F389430

General Info

Members Datasets Scaffolds Average Seq Length
289 213 578 224

Family's Representative Sequence

Representative Sequence 3300049579|Ga0501043_0057515|Ga0501043_0057515_2050_2847
Length 252
Sequence LPECRSGGDDAAGRAREFNDTLAMMREIVFDTETTGLDPFQGDRMVEIGCIELVNRFPTGKTFHCYFNPERDMPEAAFKVHGLGIDFLKDKPLFAHKVEELTMFDLGFLNAELERAGGAVVRRERLVDTLMLARRKHPGASNRLDDLCVRYRIDNSRRTKHGALLDAELLAEVYVELIGARQALLGLAEAVNAAGEARTAAVAMHVRPRPLAARGSAEEHAAHREFIAALGENAIWRKYGSGETPDSQAGIG

Samples

Sample ID Description Type Environment
1 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
91 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
92 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
93 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
102 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
113 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
114 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
115 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
116 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
117 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
118 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
119 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
126 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
127 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
128 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
129 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
130 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
131 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
132 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
133 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
152 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
155 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
182 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
186 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
187 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
190 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
193 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
194 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
195 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
196 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
197 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
198 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
199 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
200 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
201 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
202 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
203 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
204 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
205 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
206 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
207 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
208 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
209 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
210 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
211 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
212 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
