F389278

General Info

Members Datasets Scaffolds Average Seq Length
289 257 578 246

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10102160|Ga0307407_101021601
Length 283
Sequence MPPVEARAGEASGVTPSREAWREAVIESITQETPTVRSFRLRPRVWRPFLAGQHVDVRLTAPDGYTAQRSYSVTSSPDDAGVLELAIERLDDGEVSPYFHEVAQAGDVIEVRGPFATHFAWRPEPDEPVLLVAGGSGVAPFMSMVRHRARLPVAPPMTLVYSARTWDDVIYREELLRHERRQDGLSVIVCLTRPAPGVTDAAGVPLEPGEGAVTGWGAPAIRRADFGRRVDRAILAEAVDRLCAPLRLAFVCGRNSFVDTVSTELLALDVAPDDIRTERYGGS

Samples

Sample ID Description Type Environment
1 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
86 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
105 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
114 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
123 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
132 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
141 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 2509276018 Mesorhizobium ciceri CMG6 Isolate Nodule
144 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
145 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
146 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
147 2738543013 Variovorax sp. BT01 Isolate Unclassified
148 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
149 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
150 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
151 2856328259 Mesorhizobium sp. Primo-B Isolate Nodule
152 2856334872 Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 Isolate Nodule
153 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
154 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
155 2869169390 Mesorhizobium sp. M7A.F.Ca.CA.001.10.2.1 Isolate Nodule
156 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
157 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
158 2869249662 Mesorhizobium sp. M7A.F.Ca.CA.001.16.1.1 Isolate Nodule
159 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
160 2869264136 Mesorhizobium sp. M7A.F.Ca.CA.001.15.1.1 Isolate Nodule
161 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
162 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
163 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
164 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
165 2871459585 Mesorhizobium sp. M7A.F.Ca.CA.001.09.1.1 Isolate Nodule
166 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
167 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
168 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
169 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
170 2874131515 Mesorhizobium sp. M7A.F.Ca.CA.001.05.1.1 Isolate Nodule
171 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
172 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
173 2874162495 Mesorhizobium sp. M7A.F.Ca.CA.002.11.2.1 Isolate Nodule
174 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
175 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
176 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
177 2876399893 Mesorhizobium sp. M7A.F.Ca.AU.002.03.1.1 Isolate Nodule
178 2876406927 Mesorhizobium sp. M7A.F.Ca.CA.002.03.2.1 Isolate Nodule
179 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
180 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
181 2878730984 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.1 Isolate Nodule
182 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
183 2878774303 Mesorhizobium sp. M7A.F.Ca.CA.002.15.1.1 Isolate Nodule
184 2878781027 Mesorhizobium sp. M7A.F.Ca.CA.001.12.2.1 Isolate Nodule
185 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
186 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
187 2903513507 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.2 Isolate Nodule
188 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
189 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
190 2906363423 Mesorhizobium sp. M7A.F.Ca.CA.001.14.1.1 Isolate Nodule
