F389576

General Info

Members Datasets Scaffolds Average Seq Length
290 193 580 141

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100351707|Ga0070683_1003517073
Length 146
Sequence VIILDTNVLSALMRKAPDAVVVAWLDRQPAESIWITSITLFEIRLGLALLPDGKRQAALVSAFARLLEEDLENRILDFDSGAAIEAAELAAKRQVGGRPVDIRDTQIAGIALARHATLATRNTRHFEDLTVNVVDPWQPSERLGTS

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
101 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
107 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
108 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
109 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
133 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
134 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
137 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
141 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
144 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
145 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
146 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
147 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
152 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
153 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
154 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
155 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
158 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
161 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
162 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
163 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
164 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
165 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
169 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
172 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
173 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
177 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
178 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
179 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
190 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
191 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
192 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
193 3300053728 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0.34
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 5.52
Rhizosphere 93.45
Stem 0
Stem Tuber 0
Unclassified 23.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100351707 3300005329 Bacteria 1403
2 MRS1b_contig_9095079 2162886011 Bacteria 1808
3 MBSR1b_contig_1516351 2162886012 Unclassified 1401
4 Ga0065715_10001487 3300005293 Bacteria 6126
5 Ga0070676_10339786 3300005328 Bacteria 1029
6 Ga0070670_100008872 3300005331 Bacteria 8582
7 Ga0068868_100460060 3300005338 Unclassified 1108
8 Ga0070660_100246330 3300005339 Bacteria 1456
9 Ga0070689_100081385 3300005340 Bacteria 2543
10 Ga0070689_101672380 3300005340 Unclassified 579
11 Ga0070668_100381299 3300005347 Bacteria 1200
12 Ga0070675_101455438 3300005354 Bacteria 632
13 Ga0070671_100101630 3300005355 Bacteria 2412
