F389509

General Info

Members Datasets Scaffolds Average Seq Length
289 195 578 680

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995467341
Length 807
Sequence LEVNDLTTHIQISRGVVQAVDGVSFHLEAGETLGLVGESGCGKSMTGLSLMGLLPPGGRLVNNSSVKLDGRELVGLSDGELRKIRGNEIAMVFQDPMSSLDPTKTIGYQVAEPVLLHRGVSKAEAMDRAAEVLGLVGLPKPKERLKDYPHQLSGGLRQRVMIAMALACEPKVLIADEPTTALDVTIQAQILTLLNDLKERLGMAIILVTHDMGVVAGHSDRINVMYAGRIVESTETQQLFDGMRHPYTQGLLASIPRLAQDNTQKLFTVPGLPPDLSNPPTGCRFAARCTYVTDQCRENDPELKGPEGHVFACFHPVSGPLDLTLLSEPPVTAEEAAAVAAEAEQKAEELAEKIELTKAEATDEAEATEAADATESADAPEDGKPEASDAAAEADDAATGDAKDEAKAEEKAEAAAEEADAEAAEAEAAVVAKATAVVEAAEAEAVAATVATPREESKAAPAAKASRPLLEVVDLVKEFPVGGGAFSRNKAVVHAVSGVSLSLGYGETFGLVGESGCGKTTLGRMIVGLEKPNSGRVTLDGTEVGSLRGKALRRHRRDLQMMFQDPYASLDPRMRVGAILREPLQIQSIGSAQEQMARVSELLDEVGLPKSALERFPHEFSGGQRQRIGLARALALHPKVIVADEPVSALDVSIRAQVLNLMKRLQASHDLSYVVISHDLAVVKYLADRIGVMYLGKMVEVGSGQDIYERAAHPYTAGLLEAIPVPEPELERAKRGGGIKGELPSPVAPPSGCRFRTRCPLAQDRCAVEEPAMRLFGDGHAAACHFPLQTPVSDTPVTVATPAGTAE