191 2906370794 Mesorhizobium sp. M7A.F.Ca.CA.001.13.1.1 Isolate Nodule
192 2906386501 Mesorhizobium sp. M7A.F.Ca.CA.003.01.2.1 Isolate Nodule
193 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
194 2906408224 Mesorhizobium sp. M7A.F.Ca.CA.002.03.1.1 Isolate Nodule
195 2906427513 Mesorhizobium sp. M7A.F.Ca.CA.004.05.1.1 Isolate Nodule
196 2922151315 Mesorhizobium sp. M7A.F.Ca.US.007.01.2.1 Isolate Nodule
197 2922172374 Mesorhizobium sp. M7A.F.Ca.CA.002.06.1.1 Isolate Nodule
198 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
199 2924741084 Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 Isolate Nodule
200 2924748358 Mesorhizobium sp. M7A.F.Ca.CA.002.14.1.2 Isolate Nodule
201 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
202 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
203 2937861824 Mesorhizobium sp. M7A.F.Ca.CA.001.07.2.1 Isolate Nodule
204 2937868953 Mesorhizobium sp. M7A.F.Ca.CA.001.13.2.1 Isolate Nodule
205 2937980651 Mesorhizobium sp. M7A.F.Ca.CA.004.04.2.1 Isolate Nodule
206 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
207 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
208 2958122699 Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 Isolate Nodule
209 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
210 2958158011 Mesorhizobium sp. M7A.F.Ca.CA.002.15.2.1 Isolate Nodule
211 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
212 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
213 2961136820 Mesorhizobium sp. M7A.F.Ca.AU.001.01.1.1 Isolate Nodule
214 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
215 2965025482 Mesorhizobium sp. Primo-A Isolate Nodule
216 2965032056 Mesorhizobium sp. M7A.F.Ca.US.006.04.2.1 Isolate Nodule
217 2965040258 Mesorhizobium sp. M7A.F.Ca.CA.001.06.1.1 Isolate Nodule
218 2965047637 Mesorhizobium sp. M7A.F.Ca.US.014.04.1.1 Isolate Nodule
219 2965089291 Mesorhizobium sp. M7A.F.Ca.CA.001.04.1.1 Isolate Nodule
220 2965102966 Mesorhizobium sp. M7A.F.Ca.AU.002.02.1.1 Isolate Nodule
221 2965110997 Mesorhizobium sp. M7A.F.Ca.US.003.02.2.1 Isolate Nodule
222 2968138860 Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1 Isolate Nodule
223 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
224 2970532167 Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 Isolate Nodule
225 2970547951 Mesorhizobium sp. M7A.F.Ca.AU.002.04.1.1 Isolate Nodule
226 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
227 2970627176 Mesorhizobium sp. M7A.F.Ca.US.006.01.2.1 Isolate Nodule
228 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
229 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
230 2977872689 Mesorhizobium sp. M7A.F.Ca.US.001.04.1.1 Isolate Nodule
231 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
232 2977907340 Mesorhizobium sp. M7A.F.Ca.CA.004.12.1.1 Isolate Nodule
233 2977915119 Mesorhizobium sp. M7A.F.Ca.CA.001.09.2.1 Isolate Nodule
234 2977935797 Mesorhizobium sp. M7A.F.Ca.CA.002.12.1.1 Isolate Nodule
235 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
236 2977950692 Mesorhizobium sp. M7A.F.Ca.CA.001.04.2.1 Isolate Nodule
237 2977957713 Mesorhizobium sp. M7A.F.Ca.US.001.02.1.1 Isolate Nodule
238 2979764755 Mesorhizobium sp. M7A.F.Ca.CA.004.05.2.1 Isolate Nodule
239 2979772303 Mesorhizobium sp. M7A.F.Ca.CA.004.04.1.1 Isolate Nodule
240 2979793036 Mesorhizobium sp. M7A.F.Ca.US.007.01.1.1 Isolate Nodule
241 2987673487 Mesorhizobium sp. M7A.F.Ca.US.003.02.1.1 Isolate Nodule
242 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
243 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
244 3004195979 Mesorhizobium sp. M7A.F.Ca.CA.001.08.2.1 Isolate Nodule
245 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
246 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
247 3004239961 Mesorhizobium sp. M7A.F.Ca.US.005.03.2.1 Isolate Nodule
248 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
249 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
