F388983

General Info

Members Datasets Scaffolds Average Seq Length
289 190 578 246

Family's Representative Sequence

Representative Sequence 3300005293|Ga0065715_10196119|Ga0065715_101961191
Length 282
Sequence LSALLTARGAPPPLALARRLRASLGPQALSPFVIIYGINPVLEALRRGCVRKLRVGPRRDRRIDEALTIAREKHVTIERADADTIDRLARGGVHQGIVAELDVPRDYSLPELVEGAAPAAPLLVVLDGIEDPHNVGAILRTVDAAGAHGVVRQARHAAALDGIAAKASAGAVALVRIATEVNIARALEELKDLNVWTIGLAGDAADTYEAIDFTLPTAIVLGAEGTGLRRLVRERCDRLVSIPMHGGVGSLNVSVAAGVVLFEAARQRKNEQGARENGKGKD

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
118 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
119 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
120 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
128 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
129 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
130 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
131 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
132 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
133 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
134 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
135 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.19
Nodule 0
Rhizoplane 3.81
Rhizosphere 90.66
Stem 0
Stem Tuber 0
Unclassified 5.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10196119 3300005293 Bacteria 1358
2 Ga0065704_10076171 3300005289 Bacteria 5228
3 Ga0065712_10080202 3300005290 Bacteria 3133
4 Ga0065715_10097461 3300005293 Bacteria 3699
5 Ga0065715_10252408 3300005293 Bacteria 1163
6 Ga0065707_10000901 3300005295 Bacteria 9894
7 Ga0065707_10135439 3300005295 Bacteria 1849
8 Ga0070676_10036262 3300005328 Bacteria 2840
9 Ga0070683_100000094 3300005329 Bacteria 58242
10 Ga0070690_100082069 3300005330 Bacteria 2110
11 Ga0070690_100429745 3300005330 Unclassified 975
12 Ga0070670_100006978 3300005331 Bacteria 9574
13 Ga0070670_100018452 3300005331 Bacteria 5986
14 Ga0070670_100027710 3300005331 Bacteria 4873
15 Ga0070691_10100371 3300005341 Unclassified 1437
16 Ga0070687_100029676 3300005343 Bacteria 2665
17 Ga0070661_100438416 3300005344 Bacteria 1038
18 Ga0070668_100321650 3300005347 Bacteria 1302
19 Ga0070669_100001822 3300005353 Bacteria 15344
20 Ga0070669_100167625 3300005353 Bacteria 1710
21 Ga0070675_100199188 3300005354 Bacteria 1738
22 Ga0070675_100318970 3300005354 Bacteria 1372
23 Ga0070675_100465441 3300005354 Bacteria 1135
24 Ga0070673_100193218 3300005364 Bacteria 1749
25 Ga0070673_100302525 3300005364 Bacteria 1408
26 Ga0070688_100145246 3300005365 Bacteria 1616
27 Ga0070688_100168254 3300005365 Bacteria 1510
28 Ga0070659_100159877 3300005366 Bacteria 1841
29 Ga0070667_100048553 3300005367 Bacteria 3573
30 Ga0070713_100169230 3300005436 Bacteria 1956
31 Ga0070700_100033404 3300005441 Bacteria 3098
32 Ga0070700_100324738 3300005441 Bacteria 1132
33 Ga0070694_100243042 3300005444 Bacteria 1358
34 Ga0070708_100001086 3300005445 Bacteria 20783
35 Ga0070662_100127411 3300005457 Bacteria 1958
36 Ga0070681_10162458 3300005458 Bacteria 2157
37 Ga0070706_100001206 3300005467 Bacteria 27672
