F389963

General Info

Members Datasets Scaffolds Average Seq Length
290 185 580 587

Family's Representative Sequence

Representative Sequence 3300046533|Ga0495640_0028762|Ga0495640_0028762_1435_3456
Length 673
Sequence MICDTGAFGDGGCGQRRRAVGSSADMTGEPSSLGDTERNSVNSGTPSSKEGNAIALSMFLRTGGIAMSATPTLKKALSQRQLTMIAIGGVIGAGLFVGSGVVIKDTGPGSFITYALAGVLIIMVMRMLAEMAVANPSTGSFADYARNAMGNWAGFSVGWLYWYFWVIVVGFEAIAGAKIIQYWVDIPLWLSALVLLVLMTATNLFSVSSFGEFEFWFAGIKVAAIIVFLALGALFVVGLWPHKSMDFSNLWSHGGFFPLGVMAVTVGVVTVIFSMVGAEIATIAAAESSDPERAVAKAANSVILRIAIFFVGSAFLLVTILPWNGEKLAASPFVSAFTEMGIPYADHIMNAVVLTAVLSCLNSGMYTASRMLFVLAARREAPPQLVAVTRRGVPATAILASSVIGFLCVIAAAVSPKTIFQFLLNSSGAVILFVYLLICISQIVLRRRTPDSELRVKMWLFPWLSGATAIGIVAILVQMFVQGGDNRSALLLSLLSWAVVLALFFANKWFIARRPHVEGAAPTAKPLRVLVLANETANSGELLDELRRIGADNAAKYFVVVPASPIETGVAATHGPLDLAEATRQAAEQRLDYTLTTLRSDHLDADGTLGDYRPLQALANGVDTFHPDQIVIATLPPEYSVWQRFDVVDRARAAYDVPVTHVVATPAALFTTP

