ga0055537_1001376 3300003773 Bacteria 9731
21 Ga0055524_1000180 3300003775 Bacteria 71495
22 Ga0055530_10000061 3300003791 Bacteria 95363
23 Ga0055530_10005367 3300003791 Bacteria 6125
24 Ga0055531_10000035 3300003794 Bacteria 147414
25 Ga0065165_1004171 3300005262 Bacteria 9227
26 Ga0065165_1011976 3300005262 Bacteria 3564
27 Ga0065165_1022888 3300005262 Bacteria 2130
28 Ga0065707_10127304 3300005295 Bacteria 1986
29 Ga0070658_10000533 3300005327 Bacteria 33051
30 Ga0070658_10147136 3300005327 Bacteria 1970
31 Ga0070658_10206758 3300005327 Bacteria 1658
32 Ga0070683_100181515 3300005329 Bacteria 1998
33 Ga0070670_100000005 3300005331 Bacteria 351569
34 Ga0070670_100057808 3300005331 Bacteria 3328
35 Ga0070677_10010721 3300005333 Bacteria 3142
36 Ga0068868_100000107 3300005338 Bacteria 51516
37 Ga0070660_100022503 3300005339 Bacteria 4661
38 Ga0070660_100026286 3300005339 Bacteria 4332
39 Ga0070660_100959157 3300005339 Bacteria 722
40 Ga0070661_100000011 3300005344 Bacteria 175355
41 Ga0070692_10031768 3300005345 Bacteria 2649
42 Ga0070669_100000119 3300005353 Bacteria 73001
43 Ga0070667_100000407 3300005367 Bacteria 46001
44 Ga0070663_100852422 3300005455 Bacteria 784
45 Ga0070662_100003287 3300005457 Bacteria 10067
46 Ga0070662_100009204 3300005457 Bacteria 6449
47 Ga0070685_10036456 3300005466 Bacteria 2780
48 Ga0068853_100001339 3300005539 Bacteria 17745
49 Ga0068853_101381796 3300005539 Bacteria 681
50 Ga0070672_100318356 3300005543 Bacteria 1322
51 Ga0070665_100000773 3300005548 Bacteria 42151
52 Ga0070665_100327505 3300005548 Bacteria 1536
53 Ga0068855_100057849 3300005563 Bacteria 4544
54 Ga0068855_100185347 3300005563 Bacteria 2351
55 Ga0068855_100378338 3300005563 Bacteria 1555
56 Ga0070664_100002181 3300005564 Bacteria 15727
57 Ga0068854_100079050 3300005578 Bacteria 2424
58 Ga0068856_100086110 3300005614 Bacteria 3122
59 Ga0068852_100381492 3300005616 Bacteria 1383
60 Ga0068859_100010149 3300005617 Bacteria 9485
61 Ga0068859_100046310 3300005617 Bacteria 4368
62 Ga0068859_100141628 3300005617 Bacteria 2478
63 Ga0068864_100000011 3300005618 Bacteria 350056
64 Ga0068861_100113021 3300005719 Bacteria 2178
65 Ga0068851_10051085 3300005834 Bacteria 2100
66 Ga0068863_100025449 3300005841 Bacteria 5644
67 Ga0068860_100001110 3300005843 Bacteria 29623
68 Ga0068860_100388104 3300005843 Bacteria 1379
69 Ga0068862_100000011 3300005844 Bacteria 270105
70 Ga0068862_100000125 3300005844 Bacteria 89536
71 Ga0081539_10028125 3300005985 Bacteria 3542
72 Ga0075370_10358151 3300006353 Bacteria 872
73 Ga0075429_100216454 3300006880 Bacteria 1678
74 Ga0097620_100010149 3300006931 Bacteria 9485
75 Ga0097620_100046310 3300006931 Bacteria 4368
76 Ga0097620_100141635 3300006931 Bacteria 2478
77 Ga0105240_10170523 3300009093 Bacteria 2578
78 Ga0105245_10119368 3300009098 Bacteria 2462
79 Ga0105247_10018879 3300009101 Bacteria 4140
80 Ga0105243_10542407 3300009148 Bacteria 1110
81 Ga0105241_10002180 3300009174 Bacteria 14753
82 Ga0105248_10000921 3300009177 Bacteria 32763
83 Ga0105237_10009454 3300009545 Bacteria 10441
84 Ga0105237_10023140 3300009545 Bacteria 6370
85 Ga0105238_10014105 3300009551 Bacteria 8080
86 Ga0105238_10258851 3300009551 Bacteria 1719
87 Ga0105249_10000015 3300009553 Bacteria 282138
88 Ga0105239_10758667 3300010375 Bacteria 1111
89 Ga0157373_10027445 3300013100 Bacteria 4107
90 Ga0157371_10057869 3300013102 Bacteria 2749
91 Ga0157370_10020245 3300013104 Bacteria 6646
92 Ga0157369_10026119 3300013105 Bacteria 6479
93 Ga0157369_10175383 3300013105 Bacteria 2257
94 Ga0157369_10451381 3300013105 Bacteria 1331
95 Ga0157372_10107353 3300013307 Bacteria 3194
96 Ga0157372_10778411 3300013307 Unclassified 1112
97 Ga0157372_11401716 3300013307 Bacteria 806
98 Ga0157380_10001430 3300014326 Bacteria 15629
99 Ga0206354_11109695 3300020081 Bacteria 7304
100 Ga0206353_11073733 3300020082 Bacteria 7999
101 Ga0213874_10051551 3300021377 Bacteria 1264
102 Ga0213876_10033240 3300021384 Bacteria 2719
103 Ga0213875_10000893 3300021388 Bacteria 21798
104 Ga0207427_100526 3300025231 Bacteria 19933
105 Ga0209437_105635 3300025233 Bacteria 2123
106 Ga0207425_1002591 3300025245 Bacteria 6275
107 Ga0209026_1001371 3300025250 Bacteria 10877
108 Ga0209148_1001953 3300025254 Bacteria 8329
109 Ga0209233_1000041 3300025261 Bacteria 515463