213 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.84
Nodule 0
Rhizoplane 6.57
Rhizosphere 77.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501043_0057515 3300049579 Bacteria 3053
2 Ga0070676_10329298 3300005328 Bacteria 1044
3 Ga0070676_10480138 3300005328 Bacteria 879
4 Ga0070670_100118754 3300005331 Bacteria 2281
5 Ga0070670_100199187 3300005331 Bacteria 1740
6 Ga0070670_100471697 3300005331 Bacteria 1114
7 Ga0070670_100528161 3300005331 Bacteria 1051
8 Ga0070670_100781263 3300005331 Bacteria 862
9 Ga0070689_100032858 3300005340 Bacteria 3950
10 Ga0070689_100054330 3300005340 Bacteria 3100
11 Ga0070689_100420169 3300005340 Bacteria 1133
12 Ga0070687_100066504 3300005343 Bacteria 1920
13 Ga0070669_100185974 3300005353 Bacteria 1627
14 Ga0070669_100280951 3300005353 Bacteria 1334
15 Ga0070675_100336961 3300005354 Bacteria 1335
16 Ga0070674_100002552 3300005356 Bacteria 10084
17 Ga0070709_10151195 3300005434 Bacteria 1605
18 Ga0070709_10182652 3300005434 Bacteria 1474
19 Ga0070714_100012021 3300005435 Bacteria 6890
20 Ga0070714_100363279 3300005435 Bacteria 1361
21 Ga0070713_100036310 3300005436 Bacteria 3976
22 Ga0070713_100072549 3300005436 Bacteria 2912
23 Ga0070710_10065540 3300005437 Bacteria 2081
24 Ga0070678_100025790 3300005456 Bacteria 3962
25 Ga0070681_10323894 3300005458 Bacteria 1451
26 Ga0068867_100061863 3300005459 Bacteria 2780
27 Ga0070684_100277266 3300005535 Bacteria 1536
28 Ga0068853_100739636 3300005539 Bacteria 940
29 Ga0070686_100349385 3300005544 Bacteria 1111
30 Ga0070665_100241312 3300005548 Bacteria 1808
31 Ga0070665_100954601 3300005548 Bacteria 870
32 Ga0070664_100596618 3300005564 Bacteria 1024
33 Ga0068857_100660735 3300005577 Bacteria 991
34 Ga0070702_100298810 3300005615 Bacteria 1113
35 Ga0068859_100054120 3300005617 Bacteria 4036
36 Ga0068859_100692797 3300005617 Bacteria 1110
37 Ga0068864_101089910 3300005618 Bacteria 794
38 Ga0068861_100594375 3300005719 Bacteria 1015
39 Ga0068870_10278978 3300005840 Bacteria 1047
40 Ga0068863_100049178 3300005841 Bacteria 3998
41 Ga0070717_10295650 3300006028 Bacteria 1439
42 Ga0075365_10247255 3300006038 Bacteria 1253
43 Ga0075368_10021540 3300006042 Bacteria 2449
44 Ga0075368_10071874 3300006042 Bacteria 1398
45 Ga0075363_100036872 3300006048 Bacteria 2566
46 Ga0075364_10018247 3300006051 Bacteria 4391
47 Ga0070712_100001731 3300006175 Bacteria 13353
48 Ga0070712_100463459 3300006175 Bacteria 1057
49 Ga0075362_10019561 3300006177 Bacteria 2818
50 Ga0075362_10132323 3300006177 Bacteria 1187
51 Ga0075367_10036147 3300006178 Bacteria 2862
52 Ga0075367_10274095 3300006178 Bacteria 1060
53 Ga0075367_10344700 3300006178 Bacteria 940
54 Ga0075369_10018802 3300006186 Bacteria 2816
55 Ga0075366_10076365 3300006195 Bacteria 1999
56 Ga0075366_10076366 3300006195 Bacteria 1999
57 Ga0075366_10088918 3300006195 Bacteria 1849
58 Ga0075370_10020566 3300006353 Bacteria 3610
59 Ga0075370_10354553 3300006353 Bacteria 877
60 Ga0075433_10472134 3300006852 Bacteria 1105
61 Ga0068865_100067540 3300006881 Bacteria 2526
62 Ga0097620_100054119 3300006931 Bacteria 4036
63 Ga0097620_100692795 3300006931 Bacteria 1110
64 Ga0099795_10044332 3300007788 Bacteria 1595