250 8004300914 Mesorhizobium sp. M7A.F.Ca.CA.002.07.1.1 Isolate Nodule
251 8004312739 Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 Isolate Nodule
252 8004361976 Mesorhizobium sp. M7A.F.Ca.CA.001.08.1.1 Isolate Nodule
253 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
254 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
255 8004695233 Mesorhizobium sp. M7A.F.Ca.US.001.01.1.1 Isolate Nodule
256 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
257 8004727605 Mesorhizobium sp. M7A.F.Ca.CA.004.01.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 60.21
Metatranscriptomes 0
Isolates 39.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.46
Nodule 37.02
Rhizoplane 3.11
Rhizosphere 51.56
Stem 0
Stem Tuber 0
Unclassified 1.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307407_10102160 3300031903 Bacteria 1782
2 rootL2_10199010 3300003322 Bacteria 1475
3 Ga0070658_10066731 3300005327 Unclassified 2939
4 Ga0070676_10188145 3300005328 Bacteria 1346
5 Ga0068869_100009753 3300005334 Bacteria 6236
6 Ga0068869_100504030 3300005334 Bacteria 1011
7 Ga0070682_100175335 3300005337 Bacteria 1493
8 Ga0070669_100520010 3300005353 Bacteria 989
9 Ga0070671_100050125 3300005355 Bacteria 3473
10 Ga0070674_100187200 3300005356 Bacteria 1590
11 Ga0070674_100224182 3300005356 Bacteria 1464
12 Ga0070673_100270533 3300005364 Bacteria 1487
13 Ga0070700_100066657 3300005441 Bacteria 2286
14 Ga0070678_100695207 3300005456 Bacteria 916
15 Ga0068867_100094626 3300005459 Bacteria 2272
16 Ga0068853_100008585 3300005539 Bacteria 8214
17 Ga0070686_100386939 3300005544 Unclassified 1060
18 Ga0070665_100059341 3300005548 Bacteria 3835
19 Ga0068856_100755564 3300005614 Bacteria 992
20 Ga0070702_100084394 3300005615 Bacteria 1910
21 Ga0068859_100006120 3300005617 Bacteria 12223
22 Ga0068863_100078802 3300005841 Bacteria 3120
23 Ga0068863_100474412 3300005841 Bacteria 1230
24 Ga0068858_100016592 3300005842 Bacteria 6918
25 Ga0068858_100532850 3300005842 Bacteria 1136
26 Ga0081538_10004441 3300005981 Bacteria 12931
27 Ga0081538_10006807 3300005981 Bacteria 9976
28 Ga0081540_1001305 3300005983 Bacteria 21757
29 Ga0081540_1111957 3300005983 Bacteria 1151
30 Ga0075365_10099166 3300006038 Bacteria 1993
31 Ga0075364_10140733 3300006051 Bacteria 1623
32 Ga0070716_100317702 3300006173 Bacteria 1090
33 Ga0075362_10062846 3300006177 Bacteria 1683
34 Ga0075367_10248358 3300006178 Bacteria 1116
35 Ga0075366_10047470 3300006195 Bacteria 2545
36 Ga0075366_10051239 3300006195 Bacteria 2452
37 Ga0097621_100006633 3300006237 Bacteria 8226
38 Ga0075370_10105598 3300006353 Bacteria 1633
39 Ga0068871_100064910 3300006358 Bacteria 2989
40 Ga0075428_100055407 3300006844 Bacteria 4344
41 Ga0075428_100251260 3300006844 Bacteria 1906
42 Ga0075428_100287373 3300006844 Bacteria 1769
43 Ga0075430_100008692 3300006846 Bacteria 8569
44 Ga0075431_100226957 3300006847 Bacteria 1904
45 Ga0097620_100006120 3300006931 Bacteria 12223
46 Ga0075435_100276883 3300007076 Bacteria 1432
47 Ga0105240_10020762 3300009093 Bacteria 8750
48 Ga0105240_10131221 3300009093 Bacteria 3005
49 Ga0111539_10082204 3300009094 Bacteria 3788
50 Ga0105245_10035262 3300009098 Bacteria 4439
51 Ga0105247_10466489 3300009101 Bacteria 913
52 Ga0114129_10013696 3300009147 Bacteria 11556
53 Ga0105243_10134843 3300009148 Bacteria 2099
54 Ga0105241_10094562 3300009174 Bacteria 2364
55 Ga0105241_10654158 3300009174 Unclassified 955
56 Ga0105248_10008221 3300009177 Bacteria 11464
57 Ga0105237_10099983 3300009545 Bacteria 2891
58 Ga0105237_10176552 3300009545 Bacteria 2136
59 Ga0105238_10017666 3300009551 Bacteria 7250
60 Ga0105239_10040073 3300010375 Bacteria 5132
61 Ga0105239_10153873 3300010375 Bacteria 2567
62 Ga0105239_10159761 3300010375 Bacteria 2517
63 Ga0105246_10011090 3300011119 Bacteria 5583
64 Ga0105246_10171368 3300011119 Bacteria 1663
65 Ga0157369_10780006 3300013105 Bacteria 982
66 Ga0157374_10111425 3300013296 Bacteria 2633
67 Ga0157378_10011219 3300013297 Bacteria 7840