110 Ga0209233_1000058 3300025261 Bacteria 421872
111 Ga0209565_1000012 3300025263 Bacteria 606500
112 Ga0209455_1005008 3300025272 Bacteria 4196
113 Ga0209673_1005653 3300025273 Bacteria 6241
114 Ga0209758_1002916 3300025297 Bacteria 16491
115 Ga0209050_1000014 3300025298 Bacteria 774327
116 Ga0209050_1002236 3300025298 Bacteria 17279
117 Ga0209256_1000012 3300025299 Bacteria 790371
118 Ga0209257_1000019 3300025304 Bacteria 774261
119 Ga0209257_1001431 3300025304 Bacteria 28304
120 Ga0209257_1006564 3300025304 Bacteria 7420
121 Ga0207656_10042755 3300025321 Bacteria 1929
122 Ga0207656_10432649 3300025321 Bacteria 664
123 Ga0207682_10013706 3300025893 Bacteria 3156
124 Ga0207710_10003527 3300025900 Bacteria 6951
125 Ga0207647_10001149 3300025904 Bacteria 20375
126 Ga0207647_10002065 3300025904 Bacteria 15348
127 Ga0207647_10004587 3300025904 Bacteria 10235
128 Ga0207647_10062655 3300025904 Bacteria 2265
129 Ga0207645_10353136 3300025907 Bacteria 984
130 Ga0207705_10000314 3300025909 Bacteria 44233
131 Ga0207705_10159850 3300025909 Bacteria 1692
132 Ga0207654_10014074 3300025911 Bacteria 4128
133 Ga0207695_10100815 3300025913 Bacteria 2882
134 Ga0207695_10162729 3300025913 Bacteria 2162
135 Ga0207671_10013325 3300025914 Bacteria 6555
136 Ga0207657_10001001 3300025919 Bacteria 30059
137 Ga0207657_10008563 3300025919 Bacteria 10367
138 Ga0207649_10000221 3300025920 Bacteria 46316
139 Ga0207681_10000001 3300025923 Bacteria 1105841
140 Ga0207694_10047346 3300025924 Bacteria 3326
141 Ga0207694_10125361 3300025924 Bacteria 2054
142 Ga0207694_10303334 3300025924 Bacteria 1315
143 Ga0207650_10000018 3300025925 Bacteria 352120
144 Ga0207650_10239769 3300025925 Bacteria 1465
145 Ga0207687_10106090 3300025927 Bacteria 2076
146 Ga0207690_10357445 3300025932 Bacteria 1156
147 Ga0207706_10003421 3300025933 Bacteria 15153
148 Ga0207706_10017521 3300025933 Bacteria 6456
149 Ga0207706_10018544 3300025933 Bacteria 6260
150 Ga0207669_10074604 3300025937 Bacteria 2146
151 Ga0207711_10507447 3300025941 Bacteria 1124
152 Ga0207661_11098155 3300025944 Bacteria 732
153 Ga0207679_10115317 3300025945 Bacteria 2128
154 Ga0207667_10061308 3300025949 Bacteria 3935
155 Ga0207667_10232111 3300025949 Bacteria 1889
156 Ga0207712_10000023 3300025961 Bacteria 282081
157 Ga0207668_10014202 3300025972 Bacteria 4927
158 Ga0207640_10064507 3300025981 Bacteria 2439
159 Ga0207640_10124520 3300025981 Bacteria 1853
160 Ga0207658_10001469 3300025986 Bacteria 18347
161 Ga0207677_10000027 3300026023 Bacteria 125785
162 Ga0207639_10002701 3300026041 Bacteria 11908
163 Ga0207639_10027189 3300026041 Bacteria 4164
164 Ga0207639_11301054 3300026041 Bacteria 682
165 Ga0207678_10002436 3300026067 Bacteria 16913
166 Ga0207702_10004659 3300026078 Bacteria 12114
167 Ga0207676_10000004 3300026095 Bacteria 725417
168 Ga0207674_10006918 3300026116 Bacteria 13286
169 Ga0207674_10030243 3300026116 Bacteria 5696
170 Ga0207675_100000119 3300026118 Bacteria 64605
171 Ga0207698_10113565 3300026142 Bacteria 2276
172 Ga0268266_10000432 3300028379 Bacteria 62927
173 Ga0268266_10726428 3300028379 Bacteria 958
174 Ga0268265_10000002 3300028380 Bacteria 1035381
175 Ga0268265_10000049 3300028380 Bacteria 177242
176 Ga0268264_10000682 3300028381 Bacteria 39550
177 Ga0268264_10105703 3300028381 Bacteria 2456
178 Ga0268264_10151426 3300028381 Bacteria 2080
179 Ga0307513_10019453 3300031456 Bacteria 8084
180 Ga0307408_100003756 3300031548 Bacteria 10336
181 Ga0307408_100185542 3300031548 Bacteria 1672
182 Ga0307408_100357804 3300031548 Bacteria 1241
183 Ga0307408_100658122 3300031548 Bacteria 937
184 Ga0307405_10019930 3300031731 Bacteria 3736
185 Ga0307405_10187458 3300031731 Bacteria 1491
186 Ga0307405_10307886 3300031731 Bacteria 1205
187 Ga0307413_10345336 3300031824 Bacteria 1146
188 Ga0307413_10896794 3300031824 Bacteria 753
189 Ga0307406_10023032 3300031901 Bacteria 3701
190 Ga0307412_10176932 3300031911 Bacteria 1600
191 Ga0307412_11172431 3300031911 Bacteria 687
192 Ga0307409_100838387 3300031995 Bacteria 929
193 Ga0307414_10040823 3300032004 Bacteria 3137
194 Ga0307414_10418192 3300032004 Bacteria 1168
195 Ga0307411_10200848 3300032005 Bacteria 1531
196 Ga0307510_10002694 3300033180 Bacteria 20310
197 Ga0373937_0764599 3300036401 Bacteria 913