38 Ga0070707_100162340 3300005468 Bacteria 2177
39 Ga0070698_100085660 3300005471 Bacteria 3137
40 Ga0070699_100024274 3300005518 Bacteria 5224
41 Ga0070699_100283321 3300005518 Bacteria 1485
42 Ga0070679_100117748 3300005530 Bacteria 2641
43 Ga0070684_100006365 3300005535 Bacteria 9130
44 Ga0070686_100067617 3300005544 Bacteria 2328
45 Ga0070686_100075544 3300005544 Bacteria 2217
46 Ga0070695_100011528 3300005545 Bacteria 5287
47 Ga0070696_100203071 3300005546 Bacteria 1481
48 Ga0070693_100038797 3300005547 Bacteria 2665
49 Ga0070693_100361919 3300005547 Unclassified 996
50 Ga0070704_100272747 3300005549 Bacteria 1398
51 Ga0070664_100000479 3300005564 Bacteria 30222
52 Ga0070664_100144563 3300005564 Bacteria 2096
53 Ga0068857_100014764 3300005577 Bacteria 6815
54 Ga0068854_100026719 3300005578 Bacteria 3970
55 Ga0068856_100506951 3300005614 Bacteria 1228
56 Ga0070702_100047742 3300005615 Bacteria 2433
57 Ga0070702_100177595 3300005615 Bacteria 1390
58 Ga0068852_100320797 3300005616 Bacteria 1504
59 Ga0068859_100112752 3300005617 Bacteria 2782
60 Ga0068859_100199093 3300005617 Bacteria 2087
61 Ga0068859_100412590 3300005617 Bacteria 1446
62 Ga0068851_10072936 3300005834 Bacteria 1779
63 Ga0068863_100172218 3300005841 Bacteria 2077
64 Ga0068860_100032141 3300005843 Bacteria 5045
65 Ga0068860_100134881 3300005843 Bacteria 2370
66 Ga0068862_100133312 3300005844 Bacteria 2199
67 Ga0070717_10060804 3300006028 Bacteria 3129
68 Ga0075368_10090104 3300006042 Unclassified 1254
69 Ga0075364_10025764 3300006051 Bacteria 3746
70 Ga0075364_10093379 3300006051 Bacteria 1998
71 Ga0075362_10003471 3300006177 Bacteria 5519
72 Ga0075366_10134404 3300006195 Bacteria 1493
73 Ga0097621_100192545 3300006237 Bacteria 1767
74 Ga0075428_100005429 3300006844 Bacteria 14163
75 Ga0075428_100224919 3300006844 Bacteria 2026
76 Ga0075428_100429460 3300006844 Bacteria 1415
77 Ga0075430_100006929 3300006846 Bacteria 9552
78 Ga0075430_100395402 3300006846 Bacteria 1141
79 Ga0075430_100502177 3300006846 Bacteria 1001
80 Ga0075431_100010222 3300006847 Bacteria 9436
81 Ga0075431_100030556 3300006847 Bacteria 5550
82 Ga0075431_100041683 3300006847 Bacteria 4734
83 Ga0075431_100738139 3300006847 Bacteria 960
84 Ga0075433_10030452 3300006852 Bacteria 4604
85 Ga0075434_100008089 3300006871 Bacteria 9751
86 Ga0075434_100144336 3300006871 Bacteria 2401
87 Ga0075434_100202820 3300006871 Bacteria 2003
88 Ga0075434_100224985 3300006871 Unclassified 1896
89 Ga0075429_100195294 3300006880 Unclassified 1773
90 Ga0068865_100075769 3300006881 Bacteria 2399
91 Ga0075436_100139878 3300006914 Bacteria 1701
92 Ga0075436_100296276 3300006914 Bacteria 1158
93 Ga0097620_100112763 3300006931 Bacteria 2782
94 Ga0097620_100199097 3300006931 Bacteria 2087
95 Ga0097620_100412581 3300006931 Bacteria 1446
96 Ga0105240_10451683 3300009093 Bacteria 1438
97 Ga0105240_10487026 3300009093 Bacteria 1374
98 Ga0111539_10007496 3300009094 Bacteria 13967
99 Ga0111539_10149179 3300009094 Bacteria 2737
100 Ga0111539_10249093 3300009094 Bacteria 2068
101 Ga0111539_10356880 3300009094 Bacteria 1701
102 Ga0111539_10776679 3300009094 Bacteria 1115
