F389972

General Info

Members Datasets Scaffolds Average Seq Length
290 185 289 412

Family's Representative Sequence

Representative Sequence 3300046664|Ga0495659_0000982|Ga0495659_0000982_5408_6775
Length 455
Sequence MPARIRVGLLGCGVVGGGLVRLLEARARAVEHAVGAPVAVTRLAVRDKSRRREVPLKGVEIGTDPMEVANAPDVDVLVELMGGAETAFPPVMRALQRGLPVVTANKLLISVHGAELDAAAAASGAPLRYEASVAGVIPVLQALDHGLRTERFTLLVGILNGTTNYILSTMEREGRDFEEALTAARELGYAEADPTLDLSGADTAQKLTILARRAFQAAVPHESIPTEGIVGIELEDLRQADRFGYIVKLLGIGLRSSEGLDLRVHPAFIPKRYLLASVRDEFNGVYLRGEASGSMLLYGKGAGALPTAQAVLGDVINVSRELLLRGITERETVGAGGGSLREADAAWPRPATTAKKASALPADDERLPLDEVRTKYYLRLTVEDQPGVLAQIAHRLGASRVSVAQMHQAPSVRGQAAITMMTHETRDKDAREAVAAIKSLPTVLKGPRAIRIFDL

Samples

Sample ID Description Type Environment
1 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
89 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
90 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
93 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
101 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
129 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
135 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
142 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
185 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.34
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.83
Nodule 0
Rhizoplane 7.59
Rhizosphere 86.9
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000086 3300001977 Bacteria 10115
2 Ga0068869_100200307 3300005334 Bacteria 1574
3 Ga0070680_100140297 3300005336 Bacteria 2026
4 Ga0068868_100000104 3300005338 Bacteria 52249
5 Ga0068868_100112244 3300005338 Bacteria 2216
6 Ga0068868_100224945 3300005338 Bacteria 1572
7 Ga0070689_100040458 3300005340 Bacteria 3574
8 Ga0070691_10000275 3300005341 Bacteria 17919
9 Ga0070674_100000019 3300005356 Bacteria 89350
10 Ga0070674_100000030 3300005356 Bacteria 69481
11 Ga0070688_100000316 3300005365 Bacteria 24693
12 Ga0070659_100147258 3300005366 Bacteria 1919
13 Ga0070703_10008962 3300005406 Bacteria 2821
14 Ga0070703_10026410 3300005406 Archaea 1726
15 Ga0070714_100123099 3300005435 Bacteria 2309
16 Ga0070714_100165140 3300005435 Bacteria 2006
17 Ga0070713_100000023 3300005436 Bacteria 98528
18 Ga0070711_100004207 3300005439 Bacteria 8459
19 Ga0070705_100018928 3300005440 Bacteria 3616
20 Ga0070700_100087183 3300005441 Bacteria 2028
21 Ga0070662_100000001 3300005457 Bacteria 317995
22 Ga0070685_10000032 3300005466 Bacteria 84253
23 Ga0070706_100005988 3300005467 Bacteria 11497
24 Ga0070707_100080301 3300005468 Bacteria 3148
25 Ga0070699_100001136 3300005518 Bacteria 24733
26 Ga0070699_100116214 3300005518 Bacteria 2351
27 Ga0070684_100108041 3300005535 Bacteria 2493
28 Ga0070697_100258355 3300005536 Bacteria 1491
29 Ga0070695_100029348 3300005545 Bacteria 3417
30 Ga0070695_100102943 3300005545 Bacteria 1926
31 Ga0070696_100000409 3300005546 Bacteria 26728
32 Ga0070696_100017612 3300005546 Bacteria 4823
33 Ga0070696_100059549 3300005546 Bacteria 2669
34 Ga0070704_100230777 3300005549 Bacteria 1510
35 Ga0068856_100035528 3300005614 Bacteria 4885
36 Ga0068852_100000037 3300005616 Bacteria 97602
37 Ga0068859_100000736 3300005617 Bacteria 32973
38 Ga0068864_100000043 3300005618 Bacteria 162928
39 Ga0068864_100029734 3300005618 Bacteria 4629
40 Ga0068866_10000382 3300005718 Bacteria 20838
41 Ga0068866_10093612 3300005718 Bacteria 1642
42 Ga0068863_100002888 3300005841 Bacteria 17015
43 Ga0068863_100105341 3300005841 Bacteria 2683
44 Ga0068858_100000017 3300005842 Bacteria 186913
45 Ga0081455_10025005 3300005937 Bacteria 5518
46 Ga0081538_10000045 3300005981 Bacteria 114622
47 Ga0075365_10001163 3300006038 Bacteria 11550
48 Ga0075365_10007643 3300006038 Bacteria 6074
49 Ga0075365_10036562 3300006038 Bacteria 3182
50 Ga0075365_10091521 3300006038 Bacteria 2073
51 Ga0075365_10141439 3300006038 Bacteria 1670
52 Ga0075364_10036609 3300006051 Bacteria 3174
53 Ga0075364_10088154 3300006051 Bacteria 2057
54 Ga0075364_10110471 3300006051 Bacteria 1834
55 Ga0075428_100017404 3300006844 Bacteria 7945
56 Ga0075428_100326368 3300006844 Bacteria 1649
57 Ga0075430_100026848 3300006846 Bacteria 4897
58 Ga0075431_100000747 3300006847 Bacteria 28086
59 Ga0075431_100023665 3300006847 Bacteria 6288
60 Ga0075431_100091739 3300006847 Bacteria 3135
61 Ga0075431_100232936 3300006847 Bacteria 1876
62 Ga0075433_10000021 3300006852 Bacteria 60563
63 Ga0075433_10000553 3300006852 Bacteria 24618
64 Ga0075433_10007173 3300006852 Bacteria 8827
65 Ga0075433_10007683 3300006852 Bacteria 8564
66 Ga0075433_10192941 3300006852 Bacteria 1812
67 Ga0075433_10201414 3300006852 Bacteria 1770
68 Ga0075434_100001171 3300006871 Bacteria 21716
69 Ga0075434_100008408 3300006871 Bacteria 9597
70 Ga0075434_100028328 3300006871 Bacteria 5502
71 Ga0075429_100012152 3300006880 Bacteria 7463
72 Ga0068865_100000081 3300006881 Bacteria 51047
73 Ga0075436_100000826 3300006914 Bacteria 20629
74 Ga0075436_100019828 3300006914 Bacteria 4611
75 Ga0097620_100000736 3300006931 Bacteria 32973
76 Ga0075435_100000298 3300007076 Bacteria 30730
77 Ga0075435_100112925 3300007076 Bacteria 2261
78 Ga0111539_10015259 3300009094 Bacteria 9567