14 Ga0070671_100644429 3300005355 Bacteria 917
15 Ga0070671_100818706 3300005355 Bacteria 811
16 Ga0070674_100153252 3300005356 Bacteria 1741
17 Ga0070673_100800692 3300005364 Bacteria 870
18 Ga0070688_100003483 3300005365 Bacteria 8110
19 Ga0070659_100377715 3300005366 Bacteria 1193
20 Ga0070659_100504649 3300005366 Bacteria 1031
21 Ga0070667_100197224 3300005367 Bacteria 1785
22 Ga0070713_100124104 3300005436 Bacteria 2269
23 Ga0070701_10288489 3300005438 Bacteria 1005
24 Ga0070711_100429598 3300005439 Bacteria 1078
25 Ga0070705_100376342 3300005440 Unclassified 1044
26 Ga0070700_100095240 3300005441 Bacteria 1951
27 Ga0070678_100223515 3300005456 Bacteria 1566
28 Ga0070678_101564414 3300005456 Bacteria 618
29 Ga0070678_101955562 3300005456 Unclassified 554
30 Ga0070662_101098491 3300005457 Unclassified 682
31 Ga0070685_10008469 3300005466 Bacteria 5288
32 Ga0070707_100711582 3300005468 Bacteria 967
33 Ga0070698_100661413 3300005471 Bacteria 986
34 Ga0070699_100420368 3300005518 Bacteria 1210
35 Ga0070699_101196828 3300005518 Unclassified 697
36 Ga0070679_100212679 3300005530 Bacteria 1897
37 Ga0068853_100278707 3300005539 Bacteria 1541
38 Ga0068853_101685907 3300005539 Bacteria 614
39 Ga0070672_100122682 3300005543 Bacteria 2129
40 Ga0070695_100742133 3300005545 Unclassified 782
41 Ga0070665_100110465 3300005548 Bacteria 2752
42 Ga0070704_100198535 3300005549 Bacteria 1618
43 Ga0070704_100799838 3300005549 Bacteria 842
44 Ga0068855_100630580 3300005563 Bacteria 1153
45 Ga0068857_100782919 3300005577 Bacteria 910
46 Ga0068859_100132235 3300005617 Bacteria 2567
47 Ga0068859_100927799 3300005617 Bacteria 955
48 Ga0068864_100008994 3300005618 Bacteria 8237
49 Ga0068863_100007281 3300005841 Bacteria 10841
50 Ga0068863_100884100 3300005841 Bacteria 893
51 Ga0068860_101097262 3300005843 Bacteria 815
52 Ga0068860_101894182 3300005843 Unclassified 618
53 Ga0068862_100020503 3300005844 Bacteria 5522
54 Ga0081539_10000535 3300005985 Bacteria 78890
55 Ga0070717_10774263 3300006028 Bacteria 872
56 Ga0070717_10940549 3300006028 Bacteria 787
57 Ga0070712_101316679 3300006175 Bacteria 630
58 Ga0097621_100144838 3300006237 Bacteria 2033
59 Ga0097621_100320276 3300006237 Unclassified 1373
60 Ga0068871_100088456 3300006358 Bacteria 2577
61 Ga0068871_102053536 3300006358 Bacteria 544
62 Ga0075428_100057924 3300006844 Bacteria 4242
63 Ga0075430_100578258 3300006846 Unclassified 927
64 Ga0075430_100583326 3300006846 Bacteria 922
65 Ga0075431_100522316 3300006847 Bacteria 1177
66 Ga0075433_10440671 3300006852 Bacteria 1148
67 Ga0075433_11343751 3300006852 Unclassified 619
68 Ga0075429_101692960 3300006880 Bacteria 549
69 Ga0097620_100132241 3300006931 Bacteria 2567
70 Ga0097620_100927804 3300006931 Bacteria 955
71 Ga0099795_10063206 3300007788 Bacteria 1379
72 Ga0111539_10002972 3300009094 Bacteria 22492
73 Ga0105245_10106772 3300009098 Bacteria 2599
74 Ga0105247_10581193 3300009101 Bacteria 828
75 Ga0114129_10326506 3300009147 Bacteria 2039
76 Ga0114129_10605521 3300009147 Bacteria 1419
77 Ga0114129_10758848 3300009147 Bacteria 1241