65 Ga0111539_10127403 3300009094 Bacteria 2982
66 Ga0105245_10041445 3300009098 Bacteria 4104
67 Ga0105247_10202614 3300009101 Bacteria 1334
68 Ga0114129_11113987 3300009147 Bacteria 988
69 Ga0105243_10063526 3300009148 Bacteria 2959
70 Ga0105248_10021356 3300009177 Bacteria 7175
71 Ga0105248_10287762 3300009177 Bacteria 1850
72 Ga0105238_10023448 3300009551 Bacteria 6291
73 Ga0105249_10616622 3300009553 Bacteria 1140
74 Ga0105246_10201185 3300011119 Bacteria 1548
75 Ga0105246_10839986 3300011119 Bacteria 818
76 Ga0157378_10482226 3300013297 Bacteria 1236
77 Ga0163162_10325458 3300013306 Bacteria 1669
78 Ga0157375_10161950 3300013308 Bacteria 2380
79 Ga0157375_10245367 3300013308 Bacteria 1951
80 Ga0163163_10789232 3300014325 Bacteria 1013
81 Ga0157380_10038018 3300014326 Bacteria 3734
82 Ga0157380_10084901 3300014326 Bacteria 2597
83 Ga0157380_10635764 3300014326 Bacteria 1062
84 Ga0182008_10050830 3300014497 Bacteria 2057
85 Ga0157377_10360203 3300014745 Bacteria 979
86 Ga0213876_10003239 3300021384 Bacteria 9341
87 Ga0209758_1022410 3300025297 Bacteria 2898
88 Ga0209758_1078626 3300025297 Bacteria 1006
89 Ga0207426_1021673 3300025302 Bacteria 2218
90 Ga0207682_10001821 3300025893 Bacteria 9721
91 Ga0207692_10174687 3300025898 Bacteria 1247
92 Ga0207710_10015591 3300025900 Bacteria 3214
93 Ga0207645_10080173 3300025907 Bacteria 2092
94 Ga0207643_10095824 3300025908 Bacteria 1735
95 Ga0207693_10013418 3300025915 Bacteria 6606
96 Ga0207662_10021272 3300025918 Bacteria 3706
97 Ga0207662_10043577 3300025918 Bacteria 2647
98 Ga0207681_10044069 3300025923 Bacteria 2989
99 Ga0207694_10079706 3300025924 Bacteria 2569
100 Ga0207650_10201466 3300025925 Bacteria 1595
101 Ga0207659_10241232 3300025926 Bacteria 1462
102 Ga0207700_10026056 3300025928 Bacteria 4072
103 Ga0207700_10066762 3300025928 Bacteria 2750
104 Ga0207700_10554204 3300025928 Bacteria 1020
105 Ga0207664_10060315 3300025929 Bacteria 3023
106 Ga0207664_10623056 3300025929 Bacteria 969
107 Ga0207644_10028232 3300025931 Bacteria 3883
108 Ga0207706_10020446 3300025933 Bacteria 5951
109 Ga0207706_10045926 3300025933 Bacteria 3868
110 Ga0207709_10116978 3300025935 Bacteria 1793
111 Ga0207669_10261036 3300025937 Bacteria 1295
112 Ga0207669_10321257 3300025937 Bacteria 1185
113 Ga0207669_10338388 3300025937 Bacteria 1158
114 Ga0207669_10615062 3300025937 Bacteria 884
115 Ga0207691_10004918 3300025940 Bacteria 12892
116 Ga0207691_10098275 3300025940 Bacteria 2615
117 Ga0207689_10184588 3300025942 Bacteria 1720
118 Ga0207689_10213621 3300025942 Bacteria 1594
119 Ga0207651_10087763 3300025960 Bacteria 2265
120 Ga0207708_10583359 3300026075 Bacteria 945
121 Ga0207641_10147692 3300026088 Bacteria 2127
122 Ga0207648_10747637 3300026089 Bacteria 908
123 Ga0207675_100159431 3300026118 Bacteria 2151
124 Ga0207675_100189661 3300026118 Bacteria 1971
125 Ga0207683_10015051 3300026121 Bacteria 6584
126 Ga0209813_10034876 3300027866 Bacteria 1504
127 Ga0209813_10035683 3300027866 Bacteria 1490
128 Ga0265325_10003966 3300031241 Bacteria 9472
129 Ga0307513_10180336 3300031456 Bacteria 1976
130 Ga0373938_0012731 3300034957 Bacteria 1584
131 Ga0373926_0053803 3300035083 Bacteria 1457