198 Ga0373925_0309347 3300037068 Bacteria 1277
199 Ga0395899_0003962 3300037312 Bacteria 11669
200 Ga0395900_0017530 3300037418 Bacteria 7307
201 Ga0436364_1126870 3300037853 Bacteria 43496
202 Ga0395901_0251462 3300038443 Bacteria 1841
203 Ga0395901_0553383 3300038443 Bacteria 1166
204 Ga0400483_015030 3300039062 Bacteria 1238
205 Ga0400483_238794 3300039062 Bacteria 1030
206 Ga0436365_0511712 3300039437 Bacteria 893
207 Ga0436365_1398144 3300039437 Bacteria 6886
208 Ga0436365_1514513 3300039437 Bacteria 29798
209 Ga0439448_0002148 3300042005 Bacteria 5310
210 Ga0439458_0000540 3300042157 Bacteria 9709
211 Ga0495627_000079 3300046453 Bacteria 118475
212 Ga0495585_0229786 3300046492 Bacteria 933
213 Ga0495606_0002456 3300046507 Bacteria 21498
214 Ga0495606_0285723 3300046507 Bacteria 900
215 Ga0495606_0326711 3300046507 Bacteria 822
216 Ga0495643_0041801 3300046522 Bacteria 2499
217 Ga0495648_0014243 3300046524 Bacteria 5833
218 Ga0495663_0031571 3300046525 Bacteria 1574
219 Ga0495609_0181358 3300046538 Bacteria 886
220 Ga0495633_0072093 3300046558 Bacteria 1611
221 Ga0495668_0104913 3300046616 Bacteria 1546
222 Ga0495625_0000091 3300046660 Bacteria 146647
223 Ga0495625_0161106 3300046660 Bacteria 1503
224 Ga0495669_0042191 3300046684 Bacteria 2028
225 Ga0495660_0087855 3300046810 Bacteria 1621
226 Ga0495673_0051758 3300047469 Bacteria 1797
227 Ga0495686_0001180 3300047472 Bacteria 30452
228 Ga0495686_0001594 3300047472 Bacteria 23956
229 Ga0495686_0046687 3300047472 Bacteria 2737
230 Ga0496104_0741018 3300048907 Bacteria 890
231 Ga0496108_0462766 3300048911 Bacteria 1108
232 Ga0496109_0134956 3300048912 Bacteria 2305
233 Ga0496110_0020251 3300048913 Bacteria 5615
234 Ga0496113_0197568 3300048916 Bacteria 1598
235 Ga0496116_0149703 3300048919 Bacteria 1299
236 Ga0496118_0024653 3300048921 Bacteria 5185
237 Ga0496118_0041099 3300048921 Bacteria 3666
238 Ga0496121_0025198 3300048924 Bacteria 5655
239 Ga0496122_0016436 3300048925 Bacteria 7002
240 Ga0496123_0008165 3300048926 Bacteria 9657
241 Ga0496124_0099771 3300048927 Bacteria 2354
242 Ga0496125_0009861 3300048928 Bacteria 9718
243 Ga0496125_0074179 3300048928 Bacteria 2640
244 Ga0496125_0128542 3300048928 Bacteria 1789
245 Ga0496126_0070661 3300048929 Bacteria 3110
246 Ga0496126_0373154 3300048929 Bacteria 1163
247 Ga0501032_0354721 3300049569 Bacteria 945
248 Ga0501036_1152872 3300049572 Bacteria 632
249 Ga0501038_0391104 3300049574 Bacteria 1077
250 Ga0501043_0006052 3300049579 Bacteria 9724
251 Ga0501047_0006687 3300049581 Bacteria 10839
252 Ga0501048_0080642 3300049582 Bacteria 2296
253 Ga0501211_002174 3300049658 Bacteria 2082
254 Ga0501235_000658 3300049669 Bacteria 6988
255 Ga0500643_000222 3300053087 Bacteria 53015
256 Ga0500643_000241 3300053087 Bacteria 50801
257 Ga0500643_000937 3300053087 Bacteria 18234
258 Ga0500643_004370 3300053087 Bacteria 6420
259 Ga0500643_006201 3300053087 Bacteria 5029
260 Ga0500647_0004525 3300053091 Bacteria 5616
261 Ga0500651_0055350 3300053093 Bacteria 2485
262 Ga0500641_0000796 3300053096 Bacteria 11401
263 Ga0500641_0039372 3300053096 Bacteria 1904
264 Ga0500555_044794 3300053103 Bacteria 1224
265 Ga0500556_0002678 3300053104 Bacteria 5540
266 Ga0500556_0003941 3300053104 Bacteria 4285
267 Ga0500562_006359 3300053108 Bacteria 2978
268 Ga0500562_016704 3300053108 Bacteria 1888
269 Ga0500593_112882 3300053117 Bacteria 1113
270 Ga0500614_008093 3300053123 Bacteria 2226
271 Ga0500618_014052 3300053125 Bacteria 2056
272 Ga0500642_0001690 3300053130 Bacteria 6363
273 Ga0500655_000092 3300053133 Bacteria 23519
274 Ga0500568_0002318 3300053139 Bacteria 11299
275 Ga0500577_0045150 3300053142 Bacteria 1627
276 Ga0500590_019970 3300053148 Bacteria 3473
277 Ga0500604_0000017 3300053151 Bacteria 82010
278 Ga0500616_0000711 3300053153 Bacteria 38558
279 Ga0500616_0107763 3300053153 Bacteria 1351
280 Ga0500622_0025797 3300053156 Bacteria 3103
281 Ga0500622_0032676 3300053156 Bacteria 2728
282 Ga0500639_028485 3300053163 Bacteria 2952
283 Ga0500636_0137835 3300053177 Bacteria 1353
284 Ga0500636_0292850 3300053177 Bacteria 806
285 Ga0500570_004853 3300053724 Bacteria 7123
286 Ga0500645_001015 3300053730 Bacteria 15775
287 Ga0500645_002871 3300053730 Bacteria 7378
288 Ga0500552_005089 3300053733 Bacteria 1418