79 Ga0111539_10025139 3300009094 Bacteria 7300
80 Ga0105245_10000249 3300009098 Bacteria 51282
81 Ga0105245_10000330 3300009098 Bacteria 44516
82 Ga0105245_10087597 3300009098 Bacteria 2858
83 Ga0114129_10036729 3300009147 Bacteria 6917
84 Ga0114129_10084255 3300009147 Bacteria 4414
85 Ga0105248_10000017 3300009177 Bacteria 298089
86 Ga0105248_10018907 3300009177 Bacteria 7618
87 Ga0105249_10000054 3300009553 Bacteria 162883
88 Ga0105239_10024700 3300010375 Bacteria 6619
89 Ga0157371_10007427 3300013102 Bacteria 8875
90 Ga0157370_10056159 3300013104 Bacteria 3747
91 Ga0157369_10000105 3300013105 Bacteria 117996
92 Ga0163162_10065874 3300013306 Bacteria 3671
93 Ga0163162_10145397 3300013306 Bacteria 2487
94 Ga0157380_10035572 3300014326 Bacteria 3848
95 Ga0157380_10057439 3300014326 Bacteria 3099
96 Ga0157379_10056220 3300014968 Bacteria 3516
97 Ga0163161_10000240 3300017792 Bacteria 49520
98 Ga0206356_11454333 3300020070 Bacteria 1735
99 Ga0207653_10012313 3300025885 Bacteria 2670
100 Ga0207642_10000500 3300025899 Bacteria 12040
101 Ga0207642_10044533 3300025899 Bacteria 1965
102 Ga0207684_10081050 3300025910 Bacteria 2761
103 Ga0207663_10002113 3300025916 Bacteria 9474
104 Ga0207663_10207164 3300025916 Unclassified 1418
105 Ga0207646_10060211 3300025922 Bacteria 3391
106 Ga0207681_10083782 3300025923 Bacteria 2258
107 Ga0207687_10000106 3300025927 Bacteria 61275
108 Ga0207700_10000003 3300025928 Bacteria 500797
109 Ga0207664_10143283 3300025929 Bacteria 2024
110 Ga0207664_10155382 3300025929 Bacteria 1947
111 Ga0207706_10000003 3300025933 Bacteria 345011
112 Ga0207686_10000035 3300025934 Bacteria 130483
113 Ga0207670_10067247 3300025936 Bacteria 2465
114 Ga0207669_10000029 3300025937 Bacteria 88351
115 Ga0207704_10000018 3300025938 Bacteria 153994
116 Ga0207665_10065366 3300025939 Bacteria 2473
117 Ga0207691_10138833 3300025940 Bacteria 2143
118 Ga0207711_10000011 3300025941 Bacteria 518817
119 Ga0207711_10070955 3300025941 Bacteria 3021
120 Ga0207689_10212290 3300025942 Bacteria 1599
121 Ga0207712_10000032 3300025961 Bacteria 210628
122 Ga0207677_10000479 3300026023 Bacteria 26103
123 Ga0207677_10103681 3300026023 Bacteria 2100
124 Ga0207703_10000030 3300026035 Bacteria 199014
125 Ga0207703_10003719 3300026035 Bacteria 12695
126 Ga0207708_10167455 3300026075 Bacteria 1738
127 Ga0207708_10200298 3300026075 Bacteria 1593
128 Ga0207702_10003965 3300026078 Bacteria 13291
129 Ga0207676_10000042 3300026095 Bacteria 163475
130 Ga0207675_100015600 3300026118 Bacteria 7086
131 Ga0207698_10000015 3300026142 Bacteria 207368
132 Ga0207698_10199122 3300026142 Bacteria 1792
133 Ga0265337_1000101 3300028556 Bacteria 42173
134 Ga0265326_10000033 3300028558 Bacteria 91972
135 Ga0265319_1000544 3300028563 Bacteria 25627
136 Ga0265322_10000005 3300028654 Bacteria 246112
137 Ga0265336_10025123 3300028666 Bacteria 1877
138 Ga0265324_10000207 3300029957 Bacteria 44991
139 Ga0265328_10001194 3300031239 Bacteria 12029
140 Ga0265320_10000010 3300031240 Bacteria 250501
141 Ga0265320_10073585 3300031240 Bacteria 1605
142 Ga0265339_10026670 3300031249 Bacteria 3308
143 Ga0265331_10000869 3300031250 Bacteria 24602
144 Ga0265327_10000040 3300031251 Bacteria 291052
145 Ga0265314_10000208 3300031711 Bacteria 86855
146 Ga0265342_10112281 3300031712 Bacteria 1541
147 Ga0316576_10003053 3300031727 Bacteria 9742
148 Ga0307407_10121628 3300031903 Bacteria 1656
149 Ga0307415_100008232 3300032126 Bacteria 5770
150 Ga0373937_0225605 3300036401 Bacteria 1764
151 Ga0395900_0007489 3300037418 Bacteria 11275
152 Ga0395898_0017304 3300037466 Bacteria 7364
153 Ga0395898_0046905 3300037466 Bacteria 4243
154 Ga0395905_0006892 3300037471 Bacteria 11360
155 Ga0395901_0004047 3300038443 Bacteria 14767
156 Ga0395901_0070917 3300038443 Bacteria 3630
157 Ga0395901_0186233 3300038443 Bacteria 2177
158 Ga0451577_0053868 3300042876 Bacteria 3591
159 Ga0451577_0057678 3300042876 Bacteria 3461
160 Ga0466963_0000012 3300044694 Bacteria 62839
161 Ga0466963_0032248 3300044694 Bacteria 3391
162 Ga0453684_0320916 3300044712 Unclassified 1754
163 Ga0453684_0359358 3300044712 Bacteria 1640
164 Ga0466957_0004548 3300044842 Bacteria 7745
165 Ga0466957_0191282 3300044842 Bacteria 1341
166 Ga0451576_0004460 3300045051 Bacteria 18151
167 Ga0451576_0150086 3300045051 Bacteria 2431
168 Ga0466967_0053962 3300045976 Bacteria 3535
169 Ga0466967_0069342 3300045976 Bacteria 3151
170 Ga0466967_0181732 3300045976 Bacteria 1984
171 Ga0495629_0012421 3300046459 Bacteria 6167
172 Ga0495629_0014825 3300046459 Bacteria 5606
173 Ga0495653_0013362 3300046463 Bacteria 6691
174 Ga0495582_0000002 3300046473 Bacteria 219909
175 Ga0495639_0008837 3300046475 Bacteria 4321
176 Ga0495662_0000130 3300046476 Bacteria 28303
177 Ga0495608_0000013 3300046511 Bacteria 228481
178 Ga0495608_0000346 3300046511 Bacteria 32424
179 Ga0495608_0108909 3300046511 Bacteria 1782
180 Ga0495618_0000218 3300046514 Bacteria 41741
181 Ga0495628_0036439 3300046516 Bacteria 3948
182 Ga0495630_0001724 3300046517 Bacteria 15254
183 Ga0495630_0003792 3300046517 Bacteria 10541
184 Ga0495644_0001063 3300046523 Bacteria 11437