78 Ga0114129_11996930 3300009147 Unclassified 701
79 Ga0105243_10919042 3300009148 Unclassified 872
80 Ga0105242_10201427 3300009176 Bacteria 1768
81 Ga0105242_10517310 3300009176 Unclassified 1138
82 Ga0105248_10008443 3300009177 Bacteria 11302
83 Ga0105249_10103233 3300009553 Bacteria 2685
84 Ga0105249_10688745 3300009553 Bacteria 1081
85 Ga0099796_10020276 3300010159 Bacteria 2029
86 Ga0105239_10352490 3300010375 Unclassified 1662
87 Ga0157370_11757151 3300013104 Bacteria 557
88 Ga0157378_10527283 3300013297 Unclassified 1183
89 Ga0157378_10878083 3300013297 Bacteria 926
90 Ga0163162_10106375 3300013306 Bacteria 2901
91 Ga0157375_10145121 3300013308 Bacteria 2504
92 Ga0163163_10098040 3300014325 Bacteria 2952
93 Ga0163163_10827142 3300014325 Bacteria 989
94 Ga0157380_11382963 3300014326 Bacteria 754
95 Ga0157377_10374235 3300014745 Unclassified 962
96 Ga0163161_12047682 3300017792 Unclassified 509
97 Ga0213875_10000152 3300021388 Bacteria 73219
98 Ga0207697_10012222 3300025315 Bacteria 3607
99 Ga0207645_10492817 3300025907 Bacteria 829
100 Ga0207663_10287697 3300025916 Bacteria 1223
101 Ga0207657_10276902 3300025919 Bacteria 1333
102 Ga0207652_10175472 3300025921 Bacteria 1925
103 Ga0207646_11021091 3300025922 Bacteria 730
104 Ga0207681_10053299 3300025923 Bacteria 2746
105 Ga0207650_10005829 3300025925 Bacteria 8405
106 Ga0207650_11248676 3300025925 Bacteria 632
107 Ga0207659_10343109 3300025926 Bacteria 1237
108 Ga0207700_10244866 3300025928 Bacteria 1529
109 Ga0207644_10083552 3300025931 Bacteria 2365
110 Ga0207644_10758072 3300025931 Bacteria 811
111 Ga0207690_11011309 3300025932 Bacteria 692
112 Ga0207706_10979279 3300025933 Unclassified 711
113 Ga0207704_10200972 3300025938 Bacteria 1458
114 Ga0207691_10087035 3300025940 Bacteria 2803
115 Ga0207711_10046116 3300025941 Bacteria 3724
116 Ga0207651_10622669 3300025960 Bacteria 945
117 Ga0207712_10018200 3300025961 Bacteria 4573
118 Ga0207658_10117902 3300025986 Bacteria 2111
119 Ga0207677_11765565 3300026023 Bacteria 574
120 Ga0207708_10130439 3300026075 Bacteria 1965
121 Ga0207708_10789738 3300026075 Unclassified 817
122 Ga0207641_10006230 3300026088 Bacteria 10091
123 Ga0207641_11290127 3300026088 Bacteria 731
124 Ga0207676_10300929 3300026095 Bacteria 1464
125 Ga0207683_11842003 3300026121 Unclassified 554
126 Ga0209179_1026657 3300027512 Bacteria 1161
127 Ga0209974_10071553 3300027876 Unclassified 1184
128 Ga0207428_10320121 3300027907 Bacteria 1145
129 Ga0265324_10155168 3300029957 Unclassified 777
130 Ga0265760_10008959 3300031090 Plasmid 2858
131 Ga0265325_10139775 3300031241 Bacteria 1153
132 Ga0265316_10783836 3300031344 Bacteria 669
133 Ga0265316_10912106 3300031344 Unclassified 613
134 Ga0307416_100072812 3300032002 Bacteria 2862
135 Ga0373934_0162012 3300035086 Unclassified 918
136 Ga0373934_0193838 3300035086 Unclassified 836
137 Ga0373945_0051487 3300035116 Bacteria 1515
138 Ga0373953_0055167 3300035117 Bacteria 1613
139 Ga0373956_0095746 3300035119 Unclassified 1373
140 Ga0373957_0037461 3300035120 Bacteria 1812
141 Ga0373943_0009833 3300035170 Bacteria 4283