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
35 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
57 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
66 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
67 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
68 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
69 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
70 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
97 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
110 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
111 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
133 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
134 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
135 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
159 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
160 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
183 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
184 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
185 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
186 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
187 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
188 2858868258 Micromonospora sp. MH33 Isolate Unclassified
189 2862574272 Streptomyces sp. AcE210 Isolate Nodule
190 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
191 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
192 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
193 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
194 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
195 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.43
Metatranscriptomes 1.73
Isolates 4.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.73
Nodule 0.35
Rhizoplane 5.54
Rhizosphere 82.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000095 3300005329 Bacteria 57838
2 Ga0070683_100048585 3300005329 Bacteria 3923
3 Ga0070680_100013179 3300005336 Bacteria 6436
4 Ga0070674_100001827 3300005356 Bacteria 11548
5 Ga0070659_100022373 3300005366 Bacteria 4826
6 Ga0070714_100001399 3300005435 Bacteria 17490
7 Ga0070714_100025282 3300005435 Bacteria 4898
8 Ga0070713_100015780 3300005436 Bacteria 5660
9 Ga0070711_100002703 3300005439 Bacteria 10172
10 Ga0070708_100007237 3300005445 Bacteria 8869
11 Ga0070707_100031462 3300005468 Bacteria 5055
12 Ga0070698_100000013 3300005471 Bacteria 114652
13 Ga0070698_100000532 3300005471 Bacteria 40626
14 Ga0070699_100001722 3300005518 Bacteria 19940
15 Ga0070684_100000240 3300005535 Bacteria 37924
16 Ga0070697_100007669 3300005536 Bacteria 8403
17 Ga0070704_100031119 3300005549 Bacteria 3585
18 Ga0068855_100021677 3300005563 Bacteria 7706
19 Ga0068857_100038922 3300005577 Bacteria 4210
20 Ga0068856_100010726 3300005614 Bacteria 8902
21 Ga0068856_100046879 3300005614 Bacteria 4257
22 Ga0068859_100069356 3300005617 Bacteria 3560
23 Ga0068866_10043336 3300005718 Bacteria 2245
24 Ga0081455_10012788 3300005937 Bacteria 8342
25 Ga0070716_100022275 3300006173 Bacteria 3347
26 Ga0097620_100069355 3300006931 Bacteria 3560
27 Ga0075435_100006386 3300007076 Bacteria 8332
28 Ga0075435_100011505 3300007076 Bacteria 6515
29 Ga0105240_10066633 3300009093 Bacteria 4466
30 Ga0105240_10084008 3300009093 Bacteria 3905
31 Ga0111539_10000133 3300009094 Bacteria 84861