185 Ga0495640_0020061 3300046533 Bacteria 4927
186 Ga0495586_0063940 3300046535 Bacteria 2005
187 Ga0495587_0001663 3300046536 Bacteria 14848
188 Ga0495598_0035441 3300046537 Bacteria 1428
189 Ga0495621_0010327 3300046539 Bacteria 2852
190 Ga0495645_0021391 3300046543 Bacteria 4675
191 Ga0495667_0000019 3300046559 Bacteria 181645
192 Ga0495634_0001012 3300046642 Bacteria 26406
193 Ga0495634_0073903 3300046642 Bacteria 2241
194 Ga0495635_0008494 3300046663 Bacteria 7174
195 Ga0495659_0000982 3300046664 Bacteria 9992
196 Ga0495657_0000003 3300046675 Bacteria 279680
197 Ga0495657_0007033 3300046675 Bacteria 8727
198 Ga0495657_0058393 3300046675 Bacteria 2562
199 Ga0495658_0000001 3300046683 Bacteria 385362
200 Ga0495658_0000378 3300046683 Bacteria 24970
201 Ga0495658_0002902 3300046683 Bacteria 8612
202 Ga0495670_0017390 3300046691 Bacteria 3537
203 Ga0495600_0000652 3300046809 Bacteria 18003
204 Ga0495600_0046515 3300046809 Bacteria 2831
205 Ga0495604_0000104 3300047317 Bacteria 71390
206 Ga0495674_0000024 3300047319 Bacteria 141746
207 Ga0495676_0037445 3300047321 Bacteria 4037
208 Ga0495680_0007564 3300047322 Bacteria 9935
209 Ga0495680_0115715 3300047322 Bacteria 1984
210 Ga0495675_0000094 3300047444 Bacteria 63338
211 Ga0495675_0022797 3300047444 Bacteria 3992
212 Ga0496102_0000438 3300048905 Bacteria 47526
213 Ga0496103_0000001 3300048906 Bacteria 643471
214 Ga0496104_0000008 3300048907 Bacteria 516976
215 Ga0496104_0000034 3300048907 Bacteria 186572
216 Ga0496105_0000003 3300048908 Bacteria 713251
217 Ga0496105_0000386 3300048908 Bacteria 28919
218 Ga0496108_0000349 3300048911 Bacteria 39032
219 Ga0496108_0007713 3300048911 Bacteria 8717
220 Ga0496108_0024518 3300048911 Bacteria 4967
221 Ga0496109_0000307 3300048912 Bacteria 46191
222 Ga0496109_0000333 3300048912 Bacteria 44006
223 Ga0496109_0105222 3300048912 Bacteria 2621
224 Ga0496110_0004422 3300048913 Bacteria 10888
225 Ga0496110_0030487 3300048913 Bacteria 4650
226 Ga0496110_0042435 3300048913 Bacteria 3970
227 Ga0496111_0000130 3300048914 Bacteria 33124
228 Ga0496111_0254446 3300048914 Bacteria 1303
229 Ga0496112_0000002 3300048915 Bacteria 782039
230 Ga0496113_0000017 3300048916 Bacteria 74327
231 Ga0496113_0000787 3300048916 Bacteria 16425
232 Ga0496115_0000022 3300048918 Bacteria 164224
233 Ga0496115_0019181 3300048918 Bacteria 5261
234 Ga0496121_0002858 3300048924 Bacteria 25455
235 Ga0496124_0135170 3300048927 Bacteria 1953
236 Ga0501034_0006344 3300049571 Bacteria 12740
237 Ga0501034_0261189 3300049571 Bacteria 1674
238 Ga0501036_0153837 3300049572 Bacteria 1940
239 Ga0501039_0027933 3300049575 Bacteria 4340
240 Ga0501040_0076271 3300049576 Bacteria 2318
241 Ga0501041_0087404 3300049577 Bacteria 1924
242 Ga0501042_0011248 3300049578 Bacteria 6032
243 Ga0501042_0023256 3300049578 Bacteria 4335
244 Ga0501042_0103639 3300049578 Bacteria 2047
245 Ga0501047_0030508 3300049581 Bacteria 5197
246 Ga0501067_0046474 3300049583 Bacteria 2410
247 Ga0501074_0112834 3300049590 Bacteria 1945
248 Ga0501075_0008072 3300049591 Bacteria 7320
249 Ga0501081_0047606 3300049743 Bacteria 2950
250 Ga0501081_0149073 3300049743 Bacteria 1680
251 Ga0501045_0100158 3300049824 Bacteria 2145
252 nmdc:mga00v17_36153_c1 3300050491 Bacteria 2942
253 nmdc:mga00v17_63205_c1 3300050491 Bacteria 2279
254 nmdc:mga0yw44_10795_c1 3300050492 Bacteria 4681
255 nmdc:mga0yw44_17975_c1 3300050492 Bacteria 3862
256 nmdc:mga0yw44_77202_c1 3300050492 Bacteria 2080
257 nmdc:mga05p37_94246_c1 3300050507 Bacteria 3689
258 nmdc:mga09592_9222_c1 3300050508 Bacteria 8025
259 nmdc:mga0qj67_372_c1 3300050509 Bacteria 30883
260 nmdc:mga06r32_24591_c1 3300050510 Bacteria 5594
261 nmdc:mga06r32_57758_c1 3300050510 Bacteria 3728
262 nmdc:mga06r32_93028_c1 3300050510 Bacteria 2948
263 nmdc:mga06r32_99254_c1 3300050510 Bacteria 2855
264 nmdc:mga08y16_38509_c1 3300050511 Bacteria 5021
265 nmdc:mga08y16_38545_c1 3300050511 Bacteria 5018
266 nmdc:mga0n895_1035_c1 3300050512 Bacteria 20230
267 nmdc:mga0n895_11286_c1 3300050512 Bacteria 7962
268 nmdc:mga0n895_27864_c2 3300050512 Bacteria 1951
269 nmdc:mga0rr50_623_c1 3300050513 Bacteria 19012
270 nmdc:mga08x19_5922_c1 3300050514 Bacteria 7232
271 nmdc:mga0a205_1461_c1 3300050515 Bacteria 20140
272 nmdc:mga0a205_146416_c1 3300050515 Bacteria 2262
273 nmdc:mga0a205_198951_c1 3300050515 Bacteria 1895
274 nmdc:mga0a205_31719_c1 3300050515 Bacteria 5064
275 nmdc:mga0a205_4_c1 3300050515 Bacteria 168154
276 nmdc:mga0a205_83_c1 3300050515 Bacteria 52257
277 Ga0495601_0003822 3300053077 Bacteria 8663
278 Ga0495601_0006771 3300053077 Bacteria 6714
279 Ga0495601_0017400 3300053077 Bacteria 4362
280 Ga0495612_0002233 3300053078 Bacteria 7962
281 Ga0495595_0000007 3300053084 Bacteria 228504
282 Ga0495595_0000148 3300053084 Bacteria 28375
283 Ga0495619_0000001 3300053085 Bacteria 586054
284 Ga0495619_0000413 3300053085 Bacteria 29033
285 Ga0495619_0000747 3300053085 Bacteria 21190
286 Ga0495619_0001241 3300053085 Bacteria 16706
287 Ga0495619_0003870 3300053085 Bacteria 9621
288 Ga0500566_0052922 3300053094 Bacteria 2318
289 Ga0501084_0162875 3300054114 Archaea 1882

