F389442

General Info

Members Datasets Scaffolds Average Seq Length
289 173 578 155

Family's Representative Sequence

Representative Sequence 3300049741|Ga0501079_0298340|Ga0501079_0298340_79_549
Length 156
Sequence VKQETIVDESYGHTLNRIETAIARESDPGRAMELTVRILQEDLPDYAWVGIYLLFGNELVLGPFVGKPSPHTRIPLGRGICGAATIIVDDVNADPRYLACSLDTRSEIVVPIMQEGDVLGEIDVDSDRTAAFDDRDRELLERVAAHLAPRLAAIPR

Samples

Sample ID Description Type Environment
1 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
96 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
97 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
98 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
99 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
100 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
101 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
102 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
103 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
104 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
105 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
106 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
129 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
146 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
147 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
170 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
171 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9
Nodule 0
Rhizoplane 6.92
Rhizosphere 83.74
Stem 0
Stem Tuber 0
Unclassified 10.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501079_0298340 3300049741 Bacteria 1261
2 JGI24034J26672_10017801 3300002239 Bacteria 1101
3 Ga0065712_10082399 3300005290 Bacteria 2920
4 Ga0065715_10508279 3300005293 Unclassified 774
5 Ga0070683_100960690 3300005329 Bacteria 820
6 Ga0070690_101525802 3300005330 Bacteria 540
7 Ga0070670_100319228 3300005331 Unclassified 1361
8 Ga0070670_100597715 3300005331 Bacteria 987
9 Ga0070670_100718649 3300005331 Bacteria 899
10 Ga0070677_10730852 3300005333 Unclassified 560
11 Ga0068868_100066849 3300005338 Bacteria 2859
12 Ga0070668_100357657 3300005347 Bacteria 1237
13 Ga0070669_101182448 3300005353 Bacteria 660
14 Ga0070675_101575371 3300005354 Unclassified 606
15 Ga0070671_100178525 3300005355 Bacteria 1797
16 Ga0070674_100009471 3300005356 Bacteria 5830
17 Ga0070673_100200527 3300005364 Bacteria 1718
18 Ga0070667_100437375 3300005367 Bacteria 1194
19 Ga0070667_100858587 3300005367 Unclassified 844
20 Ga0070713_100420877 3300005436 Bacteria 1250
21 Ga0070700_100115919 3300005441 Bacteria 1788
22 Ga0070678_100078289 3300005456 Bacteria 2497
23 Ga0070685_10131197 3300005466 Bacteria 1567
24 Ga0070684_100282063 3300005535 Bacteria 1522
25 Ga0070672_101270502 3300005543 Unclassified 657
26 Ga0070686_100589923 3300005544 Bacteria 874
27 Ga0070665_100059897 3300005548 Bacteria 3816
28 Ga0070665_101677213 3300005548 Bacteria 643
29 Ga0068852_100232429 3300005616 Bacteria 1758
30 Ga0068859_100930697 3300005617 Unclassified 953
31 Ga0068870_10919877 3300005840 Unclassified 619
32 Ga0068860_100942869 3300005843 Bacteria 880
33 Ga0068860_102214962 3300005843 Bacteria 570
34 Ga0068862_100784562 3300005844 Bacteria 929