32 Ga0105245_10000721 3300009098 Bacteria 29771
33 Ga0105245_10004457 3300009098 Bacteria 12382
34 Ga0114129_10084523 3300009147 Bacteria 4406
35 Ga0114129_10090858 3300009147 Bacteria 4232
36 Ga0105238_10019244 3300009551 Bacteria 6954
37 Ga0105238_10061625 3300009551 Bacteria 3753
38 Ga0105239_10045678 3300010375 Bacteria 4801
39 Ga0105239_10121260 3300010375 Bacteria 2904
40 Ga0105246_10018024 3300011119 Bacteria 4496
41 Ga0157369_10017501 3300013105 Bacteria 8055
42 Ga0157380_10003651 3300014326 Bacteria 10584
43 Ga0182008_10024029 3300014497 Bacteria 3105
44 Ga0157377_10014174 3300014745 Bacteria 4051
45 Ga0197907_10641766 3300020069 Bacteria 5993
46 Ga0206354_11128276 3300020081 Bacteria 3875
47 Ga0213874_10001361 3300021377 Bacteria 5046
48 Ga0213875_10000060 3300021388 Bacteria 135020
49 Ga0224712_10001557 3300022467 Bacteria 5354
50 Ga0224712_10003620 3300022467 Bacteria 4047
51 Ga0207692_10001218 3300025898 Bacteria 9546
52 Ga0207695_10009164 3300025913 Bacteria 12279
53 Ga0207663_10015298 3300025916 Bacteria 4231
54 Ga0207657_10102103 3300025919 Bacteria 2379
55 Ga0207652_10008203 3300025921 Bacteria 8387
56 Ga0207646_10005504 3300025922 Bacteria 13308
57 Ga0207694_10000242 3300025924 Bacteria 52657
58 Ga0207687_10000467 3300025927 Bacteria 27625
59 Ga0207687_10054974 3300025927 Bacteria 2788
60 Ga0207700_10004894 3300025928 Bacteria 7956
61 Ga0207700_10006095 3300025928 Bacteria 7264
62 Ga0207664_10002007 3300025929 Bacteria 13401
63 Ga0207664_10016506 3300025929 Bacteria 5388
64 Ga0207664_10060303 3300025929 Bacteria 3023
65 Ga0207664_10073202 3300025929 Bacteria 2764
66 Ga0207665_10015803 3300025939 Bacteria 4954
67 Ga0207665_10051649 3300025939 Bacteria 2768
68 Ga0207661_10006314 3300025944 Bacteria 8387
69 Ga0207661_10023028 3300025944 Bacteria 4702
70 Ga0207674_10035247 3300026116 Bacteria 5224
71 Ga0207683_10010514 3300026121 Bacteria 7896
72 Ga0207683_10045942 3300026121 Bacteria 3820
73 Ga0207428_10000040 3300027907 Bacteria 210887
74 Ga0268264_10111640 3300028381 Bacteria 2395
75 Ga0265319_1000844 3300028563 Bacteria 19555
76 Ga0265340_10000440 3300031247 Bacteria 22381
77 Ga0307513_10037064 3300031456 Bacteria 5430
78 Ga0307508_10000366 3300031616 Bacteria 54777
79 Ga0307413_10000674 3300031824 Bacteria 11636
80 Ga0307410_10005164 3300031852 Bacteria 6873
81 Ga0307407_10006186 3300031903 Bacteria 5289
82 Ga0307416_100080559 3300032002 Bacteria 2749
83 Ga0307414_10043944 3300032004 Bacteria 3047
84 Ga0373934_0000256 3300035086 Bacteria 19092
85 Ga0373944_0005654 3300035089 Bacteria 3298
86 Ga0373945_0001204 3300035116 Bacteria 7874
87 Ga0373953_0015596 3300035117 Bacteria 2757
88 Ga0373954_0023122 3300035118 Bacteria 2823
89 Ga0373957_0000448 3300035120 Bacteria 10352
90 Ga0373943_0003816 3300035170 Bacteria 6848
91 Ga0373955_0001516 3300035172 Bacteria 9915
92 Ga0373955_0024003 3300035172 Bacteria 3113
93 Ga0373924_0001332 3300035410 Bacteria 7959
94 Ga0373935_0009729 3300035692 Bacteria 5757
95 Ga0373933_0000548 3300035724 Bacteria 23394
96 Ga0373937_0001445 3300036401 Bacteria 19858
97 Ga0372808_000186 3300036459 Bacteria 3822
98 Ga0373925_0000824 3300037068 Bacteria 28544
99 Ga0373925_0015253 3300037068 Bacteria 5555
100 Ga0436364_0022317 3300037853 Bacteria 87829
101 Ga0436364_0222985 3300037853 Bacteria 8294
102 Ga0436364_0884952 3300037853 Bacteria 6157
103 Ga0436364_1009484 3300037853 Bacteria 3508