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044842 Ga0466957_0191282 Ga0466957_0191282_17_1009 327
2 3300046537 Ga0495598_0035441 Ga0495598_0035441_386_1417 333
3 3300048914 Ga0496111_0254446 Ga0496111_0254446_193_1290 365
4 3300028563 Ga0265319_1000544 Ga0265319_100054415 372
5 3300031240 Ga0265320_10073585 Ga0265320_100735852 372
6 3300009094 Ga0111539_10025139 Ga0111539_100251395 378
7 3300037466 Ga0395898_0046905 Ga0395898_0046905_2145_3374 378
8 3300038443 Ga0395901_0070917 Ga0395901_0070917_117_1346 378
9 3300050510 nmdc:mga06r32_57758_c1 nmdc:mga06r32_57758_c1_2364_3500 378
10 3300050511 nmdc:mga08y16_38545_c1 nmdc:mga08y16_38545_c1_1623_2759 378
11 3300050512 nmdc:mga0n895_27864_c2 nmdc:mga0n895_27864_c2_63_1199 378
12 3300050515 nmdc:mga0a205_146416_c1 nmdc:mga0a205_146416_c1_1006_2142 378
13 3300005981 Ga0081538_10000045 Ga0081538_1000004533 381
14 3300005536 Ga0070697_100258355 Ga0070697_1002583552 383
15 3300042876 Ga0451577_0053868 Ga0451577_0053868_1313_2605 387
16 3300044712 Ga0453684_0359358 Ga0453684_0359358_182_1474 387
17 3300005435 Ga0070714_100123099 Ga0070714_1001230992 388
18 3300005468 Ga0070707_100080301 Ga0070707_1000803013 388
19 3300006847 Ga0075431_100091739 Ga0075431_1000917392 388
20 3300025922 Ga0207646_10060211 Ga0207646_100602112 388
21 3300025929 Ga0207664_10155382 Ga0207664_101553822 388
22 3300048912 Ga0496109_0105222 Ga0496109_0105222_536_1762 388
23 3300048913 Ga0496110_0030487 Ga0496110_0030487_2250_3476 388
24 3300050510 nmdc:mga06r32_93028_c1 nmdc:mga06r32_93028_c1_509_1735 388
25 3300005340 Ga0070689_100040458 Ga0070689_1000404582 391
26 3300005439 Ga0070711_100004207 Ga0070711_1000042077 391
27 3300005617 Ga0068859_100000736 Ga0068859_10000073626 391
28 3300005618 Ga0068864_100029734 Ga0068864_1000297345 391
29 3300006931 Ga0097620_100000736 Ga0097620_10000073626 391
30 3300009177 Ga0105248_10018907 Ga0105248_100189072 391
31 3300014968 Ga0157379_10056220 Ga0157379_100562202 391
32 3300025916 Ga0207663_10002113 Ga0207663_100021138 391
33 3300025941 Ga0207711_10070955 Ga0207711_100709552 391
34 3300026035 Ga0207703_10003719 Ga0207703_100037192 391
35 3300006051 Ga0075364_10110471 Ga0075364_101104711 392
36 3300006844 Ga0075428_100326368 Ga0075428_1003263681 394
37 3300009094 Ga0111539_10015259 Ga0111539_100152597 394
38 3300045051 Ga0451576_0150086 Ga0451576_0150086_1085_2362 394
39 3300050511 nmdc:mga08y16_38509_c1 nmdc:mga08y16_38509_c1_1247_2524 394
40 3300050512 nmdc:mga0n895_11286_c1 nmdc:mga0n895_11286_c1_1045_2358 394
41 3300050515 nmdc:mga0a205_198951_c1 nmdc:mga0a205_198951_c1_522_1835 394
42 3300014326 Ga0157380_10057439 Ga0157380_100574392 395
43 3300046539 Ga0495621_0010327 Ga0495621_0010327_1226_2455 396
44 3300048915 Ga0496112_0000002 Ga0496112_0000002_1478_2701 396
45 3300005440 Ga0070705_100018928 Ga0070705_1000189283 397
46 3300005518 Ga0070699_100001136 Ga0070699_1000011369 397
47 3300005546 Ga0070696_100000409 Ga0070696_10000040926 397
48 3300031903 Ga0307407_10121628 Ga0307407_101216282 397
49 3300046523 Ga0495644_0001063 Ga0495644_0001063_1704_2939 397
50 3300005338 Ga0068868_100000104 Ga0068868_10000010442 398
51 3300005457 Ga0070662_100000001 Ga0070662_100000001194 398
52 3300014326 Ga0157380_10035572 Ga0157380_100355722 398
53 3300025933 Ga0207706_10000003 Ga0207706_10000003137 398
54 3300026023 Ga0207677_10000479 Ga0207677_1000047912 398
55 3300049578 Ga0501042_0011248 Ga0501042_0011248_1044_2279 398
56 iso_pu_bacteria 2523533628 2524001072 398
57 3300049591 Ga0501075_0008072 Ga0501075_0008072_1078_2313 399
58 3300005366 Ga0070659_100147258 Ga0070659_1001472581 400
59 3300005546 Ga0070696_100059549 Ga0070696_1000595492 400
60 3300006852 Ga0075433_10000021 Ga0075433_1000002136 400
61 3300006852 Ga0075433_10007683 Ga0075433_100076836 400
62 3300006871 Ga0075434_100001171 Ga0075434_10000117110 400
63 3300006871 Ga0075434_100028328 Ga0075434_1000283284 400
64 3300006914 Ga0075436_100000826 Ga0075436_10000082619 400
65 3300006914 Ga0075436_100019828 Ga0075436_1000198282 400
66 3300007076 Ga0075435_100000298 Ga0075435_1000002981 400
67 3300009147 Ga0114129_10084255 Ga0114129_100842552 400
68 3300025916 Ga0207663_10207164 Ga0207663_102071641 400
69 3300025939 Ga0207665_10065366 Ga0207665_100653662 400
70 3300046535 Ga0495586_0063940 Ga0495586_0063940_224_1513 400
71 3300050510 nmdc:mga06r32_99254_c1 nmdc:mga06r32_99254_c1_257_1582 400
72 3300050512 nmdc:mga0n895_1035_c1 nmdc:mga0n895_1035_c1_14689_16005 400
73 3300050513 nmdc:mga0rr50_623_c1 nmdc:mga0rr50_623_c1_13125_14441 400