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005329 Ga0070683_100181515 Ga0070683_1001815151 172
2 3300013105 Ga0157369_10175383 Ga0157369_101753832 172
3 3300025944 Ga0207661_11098155 Ga0207661_110981551 172
4 3300005338 Ga0068868_100000107 Ga0068868_10000010728 175
5 3300009098 Ga0105245_10119368 Ga0105245_101193683 175
6 3300025927 Ga0207687_10106090 Ga0207687_101060903 175
7 3300026023 Ga0207677_10000027 Ga0207677_1000002730 175
8 3300046616 Ga0495668_0104913 Ga0495668_0104913_793_1338 176
9 3300053087 Ga0500643_000222 Ga0500643_000222_1874_2419 176
10 3300053087 Ga0500643_006201 Ga0500643_006201_816_1358 176
11 3300053096 Ga0500641_0000796 Ga0500641_0000796_9404_9949 176
12 3300053103 Ga0500555_044794 Ga0500555_044794_61_606 176
13 3300053104 Ga0500556_0002678 Ga0500556_0002678_4551_5096 176
14 3300053104 Ga0500556_0003941 Ga0500556_0003941_3630_4172 176
15 3300053108 Ga0500562_006359 Ga0500562_006359_1501_2043 176
16 3300053108 Ga0500562_016704 Ga0500562_016704_473_1018 176
17 3300053117 Ga0500593_112882 Ga0500593_112882_440_985 176
18 3300053156 Ga0500622_0025797 Ga0500622_0025797_816_1361 176
19 3300053730 Ga0500645_001015 Ga0500645_001015_3977_4522 176
20 3300053730 Ga0500645_002871 Ga0500645_002871_4675_5217 176
21 3300039062 Ga0400483_015030 Ga0400483_015030_618_1187 178
22 3300039062 Ga0400483_238794 Ga0400483_238794_263_832 178
23 iso_pu_bacteria 2599185354 2600200753 179
24 3300005333 Ga0070677_10010721 Ga0070677_100107214 180
25 3300009148 Ga0105243_10542407 Ga0105243_105424072 180
26 3300025893 Ga0207682_10013706 Ga0207682_100137064 180
27 3300039437 Ga0436365_0511712 Ga0436365_0511712_341_883 180
28 3300039437 Ga0436365_1514513 Ga0436365_1514513_29225_29767 180
29 iso_pu_bacteria 8057101203 8057101723 180
30 3300053087 Ga0500643_000937 Ga0500643_000937_6652_7224 182
31 3300053087 Ga0500643_004370 Ga0500643_004370_1657_2229 182
32 3300001990 JGI24737J22298_10003283 JGI24737J22298_100032836 183
33 3300002067 JGI24735J21928_10004486 JGI24735J21928_100044865 183
34 3300002067 JGI24735J21928_10013010 JGI24735J21928_100130102 183
35 3300002075 JGI24738J21930_10000040 JGI24738J21930_100000407 183
36 3300003214 JGI25165J46597_1000082 JGI25165J46597_100008228 183
37 3300003320 rootH2_10098945 rootH2_100989452 183
38 3300003763 Ga0055529_1014067 Ga0055529_10140672 183
39 3300005327 Ga0070658_10206758 Ga0070658_102067582 183
40 3300005457 Ga0070662_100003287 Ga0070662_1000032873 183
41 3300005548 Ga0070665_100327505 Ga0070665_1003275052 183
42 3300005563 Ga0068855_100185347 Ga0068855_1001853472 183
43 3300009093 Ga0105240_10170523 Ga0105240_101705234 183
44 3300013105 Ga0157369_10026119 Ga0157369_100261192 183
45 3300013307 Ga0157372_11401716 Ga0157372_114017162 183
46 3300025231 Ga0207427_100526 Ga0207427_1005266 183
47 3300025250 Ga0209026_1001371 Ga0209026_10013712 183
48 3300025254 Ga0209148_1001953 Ga0209148_10019534 183
49 3300025261 Ga0209233_1000041 Ga0209233_100004127 183
50 3300025272 Ga0209455_1005008 Ga0209455_10050082 183
51 3300025904 Ga0207647_10001149 Ga0207647_1000114917 183
52 3300025904 Ga0207647_10002065 Ga0207647_100020657 183
53 3300025909 Ga0207705_10159850 Ga0207705_101598503 183
54 3300025913 Ga0207695_10100815 Ga0207695_101008153 183
55 3300025913 Ga0207695_10162729 Ga0207695_101627292 183
56 3300025933 Ga0207706_10003421 Ga0207706_100034212 183
57 3300025949 Ga0207667_10061308 Ga0207667_100613083 183
58 3300028379 Ga0268266_10726428 Ga0268266_107264281 183
59 3300037312 Ga0395899_0003962 Ga0395899_0003962_10542_11099 183
60 3300037418 Ga0395900_0017530 Ga0395900_0017530_321_878 183
61 3300038443 Ga0395901_0553383 Ga0395901_0553383_192_749 183
62 3300042005 Ga0439448_0002148 Ga0439448_0002148_2857_3414 183
63 3300042157 Ga0439458_0000540 Ga0439458_0000540_2930_3487 183
64 3300046507 Ga0495606_0002456 Ga0495606_0002456_12972_13529 183
65 3300046507 Ga0495606_0285723 Ga0495606_0285723_331_888 183
66 3300046507 Ga0495606_0326711 Ga0495606_0326711_161_718 183
67 3300047472 Ga0495686_0001180 Ga0495686_0001180_14497_15054 183
68 3300048921 Ga0496118_0024653 Ga0496118_0024653_629_1186 183
69 3300048921 Ga0496118_0041099 Ga0496118_0041099_1308_1865 183
70 3300048924 Ga0496121_0025198 Ga0496121_0025198_3223_3780 183
71 3300048925 Ga0496122_0016436 Ga0496122_0016436_1668_2225 183
72 3300048926 Ga0496123_0008165 Ga0496123_0008165_8248_8805 183
73 3300048928 Ga0496125_0009861 Ga0496125_0009861_4611_5168 183