103 Ga0105245_10571696 3300009098 Bacteria 1154
104 Ga0114129_10014680 3300009147 Bacteria 11160
105 Ga0114129_10020539 3300009147 Bacteria 9394
106 Ga0114129_10505976 3300009147 Bacteria 1577
107 Ga0114129_11143208 3300009147 Bacteria 973
108 Ga0105248_10025846 3300009177 Bacteria 6530
109 Ga0105248_10280030 3300009177 Bacteria 1877
110 Ga0105237_10508995 3300009545 Bacteria 1211
111 Ga0105249_10055796 3300009553 Bacteria 3616
112 Ga0105239_10144288 3300010375 Bacteria 2654
113 Ga0157370_10185327 3300013104 Bacteria 1933
114 Ga0157374_10100575 3300013296 Bacteria 2771
115 Ga0163163_10224491 3300014325 Bacteria 1927
116 Ga0157380_10828621 3300014326 Bacteria 945
117 Ga0206353_10833923 3300020082 Bacteria 907
118 Ga0207653_10055654 3300025885 Bacteria 1325
119 Ga0207642_10076215 3300025899 Bacteria 1613
120 Ga0207643_10008506 3300025908 Bacteria 5505
121 Ga0207684_10000047 3300025910 Bacteria 244386
122 Ga0207649_10225284 3300025920 Bacteria 1338
123 Ga0207652_10056462 3300025921 Bacteria 3380
124 Ga0207681_10083758 3300025923 Bacteria 2258
125 Ga0207681_10141283 3300025923 Bacteria 1793
126 Ga0207650_10011879 3300025925 Bacteria 6000
127 Ga0207650_10048633 3300025925 Bacteria 3129
128 Ga0207650_10450002 3300025925 Bacteria 1072
129 Ga0207650_10458754 3300025925 Bacteria 1061
130 Ga0207700_10021570 3300025928 Bacteria 4401
131 Ga0207706_10024380 3300025933 Bacteria 5423
132 Ga0207686_10102044 3300025934 Bacteria 1917
133 Ga0207709_10023007 3300025935 Bacteria 3542
134 Ga0207670_10112258 3300025936 Bacteria 1966
135 Ga0207669_10041576 3300025937 Bacteria 2677
136 Ga0207711_10078149 3300025941 Bacteria 2886
137 Ga0207689_10026952 3300025942 Bacteria 4811
138 Ga0207689_10191909 3300025942 Bacteria 1686
139 Ga0207689_10623391 3300025942 Bacteria 908
140 Ga0207661_10004428 3300025944 Bacteria 9857
141 Ga0207679_10029717 3300025945 Bacteria 3807
142 Ga0207679_10034965 3300025945 Bacteria 3551
143 Ga0207712_10014191 3300025961 Bacteria 5117
144 Ga0207668_10292566 3300025972 Bacteria 1341
145 Ga0207640_10123259 3300025981 Bacteria 1861
146 Ga0207658_10069830 3300025986 Bacteria 2656
147 Ga0207703_10163703 3300026035 Bacteria 1950
148 Ga0207678_10024257 3300026067 Bacteria 5297
149 Ga0207678_10588962 3300026067 Bacteria 974
150 Ga0207708_10266445 3300026075 Unclassified 1384
151 Ga0207708_10355060 3300026075 Bacteria 1204
152 Ga0207702_10338248 3300026078 Bacteria 1437
153 Ga0207641_10147515 3300026088 Bacteria 2128
154 Ga0207648_10006114 3300026089 Bacteria 12004
155 Ga0207648_10742387 3300026089 Unclassified 911
156 Ga0207674_10017732 3300026116 Bacteria 7759
157 Ga0207674_10140188 3300026116 Bacteria 2377
158 Ga0207675_100103283 3300026118 Bacteria 2686
159 Ga0207675_100239654 3300026118 Bacteria 1752
160 Ga0207683_10199348 3300026121 Bacteria 1819
161 Ga0268265_10005894 3300028380 Bacteria 8350
162 Ga0268265_10498559 3300028380 Bacteria 1147
163 Ga0268265_10703692 3300028380 Bacteria 976
164 Ga0268264_10005854 3300028381 Bacteria 10409
165 Ga0268264_11065264 3300028381 Unclassified 816
166 Ga0307408_100103984 3300031548 Bacteria 2169