Samples

Sample ID Description Type Environment
1 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
4 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
5 3300002073 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 Metagenome Rhizosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
118 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
119 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
120 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
125 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
175 2643221711 Terrabacter sp. Root85 Isolate Unclassified
176 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
177 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
178 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
179 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
180 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
181 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
182 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
183 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
184 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
185 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.52
Metatranscriptomes 0.34
Isolates 4.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 0.34
Rhizoplane 20.34
Rhizosphere 70.69
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495640_0028762 3300046533 Bacteria 3998
2 LJQas_1001495 3300000549 Bacteria 3480
3 JGI24746J21847_1000940 3300001977 Bacteria 4566
4 JGI24746J21847_1004948 3300001977 Bacteria 2088
5 JGI24743J22301_10001346 3300001991 Bacteria 3372
6 JGI24745J21846_1001102 3300002073 Bacteria 2556
7 Ga0055540_1002527 3300003792 Bacteria 9554
8 Ga0070683_100013772 3300005329 Bacteria 7060
9 Ga0070683_100020798 3300005329 Bacteria 5846
10 Ga0070666_10024355 3300005335 Bacteria 3942
11 Ga0070682_100065295 3300005337 Bacteria 2312
12 Ga0068868_100000692 3300005338 Bacteria 22636
13 Ga0070691_10022794 3300005341 Bacteria 2906
14 Ga0070668_100042368 3300005347 Bacteria 3489
15 Ga0070675_100101616 3300005354 Bacteria 2422
16 Ga0070674_100007867 3300005356 Bacteria 6307
17 Ga0070673_100099013 3300005364 Bacteria 2397
18 Ga0070688_100057039 3300005365 Bacteria 2453
19 Ga0070667_100001391 3300005367 Bacteria 21661
20 Ga0070711_100006843 3300005439 Bacteria 6901
21 Ga0070700_100001058 3300005441 Bacteria 13635
22 Ga0070694_100036871 3300005444 Bacteria 3241
23 Ga0070678_100064185 3300005456 Bacteria 2720
24 Ga0068867_100033285 3300005459 Bacteria 3731
25 Ga0068867_100107207 3300005459 Bacteria 2141
26 Ga0070685_10040478 3300005466 Bacteria 2652
27 Ga0070693_100044777 3300005547 Bacteria 2504
28 Ga0070665_100119269 3300005548 Bacteria 2640
29 Ga0070704_100029810 3300005549 Bacteria 3648
30 Ga0068855_100099167 3300005563 Bacteria 3356
31 Ga0068854_100021580 3300005578 Bacteria 4371
32 Ga0070702_100002820 3300005615 Bacteria 7620
33 Ga0070702_100013745 3300005615 Bacteria 4094
34 Ga0068852_100031243 3300005616 Bacteria 4392
35 Ga0068852_100039726 3300005616 Bacteria 3963
36 Ga0068861_100058389 3300005719 Bacteria 2950
37 Ga0068863_100077114 3300005841 Bacteria 3154
38 Ga0068858_100005965 3300005842 Bacteria 11896
39 Ga0068858_100054867 3300005842 Bacteria 3685
40 Ga0081455_10000221 3300005937 Bacteria 73556
41 Ga0081455_10017892 3300005937 Bacteria 6773
42 Ga0081455_10021003 3300005937 Bacteria 6133
43 Ga0081455_10099988 3300005937 Bacteria 2331
44 Ga0075365_10055852 3300006038 Bacteria 2623
45 Ga0075368_10010968 3300006042 Bacteria 3289
46 Ga0075364_10018933 3300006051 Bacteria 4317
47 Ga0075432_10001400 3300006058 Bacteria 7836