35 Ga0075365_10005758 3300006038 Bacteria 6727
36 Ga0075365_10021281 3300006038 Bacteria 4043
37 Ga0075368_10050168 3300006042 Bacteria 1657
38 Ga0075363_100105617 3300006048 Bacteria 1562
39 Ga0075364_10002611 3300006051 Bacteria 10113
40 Ga0075364_10037796 3300006051 Bacteria 3128
41 Ga0075364_10202151 3300006051 Bacteria 1347
42 Ga0075362_10002386 3300006177 Bacteria 6290
43 Ga0075367_10021586 3300006178 Bacteria 3600
44 Ga0075367_10023807 3300006178 Bacteria 3449
45 Ga0075366_10170688 3300006195 Bacteria 1319
46 Ga0075366_10246839 3300006195 Bacteria 1089
47 Ga0075370_10287586 3300006353 Bacteria 977
48 Ga0075428_100000338 3300006844 Bacteria 46466
49 Ga0075428_100053606 3300006844 Bacteria 4419
50 Ga0075430_100000794 3300006846 Bacteria 24497
51 Ga0075430_100014780 3300006846 Bacteria 6648
52 Ga0075430_100018975 3300006846 Bacteria 5851
53 Ga0075430_100036163 3300006846 Bacteria 4187
54 Ga0075430_100426792 3300006846 Bacteria 1094
55 Ga0075431_100013194 3300006847 Bacteria 8346
56 Ga0075431_100025304 3300006847 Bacteria 6085
57 Ga0075431_100089558 3300006847 Bacteria 3176
58 Ga0075431_100245271 3300006847 Bacteria 1821
59 Ga0075433_10001777 3300006852 Bacteria 16153
60 Ga0075434_100009573 3300006871 Bacteria 9046
61 Ga0075429_100012519 3300006880 Bacteria 7360
62 Ga0075429_100119104 3300006880 Bacteria 2307
63 Ga0068865_100206008 3300006881 Bacteria 1530
64 Ga0097620_100930778 3300006931 Unclassified 953
65 Ga0075435_100145605 3300007076 Unclassified 1990
66 Ga0111539_10001433 3300009094 Bacteria 31824
67 Ga0111539_10001692 3300009094 Bacteria 29428
68 Ga0111539_10137581 3300009094 Bacteria 2860
69 Ga0114129_10001635 3300009147 Bacteria 30431
70 Ga0114129_10020639 3300009147 Bacteria 9367
71 Ga0114129_10024235 3300009147 Bacteria 8599
72 Ga0114129_10143570 3300009147 Bacteria 3271
73 Ga0114129_10843756 3300009147 Bacteria 1165
74 Ga0105242_10659340 3300009176 Unclassified 1019
75 Ga0105248_10942961 3300009177 Unclassified 975
76 Ga0105246_10299693 3300011119 Bacteria 1297
77 Ga0157374_10501468 3300013296 Bacteria 1218
78 Ga0157378_10481252 3300013297 Bacteria 1237
79 Ga0163163_10000071 3300014325 Bacteria 112778
80 Ga0157379_10485225 3300014968 Bacteria 1144
81 Ga0157379_10674370 3300014968 Bacteria 969
82 Ga0157376_10335845 3300014969 Bacteria 1441
83 Ga0157376_10883147 3300014969 Bacteria 911
84 Ga0207697_10000485 3300025315 Bacteria 22453
85 Ga0207688_10002387 3300025901 Bacteria 10110
86 Ga0207705_11173566 3300025909 Bacteria 590
87 Ga0207650_10528210 3300025925 Bacteria 988
88 Ga0207644_10131831 3300025931 Bacteria 1914
89 Ga0207706_10303076 3300025933 Bacteria 1392
90 Ga0207686_10917854 3300025934 Bacteria 707
91 Ga0207670_10458372 3300025936 Bacteria 1029
92 Ga0207669_10802589 3300025937 Unclassified 781
93 Ga0207669_11240822 3300025937 Bacteria 632
94 Ga0207711_10602495 3300025941 Bacteria 1025
95 Ga0207651_10147275 3300025960 Bacteria 1828
96 Ga0207651_10479704 3300025960 Bacteria 1072
97 Ga0207668_10088073 3300025972 Bacteria 2273
98 Ga0207668_10692546 3300025972 Bacteria 895
99 Ga0207658_10343968 3300025986 Bacteria 1297
100 Ga0207677_10614424 3300026023 Bacteria 955