104 Ga0436364_1273639 3300037853 Bacteria 5631
105 Ga0436364_1481155 3300037853 Bacteria 87951
106 Ga0400483_118448 3300039062 Bacteria 9979
107 Ga0436365_1104401 3300039437 Bacteria 10444
108 Ga0436365_1264951 3300039437 Bacteria 6874
109 Ga0436365_1399953 3300039437 Bacteria 4923
110 Ga0436363_0700452 3300039450 Bacteria 5085
111 Ga0436363_0739703 3300039450 Bacteria 2541
112 Ga0466965_0005110 3300044683 Bacteria 5891
113 Ga0466966_0000795 3300044684 Bacteria 20106
114 Ga0466966_0009583 3300044684 Bacteria 6410
115 Ga0466963_0000087 3300044694 Bacteria 31983
116 Ga0466963_0000841 3300044694 Bacteria 15418
117 Ga0466963_0001581 3300044694 Bacteria 12361
118 Ga0466963_0007381 3300044694 Bacteria 6550
119 Ga0466963_0046844 3300044694 Bacteria 2852
120 Ga0466971_0009301 3300044719 Bacteria 4292
121 Ga0466971_0011199 3300044719 Bacteria 3929
122 Ga0466968_0019594 3300044735 Bacteria 2724
123 Ga0466970_0016543 3300044765 Bacteria 3806
124 Ga0466957_0000401 3300044842 Bacteria 21131
125 Ga0466957_0000561 3300044842 Bacteria 18771
126 Ga0466960_0003980 3300044901 Bacteria 5741
127 Ga0466959_0004445 3300045049 Bacteria 9386
128 Ga0466958_0000007 3300045836 Bacteria 61704
129 Ga0466967_0008102 3300045976 Bacteria 7664
130 Ga0466967_0009253 3300045976 Bacteria 7296
131 Ga0466967_0020034 3300045976 Bacteria 5395
132 Ga0495592_0000703 3300046454 Bacteria 23394
133 Ga0495592_0001011 3300046454 Bacteria 19498
134 Ga0495592_0021525 3300046454 Bacteria 4905
135 Ga0495629_0005312 3300046459 Bacteria 9630
136 Ga0495629_0006141 3300046459 Bacteria 8923
137 Ga0495638_0000794 3300046460 Bacteria 33330
138 Ga0495641_0004455 3300046461 Bacteria 9891
139 Ga0495641_0011194 3300046461 Bacteria 5133
140 Ga0495651_0000873 3300046462 Bacteria 23394
141 Ga0495651_0005819 3300046462 Bacteria 9409
142 Ga0495651_0024561 3300046462 Bacteria 4687
143 Ga0495653_0001119 3300046463 Bacteria 20624
144 Ga0495653_0037702 3300046463 Bacteria 3796
145 Ga0495580_0050104 3300046472 Bacteria 2953
146 Ga0495582_0002893 3300046473 Bacteria 9596
147 Ga0495639_0000537 3300046475 Bacteria 17772
148 Ga0495662_0000434 3300046476 Bacteria 18754
149 Ga0495608_0000599 3300046511 Bacteria 24772
150 Ga0495608_0062011 3300046511 Bacteria 2457
151 Ga0495628_0001450 3300046516 Bacteria 21746
152 Ga0495628_0007206 3300046516 Bacteria 9630
153 Ga0495628_0031110 3300046516 Bacteria 4317
154 Ga0495630_0000547 3300046517 Bacteria 27532
155 Ga0495630_0040328 3300046517 Bacteria 3489
156 Ga0495630_0064891 3300046517 Bacteria 2743
157 Ga0495666_0006828 3300046526 Bacteria 5730
158 Ga0495666_0007319 3300046526 Bacteria 5535
159 Ga0495652_0001250 3300046529 Bacteria 28428
160 Ga0495665_0002006 3300046531 Bacteria 11010
161 Ga0495665_0025871 3300046531 Bacteria 3151
162 Ga0495640_0012989 3300046533 Bacteria 6345
163 Ga0495587_0000647 3300046536 Bacteria 23376
164 Ga0495587_0001871 3300046536 Bacteria 14004
165 Ga0495645_0028208 3300046543 Bacteria 4078
166 Ga0495667_0000578 3300046559 Bacteria 23366
167 Ga0495667_0002415 3300046559 Bacteria 12473
168 Ga0495667_0005376 3300046559 Bacteria 8658
169 Ga0495667_0007984 3300046559 Bacteria 7178
170 Ga0495634_0041323 3300046642 Bacteria 3132
171 Ga0495635_0013799 3300046663 Bacteria 5651
172 Ga0495588_0000690 3300046674 Bacteria 15549
173 Ga0495657_0001127 3300046675 Bacteria 23394