68 Ga0157378_10948080 3300013297 Bacteria 893
69 Ga0157375_10015141 3300013308 Bacteria 6898
70 Ga0157375_10032175 3300013308 Bacteria 4972
71 Ga0157375_10083312 3300013308 Bacteria 3243
72 Ga0163163_10100269 3300014325 Bacteria 2918
73 Ga0157380_10668347 3300014326 Bacteria 1039
74 Ga0163161_10016854 3300017792 Bacteria 5106
75 Ga0207642_10024863 3300025899 Bacteria 2414
76 Ga0207680_10027879 3300025903 Bacteria 3153
77 Ga0207645_10318617 3300025907 Bacteria 1037
78 Ga0207671_10015371 3300025914 Bacteria 5995
79 Ga0207694_10006711 3300025924 Bacteria 8746
80 Ga0207669_10363988 3300025937 Bacteria 1122
81 Ga0207704_10456111 3300025938 Bacteria 1021
82 Ga0207711_10013758 3300025941 Bacteria 6718
83 Ga0207689_10001266 3300025942 Bacteria 24364
84 Ga0207668_10226124 3300025972 Bacteria 1506
85 Ga0207640_10383384 3300025981 Bacteria 1140
86 Ga0207677_10680439 3300026023 Bacteria 911
87 Ga0207708_10080621 3300026075 Bacteria 2501
88 Ga0207648_10073950 3300026089 Bacteria 2970
89 Ga0207648_10200415 3300026089 Bacteria 1770
90 Ga0207675_100115707 3300026118 Bacteria 2534
91 Ga0207428_10227422 3300027907 Bacteria 1397
92 Ga0268266_10551955 3300028379 Bacteria 1104
93 Ga0268265_10602038 3300028380 Bacteria 1050
94 Ga0268264_10173441 3300028381 Bacteria 1952
95 Ga0307515_10001910 3300028794 Bacteria 46279
96 Ga0307515_10334779 3300028794 Bacteria 1170
97 Ga0307513_10033611 3300031456 Bacteria 5763
98 Ga0307513_10358029 3300031456 Bacteria 1205
99 Ga0307514_10001002 3300031649 Bacteria 41404
100 Ga0307405_10287660 3300031731 Bacteria 1241
101 Ga0307413_10555689 3300031824 Bacteria 932
102 Ga0307406_10085138 3300031901 Bacteria 2113
103 Ga0307409_100069696 3300031995 Bacteria 2788
104 Ga0307416_100092341 3300032002 Bacteria 2603
105 Ga0307416_100718777 3300032002 Bacteria 1089
106 Ga0307415_100054476 3300032126 Bacteria 2731
107 Ga0307415_100569877 3300032126 Bacteria 1002
108 Ga0373928_0018575 3300035084 Bacteria 1442
109 Ga0373962_0122824 3300035242 Bacteria 829
110 Ga0373947_0001182 3300035725 Bacteria 16056
111 Ga0373937_0048190 3300036401 Bacteria 3900
112 Ga0373925_0403989 3300037068 Bacteria 1114
113 Ga0395900_0577045 3300037418 Bacteria 1067
114 Ga0395898_0084041 3300037466 Bacteria 3068
115 Ga0395901_0021273 3300038443 Bacteria 6644
116 Ga0395901_0564562 3300038443 Bacteria 1152
117 Ga0451797_1436464 3300041453 Bacteria 818
118 Ga0466967_0418630 3300045976 Bacteria 1305
119 Ga0466967_0443471 3300045976 Bacteria 1268
120 Ga0495603_0001634 3300046455 Bacteria 13163
121 Ga0495629_0005055 3300046459 Bacteria 9869
122 Ga0495638_0005273 3300046460 Bacteria 9658
123 Ga0495641_0055607 3300046461 Bacteria 1796
124 Ga0495580_0000261 3300046472 Bacteria 42129
125 Ga0495582_0003344 3300046473 Bacteria 9016
126 Ga0495639_0000674 3300046475 Bacteria 15701
127 Ga0495594_0000284 3300046499 Bacteria 24943
128 Ga0495665_0169843 3300046531 Bacteria 1135
129 Ga0495622_0001640 3300046557 Bacteria 11058
130 Ga0495656_0033216 3300046615 Bacteria 2105
131 Ga0495668_0143030 3300046616 Bacteria 1309
132 Ga0495634_0008006 3300046642 Bacteria 7886
133 Ga0495647_0058219 3300046681 Bacteria 1518
134 Ga0495658_0002337 3300046683 Bacteria 9579
135 Ga0495613_0002982 3300046689 Bacteria 12680
136 Ga0495581_0000681 3300047315 Bacteria 17825
137 Ga0495676_0052660 3300047321 Bacteria 3247
138 Ga0495593_0001401 3300047673 Bacteria 14104
139 Ga0495614_0002874 3300048089 Bacteria 7661
140 Ga0496104_0025307 3300048907 Bacteria 5471
141 Ga0496106_0103279 3300048909 Bacteria 2212
142 Ga0496106_0653634 3300048909 Bacteria 840
143 Ga0496110_0328281 3300048913 Bacteria 1394
144 Ga0496112_0073255 3300048915 Bacteria 3386
145 Ga0496113_0203596 3300048916 Bacteria 1574
146 Ga0496114_0776068 3300048917 Bacteria 836
147 Ga0496126_0250164 3300048929 Bacteria 1477
148 Ga0496126_0479895 3300048929 Bacteria 996
149 Ga0501290_001084 3300049513 Bacteria 3884
150 Ga0501300_000011 3300049523 Bacteria 29616