142 Ga0373946_0049341 3300035171 Bacteria 1755
143 Ga0373946_0138557 3300035171 Bacteria 1126
144 Ga0373955_0021388 3300035172 Bacteria 3265
145 Ga0373955_0302332 3300035172 Bacteria 965
146 Ga0373955_0452182 3300035172 Bacteria 783
147 Ga0373935_0024540 3300035692 Bacteria 3712
148 Ga0373927_0049022 3300035695 Bacteria 2731
149 Ga0373927_0308722 3300035695 Unclassified 1041
150 Ga0373927_0322649 3300035695 Bacteria 1017
151 Ga0373947_0033435 3300035725 Bacteria 3036
152 Ga0373947_0084377 3300035725 Unclassified 1971
153 Ga0373937_0044014 3300036401 Bacteria 4077
154 Ga0373937_0221480 3300036401 Bacteria 1781
155 Ga0373925_0204204 3300037068 Bacteria 1572
156 Ga0373925_1080927 3300037068 Unclassified 660
157 Ga0373925_1298572 3300037068 Bacteria 597
158 Ga0436364_1013423 3300037853 Bacteria 35685
159 Ga0436361_0504297 3300039447 Unclassified 961
160 Ga0466969_0067977 3300044656 Bacteria 1718
161 Ga0466966_0134249 3300044684 Bacteria 1514
162 Ga0466961_0036072 3300044693 Bacteria 3174
163 Ga0466959_0114422 3300045049 Bacteria 1923
164 Ga0495592_0102216 3300046454 Bacteria 2041
165 Ga0495592_0183535 3300046454 Bacteria 1423
166 Ga0495592_0381395 3300046454 Bacteria 897
167 Ga0495603_0258374 3300046455 Bacteria 1002
168 Ga0495629_0143094 3300046459 Bacteria 1663
169 Ga0495629_0579831 3300046459 Unclassified 751
170 Ga0495641_0319820 3300046461 Unclassified 700
171 Ga0495651_0325367 3300046462 Bacteria 1023
172 Ga0495651_0947040 3300046462 Unclassified 525
173 Ga0495653_0216178 3300046463 Bacteria 1291
174 Ga0495580_0114661 3300046472 Bacteria 1872
175 Ga0495582_0208707 3300046473 Unclassified 1116
176 Ga0495582_0324932 3300046473 Bacteria 885
177 Ga0495639_0023174 3300046475 Bacteria 2727
178 Ga0495639_0038084 3300046475 Bacteria 2158
179 Ga0495639_0090492 3300046475 Bacteria 1435
180 Ga0495639_0317128 3300046475 Bacteria 779
181 Ga0495662_0072940 3300046476 Bacteria 1665
182 Ga0495662_0134195 3300046476 Bacteria 1217
183 Ga0495662_0237154 3300046476 Unclassified 899
184 Ga0495662_0502113 3300046476 Unclassified 595
185 Ga0495664_0033363 3300046477 Bacteria 3025
186 Ga0495664_0325033 3300046477 Bacteria 927
187 Ga0495607_0269716 3300046501 Bacteria 812
188 Ga0495618_0002147 3300046514 Bacteria 12918
189 Ga0495620_0074568 3300046515 Bacteria 1382
190 Ga0495628_0385218 3300046516 Bacteria 1026
191 Ga0495628_0721328 3300046516 Unclassified 703
192 Ga0495630_0086831 3300046517 Unclassified 2362
193 Ga0495666_0115531 3300046526 Bacteria 1259
194 Ga0495642_0110096 3300046528 Bacteria 1177
195 Ga0495652_0074357 3300046529 Bacteria 2826
196 Ga0495665_0086046 3300046531 Unclassified 1652
197 Ga0495665_0515801 3300046531 Unclassified 601
198 Ga0495640_0023099 3300046533 Bacteria 4539
199 Ga0495640_0181171 3300046533 Bacteria 1342
200 Ga0495586_0032893 3300046535 Bacteria 2782
201 Ga0495586_0049451 3300046535 Bacteria 2273
202 Ga0495645_0045910 3300046543 Bacteria 3186
203 Ga0495667_0087824 3300046559 Bacteria 2016
204 Ga0495667_0976998 3300046559 Unclassified 517
205 Ga0495656_0372815 3300046615 Unclassified 743