48 Ga0075367_10006543 3300006178 Bacteria 5896
49 Ga0075428_100071667 3300006844 Bacteria 3787
50 Ga0075434_100010717 3300006871 Bacteria 8608
51 Ga0068865_100065152 3300006881 Bacteria 2566
52 Ga0111539_10071983 3300009094 Bacteria 4078
53 Ga0111539_10121719 3300009094 Bacteria 3057
54 Ga0105245_10064923 3300009098 Bacteria 3300
55 Ga0105247_10042603 3300009101 Bacteria 2781
56 Ga0105247_10054542 3300009101 Bacteria 2466
57 Ga0105243_10000666 3300009148 Bacteria 33575
58 Ga0105243_10132509 3300009148 Bacteria 2116
59 Ga0105242_10023356 3300009176 Bacteria 4872
60 Ga0105242_10077552 3300009176 Bacteria 2772
61 Ga0105242_10084188 3300009176 Bacteria 2664
62 Ga0105248_10012043 3300009177 Bacteria 9539
63 Ga0105237_10000103 3300009545 Bacteria 118661
64 Ga0105237_10007553 3300009545 Bacteria 11881
65 Ga0105237_10012916 3300009545 Bacteria 8774
66 Ga0105238_10140641 3300009551 Bacteria 2390
67 Ga0105249_10100640 3300009553 Bacteria 2718
68 Ga0105249_10156039 3300009553 Bacteria 2201
69 Ga0105239_10001962 3300010375 Bacteria 26758
70 Ga0105239_10025485 3300010375 Bacteria 6511
71 Ga0105239_10065317 3300010375 Bacteria 3996
72 Ga0105239_10118960 3300010375 Bacteria 2932
73 Ga0105246_10030159 3300011119 Bacteria 3579
74 Ga0157374_10044413 3300013296 Bacteria 4108
75 Ga0157374_10066401 3300013296 Bacteria 3390
76 Ga0163162_10058850 3300013306 Bacteria 3873
77 Ga0163162_10090647 3300013306 Bacteria 3139
78 Ga0163162_10158811 3300013306 Bacteria 2382
79 Ga0157372_10092308 3300013307 Bacteria 3444
80 Ga0157372_10105672 3300013307 Bacteria 3220
81 Ga0157375_10017860 3300013308 Bacteria 6416
82 Ga0157375_10042762 3300013308 Bacteria 4388
83 Ga0157375_10115169 3300013308 Bacteria 2791
84 Ga0157375_10135463 3300013308 Bacteria 2586
85 Ga0157377_10018070 3300014745 Bacteria 3660
86 Ga0163161_10047769 3300017792 Bacteria 3090
87 Ga0206350_10916588 3300020080 Bacteria 2801
88 Ga0213871_10006807 3300021441 Bacteria 2438
89 Ga0209051_1000215 3300025303 Bacteria 97795
90 Ga0207653_10014146 3300025885 Bacteria 2502
91 Ga0207647_10052419 3300025904 Bacteria 2518
92 Ga0207645_10034123 3300025907 Bacteria 3269
93 Ga0207643_10036433 3300025908 Bacteria 2759
94 Ga0207671_10013658 3300025914 Bacteria 6454
95 Ga0207671_10096976 3300025914 Bacteria 2229
96 Ga0207693_10007977 3300025915 Bacteria 8697
97 Ga0207663_10006023 3300025916 Bacteria 6164
98 Ga0207657_10055110 3300025919 Bacteria 3435
99 Ga0207687_10026535 3300025927 Bacteria 3879
100 Ga0207706_10057902 3300025933 Bacteria 3413
101 Ga0207669_10000294 3300025937 Bacteria 22937
102 Ga0207704_10033044 3300025938 Bacteria 2937
103 Ga0207691_10017409 3300025940 Bacteria 6816
104 Ga0207691_10100869 3300025940 Bacteria 2576
105 Ga0207711_10028898 3300025941 Bacteria 4671
106 Ga0207711_10078406 3300025941 Bacteria 2882
107 Ga0207689_10016680 3300025942 Bacteria 6216
108 Ga0207667_10076976 3300025949 Bacteria 3461
109 Ga0207712_10010532 3300025961 Bacteria 5869
110 Ga0207712_10041352 3300025961 Bacteria 3168
111 Ga0207668_10003567 3300025972 Bacteria 9144
112 Ga0207668_10066737 3300025972 Bacteria 2551
113 Ga0207640_10028627 3300025981 Bacteria 3408
114 Ga0207640_10040407 3300025981 Bacteria 2958
115 Ga0207640_10078061 3300025981 Bacteria 2252
116 Ga0207658_10001472 3300025986 Bacteria 18310
117 Ga0207677_10024698 3300026023 Bacteria 3738
118 Ga0207703_10026443 3300026035 Bacteria 4568
119 Ga0207639_10065019 3300026041 Bacteria 2830
120 Ga0207678_10076675 3300026067 Bacteria 2863
121 Ga0207708_10000462 3300026075 Bacteria 31518
122 Ga0207702_10090978 3300026078 Bacteria 2671
123 Ga0207648_10058540 3300026089 Bacteria 3360