132 Ga0373944_0001462 3300035089 Bacteria 5969
133 Ga0373949_0008475 3300035090 Bacteria 2250
134 Ga0373936_0224716 3300035113 Bacteria 834
135 Ga0373939_0014828 3300035114 Bacteria 2030
136 Ga0373945_0003160 3300035116 Bacteria 5165
137 Ga0373954_0101006 3300035118 Bacteria 1392
138 Ga0373943_0000193 3300035170 Bacteria 24677
139 Ga0373943_0085521 3300035170 Bacteria 1624
140 Ga0373946_0003004 3300035171 Bacteria 5977
141 Ga0373955_0024404 3300035172 Bacteria 3093
142 Ga0373961_0018828 3300035241 Bacteria 1808
143 Ga0373924_0129983 3300035410 Bacteria 1096
144 Ga0373931_0035140 3300035691 Bacteria 2604
145 Ga0373931_0139549 3300035691 Bacteria 1402
146 Ga0373935_0042181 3300035692 Bacteria 2868
147 Ga0373935_0440916 3300035692 Bacteria 939
148 Ga0373927_0001067 3300035695 Bacteria 20963
149 Ga0373927_0434780 3300035695 Bacteria 866
150 Ga0373933_0318261 3300035724 Bacteria 1009
151 Ga0373947_0000076 3300035725 Bacteria 49938
152 Ga0373947_0090305 3300035725 Bacteria 1909
153 Ga0373937_0702356 3300036401 Bacteria 958
154 Ga0373925_0001700 3300037068 Bacteria 18531
155 Ga0373925_0079479 3300037068 Bacteria 2492
156 Ga0436365_0009035 3300039437 Bacteria 2931
157 Ga0436365_0946034 3300039437 Bacteria 9968
158 Ga0436365_0952280 3300039437 Bacteria 4799
159 Ga0436365_1569454 3300039437 Bacteria 3357
160 Ga0436362_1146803 3300039453 Bacteria 3324
161 Ga0439453_0000176 3300041408 Bacteria 5979
162 Ga0439453_0004565 3300041408 Bacteria 2063
163 Ga0439431_0068317 3300041997 Bacteria 944
164 Ga0439441_009077 3300042001 Bacteria 1639
165 Ga0439443_004557 3300042003 Bacteria 1813
166 Ga0439446_0087116 3300042156 Bacteria 974
167 Ga0439435_0007782 3300042436 Bacteria 2466
168 Ga0439459_0023166 3300042438 Bacteria 1208
169 Ga0439440_0045209 3300042993 Bacteria 1085
170 Ga0439440_0072101 3300042993 Bacteria 901
171 Ga0466957_0046818 3300044842 Bacteria 2627
172 Ga0466959_0209075 3300045049 Bacteria 1356
173 Ga0466958_0322807 3300045836 Bacteria 992
174 Ga0466967_0095938 3300045976 Bacteria 2704
175 Ga0466967_0276728 3300045976 Bacteria 1610
176 Ga0495592_0115241 3300046454 Bacteria 1897
177 Ga0495592_0122665 3300046454 Bacteria 1826
178 Ga0495638_0012550 3300046460 Bacteria 5801
179 Ga0495653_0140444 3300046463 Bacteria 1700
180 Ga0495605_0051996 3300046474 Bacteria 1993
181 Ga0495639_0050384 3300046475 Bacteria 1891
182 Ga0495662_0130666 3300046476 Bacteria 1234
183 Ga0495608_0315849 3300046511 Bacteria 966
184 Ga0495618_0185308 3300046514 Bacteria 1321
185 Ga0495663_0033579 3300046525 Bacteria 1533
186 Ga0495666_0057252 3300046526 Bacteria 1866
187 Ga0495652_0364319 3300046529 Bacteria 1032
188 Ga0495665_0010011 3300046531 Bacteria 5137
189 Ga0495640_0203903 3300046533 Bacteria 1252
190 Ga0495621_0008616 3300046539 Bacteria 3066
191 Ga0495667_0112805 3300046559 Bacteria 1757
192 Ga0495656_0085142 3300046615 Bacteria 1435
193 Ga0495668_0054508 3300046616 Bacteria 2210
194 Ga0495634_0012506 3300046642 Bacteria 6140
195 Ga0495635_0007394 3300046663 Bacteria 7666
196 Ga0495647_0036249 3300046681 Bacteria 1856
197 Ga0495613_0133571 3300046689 Bacteria 1776
198 Ga0495624_0014137 3300046690 Bacteria 5426
199 Ga0495600_0379699 3300046809 Bacteria 882