174 Ga0495657_0009413 3300046675 Bacteria 7402
175 Ga0495599_0000454 3300046678 Bacteria 23336
176 Ga0495599_0015072 3300046678 Bacteria 4792
177 Ga0495623_0001840 3300046679 Bacteria 14229
178 Ga0495646_0007720 3300046680 Bacteria 6836
179 Ga0495646_0018352 3300046680 Bacteria 4431
180 Ga0495646_0032936 3300046680 Bacteria 3222
181 Ga0495647_0006145 3300046681 Bacteria 3962
182 Ga0495658_0001112 3300046683 Bacteria 14234
183 Ga0495613_0010709 3300046689 Bacteria 6800
184 Ga0495613_0014072 3300046689 Bacteria 5937
185 Ga0495613_0017675 3300046689 Bacteria 5312
186 Ga0495600_0019508 3300046809 Bacteria 4330
187 Ga0495600_0032921 3300046809 Bacteria 3363
188 Ga0495600_0068647 3300046809 Bacteria 2316
189 Ga0495581_0013963 3300047315 Bacteria 4658
190 Ga0495604_0000479 3300047317 Bacteria 35157
191 Ga0495604_0001013 3300047317 Bacteria 23394
192 Ga0495674_0004944 3300047319 Bacteria 12816
193 Ga0495674_0019205 3300047319 Bacteria 6349
194 Ga0495672_0010536 3300047320 Bacteria 6578
195 Ga0495680_0001700 3300047322 Bacteria 23371
196 Ga0495680_0009253 3300047322 Bacteria 8875
197 Ga0495680_0034907 3300047322 Bacteria 4056
198 Ga0495680_0036725 3300047322 Bacteria 3930
199 Ga0495675_0007687 3300047444 Bacteria 6649
200 Ga0495675_0009909 3300047444 Bacteria 5939
201 Ga0495684_0073327 3300047471 Bacteria 2600
202 Ga0495593_0001068 3300047673 Bacteria 15992
203 Ga0495593_0005297 3300047673 Bacteria 7619
204 Ga0495602_0001471 3300048088 Bacteria 23397
205 Ga0495602_0021344 3300048088 Bacteria 6377
206 Ga0495614_0000806 3300048089 Bacteria 13260
207 Ga0496100_0019557 3300048903 Bacteria 4043
208 Ga0496101_0003388 3300048904 Bacteria 9942
209 Ga0496102_0006112 3300048905 Bacteria 10262
210 Ga0496107_0001048 3300048910 Bacteria 16541
211 Ga0496107_0054499 3300048910 Bacteria 2886
212 Ga0496108_0000779 3300048911 Bacteria 24860
213 Ga0496108_0035777 3300048911 Bacteria 4129
214 Ga0496109_0005872 3300048912 Bacteria 10295
215 Ga0496109_0017111 3300048912 Bacteria 6346
216 Ga0496109_0029273 3300048912 Bacteria 4932
217 Ga0496110_0000218 3300048913 Bacteria 37078
218 Ga0496111_0001675 3300048914 Bacteria 12901
219 Ga0496112_0147397 3300048915 Bacteria 2322
220 Ga0496115_0004473 3300048918 Bacteria 10120
221 Ga0496115_0006210 3300048918 Bacteria 8738
222 Ga0496115_0027052 3300048918 Bacteria 4483
223 Ga0496117_0000428 3300048920 Bacteria 70517
224 Ga0496118_0002945 3300048921 Bacteria 22119
225 Ga0496126_0000306 3300048929 Bacteria 104116
226 Ga0496126_0024733 3300048929 Bacteria 5793
227 Ga0501031_0033486 3300049568 Bacteria 3352
228 Ga0501033_0069664 3300049570 Bacteria 2585
229 Ga0501036_0006541 3300049572 Bacteria 9467
230 Ga0501037_0013510 3300049573 Bacteria 6013
231 Ga0501037_0077982 3300049573 Bacteria 2404
232 Ga0501038_0017481 3300049574 Bacteria 6483
233 Ga0501039_0010384 3300049575 Bacteria 7102
234 Ga0501041_0002513 3300049577 Bacteria 10444
235 Ga0501042_0001668 3300049578 Bacteria 13228
236 Ga0501042_0004681 3300049578 Bacteria 8729
237 Ga0501046_0009743 3300049580 Bacteria 8284
238 Ga0501046_0013456 3300049580 Bacteria 6926
239 Ga0501047_0000054 3300049581 Bacteria 149749
240 Ga0501067_0000010 3300049583 Bacteria 123277
241 Ga0501068_0000660 3300049584 Bacteria 17736
242 Ga0501068_0029534 3300049584 Bacteria 3247
243 Ga0501069_0000658 3300049585 Bacteria 16066
244 Ga0501071_0000894 3300049587 Bacteria 16118