206 Ga0495634_0026043 3300046642 Bacteria 4085
207 Ga0495634_0064660 3300046642 Bacteria 2424
208 Ga0495634_0082110 3300046642 Bacteria 2107
209 Ga0495634_0305281 3300046642 Bacteria 961
210 Ga0495634_0353352 3300046642 Bacteria 880
211 Ga0495635_0006171 3300046663 Bacteria 8352
212 Ga0495635_0040464 3300046663 Bacteria 3221
213 Ga0495635_0867344 3300046663 Unclassified 579
214 Ga0495599_0171993 3300046678 Unclassified 1336
215 Ga0495599_0709695 3300046678 Unclassified 579
216 Ga0495646_0211712 3300046680 Bacteria 1051
217 Ga0495646_0412110 3300046680 Unclassified 701
218 Ga0495647_0056046 3300046681 Bacteria 1544
219 Ga0495658_0522021 3300046683 Bacteria 760
220 Ga0495669_0094862 3300046684 Bacteria 1381
221 Ga0495613_0010996 3300046689 Bacteria 6722
222 Ga0495624_0082292 3300046690 Bacteria 1992
223 Ga0495624_0888493 3300046690 Unclassified 525
224 Ga0495600_0491641 3300046809 Unclassified 755
225 Ga0495581_0134350 3300047315 Bacteria 1442
226 Ga0495581_0172491 3300047315 Bacteria 1265
227 Ga0495604_0207405 3300047317 Bacteria 1356
228 Ga0495674_0103725 3300047319 Bacteria 2417
229 Ga0495674_0458216 3300047319 Bacteria 1024
230 Ga0495674_0691540 3300047319 Unclassified 801
231 Ga0495676_0044294 3300047321 Unclassified 3633
232 Ga0495676_0280997 3300047321 Bacteria 1127
233 Ga0495680_0307186 3300047322 Bacteria 1113
234 Ga0495680_0469768 3300047322 Bacteria 858
235 Ga0495675_0551619 3300047444 Bacteria 657
236 Ga0495679_171686 3300047446 Unclassified 577
237 Ga0495684_0062681 3300047471 Unclassified 2828
238 Ga0495684_0379828 3300047471 Bacteria 997
239 Ga0495684_0420352 3300047471 Bacteria 934
240 Ga0495684_0590115 3300047471 Bacteria 751
241 Ga0495684_0604694 3300047471 Unclassified 739
242 Ga0495602_0567554 3300048088 Unclassified 784
243 Ga0496100_0049819 3300048903 Bacteria 2711
244 Ga0496101_0027442 3300048904 Bacteria 3967
245 Ga0496104_0004294 3300048907 Bacteria 12388
246 Ga0496106_0084583 3300048909 Bacteria 2441
247 Ga0496107_0177979 3300048910 Bacteria 1579
248 Ga0496107_0626716 3300048910 Unclassified 794
249 Ga0496108_0012070 3300048911 Bacteria 7025
250 Ga0496109_0024138 3300048912 Bacteria 5401
251 Ga0496110_0003958 3300048913 Bacteria 11395
252 Ga0496110_1508381 3300048913 Unclassified 582
253 Ga0496111_0030486 3300048914 Bacteria 3835
254 Ga0496112_0001553 3300048915 Bacteria 17747
255 Ga0496113_0072432 3300048916 Bacteria 2622
256 Ga0496113_0632702 3300048916 Unclassified 856
257 Ga0496114_0112959 3300048917 Bacteria 2329
258 Ga0496114_0656471 3300048917 Unclassified 922
259 Ga0501047_0606659 3300049581 Bacteria 916
260 Ga0501070_0359141 3300049586 Bacteria 1182
261 Ga0501080_0135285 3300049742 Bacteria 2281
262 Ga0501080_0450423 3300049742 Bacteria 1154
263 Ga0501045_0873620 3300049824 Bacteria 661
264 nmdc:mga05p37_170001_c1 3300050507 Bacteria 2659
265 nmdc:mga05p37_408359_c1 3300050507 Bacteria 1584
266 nmdc:mga05p37_596069_c1 3300050507 Bacteria 1248
267 nmdc:mga09592_1468665_c1 3300050508 Bacteria 556
268 nmdc:mga09592_670322_c1 3300050508 Bacteria 884
269 nmdc:mga08y16_144158_c1 3300050511 Bacteria 2476