200 Ga0495581_0076795 3300047315 Bacteria 1932
201 Ga0495674_0356972 3300047319 Bacteria 1186
202 Ga0495676_0047922 3300047321 Bacteria 3450
203 Ga0495680_0112487 3300047322 Bacteria 2017
204 Ga0495680_0121614 3300047322 Bacteria 1927
205 Ga0495675_0093592 3300047444 Bacteria 1885
206 Ga0495685_010826 3300047447 Bacteria 3065
207 Ga0495684_0010198 3300047471 Bacteria 7267
208 Ga0495684_0034402 3300047471 Bacteria 3887
209 Ga0495593_0022874 3300047673 Bacteria 3478
210 Ga0495615_0057962 3300048090 Bacteria 1015
211 Ga0496100_0027271 3300048903 Bacteria 3511
212 Ga0496101_0022852 3300048904 Bacteria 4312
213 Ga0496102_0028200 3300048905 Bacteria 5014
214 Ga0496104_0014013 3300048907 Bacteria 7234
215 Ga0496105_0012329 3300048908 Bacteria 6768
216 Ga0496106_0031663 3300048909 Bacteria 3941
217 Ga0496107_0029403 3300048910 Bacteria 3908
218 Ga0496108_0026989 3300048911 Bacteria 4739
219 Ga0496109_0032054 3300048912 Bacteria 4721
220 Ga0496109_0807249 3300048912 Bacteria 876
221 Ga0496110_0361020 3300048913 Bacteria 1323
222 Ga0496111_0001884 3300048914 Bacteria 12408
223 Ga0496112_0078691 3300048915 Bacteria 3260
224 Ga0496112_0316222 3300048915 Bacteria 1506
225 Ga0496113_0030381 3300048916 Bacteria 3911
226 Ga0496114_0130897 3300048917 Bacteria 2166
227 Ga0496115_0021595 3300048918 Bacteria 4974
228 Ga0496115_0241080 3300048918 Bacteria 1490
229 Ga0496115_0663394 3300048918 Bacteria 823
230 Ga0496126_0318243 3300048929 Bacteria 1280
231 Ga0501032_0205002 3300049569 Bacteria 1286
232 Ga0501033_0082085 3300049570 Bacteria 2364
233 Ga0501033_0587658 3300049570 Bacteria 764
234 Ga0501034_0147490 3300049571 Bacteria 2329
235 Ga0501034_0224335 3300049571 Bacteria 1830
236 Ga0501036_0037417 3300049572 Bacteria 4105
237 Ga0501037_0034248 3300049573 Bacteria 3747
238 Ga0501038_0071015 3300049574 Bacteria 2954
239 Ga0501038_0173143 3300049574 Bacteria 1746
240 Ga0501039_0100212 3300049575 Bacteria 2260
241 Ga0501041_0214308 3300049577 Bacteria 1208
242 Ga0501043_0308683 3300049579 Bacteria 1207
243 Ga0501047_0332609 3300049581 Bacteria 1357
244 Ga0501047_0463889 3300049581 Bacteria 1095
245 Ga0501067_0098510 3300049583 Bacteria 1624
246 Ga0501068_0208202 3300049584 Bacteria 1241
247 Ga0501070_0037040 3300049586 Bacteria 4072
248 Ga0501070_0312263 3300049586 Bacteria 1279
249 Ga0501073_0200370 3300049589 Bacteria 1380
250 Ga0501074_0217270 3300049590 Bacteria 1361
251 Ga0501076_0415691 3300049592 Bacteria 1106
252 Ga0501079_0046174 3300049741 Bacteria 3361
253 Ga0501080_0014094 3300049742 Bacteria 7358
254 Ga0501080_0099116 3300049742 Bacteria 2704
255 Ga0501080_0388557 3300049742 Bacteria 1256
256 Ga0501083_0061529 3300049744 Bacteria 2506
257 Ga0501035_0191634 3300049822 Bacteria 1757
258 Ga0501035_0687068 3300049822 Bacteria 826
259 Ga0501044_0000122 3300049823 Bacteria 93246
260 Ga0501044_0179669 3300049823 Bacteria 2083
261 Ga0501044_0804684 3300049823 Bacteria 819
262 Ga0501045_0110434 3300049824 Bacteria 2039
263 nmdc:mga03683_18514_c1 3300050489 Bacteria 2648
264 nmdc:mga03n38_195163_c1 3300050490 Bacteria 1045
265 nmdc:mga00v17_155271_c1 3300050491 Bacteria 1471
266 nmdc:mga0yw44_169318_c1 3300050492 Bacteria 1434