101 Ga0207708_10110111 3300026075 Bacteria 2137
102 Ga0207708_10447319 3300026075 Unclassified 1075
103 Ga0207683_10138771 3300026121 Bacteria 2189
104 Ga0209971_1044231 3300027682 Unclassified 1073
105 Ga0209813_10084153 3300027866 Bacteria 1057
106 Ga0207428_10001054 3300027907 Bacteria 30266
107 Ga0207428_10003762 3300027907 Bacteria 14568
108 Ga0207428_10424917 3300027907 Bacteria 971
109 Ga0268264_11060953 3300028381 Bacteria 818
110 Ga0316182_1280193 3300030745 Unclassified 1296
111 Ga0307408_100058733 3300031548 Bacteria 2798
112 Ga0307408_100078269 3300031548 Bacteria 2464
113 Ga0307408_100168332 3300031548 Bacteria 1747
114 Ga0307408_100510207 3300031548 Bacteria 1054
115 Ga0307405_10672163 3300031731 Bacteria 854
116 Ga0307405_11544755 3300031731 Bacteria 584
117 Ga0307413_10444772 3300031824 Bacteria 1027
118 Ga0307410_10339984 3300031852 Bacteria 1196
119 Ga0307406_10180222 3300031901 Bacteria 1537
120 Ga0307407_10010621 3300031903 Bacteria 4351
121 Ga0307412_10097944 3300031911 Bacteria 2067
122 Ga0307412_10277635 3300031911 Unclassified 1314
123 Ga0307412_10291203 3300031911 Bacteria 1286
124 Ga0307412_10477510 3300031911 Bacteria 1033
125 Ga0307412_11581214 3300031911 Bacteria 598
126 Ga0307412_12049925 3300031911 Bacteria 530
127 Ga0307409_100020881 3300031995 Bacteria 4476
128 Ga0307416_100033504 3300032002 Bacteria 3895
129 Ga0307416_100089334 3300032002 Bacteria 2637
130 Ga0307416_100214033 3300032002 Bacteria 1841
131 Ga0307416_100279329 3300032002 Bacteria 1645
132 Ga0307416_100296495 3300032002 Bacteria 1604
133 Ga0307416_100524394 3300032002 Bacteria 1253
134 Ga0307416_100689979 3300032002 Bacteria 1109
135 Ga0307414_11429907 3300032004 Bacteria 643
136 Ga0307411_10061693 3300032005 Bacteria 2497
137 Ga0307411_10281206 3300032005 Bacteria 1324
138 Ga0307411_10543528 3300032005 Bacteria 990
139 Ga0307415_101175245 3300032126 Bacteria 722
140 Ga0307415_101637217 3300032126 Unclassified 619
141 Ga0373923_0194676 3300035111 Bacteria 935
142 Ga0373933_0219582 3300035724 Bacteria 1219
143 Ga0373937_0010272 3300036401 Bacteria 8171
144 Ga0395905_0196761 3300037471 Bacteria 1890
145 Ga0436365_1130532 3300039437 Bacteria 1714
146 Ga0439436_0077165 3300041404 Bacteria 928
147 Ga0451797_1476807 3300041453 Unclassified 572
148 Ga0439431_0152221 3300041997 Bacteria 658
149 Ga0439441_034065 3300042001 Bacteria 999
150 Ga0439442_016989 3300042002 Bacteria 1501
151 Ga0439450_002117 3300042008 Bacteria 3057
152 Ga0439457_009492 3300042014 Bacteria 2263
153 Ga0439462_0020813 3300042015 Bacteria 1712
154 Ga0439446_0011458 3300042156 Bacteria 2407
155 Ga0439446_0114031 3300042156 Bacteria 865
156 Ga0439435_0010798 3300042436 Bacteria 2177
157 Ga0439435_0014210 3300042436 Bacteria 1965
158 Ga0439435_0039423 3300042436 Bacteria 1316
159 Ga0439435_0145895 3300042436 Bacteria 756
160 Ga0439444_0006105 3300042437 Bacteria 1810
161 Ga0439464_0000253 3300042439 Bacteria 9897
162 Ga0451576_0095414 3300045051 Bacteria 3093
163 Ga0495603_0129813 3300046455 Bacteria 1468
164 Ga0495608_0177885 3300046511 Bacteria 1347
165 Ga0495667_0631501 3300046559 Bacteria 666
166 Ga0495646_0293673 3300046680 Bacteria 861
167 Ga0495600_0190430 3300046809 Bacteria 1319