74 3300050514 nmdc:mga08x19_5922_c1 nmdc:mga08x19_5922_c1_84_1400 400
75 3300050515 nmdc:mga0a205_31719_c1 nmdc:mga0a205_31719_c1_778_2067 400
76 3300050515 nmdc:mga0a205_83_c1 nmdc:mga0a205_83_c1_46498_47814 400
77 3300005545 Ga0070695_100029348 Ga0070695_1000293482 401
78 3300005336 Ga0070680_100140297 Ga0070680_1001402971 402
79 3300005406 Ga0070703_10026410 Ga0070703_100264102 402
80 3300005467 Ga0070706_100005988 Ga0070706_1000059888 402
81 3300005518 Ga0070699_100116214 Ga0070699_1001162142 402
82 3300005546 Ga0070696_100017612 Ga0070696_1000176123 402
83 3300005549 Ga0070704_100230777 Ga0070704_1002307771 402
84 3300007076 Ga0075435_100112925 Ga0075435_1001129252 402
85 3300013306 Ga0163162_10065874 Ga0163162_100658742 402
86 3300025910 Ga0207684_10081050 Ga0207684_100810502 402
87 3300025923 Ga0207681_10083782 Ga0207681_100837822 402
88 3300026075 Ga0207708_10200298 Ga0207708_102002982 402
89 3300046475 Ga0495639_0008837 Ga0495639_0008837_2526_3833 402
90 3300005406 Ga0070703_10008962 Ga0070703_100089622 403
91 3300005545 Ga0070695_100102943 Ga0070695_1001029431 403
92 3300006852 Ga0075433_10201414 Ga0075433_102014142 403
93 3300006871 Ga0075434_100008408 Ga0075434_1000084085 403
94 3300025885 Ga0207653_10012313 Ga0207653_100123132 403
95 3300042876 Ga0451577_0057678 Ga0451577_0057678_1092_2429 403
96 3300044712 Ga0453684_0320916 Ga0453684_0320916_213_1550 403
97 3300045051 Ga0451576_0004460 Ga0451576_0004460_5726_7063 403
98 3300046664 Ga0495659_0000982 Ga0495659_0000982_5408_6775 403
99 3300046683 Ga0495658_0000378 Ga0495658_0000378_14907_16211 404
100 3300050509 nmdc:mga0qj67_372_c1 nmdc:mga0qj67_372_c1_13096_14337 404
101 3300005441 Ga0070700_100087183 Ga0070700_1000871832 405
102 3300025940 Ga0207691_10138833 Ga0207691_101388332 405
103 3300026023 Ga0207677_10103681 Ga0207677_101036812 405
104 3300026118 Ga0207675_100015600 Ga0207675_1000156005 405
105 3300032126 Ga0307415_100008232 Ga0307415_1000082326 405
106 3300046511 Ga0495608_0108909 Ga0495608_0108909_147_1385 405
107 3300047322 Ga0495680_0115715 Ga0495680_0115715_77_1315 405
108 3300048924 Ga0496121_0002858 Ga0496121_0002858_2978_4207 405
109 3300049583 Ga0501067_0046474 Ga0501067_0046474_739_1962 405
110 3300005338 Ga0068868_100224945 Ga0068868_1002249452 406
111 3300006844 Ga0075428_100017404 Ga0075428_1000174046 406
112 3300006846 Ga0075430_100026848 Ga0075430_1000268482 406
113 3300006847 Ga0075431_100023665 Ga0075431_1000236656 406
114 3300006880 Ga0075429_100012152 Ga0075429_1000121526 406
115 3300009147 Ga0114129_10036729 Ga0114129_100367294 406
116 3300013306 Ga0163162_10145397 Ga0163162_101453972 406
117 3300026142 Ga0207698_10199122 Ga0207698_101991222 406
118 3300045976 Ga0466967_0053962 Ga0466967_0053962_41_1273 406
119 3300045976 Ga0466967_0181732 Ga0466967_0181732_545_1771 406
120 3300048927 Ga0496124_0135170 Ga0496124_0135170_528_1763 406
121 3300049743 Ga0501081_0047606 Ga0501081_0047606_531_1766 406
122 3300050507 nmdc:mga05p37_94246_c1 nmdc:mga05p37_94246_c1_2185_3420 406
123 3300050508 nmdc:mga09592_9222_c1 nmdc:mga09592_9222_c1_4019_5254 406
124 3300050510 nmdc:mga06r32_24591_c1 nmdc:mga06r32_24591_c1_399_1634 406
125 3300005334 Ga0068869_100200307 Ga0068869_1002003072 407
126 3300005338 Ga0068868_100112244 Ga0068868_1001122442 407
127 3300005341 Ga0070691_10000275 Ga0070691_100002759 407
128 3300005356 Ga0070674_100000030 Ga0070674_10000003046 407
129 3300005365 Ga0070688_100000316 Ga0070688_10000031617 407
130 3300005436 Ga0070713_100000023 Ga0070713_10000002365 407
131 3300005466 Ga0070685_10000032 Ga0070685_1000003239 407
132 3300005535 Ga0070684_100108041 Ga0070684_1001080412 407
133 3300005614 Ga0068856_100035528 Ga0068856_1000355282 407
134 3300005616 Ga0068852_100000037 Ga0068852_10000003798 407
135 3300005718 Ga0068866_10000382 Ga0068866_1000038215 407
136 3300005718 Ga0068866_10093612 Ga0068866_100936122 407
137 3300005841 Ga0068863_100002888 Ga0068863_1000028888 407
138 3300005841 Ga0068863_100105341 Ga0068863_1001053412 407
139 3300005842 Ga0068858_100000017 Ga0068858_100000017124 407
140 3300005937 Ga0081455_10025005 Ga0081455_100250053 407
141 3300006038 Ga0075365_10001163 Ga0075365_100011637 407
142 3300006038 Ga0075365_10007643 Ga0075365_100076435 407
143 3300006038 Ga0075365_10036562 Ga0075365_100365622 407
144 3300006038 Ga0075365_10091521 Ga0075365_100915212 407
145 3300006038 Ga0075365_10141439 Ga0075365_101414392 407
146 3300006051 Ga0075364_10036609 Ga0075364_100366092 407
147 3300006051 Ga0075364_10088154 Ga0075364_100881542 407