151 Ga0501034_0028661 3300049571 Bacteria 5665
152 Ga0501036_0178194 3300049572 Bacteria 1790
153 Ga0501039_0078292 3300049575 Bacteria 2572
154 Ga0501041_0022365 3300049577 Bacteria 3785
155 Ga0501048_0035914 3300049582 Bacteria 3565
156 Ga0501067_0004478 3300049583 Bacteria 7707
157 Ga0501069_0009622 3300049585 Bacteria 5103
158 Ga0501223_000551 3300049663 Bacteria 9040
159 nmdc:mga07m45_41157_c1 3300050496 Bacteria 2587
160 nmdc:mga05p37_2914_c1 3300050507 Bacteria 19858
161 nmdc:mga05p37_339585_c1 3300050507 Bacteria 1771
162 nmdc:mga0qj67_64111_c1 3300050509 Bacteria 2922
163 nmdc:mga08y16_121553_c1 3300050511 Bacteria 2717
164 nmdc:mga08y16_171414_c1 3300050511 Bacteria 2254
165 nmdc:mga08y16_248667_c1 3300050511 Bacteria 1837
166 nmdc:mga0n895_116669_c1 3300050512 Bacteria 2688
167 nmdc:mga0rr50_266657_c1 3300050513 Bacteria 1426
168 Ga0495655_0014688 3300053083 Bacteria 1648
169 Ga0495655_0045213 3300053083 Bacteria 1143
170 Ga0495619_0008166 3300053085 Bacteria 6623
171 Ga0495619_0380169 3300053085 Bacteria 976
172 Ga0500616_0111567 3300053153 Bacteria 1320
173 Ga0500627_0097743 3300053158 Bacteria 1317
174 Ga0501082_0352158 3300060353 Bacteria 1284
175 2509368457 2509276018 Bacteria 6910194
176 2510314739 2510065059 Bacteria 6847884
177 2671693339 2671180139 Bacteria 4196045
178 2688595711 2687453392 Bacteria 6880454
179 2739248927 2738543013 Bacteria 5618633
180 2770196376 2767802442 Bacteria 5747986
181 2841736133 2841734538 Bacteria 6784580
182 2844010518 2844009547 Bacteria 6728125
183 2856332802 2856328259 Bacteria 6528202
184 2856335778 2856334872 Bacteria 7037011
185 2856370136 2856364286 Bacteria 6939991
186 2857369479 2857367948 Bacteria 6965560
187 2869175573 2869169390 Bacteria 6659796
188 2869236347 2869234852 Bacteria 6654993
189 2869243535 2869242130 Bacteria 6609239
190 2869255201 2869249662 Bacteria 6868783
191 2869258069 2869256925 Bacteria 6981691
192 2869269950 2869264136 Bacteria 6880765
193 2869290932 2869285874 Bacteria 6901219
194 2871433214 2871429161 Bacteria 6547891
195 2871439572 2871435913 Bacteria 6880295
196 2871453403 2871451962 Bacteria 7336357
197 2871466077 2871459585 Bacteria 6866887
198 2871476437 2871474448 Bacteria 6806570
199 2871486591 2871481445 Bacteria 6700002
200 2874109700 2874109183 Bacteria 6517025
201 2874120364 2874116593 Bacteria 6674494
202 2874133524 2874131515 Bacteria 6820270
203 2874153625 2874146452 Bacteria 7533118
204 2874160890 2874155637 Bacteria 6724144
205 2874168424 2874162495 Bacteria 6174670
206 2874172120 2874168670 Bacteria 8062617
207 2876372644 2876369609 Bacteria 6807521
208 2876387912 2876386047 Bacteria 6698674
209 2876400444 2876399893 Bacteria 6927900
210 2876412681 2876406927 Bacteria 6191900
211 2876418930 2876413966 Bacteria 6831344
212 2876421453 2876420981 Bacteria 6687741
213 2878735334 2878730984 Bacteria 6380721
214 2878750827 2878745973 Bacteria 6867388
215 2878774644 2878774303 Bacteria 6108671
216 2878785221 2878781027 Bacteria 6834456
217 2894657285 2894652903 Bacteria 4587256
218 2903501483 2903492973 Bacteria 13473544
219 2903514558 2903513507 Bacteria 6344008
220 2906313752 2906308376 Bacteria 6841989
221 2906326461 2906321335 Bacteria 6579571
222 2906369169 2906363423 Bacteria 6856682
223 2906374081 2906370794 Bacteria 6881062
224 2906386751 2906386501 Bacteria 5977019
225 2906404299 2906401398 Bacteria 6693206
226 2906409372 2906408224 Bacteria 6162342
227 2906434950 2906427513 Bacteria 6375796
228 2922153435 2922151315 Bacteria 6902399
229 2922176577 2922172374 Bacteria 6167644
230 2924715767 2924710171 Bacteria 6752351
231 2924747918 2924741084 Bacteria 6661321
232 2924750461 2924748358 Bacteria 6154725
233 2937819943 2937813078 Bacteria 7783518
234 2937836634 2937836603 Bacteria 6811263
235 2937864307 2937861824 Bacteria 6660327
236 2937869094 2937868953 Bacteria 6639878
237 2937980813 2937980651 Bacteria 6517427
238 2958044950 2958041894 Bacteria 13082850
239 2958109778 2958108152 Bacteria 6681128