167 Ga0307413_10049101 3300031824 Bacteria 2527
168 Ga0307406_10055739 3300031901 Bacteria 2528
169 Ga0307407_10026601 3300031903 Bacteria 3066
170 Ga0307407_10437129 3300031903 Bacteria 947
171 Ga0307412_10107418 3300031911 Bacteria 1986
172 Ga0307412_10258819 3300031911 Bacteria 1355
173 Ga0307409_100241879 3300031995 Bacteria 1644
174 Ga0307409_100364593 3300031995 Bacteria 1368
175 Ga0307409_100402155 3300031995 Bacteria 1308
176 Ga0307409_100578614 3300031995 Bacteria 1107
177 Ga0307416_100258758 3300032002 Bacteria 1699
178 Ga0307416_100472820 3300032002 Bacteria 1311
179 Ga0307416_100968177 3300032002 Bacteria 953
180 Ga0307416_101073958 3300032002 Bacteria 909
181 Ga0307411_10136409 3300032005 Bacteria 1802
182 Ga0307411_10218187 3300032005 Bacteria 1478
183 Ga0307415_100022048 3300032126 Bacteria 3925
184 Ga0307415_100477163 3300032126 Unclassified 1085
185 Ga0373934_0058624 3300035086 Bacteria 1532
186 Ga0373932_0038057 3300035112 Bacteria 1374
187 Ga0373955_0016089 3300035172 Bacteria 3676
188 Ga0373955_0315565 3300035172 Bacteria 944
189 Ga0373931_0443192 3300035691 Bacteria 829
190 Ga0373935_0451310 3300035692 Bacteria 929
191 Ga0373933_0068946 3300035724 Bacteria 2149
192 Ga0373947_0127012 3300035725 Unclassified 1625
193 Ga0373937_0043758 3300036401 Bacteria 4089
194 Ga0373937_0337396 3300036401 Bacteria 1427
195 Ga0373925_0010990 3300037068 Bacteria 6573
196 Ga0395905_0371778 3300037471 Bacteria 1323
197 Ga0439431_0045283 3300041997 Bacteria 1130
198 Ga0439457_034130 3300042014 Bacteria 1130
199 Ga0439457_084084 3300042014 Bacteria 733
200 Ga0439446_0072658 3300042156 Bacteria 1055
201 Ga0439435_0053312 3300042436 Bacteria 1163
202 Ga0439464_0042697 3300042439 Bacteria 1295
203 Ga0439460_0016954 3300042461 Unclassified 1946
204 Ga0439440_0058145 3300042993 Bacteria 981
205 Ga0466972_0027597 3300044658 Bacteria 2808
206 Ga0453684_0151500 3300044712 Bacteria 2755
207 Ga0466967_0148135 3300045976 Bacteria 2191
208 Ga0495635_0223637 3300046663 Bacteria 1273
209 Ga0495636_0150408 3300047318 Bacteria 1044
210 Ga0496100_0121782 3300048903 Bacteria 1826
211 Ga0496102_0694525 3300048905 Unclassified 940
212 Ga0496103_0027362 3300048906 Bacteria 3455
213 Ga0496104_0004897 3300048907 Bacteria 11678
214 Ga0496106_0234428 3300048909 Bacteria 1466
215 Ga0496107_0373565 3300048910 Bacteria 1060
216 Ga0496110_0034583 3300048913 Bacteria 4379
217 Ga0496110_0565995 3300048913 Bacteria 1032
218 Ga0496111_0003983 3300048914 Bacteria 9274
219 Ga0496112_0060334 3300048915 Bacteria 3738
220 Ga0496113_0468743 3300048916 Bacteria 1012
221 Ga0496125_0264878 3300048928 Bacteria 1075
222 Ga0501034_0003614 3300049571 Bacteria 17553
223 Ga0501034_0008933 3300049571 Bacteria 10534
224 Ga0501036_0100387 3300049572 Bacteria 2448
225 Ga0501036_0614123 3300049572 Bacteria 901
226 Ga0501039_0039621 3300049575 Bacteria 3639
227 Ga0501040_0023599 3300049576 Bacteria 4125
228 Ga0501040_0161038 3300049576 Bacteria 1586
229 Ga0501041_0030353 3300049577 Bacteria 3262
230 Ga0501041_0310746 3300049577 Bacteria 994
231 Ga0501042_0051283 3300049578 Bacteria 2943