124 Ga0207676_10094652 3300026095 Bacteria 2462
125 Ga0207674_10066607 3300026116 Bacteria 3627
126 Ga0207675_100028381 3300026118 Bacteria 5211
127 Ga0207675_100059023 3300026118 Bacteria 3581
128 Ga0207683_10054340 3300026121 Bacteria 3512
129 Ga0207683_10107657 3300026121 Bacteria 2494
130 Ga0207683_10122141 3300026121 Bacteria 2339
131 Ga0207698_10079941 3300026142 Bacteria 2632
132 Ga0268266_10023755 3300028379 Bacteria 5217
133 Ga0268265_10039896 3300028380 Bacteria 3463
134 Ga0268265_10047157 3300028380 Bacteria 3227
135 Ga0268264_10011778 3300028381 Bacteria 7211
136 Ga0265327_10001079 3300031251 Bacteria 37989
137 Ga0307408_100045886 3300031548 Bacteria 3123
138 Ga0307405_10002224 3300031731 Bacteria 8482
139 Ga0307410_10032099 3300031852 Bacteria 3375
140 Ga0307410_10073031 3300031852 Bacteria 2384
141 Ga0307406_10000477 3300031901 Bacteria 23095
142 Ga0307406_10011644 3300031901 Bacteria 4993
143 Ga0307406_10035292 3300031901 Bacteria 3074
144 Ga0307412_10046835 3300031911 Bacteria 2836
145 Ga0307412_10057409 3300031911 Bacteria 2598
146 Ga0307409_100000009 3300031995 Bacteria 68887
147 Ga0307416_100000281 3300032002 Bacteria 27004
148 Ga0307416_100037523 3300032002 Bacteria 3729
149 Ga0307416_100041406 3300032002 Bacteria 3587
150 Ga0307416_100156730 3300032002 Bacteria 2097
151 Ga0307414_10046697 3300032004 Bacteria 2975
152 Ga0307414_10096257 3300032004 Bacteria 2214
153 Ga0307411_10025234 3300032005 Bacteria 3558
154 Ga0307415_100006514 3300032126 Bacteria 6309
155 Ga0307415_100133247 3300032126 Bacteria 1885
156 Ga0373931_0005857 3300035691 Bacteria 5719
157 Ga0395899_0052343 3300037312 Bacteria 3027
158 Ga0395900_0133114 3300037418 Bacteria 2547
159 Ga0395898_0082475 3300037466 Bacteria 3099
160 Ga0395905_0062776 3300037471 Bacteria 3475
161 Ga0395901_0073225 3300038443 Bacteria 3572
162 Ga0395901_0154247 3300038443 Bacteria 2412
163 Ga0436360_0079020 3300039438 Bacteria 6145
164 Ga0436362_0549655 3300039453 Bacteria 4660
165 Ga0439461_0000516 3300041410 Bacteria 5595
166 Ga0439466_0002325 3300041411 Bacteria 7462
167 Ga0439466_0008124 3300041411 Bacteria 3956
168 Ga0439465_0001912 3300041413 Bacteria 6824
169 Ga0439465_0004673 3300041413 Bacteria 4416
170 Ga0439465_0004698 3300041413 Bacteria 4404
171 Ga0451789_1313611 3300041443 Bacteria 3974
172 Ga0466972_0008917 3300044658 Bacteria 5031
173 Ga0466965_0005127 3300044683 Bacteria 5882
174 Ga0466965_0049665 3300044683 Bacteria 2080
175 Ga0466963_0063110 3300044694 Bacteria 2479
176 Ga0466971_0044498 3300044719 Bacteria 1993
177 Ga0466968_0018295 3300044735 Bacteria 2810
178 Ga0466970_0014848 3300044765 Bacteria 4003
179 Ga0466957_0057840 3300044842 Bacteria 2374
180 Ga0466957_0060094 3300044842 Bacteria 2330
181 Ga0466957_0069897 3300044842 Bacteria 2169
182 Ga0466960_0000265 3300044901 Bacteria 18060
183 Ga0466960_0003325 3300044901 Bacteria 6167
184 Ga0466960_0038800 3300044901 Bacteria 2242
185 Ga0466958_0024758 3300045836 Bacteria 3532
186 Ga0466958_0029214 3300045836 Bacteria 3271
187 Ga0466958_0035135 3300045836 Bacteria 2994
188 Ga0466967_0000815 3300045976 Bacteria 16361
189 Ga0466967_0094984 3300045976 Bacteria 2716
190 Ga0466967_0169872 3300045976 Bacteria 2051
191 Ga0495686_0007059 3300047472 Bacteria 8473
192 Ga0495593_0021511 3300047673 Bacteria 3602
193 Ga0496100_0000045 3300048903 Bacteria 77867
194 Ga0496100_0000393 3300048903 Bacteria 21163
195 Ga0496100_0001863 3300048903 Bacteria 10560
196 Ga0496100_0014054 3300048903 Bacteria 4639
197 Ga0496100_0018212 3300048903 Bacteria 4162
198 Ga0496100_0060479 3300048903 Bacteria 2493
199 Ga0496101_0000142 3300048904 Bacteria 63473