168 Ga0495674_0261433 3300047319 Bacteria 1422
169 Ga0495680_0164768 3300047322 Bacteria 1608
170 Ga0495602_0353849 3300048088 Bacteria 1059
171 Ga0496101_0211469 3300048904 Unclassified 1503
172 Ga0496102_0007276 3300048905 Bacteria 9448
173 Ga0496104_0671152 3300048907 Bacteria 945
174 Ga0496105_0502206 3300048908 Bacteria 952
175 Ga0496105_1030155 3300048908 Bacteria 614
176 Ga0496106_0086949 3300048909 Bacteria 2408
177 Ga0496106_0313411 3300048909 Bacteria 1259
178 Ga0496106_0822415 3300048909 Unclassified 736
179 Ga0496107_0881308 3300048910 Unclassified 653
180 Ga0496108_0055662 3300048911 Bacteria 3322
181 Ga0496108_0638711 3300048911 Bacteria 926
182 Ga0496109_0096215 3300048912 Bacteria 2743
183 Ga0496110_0035113 3300048913 Bacteria 4348
184 Ga0496110_1308416 3300048913 Bacteria 634
185 Ga0496110_1528636 3300048913 Bacteria 577
186 Ga0496111_0107520 3300048914 Bacteria 2054
187 Ga0496112_0004474 3300048915 Bacteria 11855
188 Ga0496112_0026777 3300048915 Bacteria 5555
189 Ga0496114_0259519 3300048917 Bacteria 1530
190 Ga0501298_019385 3300049521 Bacteria 1260
191 Ga0501299_005223 3300049522 Bacteria 1985
192 Ga0501031_0150112 3300049568 Bacteria 1523
193 Ga0501032_0178090 3300049569 Unclassified 1393
194 Ga0501033_0803407 3300049570 Bacteria 636
195 Ga0501039_0265672 3300049575 Bacteria 1349
196 Ga0501040_0010140 3300049576 Bacteria 6159
197 Ga0501041_0890839 3300049577 Bacteria 572
198 Ga0501042_0027789 3300049578 Bacteria 3980
199 Ga0501043_0299636 3300049579 Bacteria 1229
200 Ga0501043_0950521 3300049579 Bacteria 614
201 Ga0501046_0194956 3300049580 Bacteria 1510
202 Ga0501071_0026247 3300049587 Bacteria 4087
203 Ga0501071_0452735 3300049587 Bacteria 982
204 Ga0501072_0223369 3300049588 Unclassified 1501
205 Ga0501072_0257966 3300049588 Unclassified 1388
206 Ga0501072_0608100 3300049588 Bacteria 862
207 Ga0501072_0675448 3300049588 Bacteria 812
208 Ga0501072_1289112 3300049588 Bacteria 566
209 Ga0501074_0063644 3300049590 Bacteria 2657
210 Ga0501074_0212911 3300049590 Bacteria 1376
211 Ga0501074_0259804 3300049590 Bacteria 1235
212 Ga0501074_0263441 3300049590 Bacteria 1225
213 Ga0501075_0102560 3300049591 Bacteria 2173
214 Ga0501075_0248729 3300049591 Bacteria 1355
215 Ga0501075_0386446 3300049591 Bacteria 1067
216 Ga0501075_0537143 3300049591 Bacteria 892
217 Ga0501076_0023905 3300049592 Unclassified 4715
218 Ga0501076_0122901 3300049592 Bacteria 2102
219 Ga0501076_0186020 3300049592 Bacteria 1694
220 Ga0501077_0019491 3300049593 Bacteria 4291
221 Ga0501077_0048623 3300049593 Bacteria 2695
222 Ga0501077_0201254 3300049593 Bacteria 1265
223 Ga0501208_020735 3300049655 Bacteria 1072
224 Ga0501233_019885 3300049668 Bacteria 1428
225 Ga0501235_033225 3300049669 Bacteria 1168
226 Ga0501079_0866992 3300049741 Bacteria 711
227 Ga0501080_0106523 3300049742 Bacteria 2598
228 Ga0501080_0500411 3300049742 Bacteria 1086
229 Ga0501080_0501051 3300049742 Bacteria 1085
230 Ga0501081_0103526 3300049743 Bacteria 2014
231 Ga0501081_0210586 3300049743 Bacteria 1412
232 Ga0501081_0484941 3300049743 Bacteria 920
233 Ga0501083_0885688 3300049744 Bacteria 581
234 Ga0501035_0630409 3300049822 Bacteria 871