74 3300048929 Ga0496126_0070661 Ga0496126_0070661_1827_2384 183
75 3300053153 Ga0500616_0107763 Ga0500616_0107763_384_941 183
76 iso_pu_bacteria 2885429604 2885430094 183
77 3300005327 Ga0070658_10000533 Ga0070658_1000053327 184
78 3300005339 Ga0070660_100022503 Ga0070660_1000225035 184
79 3300005563 Ga0068855_100378338 Ga0068855_1003783382 184
80 3300009551 Ga0105238_10258851 Ga0105238_102588512 184
81 3300010375 Ga0105239_10758667 Ga0105239_107586672 184
82 3300025909 Ga0207705_10000314 Ga0207705_1000031415 184
83 3300025919 Ga0207657_10001001 Ga0207657_100010019 184
84 3300036401 Ga0373937_0764599 Ga0373937_0764599_22_579 184
85 3300005548 Ga0070665_100000773 Ga0070665_10000077334 185
86 3300021384 Ga0213876_10033240 Ga0213876_100332403 185
87 3300028379 Ga0268266_10000432 Ga0268266_1000043224 185
88 3300028381 Ga0268264_10105703 Ga0268264_101057033 185
89 3300038443 Ga0395901_0251462 Ga0395901_0251462_956_1516 185
90 3300039437 Ga0436365_1398144 Ga0436365_1398144_2066_2626 185
91 3300048929 Ga0496126_0373154 Ga0496126_0373154_116_676 185
92 3300053139 Ga0500568_0002318 Ga0500568_0002318_3321_3881 185
93 3300053151 Ga0500604_0000017 Ga0500604_0000017_65325_65885 185
94 3300053153 Ga0500616_0000711 Ga0500616_0000711_25677_26237 185
95 3300025925 Ga0207650_10239769 Ga0207650_102397692 186
96 3300031731 Ga0307405_10307886 Ga0307405_103078862 186
97 3300046492 Ga0495585_0229786 Ga0495585_0229786_32_592 186
98 3300049658 Ga0501211_002174 Ga0501211_002174_1084_1644 186
99 3300049669 Ga0501235_000658 Ga0501235_000658_5953_6513 186
100 3300002076 JGI24749J21850_1000218 JGI24749J21850_100021812 187
101 3300002459 JGI24751J29686_10000355 JGI24751J29686_1000035510 187
102 3300005295 Ga0065707_10127304 Ga0065707_101273042 187
103 3300005331 Ga0070670_100000005 Ga0070670_10000000510 187
104 3300005344 Ga0070661_100000011 Ga0070661_10000001150 187
105 3300005353 Ga0070669_100000119 Ga0070669_1000001198 187
106 3300005367 Ga0070667_100000407 Ga0070667_10000040747 187
107 3300005617 Ga0068859_100141628 Ga0068859_1001416283 187
108 3300005618 Ga0068864_100000011 Ga0068864_1000000118 187
109 3300005719 Ga0068861_100113021 Ga0068861_1001130212 187
110 3300005843 Ga0068860_100388104 Ga0068860_1003881042 187
111 3300005844 Ga0068862_100000011 Ga0068862_100000011226 187
112 3300005985 Ga0081539_10028125 Ga0081539_100281252 187
113 3300006931 Ga0097620_100141635 Ga0097620_1001416353 187
114 3300009177 Ga0105248_10000921 Ga0105248_1000092110 187
115 3300014326 Ga0157380_10001430 Ga0157380_100014302 187
116 3300020081 Ga0206354_11109695 Ga0206354_111096957 187
117 3300020082 Ga0206353_11073733 Ga0206353_110737335 187
118 3300021388 Ga0213875_10000893 Ga0213875_1000089317 187
119 3300025920 Ga0207649_10000221 Ga0207649_1000022149 187
120 3300025923 Ga0207681_10000001 Ga0207681_10000001649 187
121 3300025925 Ga0207650_10000018 Ga0207650_1000001811 187
122 3300025941 Ga0207711_10507447 Ga0207711_105074472 187
123 3300025972 Ga0207668_10014202 Ga0207668_100142024 187
124 3300025986 Ga0207658_10001469 Ga0207658_1000146914 187
125 3300026095 Ga0207676_10000004 Ga0207676_10000004404 187
126 3300026118 Ga0207675_100000119 Ga0207675_10000011967 187
127 3300028380 Ga0268265_10000002 Ga0268265_10000002666 187
128 3300028381 Ga0268264_10151426 Ga0268264_101514263 187
129 3300031548 Ga0307408_100185542 Ga0307408_1001855422 187
130 3300031548 Ga0307408_100658122 Ga0307408_1006581222 187
131 3300032005 Ga0307411_10200848 Ga0307411_102008482 187
132 3300037068 Ga0373925_0309347 Ga0373925_0309347_475_1041 187
133 3300037853 Ga0436364_1126870 Ga0436364_1126870_20067_20633 187
134 3300046522 Ga0495643_0041801 Ga0495643_0041801_1713_2279 187
135 3300046538 Ga0495609_0181358 Ga0495609_0181358_243_809 187
136 3300046660 Ga0495625_0161106 Ga0495625_0161106_382_948 187
137 3300046684 Ga0495669_0042191 Ga0495669_0042191_682_1248 187
138 3300046810 Ga0495660_0087855 Ga0495660_0087855_359_925 187
139 3300048928 Ga0496125_0074179 Ga0496125_0074179_1375_1944 187
140 3300049572 Ga0501036_1152872 Ga0501036_1152872_40_615 187
141 3300049579 Ga0501043_0006052 Ga0501043_0006052_3364_3939 187
142 3300049581 Ga0501047_0006687 Ga0501047_0006687_5453_6028 187
143 3300049582 Ga0501048_0080642 Ga0501048_0080642_89_664 187
144 3300053091 Ga0500647_0004525 Ga0500647_0004525_4655_5221 187
145 3300053093 Ga0500651_0055350 Ga0500651_0055350_545_1111 187