232 Ga0501042_0379016 3300049578 Bacteria 1024
233 Ga0501043_0540462 3300049579 Unclassified 867
234 Ga0501048_0032398 3300049582 Bacteria 3777
235 Ga0501067_0063154 3300049583 Bacteria 2051
236 Ga0501069_0034283 3300049585 Bacteria 2796
237 Ga0501071_0049829 3300049587 Bacteria 3015
238 Ga0501071_0322147 3300049587 Unclassified 1174
239 Ga0501073_0124923 3300049589 Bacteria 1784
240 Ga0501074_0033490 3300049590 Bacteria 3724
241 Ga0501075_0018909 3300049591 Bacteria 4994
242 Ga0501075_0067423 3300049591 Bacteria 2702
243 Ga0501075_0068597 3300049591 Bacteria 2679
244 Ga0501076_0024654 3300049592 Bacteria 4652
245 Ga0501076_0256180 3300049592 Bacteria 1432
246 Ga0501079_0161178 3300049741 Bacteria 1749
247 Ga0501079_0163805 3300049741 Bacteria 1734
248 Ga0501079_0545927 3300049741 Bacteria 911
249 Ga0501080_0147395 3300049742 Bacteria 2176
250 Ga0501080_0371554 3300049742 Bacteria 1289
251 Ga0501081_0047890 3300049743 Bacteria 2941
252 Ga0501035_0000222 3300049822 Bacteria 67780
253 Ga0501045_0140863 3300049824 Bacteria 1793
254 nmdc:mga03683_795_c1 3300050489 Bacteria 9025
255 nmdc:mga00v17_143573_c1 3300050491 Bacteria 1532
256 nmdc:mga00v17_17495_c1 3300050491 Bacteria 4060
257 nmdc:mga00v17_212854_c1 3300050491 Bacteria 1251
258 nmdc:mga00v17_48566_c1 3300050491 Bacteria 2572
259 nmdc:mga00v17_51038_c1 3300050491 Bacteria 2515
260 nmdc:mga0yw44_25148_c1 3300050492 Bacteria 3380
261 nmdc:mga0k408_68775_c1 3300050493 Bacteria 1444
262 nmdc:mga04h51_182751_c1 3300050495 Unclassified 817
263 nmdc:mga07m45_21858_c1 3300050496 Bacteria 3488
264 nmdc:mga05p37_191593_c1 3300050507 Bacteria 2482
265 nmdc:mga0qj67_203495_c1 3300050509 Unclassified 1608
266 nmdc:mga0qj67_28842_c1 3300050509 Bacteria 4309
267 nmdc:mga06r32_12285_c1 3300050510 Bacteria 7723
268 nmdc:mga06r32_131115_c1 3300050510 Bacteria 2479
269 nmdc:mga06r32_32564_c1 3300050510 Bacteria 4905
270 nmdc:mga06r32_464774_c1 3300050510 Bacteria 1244
271 nmdc:mga08y16_172442_c1 3300050511 Bacteria 2247
272 nmdc:mga08y16_354694_c1 3300050511 Bacteria 1506
273 nmdc:mga08y16_642396_c1 3300050511 Bacteria 1066
274 nmdc:mga0n895_123392_c1 3300050512 Bacteria 2612
275 nmdc:mga0n895_69114_c1 3300050512 Bacteria 3499
276 nmdc:mga0n895_767427_c1 3300050512 Bacteria 956
277 nmdc:mga0rr50_150850_c1 3300050513 Bacteria 1878
278 nmdc:mga0a205_20091_c1 3300050515 Bacteria 6301
279 Ga0495601_0067227 3300053077 Bacteria 2283
280 Ga0501084_0294170 3300054114 Bacteria 1371
281 Ga0590071_000352 3300059421 Bacteria 13553
282 Ga0590071_005161 3300059421 Bacteria 3150
283 Ga0590074_003067 3300059423 Bacteria 2757
284 Ga0590075_000387 3300059424 Bacteria 12095
285 Ga0590077_003628 3300059426 Bacteria 3189
286 Ga0590077_005341 3300059426 Bacteria 2634
287 Ga0501082_0257631 3300060353 Bacteria 1518
288 Ga0501082_0706951 3300060353 Bacteria 882
289 Ga0530510_0011523 3300061734 Bacteria 6204
290 Ga0065715_10196119
291 Ga0065704_10076171
292 Ga0065712_10080202
293 Ga0065715_10097461
294 Ga0065715_10252408
295 Ga0065707_10000901
296 Ga0065707_10135439
297 Ga0070676_10036262
298 Ga0070683_100000094
299 Ga0070690_100082069