148 3300006847 Ga0075431_100000747 Ga0075431_10000074720 407
149 3300006852 Ga0075433_10000553 Ga0075433_1000055324 407
150 3300006852 Ga0075433_10007173 Ga0075433_100071734 407
151 3300006852 Ga0075433_10192941 Ga0075433_101929412 407
152 3300006881 Ga0068865_100000081 Ga0068865_10000008116 407
153 3300009098 Ga0105245_10000249 Ga0105245_100002497 407
154 3300009098 Ga0105245_10000330 Ga0105245_100003306 407
155 3300009177 Ga0105248_10000017 Ga0105248_10000017212 407
156 3300009553 Ga0105249_10000054 Ga0105249_100000546 407
157 3300010375 Ga0105239_10024700 Ga0105239_100247006 407
158 3300013102 Ga0157371_10007427 Ga0157371_100074272 407
159 3300013104 Ga0157370_10056159 Ga0157370_100561592 407
160 3300013105 Ga0157369_10000105 Ga0157369_1000010595 407
161 3300020070 Ga0206356_11454333 Ga0206356_114543332 407
162 3300025899 Ga0207642_10000500 Ga0207642_100005007 407
163 3300025899 Ga0207642_10044533 Ga0207642_100445332 407
164 3300025927 Ga0207687_10000106 Ga0207687_100001067 407
165 3300025928 Ga0207700_10000003 Ga0207700_1000000365 407
166 3300025934 Ga0207686_10000035 Ga0207686_10000035117 407
167 3300025937 Ga0207669_10000029 Ga0207669_100000292 407
168 3300025938 Ga0207704_10000018 Ga0207704_1000001860 407
169 3300025941 Ga0207711_10000011 Ga0207711_10000011259 407
170 3300025942 Ga0207689_10212290 Ga0207689_102122902 407
171 3300025961 Ga0207712_10000032 Ga0207712_10000032158 407
172 3300026035 Ga0207703_10000030 Ga0207703_10000030122 407
173 3300026075 Ga0207708_10167455 Ga0207708_101674552 407
174 3300026078 Ga0207702_10003965 Ga0207702_100039656 407
175 3300026142 Ga0207698_10000015 Ga0207698_10000015220 407
176 3300038443 Ga0395901_0186233 Ga0395901_0186233_936_2159 407
177 3300044694 Ga0466963_0000012 Ga0466963_0000012_4456_5679 407
178 3300044842 Ga0466957_0004548 Ga0466957_0004548_5362_6594 407
179 3300046459 Ga0495629_0012421 Ga0495629_0012421_4374_5606 407
180 3300046459 Ga0495629_0014825 Ga0495629_0014825_539_1768 407
181 3300046511 Ga0495608_0000013 Ga0495608_0000013_218130_219362 407
182 3300046533 Ga0495640_0020061 Ga0495640_0020061_457_1692 407
183 3300046675 Ga0495657_0000003 Ga0495657_0000003_269329_270561 407
184 3300046683 Ga0495658_0002902 Ga0495658_0002902_2741_3973 407
185 3300046809 Ga0495600_0046515 Ga0495600_0046515_1182_2405 407
186 3300047317 Ga0495604_0000104 Ga0495604_0000104_34356_35579 407
187 3300047319 Ga0495674_0000024 Ga0495674_0000024_26540_27775 407
188 3300047321 Ga0495676_0037445 Ga0495676_0037445_2560_3783 407
189 3300047444 Ga0495675_0000094 Ga0495675_0000094_9120_10352 407
190 3300047444 Ga0495675_0022797 Ga0495675_0022797_418_1647 407
191 3300048905 Ga0496102_0000438 Ga0496102_0000438_37110_38339 407
192 3300048906 Ga0496103_0000001 Ga0496103_0000001_633027_634256 407
193 3300048907 Ga0496104_0000008 Ga0496104_0000008_263825_265048 407
194 3300048907 Ga0496104_0000034 Ga0496104_0000034_64588_65880 407
195 3300048908 Ga0496105_0000003 Ga0496105_0000003_263825_265048 407
196 3300048908 Ga0496105_0000386 Ga0496105_0000386_26452_27675 407
197 3300048911 Ga0496108_0000349 Ga0496108_0000349_15086_16318 407
198 3300048911 Ga0496108_0007713 Ga0496108_0007713_3990_5219 407
199 3300048911 Ga0496108_0024518 Ga0496108_0024518_213_1436 407
200 3300048912 Ga0496109_0000307 Ga0496109_0000307_15077_16309 407
201 3300048912 Ga0496109_0000333 Ga0496109_0000333_31600_32823 407
202 3300048913 Ga0496110_0004422 Ga0496110_0004422_6499_7791 407
203 3300048913 Ga0496110_0042435 Ga0496110_0042435_386_1609 407
204 3300048914 Ga0496111_0000130 Ga0496111_0000130_17991_19283 407
205 3300048916 Ga0496113_0000017 Ga0496113_0000017_3440_4672 407
206 3300048916 Ga0496113_0000787 Ga0496113_0000787_12374_13597 407
207 3300048918 Ga0496115_0000022 Ga0496115_0000022_78378_79610 407
208 3300049571 Ga0501034_0006344 Ga0501034_0006344_6263_7489 407
209 3300049571 Ga0501034_0261189 Ga0501034_0261189_176_1402 407
210 3300049572 Ga0501036_0153837 Ga0501036_0153837_671_1894 407
211 3300049578 Ga0501042_0023256 Ga0501042_0023256_2398_3630 407
212 3300049581 Ga0501047_0030508 Ga0501047_0030508_1363_2589 407
213 3300049590 Ga0501074_0112834 Ga0501074_0112834_137_1360 407
214 3300049743 Ga0501081_0149073 Ga0501081_0149073_258_1481 407
215 3300049824 Ga0501045_0100158 Ga0501045_0100158_697_1920 407
216 3300050491 nmdc:mga00v17_36153_c1 nmdc:mga00v17_36153_c1_683_1906 407
217 3300050491 nmdc:mga00v17_63205_c1 nmdc:mga00v17_63205_c1_288_1511 407
218 3300050492 nmdc:mga0yw44_10795_c1 nmdc:mga0yw44_10795_c1_462_1685 407
219 3300050492 nmdc:mga0yw44_17975_c1 nmdc:mga0yw44_17975_c1_1228_2451 407