200 Ga0496101_0000252 3300048904 Bacteria 38425
201 Ga0496101_0000407 3300048904 Bacteria 27958
202 Ga0496101_0030289 3300048904 Bacteria 3792
203 Ga0496102_0003529 3300048905 Bacteria 13260
204 Ga0496102_0006356 3300048905 Bacteria 10073
205 Ga0496102_0008170 3300048905 Bacteria 8955
206 Ga0496102_0058732 3300048905 Bacteria 3515
207 Ga0496103_0000574 3300048906 Bacteria 29148
208 Ga0496103_0001137 3300048906 Bacteria 18499
209 Ga0496103_0028771 3300048906 Bacteria 3375
210 Ga0496103_0035897 3300048906 Bacteria 3035
211 Ga0496104_0001573 3300048907 Bacteria 19634
212 Ga0496104_0011901 3300048907 Bacteria 7807
213 Ga0496104_0044752 3300048907 Bacteria 4159
214 Ga0496105_0002991 3300048908 Bacteria 12429
215 Ga0496105_0005177 3300048908 Bacteria 9884
216 Ga0496105_0055111 3300048908 Bacteria 3283
217 Ga0496106_0001186 3300048909 Bacteria 19443
218 Ga0496106_0001380 3300048909 Bacteria 18204
219 Ga0496106_0027330 3300048909 Bacteria 4249
220 Ga0496106_0028236 3300048909 Bacteria 4179
221 Ga0496106_0038243 3300048909 Bacteria 3590
222 Ga0496107_0000641 3300048910 Bacteria 19704
223 Ga0496107_0001934 3300048910 Bacteria 13151
224 Ga0496107_0006095 3300048910 Bacteria 8282
225 Ga0496107_0009266 3300048910 Bacteria 6826
226 Ga0496107_0086798 3300048910 Bacteria 2284
227 Ga0496107_0099427 3300048910 Bacteria 2132
228 Ga0496108_0004122 3300048911 Bacteria 11675
229 Ga0496108_0056866 3300048911 Bacteria 3287
230 Ga0496108_0071205 3300048911 Bacteria 2933
231 Ga0496108_0093300 3300048911 Bacteria 2560
232 Ga0496108_0134281 3300048911 Bacteria 2128
233 Ga0496108_0173864 3300048911 Bacteria 1864
234 Ga0496109_0000048 3300048912 Bacteria 129278
235 Ga0496109_0121786 3300048912 Bacteria 2431
236 Ga0496110_0015542 3300048913 Bacteria 6338
237 Ga0496110_0049321 3300048913 Bacteria 3693
238 Ga0496110_0082253 3300048913 Bacteria 2871
239 Ga0496110_0152911 3300048913 Bacteria 2090
240 Ga0496111_0008839 3300048914 Bacteria 6692
241 Ga0496111_0045790 3300048914 Bacteria 3148
242 Ga0496111_0082322 3300048914 Bacteria 2351
243 Ga0496112_0071971 3300048915 Bacteria 3417
244 Ga0496112_0147489 3300048915 Bacteria 2321
245 Ga0496114_0000514 3300048917 Bacteria 28427
246 Ga0496114_0013893 3300048917 Bacteria 6455
247 Ga0496114_0016269 3300048917 Bacteria 5991
248 Ga0496115_0006332 3300048918 Bacteria 8666
249 Ga0496115_0006729 3300048918 Bacteria 8431
250 Ga0496115_0010824 3300048918 Bacteria 6822
251 Ga0496116_0008057 3300048919 Bacteria 9216
252 Ga0496117_0033184 3300048920 Bacteria 3907
253 Ga0496118_0028027 3300048921 Bacteria 4753
254 Ga0496119_0006209 3300048922 Bacteria 11171
255 Ga0496121_0000016 3300048924 Bacteria 562911
256 Ga0496122_0000490 3300048925 Bacteria 82168
257 Ga0496123_0022730 3300048926 Bacteria 4822
258 Ga0496124_0000095 3300048927 Bacteria 184593
259 Ga0496125_0000151 3300048928 Bacteria 153487
260 Ga0496126_0000015 3300048929 Bacteria 663212
261 Ga0501032_0009835 3300049569 Bacteria 6917
262 Ga0501034_0059179 3300049571 Bacteria 3849
263 Ga0501034_0069705 3300049571 Bacteria 3527
264 Ga0501036_0001863 3300049572 Bacteria 16348
265 Ga0501037_0086002 3300049573 Bacteria 2276
266 Ga0501039_0000771 3300049575 Bacteria 23004
267 Ga0501043_0000790 3300049579 Bacteria 28168
268 Ga0501067_0031897 3300049583 Bacteria 2924
269 Ga0501069_0018846 3300049585 Bacteria 3725
270 Ga0501035_0000602 3300049822 Bacteria 39639
271 Ga0501044_0012463 3300049823 Bacteria 9207
272 Ga0501044_0018624 3300049823 Bacteria 7438
273 nmdc:mga0qj67_54280_c1 3300050509 Bacteria 3173
274 nmdc:mga08y16_19097_c1 3300050511 Bacteria 7222
275 nmdc:mga0a205_14727_c1 3300050515 Bacteria 7296