235 Ga0501045_0007005 3300049824 Bacteria 7819
236 Ga0501045_0073210 3300049824 Bacteria 2523
237 Ga0501045_0162326 3300049824 Bacteria 1664
238 Ga0501045_0404884 3300049824 Bacteria 1015
239 Ga0501045_0459511 3300049824 Bacteria 946
240 nmdc:mga03683_62958_c1 3300050489 Bacteria 1572
241 nmdc:mga00v17_241150_c1 3300050491 Unclassified 1172
242 nmdc:mga00v17_4855_c1 3300050491 Bacteria 7047
243 nmdc:mga00v17_64916_c1 3300050491 Bacteria 2251
244 nmdc:mga00v17_979_c1 3300050491 Bacteria 15302
245 nmdc:mga0yw44_123899_c1 3300050492 Bacteria 1667
246 nmdc:mga0yw44_159662_c1 3300050492 Bacteria 1475
247 nmdc:mga0yw44_31975_c1 3300050492 Bacteria 3064
248 nmdc:mga0k408_2615_c1 3300050493 Bacteria 9566
249 nmdc:mga0k408_4884_c1 3300050493 Bacteria 7109
250 nmdc:mga06z11_25859_c1 3300050494 Bacteria 2787
251 nmdc:mga06z11_56993_c1 3300050494 Bacteria 2023
252 nmdc:mga05p37_33321_c1 3300050507 Bacteria 6309
253 nmdc:mga05p37_3461_c1 3300050507 Bacteria 18434
254 nmdc:mga05p37_525395_c1 3300050507 Unclassified 1353
255 nmdc:mga05p37_52912_c2 3300050507 Bacteria 4236
256 nmdc:mga09592_122829_c1 3300050508 Bacteria 2231
257 nmdc:mga09592_55942_c1 3300050508 Bacteria 3334
258 nmdc:mga09592_78418_c1 3300050508 Bacteria 2811
259 nmdc:mga0qj67_17803_c1 3300050509 Bacteria 5405
260 nmdc:mga0qj67_33498_c1 3300050509 Bacteria 4008
261 nmdc:mga0qj67_4712_c1 3300050509 Bacteria 9909
262 nmdc:mga06r32_11651_c1 3300050510 Bacteria 7915
263 nmdc:mga06r32_141005_c1 3300050510 Bacteria 2386
264 nmdc:mga06r32_16920_c1 3300050510 Bacteria 6653
265 nmdc:mga06r32_30108_c1 3300050510 Bacteria 5093
266 nmdc:mga06r32_321092_c1 3300050510 Bacteria 1534
267 nmdc:mga08y16_177478_c1 3300050511 Bacteria 2212
268 nmdc:mga08y16_1842_c1 3300050511 Bacteria 21509
269 nmdc:mga08y16_458_c1 3300050511 Bacteria 38004
270 nmdc:mga0n895_22099_c1 3300050512 Bacteria 5962
271 nmdc:mga0rr50_776920_c1 3300050513 Bacteria 817
272 nmdc:mga0a205_4241_c1 3300050515 Bacteria 12858
273 nmdc:mga0a205_900458_c1 3300050515 Unclassified 732
274 Ga0495601_0080728 3300053077 Bacteria 2087
275 Ga0495619_0251757 3300053085 Bacteria 1224
276 Ga0501084_0010700 3300054114 Bacteria 7593
277 Ga0501084_0483090 3300054114 Bacteria 1047
278 Ga0590071_004219 3300059421 Bacteria 3499
279 Ga0590071_009362 3300059421 Bacteria 2301
280 Ga0590075_019742 3300059424 Bacteria 1675
281 Ga0590077_009723 3300059426 Bacteria 1976
282 Ga0590077_038869 3300059426 Bacteria 1054
283 Ga0501082_0243614 3300060353 Bacteria 1565
284 Ga0501082_0442433 3300060353 Unclassified 1135
285 Ga0501082_0442718 3300060353 Bacteria 1135
286 Ga0501082_0663145 3300060353 Bacteria 913
287 Ga0530510_0022188 3300061734 Bacteria 4521
288 Ga0530510_0036274 3300061734 Unclassified 3554
289 Ga0530510_0175162 3300061734 Bacteria 1590
290 Ga0501079_0298340
291 JGI24034J26672_10017801
292 Ga0065712_10082399
293 Ga0065715_10508279
294 Ga0070683_100960690
295 Ga0070690_101525802
296 Ga0070670_100319228
297 Ga0070670_100597715
298 Ga0070670_100718649
299 Ga0070677_10730852
300 Ga0068868_100066849
301 Ga0070668_100357657
302 Ga0070669_101182448
303 Ga0070675_101575371
304 Ga0070671_100178525
305 Ga0070674_100009471