240 2958129010 2958122699 Bacteria 7280457
241 2958135332 2958130278 Bacteria 6897202
242 2958160888 2958158011 Bacteria 6058449
243 2958184361 2958179912 Bacteria 6874908
244 2961082416 2961077736 Bacteria 7079850
245 2961141342 2961136820 Bacteria 6775228
246 2961184312 2961183825 Bacteria 6688536
247 2965030250 2965025482 Bacteria 6532201
248 2965032340 2965032056 Bacteria 6887443
249 2965043491 2965040258 Bacteria 6855979
250 2965051425 2965047637 Bacteria 6623551
251 2965094528 2965089291 Bacteria 6866420
252 2965107371 2965102966 Bacteria 6800987
253 2965118346 2965110997 Bacteria 6693150
254 2968144871 2968138860 Bacteria 6605449
255 2970517478 2970510686 Bacteria 7006402
256 2970538921 2970532167 Bacteria 6553173
257 2970552179 2970547951 Bacteria 6931819
258 2970626744 2970619444 Bacteria 6986144
259 2970634063 2970627176 Bacteria 6680862
260 2977850513 2977843712 Bacteria 6753583
261 2977857447 2977851361 Bacteria 6694324
262 2977875367 2977872689 Bacteria 7270173
263 2977906095 2977898635 Bacteria 6675551
264 2977911215 2977907340 Bacteria 6577984
265 2977919943 2977915119 Bacteria 6829656
266 2977939182 2977935797 Bacteria 6252826
267 2977944203 2977942078 Bacteria 7570577
268 2977950980 2977950692 Bacteria 6893264
269 2977958204 2977957713 Bacteria 6877875
270 2979768636 2979764755 Bacteria 6610066
271 2979777269 2979772303 Bacteria 6618277
272 2979798039 2979793036 Bacteria 6808957
273 2987679590 2987673487 Bacteria 6884027
274 2996387603 2996386984 Bacteria 6978667
275 3000142518 3000135777 Bacteria 6891109
276 3004200970 3004195979 Bacteria 6776956
277 3004210079 3004203850 Bacteria 7307914
278 3004237551 3004232784 Bacteria 6662140
279 3004246087 3004239961 Bacteria 6892290
280 3004255798 3004248173 Bacteria 6563236
281 649870280 649633066 Bacteria 6690028
282 8004300992 8004300914 Bacteria 6132239
283 8004313958 8004312739 Bacteria 7444653
284 8004364399 8004361976 Bacteria 6858373
285 8004393221 8004387939 Bacteria 7049250
286 8004644182 8004640170 Bacteria 6723001
287 8004696168 8004695233 Bacteria 6731676
288 8004720008 8004714634 Bacteria 6776161
289 8004730331 8004727605 Bacteria 6643904
290 Ga0307407_10102160
291 rootL2_10199010
292 Ga0070658_10066731
293 Ga0070676_10188145
294 Ga0068869_100009753
295 Ga0068869_100504030
296 Ga0070682_100175335
297 Ga0070669_100520010
298 Ga0070671_100050125
299 Ga0070674_100187200
300 Ga0070674_100224182
301 Ga0070673_100270533
302 Ga0070700_100066657
303 Ga0070678_100695207
304 Ga0068867_100094626
305 Ga0068853_100008585
306 Ga0070686_100386939
307 Ga0070665_100059341
308 Ga0068856_100755564
309 Ga0070702_100084394
310 Ga0068859_100006120
311 Ga0068863_100078802
312 Ga0068863_100474412
313 Ga0068858_100016592
314 Ga0068858_100532850
315 Ga0081538_10004441
316 Ga0081538_10006807
317 Ga0081540_1001305
318 Ga0081540_1111957
319 Ga0075365_10099166
320 Ga0075364_10140733
321 Ga0070716_100317702
322 Ga0075362_10062846
323 Ga0075367_10248358
324 Ga0075366_10047470
325 Ga0075366_10051239
326 Ga0097621_100006633
327 Ga0075370_10105598
328 Ga0068871_100064910
329 Ga0075428_100055407
330 Ga0075428_100251260
331 Ga0075428_100287373
332 Ga0075430_100008692
333 Ga0075431_100226957
334 Ga0097620_100006120
335 Ga0075435_100276883
336 Ga0105240_10020762
337 Ga0105240_10131221
338 Ga0111539_10082204
339 Ga0105245_10035262
340 Ga0105247_10466489
341 Ga0114129_10013696
342 Ga0105243_10134843
343 Ga0105241_10094562
344 Ga0105241_10654158
345 Ga0105248_10008221
346 Ga0105237_10099983
347 Ga0105237_10176552
348 Ga0105238_10017666
349 Ga0105239_10040073
350 Ga0105239_10153873
351 Ga0105239_10159761
352 Ga0105246_10011090
353 Ga0105246_10171368
354 Ga0157369_10780006
355 Ga0157374_10111425
356 Ga0157378_10011219
357 Ga0157378_10948080
358 Ga0157375_10015141
359 Ga0157375_10032175
360 Ga0157375_10083312
361 Ga0163163_10100269
362 Ga0157380_10668347
363 Ga0163161_10016854
364 Ga0207642_10024863
365 Ga0207680_10027879
366 Ga0207645_10318617