300 Ga0070690_100429745
301 Ga0070670_100006978
302 Ga0070670_100018452
303 Ga0070670_100027710
304 Ga0070691_10100371
305 Ga0070687_100029676
306 Ga0070661_100438416
307 Ga0070668_100321650
308 Ga0070669_100001822
309 Ga0070669_100167625
310 Ga0070675_100199188
311 Ga0070675_100318970
312 Ga0070675_100465441
313 Ga0070673_100193218
314 Ga0070673_100302525
315 Ga0070688_100145246
316 Ga0070688_100168254
317 Ga0070659_100159877
318 Ga0070667_100048553
319 Ga0070713_100169230
320 Ga0070700_100033404
321 Ga0070700_100324738
322 Ga0070694_100243042
323 Ga0070708_100001086
324 Ga0070662_100127411
325 Ga0070681_10162458
326 Ga0070706_100001206
327 Ga0070707_100162340
328 Ga0070698_100085660
329 Ga0070699_100024274
330 Ga0070699_100283321
331 Ga0070679_100117748
332 Ga0070684_100006365
333 Ga0070686_100067617
334 Ga0070686_100075544
335 Ga0070695_100011528
336 Ga0070696_100203071
337 Ga0070693_100038797
338 Ga0070693_100361919
339 Ga0070704_100272747
340 Ga0070664_100000479
341 Ga0070664_100144563
342 Ga0068857_100014764
343 Ga0068854_100026719
344 Ga0068856_100506951
345 Ga0070702_100047742
346 Ga0070702_100177595
347 Ga0068852_100320797
348 Ga0068859_100112752
349 Ga0068859_100199093
350 Ga0068859_100412590
351 Ga0068851_10072936
352 Ga0068863_100172218
353 Ga0068860_100032141
354 Ga0068860_100134881
355 Ga0068862_100133312
356 Ga0070717_10060804
357 Ga0075368_10090104
358 Ga0075364_10025764
359 Ga0075364_10093379
360 Ga0075362_10003471
361 Ga0075366_10134404
362 Ga0097621_100192545
363 Ga0075428_100005429
364 Ga0075428_100224919
365 Ga0075428_100429460
366 Ga0075430_100006929
367 Ga0075430_100395402
368 Ga0075430_100502177
369 Ga0075431_100010222
370 Ga0075431_100030556
371 Ga0075431_100041683
372 Ga0075431_100738139
373 Ga0075433_10030452
374 Ga0075434_100008089
375 Ga0075434_100144336
376 Ga0075434_100202820
377 Ga0075434_100224985
378 Ga0075429_100195294
379 Ga0068865_100075769
380 Ga0075436_100139878
381 Ga0075436_100296276
382 Ga0097620_100112763
383 Ga0097620_100199097
384 Ga0097620_100412581
385 Ga0105240_10451683
386 Ga0105240_10487026
387 Ga0111539_10007496
388 Ga0111539_10149179
389 Ga0111539_10249093
390 Ga0111539_10356880
391 Ga0111539_10776679
392 Ga0105245_10571696
393 Ga0114129_10014680
394 Ga0114129_10020539
395 Ga0114129_10505976
396 Ga0114129_11143208
397 Ga0105248_10025846
398 Ga0105248_10280030
399 Ga0105237_10508995
400 Ga0105249_10055796
401 Ga0105239_10144288
402 Ga0157370_10185327
403 Ga0157374_10100575
404 Ga0163163_10224491
405 Ga0157380_10828621
406 Ga0206353_10833923
407 Ga0207653_10055654
408 Ga0207642_10076215
409 Ga0207643_10008506
410 Ga0207684_10000047
411 Ga0207649_10225284
412 Ga0207652_10056462
413 Ga0207681_10083758
414 Ga0207681_10141283
415 Ga0207650_10011879
416 Ga0207650_10048633
417 Ga0207650_10450002
418 Ga0207650_10458754
419 Ga0207700_10021570
420 Ga0207706_10024380
421 Ga0207686_10102044
422 Ga0207709_10023007
423 Ga0207670_10112258
424 Ga0207669_10041576
425 Ga0207711_10078149
426 Ga0207689_10026952
427 Ga0207689_10191909
428 Ga0207689_10623391
429 Ga0207661_10004428
430 Ga0207679_10029717
431 Ga0207679_10034965