306 Ga0070673_100200527
307 Ga0070667_100437375
308 Ga0070667_100858587
309 Ga0070713_100420877
310 Ga0070700_100115919
311 Ga0070678_100078289
312 Ga0070685_10131197
313 Ga0070684_100282063
314 Ga0070672_101270502
315 Ga0070686_100589923
316 Ga0070665_100059897
317 Ga0070665_101677213
318 Ga0068852_100232429
319 Ga0068859_100930697
320 Ga0068870_10919877
321 Ga0068860_100942869
322 Ga0068860_102214962
323 Ga0068862_100784562
324 Ga0075365_10005758
325 Ga0075365_10021281
326 Ga0075368_10050168
327 Ga0075363_100105617
328 Ga0075364_10002611
329 Ga0075364_10037796
330 Ga0075364_10202151
331 Ga0075362_10002386
332 Ga0075367_10021586
333 Ga0075367_10023807
334 Ga0075366_10170688
335 Ga0075366_10246839
336 Ga0075370_10287586
337 Ga0075428_100000338
338 Ga0075428_100053606
339 Ga0075430_100000794
340 Ga0075430_100014780
341 Ga0075430_100018975
342 Ga0075430_100036163
343 Ga0075430_100426792
344 Ga0075431_100013194
345 Ga0075431_100025304
346 Ga0075431_100089558
347 Ga0075431_100245271
348 Ga0075433_10001777
349 Ga0075434_100009573
350 Ga0075429_100012519
351 Ga0075429_100119104
352 Ga0068865_100206008
353 Ga0097620_100930778
354 Ga0075435_100145605
355 Ga0111539_10001433
356 Ga0111539_10001692
357 Ga0111539_10137581
358 Ga0114129_10001635
359 Ga0114129_10020639
360 Ga0114129_10024235
361 Ga0114129_10143570
362 Ga0114129_10843756
363 Ga0105242_10659340
364 Ga0105248_10942961
365 Ga0105246_10299693
366 Ga0157374_10501468
367 Ga0157378_10481252
368 Ga0163163_10000071
369 Ga0157379_10485225
370 Ga0157379_10674370
371 Ga0157376_10335845
372 Ga0157376_10883147
373 Ga0207697_10000485
374 Ga0207688_10002387
375 Ga0207705_11173566
376 Ga0207650_10528210
377 Ga0207644_10131831
378 Ga0207706_10303076
379 Ga0207686_10917854
380 Ga0207670_10458372
381 Ga0207669_10802589
382 Ga0207669_11240822
383 Ga0207711_10602495
384 Ga0207651_10147275
385 Ga0207651_10479704
386 Ga0207668_10088073
387 Ga0207668_10692546
388 Ga0207658_10343968
389 Ga0207677_10614424
390 Ga0207708_10110111
391 Ga0207708_10447319
392 Ga0207683_10138771
393 Ga0209971_1044231
394 Ga0209813_10084153
395 Ga0207428_10001054
396 Ga0207428_10003762
397 Ga0207428_10424917
398 Ga0268264_11060953
399 Ga0316182_1280193
400 Ga0307408_100058733
401 Ga0307408_100078269
402 Ga0307408_100168332
403 Ga0307408_100510207
404 Ga0307405_10672163
405 Ga0307405_11544755
406 Ga0307413_10444772
407 Ga0307410_10339984
408 Ga0307406_10180222
409 Ga0307407_10010621
410 Ga0307412_10097944
411 Ga0307412_10277635
412 Ga0307412_10291203
413 Ga0307412_10477510
414 Ga0307412_11581214
415 Ga0307412_12049925
416 Ga0307409_100020881
417 Ga0307416_100033504
418 Ga0307416_100089334
419 Ga0307416_100214033
420 Ga0307416_100279329
421 Ga0307416_100296495
422 Ga0307416_100524394
423 Ga0307416_100689979
424 Ga0307414_11429907
425 Ga0307411_10061693
426 Ga0307411_10281206
427 Ga0307411_10543528
428 Ga0307415_101175245
429 Ga0307415_101637217
430 Ga0373923_0194676
431 Ga0373933_0219582
432 Ga0373937_0010272
433 Ga0395905_0196761
434 Ga0436365_1130532
435 Ga0439436_0077165
436 Ga0451797_1476807
437 Ga0439431_0152221
438 Ga0439441_034065
439 Ga0439442_016989
440 Ga0439450_002117
441 Ga0439457_009492