146 3300053096 Ga0500641_0039372 Ga0500641_0039372_26_592 187
147 3300053123 Ga0500614_008093 Ga0500614_008093_288_854 187
148 3300053125 Ga0500618_014052 Ga0500618_014052_758_1324 187
149 3300053130 Ga0500642_0001690 Ga0500642_0001690_3753_4319 187
150 3300053133 Ga0500655_000092 Ga0500655_000092_18580_19146 187
151 3300053142 Ga0500577_0045150 Ga0500577_0045150_564_1130 187
152 3300053148 Ga0500590_019970 Ga0500590_019970_243_809 187
153 3300053156 Ga0500622_0032676 Ga0500622_0032676_654_1220 187
154 3300053163 Ga0500639_028485 Ga0500639_028485_1460_2026 187
155 3300053177 Ga0500636_0137835 Ga0500636_0137835_321_887 187
156 3300053177 Ga0500636_0292850 Ga0500636_0292850_133_699 187
157 3300053724 Ga0500570_004853 Ga0500570_004853_5398_5964 187
158 3300053733 Ga0500552_005089 Ga0500552_005089_127_693 187
159 3300001915 JGI24741J21665_1000307 JGI24741J21665_100030712 188
160 3300001979 JGI24740J21852_10004318 JGI24740J21852_100043187 188
161 3300001989 JGI24739J22299_10003214 JGI24739J22299_100032145 188
162 3300001989 JGI24739J22299_10003845 JGI24739J22299_100038453 188
163 3300001990 JGI24737J22298_10001695 JGI24737J22298_100016957 188
164 3300001990 JGI24737J22298_10058960 JGI24737J22298_100589601 188
165 3300002067 JGI24735J21928_10007509 JGI24735J21928_100075093 188
166 3300002075 JGI24738J21930_10005661 JGI24738J21930_100056613 188
167 3300002075 JGI24738J21930_10006208 JGI24738J21930_100062083 188
168 3300003215 JGI25153J46596_10033285 JGI25153J46596_100332852 188
169 3300003773 Ga0055537_1001376 Ga0055537_10013765 188
170 3300003775 Ga0055524_1000180 Ga0055524_100018039 188
171 3300003791 Ga0055530_10000061 Ga0055530_1000006173 188
172 3300003791 Ga0055530_10005367 Ga0055530_100053672 188
173 3300003794 Ga0055531_10000035 Ga0055531_10000035105 188
174 3300005262 Ga0065165_1004171 Ga0065165_10041716 188
175 3300005262 Ga0065165_1011976 Ga0065165_10119762 188
176 3300005262 Ga0065165_1022888 Ga0065165_10228882 188
177 3300005327 Ga0070658_10147136 Ga0070658_101471362 188
178 3300005331 Ga0070670_100057808 Ga0070670_1000578083 188
179 3300005339 Ga0070660_100026286 Ga0070660_1000262865 188
180 3300005339 Ga0070660_100959157 Ga0070660_1009591571 188
181 3300005345 Ga0070692_10031768 Ga0070692_100317684 188
182 3300005455 Ga0070663_100852422 Ga0070663_1008524221 188
183 3300005457 Ga0070662_100009204 Ga0070662_1000092047 188
184 3300005466 Ga0070685_10036456 Ga0070685_100364562 188
185 3300005539 Ga0068853_100001339 Ga0068853_10000133911 188
186 3300005539 Ga0068853_101381796 Ga0068853_1013817961 188
187 3300005543 Ga0070672_100318356 Ga0070672_1003183562 188
188 3300005563 Ga0068855_100057849 Ga0068855_1000578493 188
189 3300005564 Ga0070664_100002181 Ga0070664_1000021813 188
190 3300005578 Ga0068854_100079050 Ga0068854_1000790503 188
191 3300005614 Ga0068856_100086110 Ga0068856_1000861102 188
192 3300005616 Ga0068852_100381492 Ga0068852_1003814921 188
193 3300005617 Ga0068859_100010149 Ga0068859_1000101494 188
194 3300005617 Ga0068859_100046310 Ga0068859_1000463106 188
195 3300005834 Ga0068851_10051085 Ga0068851_100510853 188
196 3300005841 Ga0068863_100025449 Ga0068863_1000254498 188
197 3300005843 Ga0068860_100001110 Ga0068860_10000111031 188
198 3300005844 Ga0068862_100000125 Ga0068862_10000012571 188
199 3300006353 Ga0075370_10358151 Ga0075370_103581511 188
200 3300006880 Ga0075429_100216454 Ga0075429_1002164542 188
201 3300006931 Ga0097620_100010149 Ga0097620_1000101494 188
202 3300006931 Ga0097620_100046310 Ga0097620_1000463106 188
203 3300009101 Ga0105247_10018879 Ga0105247_100188794 188
204 3300009174 Ga0105241_10002180 Ga0105241_100021805 188
205 3300009545 Ga0105237_10009454 Ga0105237_1000945410 188
206 3300009545 Ga0105237_10023140 Ga0105237_100231403 188
207 3300009551 Ga0105238_10014105 Ga0105238_1001410510 188
208 3300009553 Ga0105249_10000015 Ga0105249_10000015186 188
209 3300013100 Ga0157373_10027445 Ga0157373_100274454 188
210 3300013102 Ga0157371_10057869 Ga0157371_100578693 188
211 3300013104 Ga0157370_10020245 Ga0157370_100202452 188
212 3300013105 Ga0157369_10451381 Ga0157369_104513812 188
213 3300013307 Ga0157372_10107353 Ga0157372_101073533 188
214 3300013307 Ga0157372_10778411 Ga0157372_107784112 188
215 3300021377 Ga0213874_10051551 Ga0213874_100515511 188
216 3300025233 Ga0209437_105635 Ga0209437_1056352 188
217 3300025245 Ga0207425_1002591 Ga0207425_10025916 188