267 nmdc:mga0yw44_183397_c1 3300050492 Bacteria 1378
268 nmdc:mga0k408_21946_c1 3300050493 Bacteria 3591
269 nmdc:mga0k408_33871_c1 3300050493 Bacteria 2923
270 nmdc:mga06z11_203209_c1 3300050494 Bacteria 1152
271 nmdc:mga06z11_71527_c1 3300050494 Bacteria 1837
272 nmdc:mga04h51_19721_c1 3300050495 Bacteria 2003
273 nmdc:mga07m45_258219_c1 3300050496 Bacteria 1014
274 nmdc:mga07m45_52193_c1 3300050496 Bacteria 2307
275 nmdc:mga06r32_739979_c1 3300050510 Bacteria 947
276 nmdc:mga08y16_108555_c1 3300050511 Bacteria 2889
277 nmdc:mga0sz30_168559_c1 3300050516 Bacteria 971
278 Ga0495601_0098777 3300053077 Bacteria 1884
279 Ga0495612_0078373 3300053078 Bacteria 1386
280 Ga0495595_0013009 3300053084 Bacteria 3510
281 Ga0495595_0049311 3300053084 Bacteria 1947
282 Ga0495619_0038733 3300053085 Bacteria 3110
283 Ga0500641_0044778 3300053096 Bacteria 1800
284 Ga0500641_0045415 3300053096 Bacteria 1789
285 Ga0500595_005148 3300053119 Bacteria 5739
286 Ga0500577_0062025 3300053142 Bacteria 1441
287 Ga0500604_0077150 3300053151 Bacteria 1071
288 Ga0500616_0123826 3300053153 Bacteria 1231
289 Ga0501084_0174878 3300054114 Bacteria 1812
290 Ga0501043_0057515
291 Ga0070676_10329298
292 Ga0070676_10480138
293 Ga0070670_100118754
294 Ga0070670_100199187
295 Ga0070670_100471697
296 Ga0070670_100528161
297 Ga0070670_100781263
298 Ga0070689_100032858
299 Ga0070689_100054330
300 Ga0070689_100420169
301 Ga0070687_100066504
302 Ga0070669_100185974
303 Ga0070669_100280951
304 Ga0070675_100336961
305 Ga0070674_100002552
306 Ga0070709_10151195
307 Ga0070709_10182652
308 Ga0070714_100012021
309 Ga0070714_100363279
310 Ga0070713_100036310
311 Ga0070713_100072549
312 Ga0070710_10065540
313 Ga0070678_100025790
314 Ga0070681_10323894
315 Ga0068867_100061863
316 Ga0070684_100277266
317 Ga0068853_100739636
318 Ga0070686_100349385
319 Ga0070665_100241312
320 Ga0070665_100954601
321 Ga0070664_100596618
322 Ga0068857_100660735
323 Ga0070702_100298810
324 Ga0068859_100054120
325 Ga0068859_100692797
326 Ga0068864_101089910
327 Ga0068861_100594375
328 Ga0068870_10278978
329 Ga0068863_100049178
330 Ga0070717_10295650
331 Ga0075365_10247255
332 Ga0075368_10021540
333 Ga0075368_10071874
334 Ga0075363_100036872
335 Ga0075364_10018247
336 Ga0070712_100001731
337 Ga0070712_100463459
338 Ga0075362_10019561
339 Ga0075362_10132323
340 Ga0075367_10036147
341 Ga0075367_10274095
342 Ga0075367_10344700
343 Ga0075369_10018802
344 Ga0075366_10076365
345 Ga0075366_10076366
346 Ga0075366_10088918
347 Ga0075370_10020566
348 Ga0075370_10354553
349 Ga0075433_10472134
350 Ga0068865_100067540
351 Ga0097620_100054119
352 Ga0097620_100692795
353 Ga0099795_10044332
354 Ga0111539_10127403
355 Ga0105245_10041445
356 Ga0105247_10202614
357 Ga0114129_11113987
358 Ga0105243_10063526
359 Ga0105248_10021356
360 Ga0105248_10287762
361 Ga0105238_10023448
362 Ga0105249_10616622
363 Ga0105246_10201185
364 Ga0105246_10839986
365 Ga0157378_10482226
366 Ga0163162_10325458
367 Ga0157375_10161950
368 Ga0157375_10245367
369 Ga0163163_10789232
370 Ga0157380_10038018
371 Ga0157380_10084901
372 Ga0157380_10635764
373 Ga0182008_10050830
374 Ga0157377_10360203
375 Ga0213876_10003239
376 Ga0209758_1022410