270 nmdc:mga08x19_1051413_c1 3300050514 Unclassified 578
271 nmdc:mga0a205_528678_c1 3300050515 Unclassified 1035
272 nmdc:mga0a205_54659_c1 3300050515 Bacteria 1938
273 nmdc:mga0a205_588871_c1 3300050515 Bacteria 966
274 nmdc:mga0a205_983118_c1 3300050515 Bacteria 691
275 Ga0495601_0020016 3300053077 Bacteria 4084
276 Ga0495601_0276519 3300053077 Bacteria 1095
277 Ga0495601_0377993 3300053077 Bacteria 919
278 Ga0495601_0737080 3300053077 Unclassified 627
279 Ga0495601_0818180 3300053077 Unclassified 591
280 Ga0495612_0011324 3300053078 Bacteria 3594
281 Ga0495612_0484807 3300053078 Unclassified 566
282 Ga0495595_0025956 3300053084 Bacteria 2599
283 Ga0495595_0034896 3300053084 Bacteria 2277
284 Ga0495595_0140398 3300053084 Bacteria 1185
285 Ga0495595_0571392 3300053084 Bacteria 578
286 Ga0495619_0004442 3300053085 Bacteria 8947
287 Ga0495619_0007366 3300053085 Bacteria 6970
288 Ga0495619_0537397 3300053085 Bacteria 802
289 Ga0495619_0789325 3300053085 Unclassified 643
290 Ga0500657_156452 3300053728 Unclassified 835
291 Ga0070683_100351707
292 MRS1b_contig_9095079
293 MBSR1b_contig_1516351
294 Ga0065715_10001487
295 Ga0070676_10339786
296 Ga0070670_100008872
297 Ga0068868_100460060
298 Ga0070660_100246330
299 Ga0070689_100081385
300 Ga0070689_101672380
301 Ga0070668_100381299
302 Ga0070675_101455438
303 Ga0070671_100101630
304 Ga0070671_100644429
305 Ga0070671_100818706
306 Ga0070674_100153252
307 Ga0070673_100800692
308 Ga0070688_100003483
309 Ga0070659_100377715
310 Ga0070659_100504649
311 Ga0070667_100197224
312 Ga0070713_100124104
313 Ga0070701_10288489
314 Ga0070711_100429598
315 Ga0070705_100376342
316 Ga0070700_100095240
317 Ga0070678_100223515
318 Ga0070678_101564414
319 Ga0070678_101955562
320 Ga0070662_101098491
321 Ga0070685_10008469
322 Ga0070707_100711582
323 Ga0070698_100661413
324 Ga0070699_100420368
325 Ga0070699_101196828
326 Ga0070679_100212679
327 Ga0068853_100278707
328 Ga0068853_101685907
329 Ga0070672_100122682
330 Ga0070695_100742133
331 Ga0070665_100110465
332 Ga0070704_100198535
333 Ga0070704_100799838
334 Ga0068855_100630580
335 Ga0068857_100782919
336 Ga0068859_100132235
337 Ga0068859_100927799
338 Ga0068864_100008994
339 Ga0068863_100007281
340 Ga0068863_100884100
341 Ga0068860_101097262
342 Ga0068860_101894182
343 Ga0068862_100020503
344 Ga0081539_10000535
345 Ga0070717_10774263
346 Ga0070717_10940549
347 Ga0070712_101316679
348 Ga0097621_100144838
349 Ga0097621_100320276
350 Ga0068871_100088456
351 Ga0068871_102053536
352 Ga0075428_100057924
353 Ga0075430_100578258
354 Ga0075430_100583326
355 Ga0075431_100522316
356 Ga0075433_10440671
357 Ga0075433_11343751
358 Ga0075429_101692960
359 Ga0097620_100132241
360 Ga0097620_100927804
361 Ga0099795_10063206
362 Ga0111539_10002972
363 Ga0105245_10106772
364 Ga0105247_10581193
365 Ga0114129_10326506
366 Ga0114129_10605521
367 Ga0114129_10758848
368 Ga0114129_11996930
369 Ga0105243_10919042
370 Ga0105242_10201427
371 Ga0105242_10517310
372 Ga0105248_10008443
373 Ga0105249_10103233
374 Ga0105249_10688745
375 Ga0099796_10020276