218 3300025261 Ga0209233_1000058 Ga0209233_1000058229 188
219 3300025263 Ga0209565_1000012 Ga0209565_1000012210 188
220 3300025273 Ga0209673_1005653 Ga0209673_10056532 188
221 3300025297 Ga0209758_1002916 Ga0209758_100291611 188
222 3300025298 Ga0209050_1000014 Ga0209050_1000014468 188
223 3300025298 Ga0209050_1002236 Ga0209050_100223610 188
224 3300025299 Ga0209256_1000012 Ga0209256_1000012401 188
225 3300025304 Ga0209257_1000019 Ga0209257_1000019224 188
226 3300025304 Ga0209257_1001431 Ga0209257_100143116 188
227 3300025304 Ga0209257_1006564 Ga0209257_10065644 188
228 3300025321 Ga0207656_10042755 Ga0207656_100427552 188
229 3300025321 Ga0207656_10432649 Ga0207656_104326491 188
230 3300025900 Ga0207710_10003527 Ga0207710_100035273 188
231 3300025904 Ga0207647_10004587 Ga0207647_100045878 188
232 3300025904 Ga0207647_10062655 Ga0207647_100626553 188
233 3300025907 Ga0207645_10353136 Ga0207645_103531362 188
234 3300025911 Ga0207654_10014074 Ga0207654_100140745 188
235 3300025914 Ga0207671_10013325 Ga0207671_100133252 188
236 3300025919 Ga0207657_10008563 Ga0207657_100085634 188
237 3300025924 Ga0207694_10047346 Ga0207694_100473465 188
238 3300025924 Ga0207694_10125361 Ga0207694_101253613 188
239 3300025924 Ga0207694_10303334 Ga0207694_103033342 188
240 3300025932 Ga0207690_10357445 Ga0207690_103574452 188
241 3300025933 Ga0207706_10017521 Ga0207706_100175213 188
242 3300025933 Ga0207706_10018544 Ga0207706_100185446 188
243 3300025937 Ga0207669_10074604 Ga0207669_100746042 188
244 3300025945 Ga0207679_10115317 Ga0207679_101153173 188
245 3300025949 Ga0207667_10232111 Ga0207667_102321113 188
246 3300025961 Ga0207712_10000023 Ga0207712_1000002399 188
247 3300025981 Ga0207640_10064507 Ga0207640_100645073 188
248 3300025981 Ga0207640_10124520 Ga0207640_101245202 188
249 3300026041 Ga0207639_10002701 Ga0207639_100027014 188
250 3300026041 Ga0207639_10027189 Ga0207639_100271892 188
251 3300026041 Ga0207639_11301054 Ga0207639_113010542 188
252 3300026067 Ga0207678_10002436 Ga0207678_1000243613 188
253 3300026078 Ga0207702_10004659 Ga0207702_1000465911 188
254 3300026116 Ga0207674_10006918 Ga0207674_1000691810 188
255 3300026116 Ga0207674_10030243 Ga0207674_100302434 188
256 3300026142 Ga0207698_10113565 Ga0207698_101135653 188
257 3300028380 Ga0268265_10000049 Ga0268265_10000049166 188
258 3300028381 Ga0268264_10000682 Ga0268264_100006828 188
259 3300031456 Ga0307513_10019453 Ga0307513_100194533 188
260 3300031548 Ga0307408_100003756 Ga0307408_1000037562 188
261 3300031548 Ga0307408_100357804 Ga0307408_1003578042 188
262 3300031731 Ga0307405_10019930 Ga0307405_100199305 188
263 3300031731 Ga0307405_10187458 Ga0307405_101874582 188
264 3300031824 Ga0307413_10345336 Ga0307413_103453362 188
265 3300031824 Ga0307413_10896794 Ga0307413_108967941 188
266 3300031901 Ga0307406_10023032 Ga0307406_100230323 188
267 3300031911 Ga0307412_10176932 Ga0307412_101769323 188
268 3300031911 Ga0307412_11172431 Ga0307412_111724311 188
269 3300031995 Ga0307409_100838387 Ga0307409_1008383872 188
270 3300032004 Ga0307414_10040823 Ga0307414_100408231 188
271 3300032004 Ga0307414_10418192 Ga0307414_104181922 188
272 3300033180 Ga0307510_10002694 Ga0307510_1000269418 188
273 3300046453 Ga0495627_000079 Ga0495627_000079_14010_14576 188
274 3300046524 Ga0495648_0014243 Ga0495648_0014243_4588_5154 188
275 3300046525 Ga0495663_0031571 Ga0495663_0031571_714_1280 188
276 3300046558 Ga0495633_0072093 Ga0495633_0072093_446_1012 188
277 3300046660 Ga0495625_0000091 Ga0495625_0000091_12334_12900 188
278 3300047469 Ga0495673_0051758 Ga0495673_0051758_1063_1629 188
279 3300047472 Ga0495686_0001594 Ga0495686_0001594_10998_11570 188
280 3300047472 Ga0495686_0046687 Ga0495686_0046687_1444_2010 188
281 3300048907 Ga0496104_0741018 Ga0496104_0741018_30_596 188
282 3300048911 Ga0496108_0462766 Ga0496108_0462766_333_899 188
283 3300048912 Ga0496109_0134956 Ga0496109_0134956_824_1390 188
284 3300048913 Ga0496110_0020251 Ga0496110_0020251_2235_2801 188
285 3300048916 Ga0496113_0197568 Ga0496113_0197568_243_809 188
286 3300048919 Ga0496116_0149703 Ga0496116_0149703_408_974 188
287 3300048927 Ga0496124_0099771 Ga0496124_0099771_1655_2221 188
288 3300048928 Ga0496125_0128542 Ga0496125_0128542_240_806 188
289 3300049569 Ga0501032_0354721 Ga0501032_0354721_124_708 188
290 3300049574 Ga0501038_0391104 Ga0501038_0391104_287_871 188
291 3300053087 Ga0500643_000241 Ga0500643_000241_35149_35718 188