245 Ga0501071_0006516 3300049587 Bacteria 7579
246 Ga0501072_0070499 3300049588 Bacteria 2761
247 Ga0501074_0012585 3300049590 Bacteria 6150
248 Ga0501075_0002658 3300049591 Bacteria 11943
249 Ga0501076_0001210 3300049592 Bacteria 17155
250 Ga0501079_0026315 3300049741 Bacteria 4461
251 Ga0501081_0002909 3300049743 Bacteria 10868
252 Ga0501081_0008963 3300049743 Bacteria 6503
253 Ga0501081_0021750 3300049743 Bacteria 4283
254 Ga0501083_0020517 3300049744 Bacteria 4597
255 Ga0501083_0097985 3300049744 Bacteria 1934
256 Ga0501035_0046973 3300049822 Bacteria 3879
257 Ga0501035_0055853 3300049822 Bacteria 3525
258 nmdc:mga08y16_45_c1 3300050511 Bacteria 117996
259 nmdc:mga0n895_31099_c1 3300050512 Bacteria 5108
260 nmdc:mga0n895_3400_c1 3300050512 Bacteria 12817
261 nmdc:mga0rr50_1379_c1 3300050513 Bacteria 13303
262 nmdc:mga0rr50_5229_c1 3300050513 Bacteria 7722
263 Ga0495601_0009686 3300053077 Bacteria 5701
264 Ga0495595_0001443 3300053084 Bacteria 9264
265 Ga0495595_0019138 3300053084 Bacteria 2968
266 Ga0495619_0005501 3300053085 Bacteria 8036
267 Ga0495619_0011161 3300053085 Bacteria 5651
268 Ga0500559_0007187 3300053136 Bacteria 4958
269 Ga0500568_0000485 3300053139 Bacteria 29364
270 Ga0500604_0000187 3300053151 Bacteria 17606
271 Ga0500616_0000327 3300053153 Bacteria 68241
272 Ga0500616_0000877 3300053153 Bacteria 33135
273 Ga0501084_0007942 3300054114 Bacteria 8737
274 Ga0501082_0031018 3300060353 Bacteria 4607
275 Ga0466962_0008232 3300061719 Bacteria 4999
276 2995467341 2995463766 Bacteria 8577691
277 2515720437 2515154129 Bacteria 5584369
278 2516084512 2515154202 Bacteria 5471270
279 2616902544 2616644941 Bacteria 8510691
280 2857455024 2857453340 Bacteria 8090534
281 2858870516 2858868258 Bacteria 7683772
282 2862580393 2862574272 Bacteria 10567477
283 2867314336 2867312974 Bacteria 7058875
284 2867321640 2867319477 Bacteria 7069771
285 2873157892 2873151551 Bacteria 8625867
286 2895434650 2895427314 Bacteria 13147766
287 2895434820 2895427314 Bacteria 13147766
288 2971416130 2971410472 Bacteria 8311090
289 8056539004 8056533031 Bacteria 8964429
290 Ga0070683_100000095
291 Ga0070683_100048585
292 Ga0070680_100013179
293 Ga0070674_100001827
294 Ga0070659_100022373
295 Ga0070714_100001399
296 Ga0070714_100025282
297 Ga0070713_100015780
298 Ga0070711_100002703
299 Ga0070708_100007237
300 Ga0070707_100031462
301 Ga0070698_100000013
302 Ga0070698_100000532
303 Ga0070699_100001722
304 Ga0070684_100000240
305 Ga0070697_100007669
306 Ga0070704_100031119
307 Ga0068855_100021677
308 Ga0068857_100038922
309 Ga0068856_100010726
310 Ga0068856_100046879
311 Ga0068859_100069356
312 Ga0068866_10043336
313 Ga0081455_10012788
314 Ga0070716_100022275
315 Ga0097620_100069355
316 Ga0075435_100006386
317 Ga0075435_100011505
318 Ga0105240_10066633
319 Ga0105240_10084008
320 Ga0111539_10000133
321 Ga0105245_10000721
322 Ga0105245_10004457
323 Ga0114129_10084523
324 Ga0114129_10090858
325 Ga0105238_10019244
326 Ga0105238_10061625
327 Ga0105239_10045678
328 Ga0105239_10121260
329 Ga0105246_10018024
330 Ga0157369_10017501
331 Ga0157380_10003651
332 Ga0182008_10024029
333 Ga0157377_10014174
334 Ga0197907_10641766
335 Ga0206354_11128276
336 Ga0213874_10001361
337 Ga0213875_10000060
338 Ga0224712_10001557
339 Ga0224712_10003620
340 Ga0207692_10001218
341 Ga0207695_10009164
342 Ga0207663_10015298
343 Ga0207657_10102103