442 Ga0439462_0020813
443 Ga0439446_0011458
444 Ga0439446_0114031
445 Ga0439435_0010798
446 Ga0439435_0014210
447 Ga0439435_0039423
448 Ga0439435_0145895
449 Ga0439444_0006105
450 Ga0439464_0000253
451 Ga0451576_0095414
452 Ga0495603_0129813
453 Ga0495608_0177885
454 Ga0495667_0631501
455 Ga0495646_0293673
456 Ga0495600_0190430
457 Ga0495674_0261433
458 Ga0495680_0164768
459 Ga0495602_0353849
460 Ga0496101_0211469
461 Ga0496102_0007276
462 Ga0496104_0671152
463 Ga0496105_0502206
464 Ga0496105_1030155
465 Ga0496106_0086949
466 Ga0496106_0313411
467 Ga0496106_0822415
468 Ga0496107_0881308
469 Ga0496108_0055662
470 Ga0496108_0638711
471 Ga0496109_0096215
472 Ga0496110_0035113
473 Ga0496110_1308416
474 Ga0496110_1528636
475 Ga0496111_0107520
476 Ga0496112_0004474
477 Ga0496112_0026777
478 Ga0496114_0259519
479 Ga0501298_019385
480 Ga0501299_005223
481 Ga0501031_0150112
482 Ga0501032_0178090
483 Ga0501033_0803407
484 Ga0501039_0265672
485 Ga0501040_0010140
486 Ga0501041_0890839
487 Ga0501042_0027789
488 Ga0501043_0299636
489 Ga0501043_0950521
490 Ga0501046_0194956
491 Ga0501071_0026247
492 Ga0501071_0452735
493 Ga0501072_0223369
494 Ga0501072_0257966
495 Ga0501072_0608100
496 Ga0501072_0675448
497 Ga0501072_1289112
498 Ga0501074_0063644
499 Ga0501074_0212911
500 Ga0501074_0259804
501 Ga0501074_0263441
502 Ga0501075_0102560
503 Ga0501075_0248729
504 Ga0501075_0386446
505 Ga0501075_0537143
506 Ga0501076_0023905
507 Ga0501076_0122901
508 Ga0501076_0186020
509 Ga0501077_0019491
510 Ga0501077_0048623
511 Ga0501077_0201254
512 Ga0501208_020735
513 Ga0501233_019885
514 Ga0501235_033225
515 Ga0501079_0866992
516 Ga0501080_0106523
517 Ga0501080_0500411
518 Ga0501080_0501051
519 Ga0501081_0103526
520 Ga0501081_0210586
521 Ga0501081_0484941
522 Ga0501083_0885688
523 Ga0501035_0630409
524 Ga0501045_0007005
525 Ga0501045_0073210
526 Ga0501045_0162326
527 Ga0501045_0404884
528 Ga0501045_0459511
529 nmdc:mga03683_62958_c1
530 nmdc:mga00v17_241150_c1
531 nmdc:mga00v17_4855_c1
532 nmdc:mga00v17_64916_c1
533 nmdc:mga00v17_979_c1
534 nmdc:mga0yw44_123899_c1
535 nmdc:mga0yw44_159662_c1
536 nmdc:mga0yw44_31975_c1
537 nmdc:mga0k408_2615_c1
538 nmdc:mga0k408_4884_c1
539 nmdc:mga06z11_25859_c1
540 nmdc:mga06z11_56993_c1
541 nmdc:mga05p37_33321_c1
542 nmdc:mga05p37_3461_c1
543 nmdc:mga05p37_525395_c1
544 nmdc:mga05p37_52912_c2
545 nmdc:mga09592_122829_c1
546 nmdc:mga09592_55942_c1
547 nmdc:mga09592_78418_c1
548 nmdc:mga0qj67_17803_c1
549 nmdc:mga0qj67_33498_c1
550 nmdc:mga0qj67_4712_c1
551 nmdc:mga06r32_11651_c1
552 nmdc:mga06r32_141005_c1
553 nmdc:mga06r32_16920_c1
554 nmdc:mga06r32_30108_c1
555 nmdc:mga06r32_321092_c1
556 nmdc:mga08y16_177478_c1
557 nmdc:mga08y16_1842_c1
558 nmdc:mga08y16_458_c1
559 nmdc:mga0n895_22099_c1
560 nmdc:mga0rr50_776920_c1
561 nmdc:mga0a205_4241_c1
562 nmdc:mga0a205_900458_c1
563 Ga0495601_0080728
564 Ga0495619_0251757
565 Ga0501084_0010700
566 Ga0501084_0483090
567 Ga0590071_004219
568 Ga0590071_009362
569 Ga0590075_019742
570 Ga0590077_009723
571 Ga0590077_038869
572 Ga0501082_0243614
573 Ga0501082_0442433
574 Ga0501082_0442718
575 Ga0501082_0663145
576 Ga0530510_0022188
577 Ga0530510_0036274
578 Ga0530510_0175162