220 3300050492 nmdc:mga0yw44_77202_c1 nmdc:mga0yw44_77202_c1_723_1946 407
221 3300050515 nmdc:mga0a205_1461_c1 nmdc:mga0a205_1461_c1_7790_9013 407
222 3300050515 nmdc:mga0a205_4_c1 nmdc:mga0a205_4_c1_35638_36861 407
223 3300053077 Ga0495601_0003822 Ga0495601_0003822_6122_7345 407
224 3300053077 Ga0495601_0017400 Ga0495601_0017400_864_2087 407
225 3300053084 Ga0495595_0000007 Ga0495595_0000007_218153_219385 407
226 3300053085 Ga0495619_0000001 Ga0495619_0000001_297428_298651 407
227 3300053085 Ga0495619_0000747 Ga0495619_0000747_14841_16073 407
228 3300053085 Ga0495619_0001241 Ga0495619_0001241_6355_7587 407
229 3300053094 Ga0500566_0052922 Ga0500566_0052922_283_1515 407
230 3300001977 JGI24746J21847_1000086 JGI24746J21847_10000866 408
231 3300005356 Ga0070674_100000019 Ga0070674_10000001985 408
232 3300005435 Ga0070714_100165140 Ga0070714_1001651401 408
233 3300005618 Ga0068864_100000043 Ga0068864_10000004362 408
234 3300006847 Ga0075431_100232936 Ga0075431_1002329362 408
235 3300009098 Ga0105245_10087597 Ga0105245_100875973 408
236 3300017792 Ga0163161_10000240 Ga0163161_1000024046 408
237 3300025929 Ga0207664_10143283 Ga0207664_101432832 408
238 3300025936 Ga0207670_10067247 Ga0207670_100672472 408
239 3300026095 Ga0207676_10000042 Ga0207676_10000042105 408
240 3300028556 Ga0265337_1000101 Ga0265337_10001019 408
241 3300028558 Ga0265326_10000033 Ga0265326_1000003382 408
242 3300028654 Ga0265322_10000005 Ga0265322_1000000536 408
243 3300028666 Ga0265336_10025123 Ga0265336_100251232 408
244 3300029957 Ga0265324_10000207 Ga0265324_1000020720 408
245 3300031239 Ga0265328_10001194 Ga0265328_100011944 408
246 3300031240 Ga0265320_10000010 Ga0265320_1000001082 408
247 3300031249 Ga0265339_10026670 Ga0265339_100266702 408
248 3300031250 Ga0265331_10000869 Ga0265331_1000086915 408
249 3300031251 Ga0265327_10000040 Ga0265327_10000040225 408
250 3300031711 Ga0265314_10000208 Ga0265314_1000020816 408
251 3300031712 Ga0265342_10112281 Ga0265342_101122812 408
252 3300031727 Ga0316576_10003053 Ga0316576_100030538 408
253 3300036401 Ga0373937_0225605 Ga0373937_0225605_70_1299 408
254 3300037418 Ga0395900_0007489 Ga0395900_0007489_6042_7340 408
255 3300037466 Ga0395898_0017304 Ga0395898_0017304_446_1744 408
256 3300037471 Ga0395905_0006892 Ga0395905_0006892_1033_2331 408
257 3300038443 Ga0395901_0004047 Ga0395901_0004047_13032_14330 408
258 3300044694 Ga0466963_0032248 Ga0466963_0032248_358_1593 408
259 3300045976 Ga0466967_0069342 Ga0466967_0069342_1295_2533 408
260 3300046463 Ga0495653_0013362 Ga0495653_0013362_1985_3211 408
261 3300046473 Ga0495582_0000002 Ga0495582_0000002_135430_136665 408
262 3300046476 Ga0495662_0000130 Ga0495662_0000130_12878_14113 408
263 3300046511 Ga0495608_0000346 Ga0495608_0000346_10055_11290 408
264 3300046514 Ga0495618_0000218 Ga0495618_0000218_18484_19719 408
265 3300046516 Ga0495628_0036439 Ga0495628_0036439_275_1510 408
266 3300046517 Ga0495630_0001724 Ga0495630_0001724_3784_5019 408
267 3300046517 Ga0495630_0003792 Ga0495630_0003792_5728_6954 408
268 3300046536 Ga0495587_0001663 Ga0495587_0001663_91_1326 408
269 3300046543 Ga0495645_0021391 Ga0495645_0021391_327_1565 408
270 3300046559 Ga0495667_0000019 Ga0495667_0000019_142929_144167 408
271 3300046642 Ga0495634_0001012 Ga0495634_0001012_17787_19013 408
272 3300046642 Ga0495634_0073903 Ga0495634_0073903_963_2189 408
273 3300046663 Ga0495635_0008494 Ga0495635_0008494_2638_3867 408
274 3300046675 Ga0495657_0007033 Ga0495657_0007033_2609_3844 408
275 3300046675 Ga0495657_0058393 Ga0495657_0058393_621_1847 408
276 3300046683 Ga0495658_0000001 Ga0495658_0000001_255603_256838 408
277 3300046691 Ga0495670_0017390 Ga0495670_0017390_2191_3426 408
278 3300046809 Ga0495600_0000652 Ga0495600_0000652_9387_10622 408
279 3300047322 Ga0495680_0007564 Ga0495680_0007564_1267_2505 408
280 3300048918 Ga0496115_0019181 Ga0496115_0019181_1831_3069 408
281 3300049575 Ga0501039_0027933 Ga0501039_0027933_1444_2670 408
282 3300049576 Ga0501040_0076271 Ga0501040_0076271_509_1735 408
283 3300049577 Ga0501041_0087404 Ga0501041_0087404_648_1874 408
284 3300049578 Ga0501042_0103639 Ga0501042_0103639_23_1249 408
285 3300053077 Ga0495601_0006771 Ga0495601_0006771_528_1754 408
286 3300053078 Ga0495612_0002233 Ga0495612_0002233_5307_6533 408
287 3300053084 Ga0495595_0000148 Ga0495595_0000148_26958_28193 408
288 3300053085 Ga0495619_0000413 Ga0495619_0000413_20793_22022 408
289 3300053085 Ga0495619_0003870 Ga0495619_0003870_1333_2559 408
290 3300054114 Ga0501084_0162875 Ga0501084_0162875_431_1657 408