376 Ga0105239_10352490
377 Ga0157370_11757151
378 Ga0157378_10527283
379 Ga0157378_10878083
380 Ga0163162_10106375
381 Ga0157375_10145121
382 Ga0163163_10098040
383 Ga0163163_10827142
384 Ga0157380_11382963
385 Ga0157377_10374235
386 Ga0163161_12047682
387 Ga0213875_10000152
388 Ga0207697_10012222
389 Ga0207645_10492817
390 Ga0207663_10287697
391 Ga0207657_10276902
392 Ga0207652_10175472
393 Ga0207646_11021091
394 Ga0207681_10053299
395 Ga0207650_10005829
396 Ga0207650_11248676
397 Ga0207659_10343109
398 Ga0207700_10244866
399 Ga0207644_10083552
400 Ga0207644_10758072
401 Ga0207690_11011309
402 Ga0207706_10979279
403 Ga0207704_10200972
404 Ga0207691_10087035
405 Ga0207711_10046116
406 Ga0207651_10622669
407 Ga0207712_10018200
408 Ga0207658_10117902
409 Ga0207677_11765565
410 Ga0207708_10130439
411 Ga0207708_10789738
412 Ga0207641_10006230
413 Ga0207641_11290127
414 Ga0207676_10300929
415 Ga0207683_11842003
416 Ga0209179_1026657
417 Ga0209974_10071553
418 Ga0207428_10320121
419 Ga0265324_10155168
420 Ga0265760_10008959
421 Ga0265325_10139775
422 Ga0265316_10783836
423 Ga0265316_10912106
424 Ga0307416_100072812
425 Ga0373934_0162012
426 Ga0373934_0193838
427 Ga0373945_0051487
428 Ga0373953_0055167
429 Ga0373956_0095746
430 Ga0373957_0037461
431 Ga0373943_0009833
432 Ga0373946_0049341
433 Ga0373946_0138557
434 Ga0373955_0021388
435 Ga0373955_0302332
436 Ga0373955_0452182
437 Ga0373935_0024540
438 Ga0373927_0049022
439 Ga0373927_0308722
440 Ga0373927_0322649
441 Ga0373947_0033435
442 Ga0373947_0084377
443 Ga0373937_0044014
444 Ga0373937_0221480
445 Ga0373925_0204204
446 Ga0373925_1080927
447 Ga0373925_1298572
448 Ga0436364_1013423
449 Ga0436361_0504297
450 Ga0466969_0067977
451 Ga0466966_0134249
452 Ga0466961_0036072
453 Ga0466959_0114422
454 Ga0495592_0102216
455 Ga0495592_0183535
456 Ga0495592_0381395
457 Ga0495603_0258374
458 Ga0495629_0143094
459 Ga0495629_0579831
460 Ga0495641_0319820
461 Ga0495651_0325367
462 Ga0495651_0947040
463 Ga0495653_0216178
464 Ga0495580_0114661
465 Ga0495582_0208707
466 Ga0495582_0324932
467 Ga0495639_0023174
468 Ga0495639_0038084
469 Ga0495639_0090492
470 Ga0495639_0317128
471 Ga0495662_0072940
472 Ga0495662_0134195
473 Ga0495662_0237154
474 Ga0495662_0502113
475 Ga0495664_0033363
476 Ga0495664_0325033
477 Ga0495607_0269716
478 Ga0495618_0002147
479 Ga0495620_0074568
480 Ga0495628_0385218
481 Ga0495628_0721328
482 Ga0495630_0086831
483 Ga0495666_0115531
484 Ga0495642_0110096
485 Ga0495652_0074357
486 Ga0495665_0086046
487 Ga0495665_0515801
488 Ga0495640_0023099
489 Ga0495640_0181171
490 Ga0495586_0032893
491 Ga0495586_0049451
492 Ga0495645_0045910
493 Ga0495667_0087824
494 Ga0495667_0976998
495 Ga0495656_0372815
496 Ga0495634_0026043
497 Ga0495634_0064660
498 Ga0495634_0082110
499 Ga0495634_0305281
500 Ga0495634_0353352
501 Ga0495635_0006171
502 Ga0495635_0040464
503 Ga0495635_0867344
504 Ga0495599_0171993
505 Ga0495599_0709695
506 Ga0495646_0211712
507 Ga0495646_0412110
508 Ga0495647_0056046
509 Ga0495658_0522021
510 Ga0495669_0094862
511 Ga0495613_0010996
512 Ga0495624_0082292