344 Ga0207652_10008203
345 Ga0207646_10005504
346 Ga0207694_10000242
347 Ga0207687_10000467
348 Ga0207687_10054974
349 Ga0207700_10004894
350 Ga0207700_10006095
351 Ga0207664_10002007
352 Ga0207664_10016506
353 Ga0207664_10060303
354 Ga0207664_10073202
355 Ga0207665_10015803
356 Ga0207665_10051649
357 Ga0207661_10006314
358 Ga0207661_10023028
359 Ga0207674_10035247
360 Ga0207683_10010514
361 Ga0207683_10045942
362 Ga0207428_10000040
363 Ga0268264_10111640
364 Ga0265319_1000844
365 Ga0265340_10000440
366 Ga0307513_10037064
367 Ga0307508_10000366
368 Ga0307413_10000674
369 Ga0307410_10005164
370 Ga0307407_10006186
371 Ga0307416_100080559
372 Ga0307414_10043944
373 Ga0373934_0000256
374 Ga0373944_0005654
375 Ga0373945_0001204
376 Ga0373953_0015596
377 Ga0373954_0023122
378 Ga0373957_0000448
379 Ga0373943_0003816
380 Ga0373955_0001516
381 Ga0373955_0024003
382 Ga0373924_0001332
383 Ga0373935_0009729
384 Ga0373933_0000548
385 Ga0373937_0001445
386 Ga0372808_000186
387 Ga0373925_0000824
388 Ga0373925_0015253
389 Ga0436364_0022317
390 Ga0436364_0222985
391 Ga0436364_0884952
392 Ga0436364_1009484
393 Ga0436364_1273639
394 Ga0436364_1481155
395 Ga0400483_118448
396 Ga0436365_1104401
397 Ga0436365_1264951
398 Ga0436365_1399953
399 Ga0436363_0700452
400 Ga0436363_0739703
401 Ga0466965_0005110
402 Ga0466966_0000795
403 Ga0466966_0009583
404 Ga0466963_0000087
405 Ga0466963_0000841
406 Ga0466963_0001581
407 Ga0466963_0007381
408 Ga0466963_0046844
409 Ga0466971_0009301
410 Ga0466971_0011199
411 Ga0466968_0019594
412 Ga0466970_0016543
413 Ga0466957_0000401
414 Ga0466957_0000561
415 Ga0466960_0003980
416 Ga0466959_0004445
417 Ga0466958_0000007
418 Ga0466967_0008102
419 Ga0466967_0009253
420 Ga0466967_0020034
421 Ga0495592_0000703
422 Ga0495592_0001011
423 Ga0495592_0021525
424 Ga0495629_0005312
425 Ga0495629_0006141
426 Ga0495638_0000794
427 Ga0495641_0004455
428 Ga0495641_0011194
429 Ga0495651_0000873
430 Ga0495651_0005819
431 Ga0495651_0024561
432 Ga0495653_0001119
433 Ga0495653_0037702
434 Ga0495580_0050104
435 Ga0495582_0002893
436 Ga0495639_0000537
437 Ga0495662_0000434
438 Ga0495608_0000599
439 Ga0495608_0062011
440 Ga0495628_0001450
441 Ga0495628_0007206
442 Ga0495628_0031110
443 Ga0495630_0000547
444 Ga0495630_0040328
445 Ga0495630_0064891
446 Ga0495666_0006828
447 Ga0495666_0007319
448 Ga0495652_0001250
449 Ga0495665_0002006
450 Ga0495665_0025871
451 Ga0495640_0012989
452 Ga0495587_0000647
453 Ga0495587_0001871
454 Ga0495645_0028208
455 Ga0495667_0000578
456 Ga0495667_0002415
457 Ga0495667_0005376
458 Ga0495667_0007984
459 Ga0495634_0041323
460 Ga0495635_0013799
461 Ga0495588_0000690
462 Ga0495657_0001127
463 Ga0495657_0009413
464 Ga0495599_0000454
465 Ga0495599_0015072
466 Ga0495623_0001840
467 Ga0495646_0007720
468 Ga0495646_0018352
469 Ga0495646_0032936
470 Ga0495647_0006145
471 Ga0495658_0001112
472 Ga0495613_0010709
473 Ga0495613_0014072
474 Ga0495613_0017675
475 Ga0495600_0019508
476 Ga0495600_0032921
477 Ga0495600_0068647
478 Ga0495581_0013963
479 Ga0495604_0000479
480 Ga0495604_0001013
481 Ga0495674_0004944
482 Ga0495674_0019205
483 Ga0495672_0010536
484 Ga0495680_0001700
485 Ga0495680_0009253
486 Ga0495680_0034907
487 Ga0495680_0036725
488 Ga0495675_0007687
489 Ga0495675_0009909
490 Ga0495684_0073327
491 Ga0495593_0001068
492 Ga0495593_0005297
493 Ga0495602_0001471
494 Ga0495602_0021344