367 Ga0207671_10015371
368 Ga0207694_10006711
369 Ga0207669_10363988
370 Ga0207704_10456111
371 Ga0207711_10013758
372 Ga0207689_10001266
373 Ga0207668_10226124
374 Ga0207640_10383384
375 Ga0207677_10680439
376 Ga0207708_10080621
377 Ga0207648_10073950
378 Ga0207648_10200415
379 Ga0207675_100115707
380 Ga0207428_10227422
381 Ga0268266_10551955
382 Ga0268265_10602038
383 Ga0268264_10173441
384 Ga0307515_10001910
385 Ga0307515_10334779
386 Ga0307513_10033611
387 Ga0307513_10358029
388 Ga0307514_10001002
389 Ga0307405_10287660
390 Ga0307413_10555689
391 Ga0307406_10085138
392 Ga0307409_100069696
393 Ga0307416_100092341
394 Ga0307416_100718777
395 Ga0307415_100054476
396 Ga0307415_100569877
397 Ga0373928_0018575
398 Ga0373962_0122824
399 Ga0373947_0001182
400 Ga0373937_0048190
401 Ga0373925_0403989
402 Ga0395900_0577045
403 Ga0395898_0084041
404 Ga0395901_0021273
405 Ga0395901_0564562
406 Ga0451797_1436464
407 Ga0466967_0418630
408 Ga0466967_0443471
409 Ga0495603_0001634
410 Ga0495629_0005055
411 Ga0495638_0005273
412 Ga0495641_0055607
413 Ga0495580_0000261
414 Ga0495582_0003344
415 Ga0495639_0000674
416 Ga0495594_0000284
417 Ga0495665_0169843
418 Ga0495622_0001640
419 Ga0495656_0033216
420 Ga0495668_0143030
421 Ga0495634_0008006
422 Ga0495647_0058219
423 Ga0495658_0002337
424 Ga0495613_0002982
425 Ga0495581_0000681
426 Ga0495676_0052660
427 Ga0495593_0001401
428 Ga0495614_0002874
429 Ga0496104_0025307
430 Ga0496106_0103279
431 Ga0496106_0653634
432 Ga0496110_0328281
433 Ga0496112_0073255
434 Ga0496113_0203596
435 Ga0496114_0776068
436 Ga0496126_0250164
437 Ga0496126_0479895
438 Ga0501290_001084
439 Ga0501300_000011
440 Ga0501034_0028661
441 Ga0501036_0178194
442 Ga0501039_0078292
443 Ga0501041_0022365
444 Ga0501048_0035914
445 Ga0501067_0004478
446 Ga0501069_0009622
447 Ga0501223_000551
448 nmdc:mga07m45_41157_c1
449 nmdc:mga05p37_2914_c1
450 nmdc:mga05p37_339585_c1
451 nmdc:mga0qj67_64111_c1
452 nmdc:mga08y16_121553_c1
453 nmdc:mga08y16_171414_c1
454 nmdc:mga08y16_248667_c1
455 nmdc:mga0n895_116669_c1
456 nmdc:mga0rr50_266657_c1
457 Ga0495655_0014688
458 Ga0495655_0045213
459 Ga0495619_0008166
460 Ga0495619_0380169
461 Ga0500616_0111567
462 Ga0500627_0097743
463 Ga0501082_0352158
464 2509368457
465 2510314739
466 2671693339
467 2688595711
468 2739248927
469 2770196376
470 2841736133
471 2844010518
472 2856332802
473 2856335778
474 2856370136
475 2857369479
476 2869175573
477 2869236347
478 2869243535
479 2869255201
480 2869258069
481 2869269950
482 2869290932
483 2871433214
484 2871439572
485 2871453403
486 2871466077
487 2871476437
488 2871486591
489 2874109700
490 2874120364
491 2874133524
492 2874153625
493 2874160890
494 2874168424
495 2874172120
496 2876372644
497 2876387912
498 2876400444
499 2876412681
500 2876418930
501 2876421453
502 2878735334
503 2878750827
504 2878774644
505 2878785221
506 2894657285
507 2903501483
508 2903514558
509 2906313752
510 2906326461
511 2906369169
512 2906374081
513 2906386751
514 2906404299
515 2906409372
516 2906434950
517 2922153435
518 2922176577
519 2924715767
520 2924747918
521 2924750461
522 2937819943
523 2937836634
524 2937864307
525 2937869094
526 2937980813
527 2958044950
528 2958109778
529 2958129010
530 2958135332
531 2958160888
532 2958184361
533 2961082416
534 2961141342
535 2961184312
536 2965030250
537 2965032340
538 2965043491
539 2965051425
540 2965094528
541 2965107371
542 2965118346
543 2968144871
544 2970517478
545 2970538921
546 2970552179
547 2970626744
548 2970634063
549 2977850513
550 2977857447
551 2977875367
552 2977906095
553 2977911215
554 2977919943
555 2977939182
556 2977944203
557 2977950980
558 2977958204
559 2979768636
560 2979777269
561 2979798039
562 2987679590
563 2996387603
564 3000142518
565 3004200970
566 3004210079
567 3004237551
568 3004246087
569 3004255798
570 649870280
571 8004300992
572 8004313958
573 8004364399
574 8004393221
575 8004644182
576 8004696168
577 8004720008
578 8004730331