377 Ga0209758_1078626
378 Ga0207426_1021673
379 Ga0207682_10001821
380 Ga0207692_10174687
381 Ga0207710_10015591
382 Ga0207645_10080173
383 Ga0207643_10095824
384 Ga0207693_10013418
385 Ga0207662_10021272
386 Ga0207662_10043577
387 Ga0207681_10044069
388 Ga0207694_10079706
389 Ga0207650_10201466
390 Ga0207659_10241232
391 Ga0207700_10026056
392 Ga0207700_10066762
393 Ga0207700_10554204
394 Ga0207664_10060315
395 Ga0207664_10623056
396 Ga0207644_10028232
397 Ga0207706_10020446
398 Ga0207706_10045926
399 Ga0207709_10116978
400 Ga0207669_10261036
401 Ga0207669_10321257
402 Ga0207669_10338388
403 Ga0207669_10615062
404 Ga0207691_10004918
405 Ga0207691_10098275
406 Ga0207689_10184588
407 Ga0207689_10213621
408 Ga0207651_10087763
409 Ga0207708_10583359
410 Ga0207641_10147692
411 Ga0207648_10747637
412 Ga0207675_100159431
413 Ga0207675_100189661
414 Ga0207683_10015051
415 Ga0209813_10034876
416 Ga0209813_10035683
417 Ga0265325_10003966
418 Ga0307513_10180336
419 Ga0373938_0012731
420 Ga0373926_0053803
421 Ga0373944_0001462
422 Ga0373949_0008475
423 Ga0373936_0224716
424 Ga0373939_0014828
425 Ga0373945_0003160
426 Ga0373954_0101006
427 Ga0373943_0000193
428 Ga0373943_0085521
429 Ga0373946_0003004
430 Ga0373955_0024404
431 Ga0373961_0018828
432 Ga0373924_0129983
433 Ga0373931_0035140
434 Ga0373931_0139549
435 Ga0373935_0042181
436 Ga0373935_0440916
437 Ga0373927_0001067
438 Ga0373927_0434780
439 Ga0373933_0318261
440 Ga0373947_0000076
441 Ga0373947_0090305
442 Ga0373937_0702356
443 Ga0373925_0001700
444 Ga0373925_0079479
445 Ga0436365_0009035
446 Ga0436365_0946034
447 Ga0436365_0952280
448 Ga0436365_1569454
449 Ga0436362_1146803
450 Ga0439453_0000176
451 Ga0439453_0004565
452 Ga0439431_0068317
453 Ga0439441_009077
454 Ga0439443_004557
455 Ga0439446_0087116
456 Ga0439435_0007782
457 Ga0439459_0023166
458 Ga0439440_0045209
459 Ga0439440_0072101
460 Ga0466957_0046818
461 Ga0466959_0209075
462 Ga0466958_0322807
463 Ga0466967_0095938
464 Ga0466967_0276728
465 Ga0495592_0115241
466 Ga0495592_0122665
467 Ga0495638_0012550
468 Ga0495653_0140444
469 Ga0495605_0051996
470 Ga0495639_0050384
471 Ga0495662_0130666
472 Ga0495608_0315849
473 Ga0495618_0185308
474 Ga0495663_0033579
475 Ga0495666_0057252
476 Ga0495652_0364319
477 Ga0495665_0010011
478 Ga0495640_0203903
479 Ga0495621_0008616
480 Ga0495667_0112805
481 Ga0495656_0085142
482 Ga0495668_0054508
483 Ga0495634_0012506
484 Ga0495635_0007394
485 Ga0495647_0036249
486 Ga0495613_0133571
487 Ga0495624_0014137
488 Ga0495600_0379699
489 Ga0495581_0076795
490 Ga0495674_0356972
491 Ga0495676_0047922
492 Ga0495680_0112487
493 Ga0495680_0121614
494 Ga0495675_0093592
495 Ga0495685_010826
496 Ga0495684_0010198
497 Ga0495684_0034402
498 Ga0495593_0022874
499 Ga0495615_0057962
500 Ga0496100_0027271
501 Ga0496101_0022852
502 Ga0496102_0028200
503 Ga0496104_0014013
504 Ga0496105_0012329
505 Ga0496106_0031663
506 Ga0496107_0029403
507 Ga0496108_0026989
508 Ga0496109_0032054
509 Ga0496109_0807249
510 Ga0496110_0361020
511 Ga0496111_0001884
512 Ga0496112_0078691
513 Ga0496112_0316222
514 Ga0496113_0030381
515 Ga0496114_0130897
516 Ga0496115_0021595
517 Ga0496115_0241080
518 Ga0496115_0663394