495 Ga0495614_0000806
496 Ga0496100_0019557
497 Ga0496101_0003388
498 Ga0496102_0006112
499 Ga0496107_0001048
500 Ga0496107_0054499
501 Ga0496108_0000779
502 Ga0496108_0035777
503 Ga0496109_0005872
504 Ga0496109_0017111
505 Ga0496109_0029273
506 Ga0496110_0000218
507 Ga0496111_0001675
508 Ga0496112_0147397
509 Ga0496115_0004473
510 Ga0496115_0006210
511 Ga0496115_0027052
512 Ga0496117_0000428
513 Ga0496118_0002945
514 Ga0496126_0000306
515 Ga0496126_0024733
516 Ga0501031_0033486
517 Ga0501033_0069664
518 Ga0501036_0006541
519 Ga0501037_0013510
520 Ga0501037_0077982
521 Ga0501038_0017481
522 Ga0501039_0010384
523 Ga0501041_0002513
524 Ga0501042_0001668
525 Ga0501042_0004681
526 Ga0501046_0009743
527 Ga0501046_0013456
528 Ga0501047_0000054
529 Ga0501067_0000010
530 Ga0501068_0000660
531 Ga0501068_0029534
532 Ga0501069_0000658
533 Ga0501071_0000894
534 Ga0501071_0006516
535 Ga0501072_0070499
536 Ga0501074_0012585
537 Ga0501075_0002658
538 Ga0501076_0001210
539 Ga0501079_0026315
540 Ga0501081_0002909
541 Ga0501081_0008963
542 Ga0501081_0021750
543 Ga0501083_0020517
544 Ga0501083_0097985
545 Ga0501035_0046973
546 Ga0501035_0055853
547 nmdc:mga08y16_45_c1
548 nmdc:mga0n895_31099_c1
549 nmdc:mga0n895_3400_c1
550 nmdc:mga0rr50_1379_c1
551 nmdc:mga0rr50_5229_c1
552 Ga0495601_0009686
553 Ga0495595_0001443
554 Ga0495595_0019138
555 Ga0495619_0005501
556 Ga0495619_0011161
557 Ga0500559_0007187
558 Ga0500568_0000485
559 Ga0500604_0000187
560 Ga0500616_0000327
561 Ga0500616_0000877
562 Ga0501084_0007942
563 Ga0501082_0031018
564 Ga0466962_0008232
565 2995467341
566 2515720437
567 2516084512
568 2616902544
569 2857455024
570 2858870516
571 2862580393
572 2867314336
573 2867321640
574 2873157892
575 2895434650
576 2895434820
577 2971416130
578 8056539004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

231

296

0.99

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

699

766

0.96

PF00005

ABC_tran

ABC transporter

20

180

0.94

PF00005

ABC_tran

ABC transporter

496

648

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9329 12 260
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9316 10 260
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9298 11 242
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9293 11 260
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9282 10 260
ID Description Score Start End Superfamily
af_P33916_3_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9782 10 260 3.40.50.300
af_P75796_10_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9679 11 268 3.40.50.300
af_I6Y482_6_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9675 11 260 3.40.50.300
af_P33593_4_250_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9583 13 260 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9579 11 329 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3M1KQ01-F1-model_v4 ABC-type dipeptide transporter (EC 7.4.2.9) 0.9695 11 178 GO:0005524
GO:0016887
AF-A0A7W1WKK1-F1-model_v4 ABC transporter ATP-binding protein 0.9681 11 325 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A2N4YTA9-F1-model_v4 Glutathione ABC transporter ATP-binding protein 0.9656 11 118 GO:0005524
GO:0016887
AF-A0A3D1U6S0-F1-model_v4 deleted 0.9646 10 126
AF-A0A5R2N7B1-F1-model_v4 ATP-binding cassette domain-containing protein 0.964 381 560 GO:0005524
GO:0016887
GO:0055085

Map