513 Ga0495624_0888493
514 Ga0495600_0491641
515 Ga0495581_0134350
516 Ga0495581_0172491
517 Ga0495604_0207405
518 Ga0495674_0103725
519 Ga0495674_0458216
520 Ga0495674_0691540
521 Ga0495676_0044294
522 Ga0495676_0280997
523 Ga0495680_0307186
524 Ga0495680_0469768
525 Ga0495675_0551619
526 Ga0495679_171686
527 Ga0495684_0062681
528 Ga0495684_0379828
529 Ga0495684_0420352
530 Ga0495684_0590115
531 Ga0495684_0604694
532 Ga0495602_0567554
533 Ga0496100_0049819
534 Ga0496101_0027442
535 Ga0496104_0004294
536 Ga0496106_0084583
537 Ga0496107_0177979
538 Ga0496107_0626716
539 Ga0496108_0012070
540 Ga0496109_0024138
541 Ga0496110_0003958
542 Ga0496110_1508381
543 Ga0496111_0030486
544 Ga0496112_0001553
545 Ga0496113_0072432
546 Ga0496113_0632702
547 Ga0496114_0112959
548 Ga0496114_0656471
549 Ga0501047_0606659
550 Ga0501070_0359141
551 Ga0501080_0135285
552 Ga0501080_0450423
553 Ga0501045_0873620
554 nmdc:mga05p37_170001_c1
555 nmdc:mga05p37_408359_c1
556 nmdc:mga05p37_596069_c1
557 nmdc:mga09592_1468665_c1
558 nmdc:mga09592_670322_c1
559 nmdc:mga08y16_144158_c1
560 nmdc:mga08x19_1051413_c1
561 nmdc:mga0a205_528678_c1
562 nmdc:mga0a205_54659_c1
563 nmdc:mga0a205_588871_c1
564 nmdc:mga0a205_983118_c1
565 Ga0495601_0020016
566 Ga0495601_0276519
567 Ga0495601_0377993
568 Ga0495601_0737080
569 Ga0495601_0818180
570 Ga0495612_0011324
571 Ga0495612_0484807
572 Ga0495595_0025956
573 Ga0495595_0034896
574 Ga0495595_0140398
575 Ga0495595_0571392
576 Ga0495619_0004442
577 Ga0495619_0007366
578 Ga0495619_0537397
579 Ga0495619_0789325
580 Ga0500657_156452

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

2

131

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.8875 1 143
5k8j-assembly1.cif.gz_B structure of caulobacter crescentus vapbc1 (apo form) 0.8803 1 134
2h1c-assembly1.cif.gz_A crystal structure of fitacb from neisseria gonorrhoeae 0.8696 1 138
3tnd-assembly1.cif.gz_G crystal structure of shigella flexneri vapbc toxin-antitoxin complex 0.8676 2 136
3zvk-assembly1.cif.gz_B crystal structure of vapbc2 from rickettsia felis bound to a dna fragment from their promoter 0.8672 2 134
ID Description Score Start End Superfamily
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9054 1 137 3.40.50.1010
3zvkB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8672 2 134 3.40.50.1010
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8642 1 137 3.40.50.1010
5k8jC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8599 1 134 3.40.50.1010
af_O07783_4_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8562 2 134 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A2V8HIE2-F1-model_v4 VapC toxin family PIN domain ribonuclease 1.004 74 137
AF-V7J3Y9-F1-model_v4 deleted 0.9848 1 137
AF-A0A518C1B5-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9762 1 137 GO:0000287
GO:0004540
GO:0090729
AF-A0A537RIK5-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9762 1 138 GO:0000287
GO:0004540
GO:0090729
AF-A0A4Y5Z890-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9751 1 140 GO:0000287
GO:0004540
GO:0090729

Map