519 Ga0496126_0318243
520 Ga0501032_0205002
521 Ga0501033_0082085
522 Ga0501033_0587658
523 Ga0501034_0147490
524 Ga0501034_0224335
525 Ga0501036_0037417
526 Ga0501037_0034248
527 Ga0501038_0071015
528 Ga0501038_0173143
529 Ga0501039_0100212
530 Ga0501041_0214308
531 Ga0501043_0308683
532 Ga0501047_0332609
533 Ga0501047_0463889
534 Ga0501067_0098510
535 Ga0501068_0208202
536 Ga0501070_0037040
537 Ga0501070_0312263
538 Ga0501073_0200370
539 Ga0501074_0217270
540 Ga0501076_0415691
541 Ga0501079_0046174
542 Ga0501080_0014094
543 Ga0501080_0099116
544 Ga0501080_0388557
545 Ga0501083_0061529
546 Ga0501035_0191634
547 Ga0501035_0687068
548 Ga0501044_0000122
549 Ga0501044_0179669
550 Ga0501044_0804684
551 Ga0501045_0110434
552 nmdc:mga03683_18514_c1
553 nmdc:mga03n38_195163_c1
554 nmdc:mga00v17_155271_c1
555 nmdc:mga0yw44_169318_c1
556 nmdc:mga0yw44_183397_c1
557 nmdc:mga0k408_21946_c1
558 nmdc:mga0k408_33871_c1
559 nmdc:mga06z11_203209_c1
560 nmdc:mga06z11_71527_c1
561 nmdc:mga04h51_19721_c1
562 nmdc:mga07m45_258219_c1
563 nmdc:mga07m45_52193_c1
564 nmdc:mga06r32_739979_c1
565 nmdc:mga08y16_108555_c1
566 nmdc:mga0sz30_168559_c1
567 Ga0495601_0098777
568 Ga0495612_0078373
569 Ga0495595_0013009
570 Ga0495595_0049311
571 Ga0495619_0038733
572 Ga0500641_0044778
573 Ga0500641_0045415
574 Ga0500595_005148
575 Ga0500577_0062025
576 Ga0500604_0077150
577 Ga0500616_0123826
578 Ga0501084_0174878

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00929

RNase_T

Exonuclease

28

174

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1j53-assembly1.cif.gz_A structure of the n-terminal exonuclease domain of the epsilon subunit of e.coli dna polymerase iii at ph 8.5 0.946 3 168
2ido-assembly1.cif.gz_A structure of the e. coli pol iii epsilon-hot proofreading complex 0.9274 1 168
2ido-assembly1.cif.gz_A structure of the e. coli pol iii epsilon-hot proofreading complex 0.9015 1 168
1j53-assembly1.cif.gz_A structure of the n-terminal exonuclease domain of the epsilon subunit of e.coli dna polymerase iii at ph 8.5 0.8987 3 168
8h2f-assembly1.cif.gz_A crystal structure of dnaq domain in complex witn tmp of streptococcus thermophilus strain dgcc 7710 0.8975 2 169
ID Description Score Start End Superfamily
af_B0G161_292_467_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9544 2 166 3.30.420.10
1j54A00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9452 3 168 3.30.420.10
af_Q2FYH5_2_169_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9329 2 169 3.30.420.10
2p1jB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9326 3 141 3.30.420.10
af_Q2G1Z8_409_554_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9286 2 138 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A3M2DS00-F1-model_v4 DNA polymerase III subunit epsilon 0.9994 1 127 GO:0003677
GO:0003887
GO:0005829
GO:0008408
GO:0045004
AF-A0A6L7KNI7-F1-model_v4 DNA polymerase III subunit epsilon 0.9967 1 108 GO:0003677
GO:0003887
GO:0005829
GO:0008408
GO:0045004
AF-A0A2R7RZC3-F1-model_v4 deleted 0.9952 2 168
AF-A0A059IUU7-F1-model_v4 deleted 0.992 1 168
AF-A0A257X0A7-F1-model_v4 DNA polymerase III subunit epsilon 0.992 2 103 GO:0003677
GO:0003887
GO:0005829
GO:0008408
GO:0045004

Map