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01590

GAF

GAF domain

27

151

0.82

PF13185

GAF_2

GAF domain

25

152

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mmn-assembly2.cif.gz_E structural and biochemical analysis of type ii free methionine-r-sulfoxide reductase from thermoplasma acidophilum 0.9691 30 160
4mn7-assembly1.cif.gz_B structural and biochemical analysis of type ii free methionine-r-sulfoxide reductase from thermoplasma acidophilum 0.9556 30 160
3rfb-assembly1.cif.gz_A structure of frmsr 0.9496 13 157
3mmh-assembly1.cif.gz_B x-ray structure of free methionine-r-sulfoxide reductase from neisseria meningitidis in complex with its substrate 0.9458 13 162
3ksf-assembly3.cif.gz_F structure of frmsr of staphylococcus aureus (reduced form) 0.9457 11 158
ID Description Score Start End Superfamily
4mmnA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9694 30 160 3.30.450.40
af_Q8MTJ7_3_158_3.30.450.40 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9503 13 155 3.30.450.40
3rfbA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9496 13 157 3.30.450.40
1vhmA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9264 13 158 3.30.450.40
af_Q4DSC2_14_185_3.30.450.40 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9231 13 157 3.30.450.40
ID Description Score Start End GO Terms
AF-A0A0T6AN32-F1-model_v4 GAF sensor protein, GAF domain-containing protein 0.9901 82 156
AF-A0A535A4K8-F1-model_v4 GAF domain-containing protein 0.988 20 157
AF-A0A7J2SP33-F1-model_v4 GAF domain-containing protein 0.987 50 156 GO:0005829
GO:0033745
AF-A0A1Q7BAN1-F1-model_v4 GAF domain-containing protein 0.9854 52 162
AF-A0A537JKS5-F1-model_v4 GAF domain-containing protein 0.985 27 156

Map