276 nmdc:mga0sz30_14492_c1 3300050516 Bacteria 3105
277 Ga0500616_0017513 3300053153 Bacteria 4063
278 Ga0530510_0038086 3300061734 Bacteria 3471
279 2523387975 2523231044 Bacteria 6434991
280 2644610015 2643221711 Bacteria 4865335
281 2644636904 2643221715 Bacteria 6671032
282 2738667135 2738541264 Bacteria 5935393
283 2739145979 2738541356 Bacteria 5935017
284 2812373151 2811994882 Bacteria 4688362
285 2819427149 2818991318 Bacteria 5266538
286 2819666639 2818991458 Bacteria 4794049
287 2819727141 2818991469 Bacteria 4644110
288 2842137401 2842134933 Bacteria 5847019
289 2902810538 2902810491 Bacteria 6794147
290 2939584593 2939582691 Bacteria 7088898
291 Ga0495640_0028762
292 LJQas_1001495
293 JGI24746J21847_1000940
294 JGI24746J21847_1004948
295 JGI24743J22301_10001346
296 JGI24745J21846_1001102
297 Ga0055540_1002527
298 Ga0070683_100013772
299 Ga0070683_100020798
300 Ga0070666_10024355
301 Ga0070682_100065295
302 Ga0068868_100000692
303 Ga0070691_10022794
304 Ga0070668_100042368
305 Ga0070675_100101616
306 Ga0070674_100007867
307 Ga0070673_100099013
308 Ga0070688_100057039
309 Ga0070667_100001391
310 Ga0070711_100006843
311 Ga0070700_100001058
312 Ga0070694_100036871
313 Ga0070678_100064185
314 Ga0068867_100033285
315 Ga0068867_100107207
316 Ga0070685_10040478
317 Ga0070693_100044777
318 Ga0070665_100119269
319 Ga0070704_100029810
320 Ga0068855_100099167
321 Ga0068854_100021580
322 Ga0070702_100002820
323 Ga0070702_100013745
324 Ga0068852_100031243
325 Ga0068852_100039726
326 Ga0068861_100058389
327 Ga0068863_100077114
328 Ga0068858_100005965
329 Ga0068858_100054867
330 Ga0081455_10000221
331 Ga0081455_10017892
332 Ga0081455_10021003
333 Ga0081455_10099988
334 Ga0075365_10055852
335 Ga0075368_10010968
336 Ga0075364_10018933
337 Ga0075432_10001400
338 Ga0075367_10006543
339 Ga0075428_100071667
340 Ga0075434_100010717
341 Ga0068865_100065152
342 Ga0111539_10071983
343 Ga0111539_10121719
344 Ga0105245_10064923
345 Ga0105247_10042603
346 Ga0105247_10054542
347 Ga0105243_10000666
348 Ga0105243_10132509
349 Ga0105242_10023356
350 Ga0105242_10077552
351 Ga0105242_10084188
352 Ga0105248_10012043
353 Ga0105237_10000103
354 Ga0105237_10007553
355 Ga0105237_10012916
356 Ga0105238_10140641
357 Ga0105249_10100640
358 Ga0105249_10156039
359 Ga0105239_10001962
360 Ga0105239_10025485
361 Ga0105239_10065317
362 Ga0105239_10118960
363 Ga0105246_10030159
364 Ga0157374_10044413
365 Ga0157374_10066401
366 Ga0163162_10058850
367 Ga0163162_10090647
368 Ga0163162_10158811
369 Ga0157372_10092308
370 Ga0157372_10105672
371 Ga0157375_10017860
372 Ga0157375_10042762
373 Ga0157375_10115169
374 Ga0157375_10135463
375 Ga0157377_10018070
376 Ga0163161_10047769
377 Ga0206350_10916588
378 Ga0213871_10006807
379 Ga0209051_1000215
380 Ga0207653_10014146
381 Ga0207647_10052419
382 Ga0207645_10034123
383 Ga0207643_10036433
384 Ga0207671_10013658
385 Ga0207671_10096976
386 Ga0207693_10007977
387 Ga0207663_10006023
388 Ga0207657_10055110
389 Ga0207687_10026535
390 Ga0207706_10057902
391 Ga0207669_10000294
392 Ga0207704_10033044
393 Ga0207691_10017409
394 Ga0207691_10100869
395 Ga0207711_10028898
396 Ga0207711_10078406
397 Ga0207689_10016680
398 Ga0207667_10076976
399 Ga0207712_10010532
400 Ga0207712_10041352
401 Ga0207668_10003567
402 Ga0207668_10066737
403 Ga0207640_10028627
404 Ga0207640_10040407
405 Ga0207640_10078061
406 Ga0207658_10001472
407 Ga0207677_10024698
408 Ga0207703_10026443
409 Ga0207639_10065019
410 Ga0207678_10076675
411 Ga0207708_10000462
412 Ga0207702_10090978
413 Ga0207648_10058540
414 Ga0207676_10094652
415 Ga0207674_10066607