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00742

Homoserine_dh

Homoserine dehydrogenase

138

316

0.99

PF01842

ACT

ACT domain

376

442

0.97

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

11

130

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dzs-assembly1.cif.gz_A mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9508 4 403
6dzs-assembly2.cif.gz_C mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9498 4 403
6dzs-assembly2.cif.gz_D mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9485 4 403
3mtj-assembly1.cif.gz_A the crystal structure of a homoserine dehydrogenase from thiobacillus denitrificans to 2.15a 0.944 4 404
6dzs-assembly1.cif.gz_B mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9363 4 403
ID Description Score Start End Superfamily
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9752 138 282 3.30.360.10
af_P27249_815_877_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9628 328 372 3.30.70.260
3mtjA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9585 123 282 3.30.360.10
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9558 138 282 3.30.360.10
af_P9WPX1_139_304_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9529 123 282 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A7K0S100-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.975 1 292 GO:0004412
GO:0009086
GO:0009088
GO:0050661
AF-A0A435XNI5-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9703 149 288 GO:0004412
GO:0009088
AF-A0A7K0S100-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9685 1 292 GO:0004412
GO:0009086
GO:0009088
GO:0050661
AF-A0A1L5KU37-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9684 134 403 GO:0004412
GO:0009086
GO:0009088
AF-A0A7Y5XUF6-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9668 2 249 GO:0004412
GO:0009086
GO:0009088
GO:0050661

Feature Viewer

pLDDT pTM Quality
90.77 0.87 High
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Predicted Structure (AlphaFold2)

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