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

131

207

0.88

PF00970

FAD_binding_6

Oxidoreductase FAD-binding domain

23

120

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tnv-assembly1.cif.gz_A crystal structure of human nadh-cytochrome b5 reductase t117s mutant 0.8684 11 246
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8579 13 250
5ogx-assembly1.cif.gz_A crystal structure of amycolatopsis cytochrome p450 reductase gcob. 0.8552 11 247
1gvh-assembly1.cif.gz_A the x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket 0.8545 11 250
6o0a-assembly1.cif.gz_A crystal structure of flavohemoglobin from malassezia yamatoensis with bound fad and heme determined by iron sad phasing 0.852 12 249
ID Description Score Start End Superfamily
af_P76254_2_105_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9114 9 106 2.40.30.10
1gvhA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9062 11 111 2.40.30.10
1a8pA01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8977 12 102 2.40.30.10
af_Q2G2P2_146_251_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8913 11 108 2.40.30.10
1fdrA01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8861 11 102 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A528V5X5-F1-model_v4 Oxidoreductase 0.9756 103 217 GO:0016020
GO:0016491
AF-A0A5C7JRT1-F1-model_v4 deleted 0.9695 10 250
AF-B8IK14-F1-model_v4 Oxidoreductase FAD-binding domain protein 0.9676 9 250 GO:0016491
GO:0051537
AF-A0A7Y6CKD3-F1-model_v4 deleted 0.9639 10 186
AF-H0I362-F1-model_v4 Oxidoreductase FAD-binding domain-containing protein 0.9636 11 250 GO:0016491
GO:0051537

Map