416 Ga0207675_100028381
417 Ga0207675_100059023
418 Ga0207683_10054340
419 Ga0207683_10107657
420 Ga0207683_10122141
421 Ga0207698_10079941
422 Ga0268266_10023755
423 Ga0268265_10039896
424 Ga0268265_10047157
425 Ga0268264_10011778
426 Ga0265327_10001079
427 Ga0307408_100045886
428 Ga0307405_10002224
429 Ga0307410_10032099
430 Ga0307410_10073031
431 Ga0307406_10000477
432 Ga0307406_10011644
433 Ga0307406_10035292
434 Ga0307412_10046835
435 Ga0307412_10057409
436 Ga0307409_100000009
437 Ga0307416_100000281
438 Ga0307416_100037523
439 Ga0307416_100041406
440 Ga0307416_100156730
441 Ga0307414_10046697
442 Ga0307414_10096257
443 Ga0307411_10025234
444 Ga0307415_100006514
445 Ga0307415_100133247
446 Ga0373931_0005857
447 Ga0395899_0052343
448 Ga0395900_0133114
449 Ga0395898_0082475
450 Ga0395905_0062776
451 Ga0395901_0073225
452 Ga0395901_0154247
453 Ga0436360_0079020
454 Ga0436362_0549655
455 Ga0439461_0000516
456 Ga0439466_0002325
457 Ga0439466_0008124
458 Ga0439465_0001912
459 Ga0439465_0004673
460 Ga0439465_0004698
461 Ga0451789_1313611
462 Ga0466972_0008917
463 Ga0466965_0005127
464 Ga0466965_0049665
465 Ga0466963_0063110
466 Ga0466971_0044498
467 Ga0466968_0018295
468 Ga0466970_0014848
469 Ga0466957_0057840
470 Ga0466957_0060094
471 Ga0466957_0069897
472 Ga0466960_0000265
473 Ga0466960_0003325
474 Ga0466960_0038800
475 Ga0466958_0024758
476 Ga0466958_0029214
477 Ga0466958_0035135
478 Ga0466967_0000815
479 Ga0466967_0094984
480 Ga0466967_0169872
481 Ga0495686_0007059
482 Ga0495593_0021511
483 Ga0496100_0000045
484 Ga0496100_0000393
485 Ga0496100_0001863
486 Ga0496100_0014054
487 Ga0496100_0018212
488 Ga0496100_0060479
489 Ga0496101_0000142
490 Ga0496101_0000252
491 Ga0496101_0000407
492 Ga0496101_0030289
493 Ga0496102_0003529
494 Ga0496102_0006356
495 Ga0496102_0008170
496 Ga0496102_0058732
497 Ga0496103_0000574
498 Ga0496103_0001137
499 Ga0496103_0028771
500 Ga0496103_0035897
501 Ga0496104_0001573
502 Ga0496104_0011901
503 Ga0496104_0044752
504 Ga0496105_0002991
505 Ga0496105_0005177
506 Ga0496105_0055111
507 Ga0496106_0001186
508 Ga0496106_0001380
509 Ga0496106_0027330
510 Ga0496106_0028236
511 Ga0496106_0038243
512 Ga0496107_0000641
513 Ga0496107_0001934
514 Ga0496107_0006095
515 Ga0496107_0009266
516 Ga0496107_0086798
517 Ga0496107_0099427
518 Ga0496108_0004122
519 Ga0496108_0056866
520 Ga0496108_0071205
521 Ga0496108_0093300
522 Ga0496108_0134281
523 Ga0496108_0173864
524 Ga0496109_0000048
525 Ga0496109_0121786
526 Ga0496110_0015542
527 Ga0496110_0049321
528 Ga0496110_0082253
529 Ga0496110_0152911
530 Ga0496111_0008839
531 Ga0496111_0045790
532 Ga0496111_0082322
533 Ga0496112_0071971
534 Ga0496112_0147489
535 Ga0496114_0000514
536 Ga0496114_0013893
537 Ga0496114_0016269
538 Ga0496115_0006332
539 Ga0496115_0006729
540 Ga0496115_0010824
541 Ga0496116_0008057
542 Ga0496117_0033184
543 Ga0496118_0028027
544 Ga0496119_0006209
545 Ga0496121_0000016
546 Ga0496122_0000490
547 Ga0496123_0022730
548 Ga0496124_0000095
549 Ga0496125_0000151
550 Ga0496126_0000015
551 Ga0501032_0009835
552 Ga0501034_0059179
553 Ga0501034_0069705
554 Ga0501036_0001863
555 Ga0501037_0086002
556 Ga0501039_0000771
557 Ga0501043_0000790
558 Ga0501067_0031897
559 Ga0501069_0018846
560 Ga0501035_0000602
561 Ga0501044_0012463
562 Ga0501044_0018624
563 nmdc:mga0qj67_54280_c1
564 nmdc:mga08y16_19097_c1
565 nmdc:mga0a205_14727_c1
566 nmdc:mga0sz30_14492_c1
567 Ga0500616_0017513
568 Ga0530510_0038086
569 2523387975
570 2644610015
571 2644636904
572 2738667135
573 2739145979
574 2812373151
575 2819427149
576 2819666639
577 2819727141
578 2842137401
579 2902810538
580 2939584593