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06938

DUF1285_N

Domain of unknown function (DUF1285), N-terminal domain

47

114

0.99

PF21028

DUF1285_C

Protein of unknown function (DUF1285), C-terminal domain

115

204

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2re3-assembly1.cif.gz_A crystal structure of a duf1285 family protein (spo_0140) from silicibacter pomeroyi dss-3 at 2.50 a resolution 0.8688 13 184
2ra9-assembly1.cif.gz_A crystal structure of a duf1285 family protein (sbal_2486) from shewanella baltica os155 at 1.40 a resolution 0.8176 42 163
2re3-assembly1.cif.gz_A crystal structure of a duf1285 family protein (spo_0140) from silicibacter pomeroyi dss-3 at 2.50 a resolution 0.8138 13 184
6vgj-assembly3.cif.gz_C n-terminal variant of cxcl13 0.7594 98 126
2ra9-assembly1.cif.gz_A crystal structure of a duf1285 family protein (sbal_2486) from shewanella baltica os155 at 1.40 a resolution 0.7347 42 163
ID Description Score Start End Superfamily
2re3B02 Mainly Beta;Roll;duf1285 protein fold;duf1285 protein 0.9111 94 161 2.30.270.10
2re3B02 Mainly Beta;Roll;duf1285 protein fold;duf1285 protein 0.8862 94 161 2.30.270.10
2re3B01 Alpha Beta;Roll;duf1285 like fold;duf1285 like domain 0.8051 13 93 3.10.540.10
2re3B01 Alpha Beta;Roll;duf1285 like fold;duf1285 like domain 0.7674 13 93 3.10.540.10
af_Q9WVL7_24_91_2.40.50.40 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.7306 100 127 2.40.50.40
ID Description Score Start End GO Terms
AF-T0G2E9-F1-model_v4 Proteophosphoglycan 0.9909 1 188
AF-T0G2E9-F1-model_v4 Proteophosphoglycan 0.9857 1 188
AF-A0A031HUP7-F1-model_v4 Proteophosphoglycan 0.984 1 184
AF-A0A520HHM8-F1-model_v4 DUF1285 domain-containing protein 0.9821 1 117
AF-A0A2W5DZU1-F1-model_v4 deleted 0.9795 62 188

Feature Viewer

pLDDT pTM Quality
93.15 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map