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00324

AA_permease

Amino acid permease

81

518

0.92

PF13520

AA_permease_2

Amino acid permease

77

505

0.87

PF03845

Spore_permease

Spore germination protein

76

375

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8535 3 382
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.8201 2 376
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.8141 2 376
3ob6-assembly1.cif.gz_A structure of adic(n101a) in the open-to-out arg+ bound conformation 0.8138 1 399
7p9v-assembly1.cif.gz_B cryo em structure of system xc- 0.8097 2 376
ID Description Score Start End Superfamily
af_L7N6B9_1_429_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9561 1 379 1.20.1740.10
af_P25527_13_458_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9091 1 381 1.20.1740.10
af_P24207_19_458_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9088 1 378 1.20.1740.10
af_P27837_7_458_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8943 1 386 1.20.1740.10
af_P25737_13_472_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8913 2 367 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A372JQ63-F1-model_v4 Amino acid permease 0.9321 2 380 GO:0006865
GO:0016020
GO:0055085
AF-A0A7Z6XEM7-F1-model_v4 Amino acid permease-associated region 0.9307 1 381 GO:0006865
GO:0016020
GO:0055085
AF-A0A6G4TTH4-F1-model_v4 Amino acid permease 0.9301 2 380 GO:0006865
GO:0016020
GO:0055085
AF-A0A1Q8LB54-F1-model_v4 Aromatic amino acid transport protein AroP 0.9294 1 381 GO:0015185
GO:0016020
AF-A0A117UXF9-F1-model_v4 GABA permease 0.9289 2 381 GO:0016020
GO:0055085

Map