432 Ga0207712_10014191
433 Ga0207668_10292566
434 Ga0207640_10123259
435 Ga0207658_10069830
436 Ga0207703_10163703
437 Ga0207678_10024257
438 Ga0207678_10588962
439 Ga0207708_10266445
440 Ga0207708_10355060
441 Ga0207702_10338248
442 Ga0207641_10147515
443 Ga0207648_10006114
444 Ga0207648_10742387
445 Ga0207674_10017732
446 Ga0207674_10140188
447 Ga0207675_100103283
448 Ga0207675_100239654
449 Ga0207683_10199348
450 Ga0268265_10005894
451 Ga0268265_10498559
452 Ga0268265_10703692
453 Ga0268264_10005854
454 Ga0268264_11065264
455 Ga0307408_100103984
456 Ga0307413_10049101
457 Ga0307406_10055739
458 Ga0307407_10026601
459 Ga0307407_10437129
460 Ga0307412_10107418
461 Ga0307412_10258819
462 Ga0307409_100241879
463 Ga0307409_100364593
464 Ga0307409_100402155
465 Ga0307409_100578614
466 Ga0307416_100258758
467 Ga0307416_100472820
468 Ga0307416_100968177
469 Ga0307416_101073958
470 Ga0307411_10136409
471 Ga0307411_10218187
472 Ga0307415_100022048
473 Ga0307415_100477163
474 Ga0373934_0058624
475 Ga0373932_0038057
476 Ga0373955_0016089
477 Ga0373955_0315565
478 Ga0373931_0443192
479 Ga0373935_0451310
480 Ga0373933_0068946
481 Ga0373947_0127012
482 Ga0373937_0043758
483 Ga0373937_0337396
484 Ga0373925_0010990
485 Ga0395905_0371778
486 Ga0439431_0045283
487 Ga0439457_034130
488 Ga0439457_084084
489 Ga0439446_0072658
490 Ga0439435_0053312
491 Ga0439464_0042697
492 Ga0439460_0016954
493 Ga0439440_0058145
494 Ga0466972_0027597
495 Ga0453684_0151500
496 Ga0466967_0148135
497 Ga0495635_0223637
498 Ga0495636_0150408
499 Ga0496100_0121782
500 Ga0496102_0694525
501 Ga0496103_0027362
502 Ga0496104_0004897
503 Ga0496106_0234428
504 Ga0496107_0373565
505 Ga0496110_0034583
506 Ga0496110_0565995
507 Ga0496111_0003983
508 Ga0496112_0060334
509 Ga0496113_0468743
510 Ga0496125_0264878
511 Ga0501034_0003614
512 Ga0501034_0008933
513 Ga0501036_0100387
514 Ga0501036_0614123
515 Ga0501039_0039621
516 Ga0501040_0023599
517 Ga0501040_0161038
518 Ga0501041_0030353
519 Ga0501041_0310746
520 Ga0501042_0051283
521 Ga0501042_0379016
522 Ga0501043_0540462
523 Ga0501048_0032398
524 Ga0501067_0063154
525 Ga0501069_0034283
526 Ga0501071_0049829
527 Ga0501071_0322147
528 Ga0501073_0124923
529 Ga0501074_0033490
530 Ga0501075_0018909
531 Ga0501075_0067423
532 Ga0501075_0068597
533 Ga0501076_0024654
534 Ga0501076_0256180
535 Ga0501079_0161178
536 Ga0501079_0163805
537 Ga0501079_0545927
538 Ga0501080_0147395
539 Ga0501080_0371554
540 Ga0501081_0047890
541 Ga0501035_0000222
542 Ga0501045_0140863
543 nmdc:mga03683_795_c1
544 nmdc:mga00v17_143573_c1
545 nmdc:mga00v17_17495_c1
546 nmdc:mga00v17_212854_c1
547 nmdc:mga00v17_48566_c1
548 nmdc:mga00v17_51038_c1
549 nmdc:mga0yw44_25148_c1
550 nmdc:mga0k408_68775_c1
551 nmdc:mga04h51_182751_c1
552 nmdc:mga07m45_21858_c1
553 nmdc:mga05p37_191593_c1
554 nmdc:mga0qj67_203495_c1
555 nmdc:mga0qj67_28842_c1
556 nmdc:mga06r32_12285_c1
557 nmdc:mga06r32_131115_c1
558 nmdc:mga06r32_32564_c1
559 nmdc:mga06r32_464774_c1
560 nmdc:mga08y16_172442_c1
561 nmdc:mga08y16_354694_c1
562 nmdc:mga08y16_642396_c1
563 nmdc:mga0n895_123392_c1
564 nmdc:mga0n895_69114_c1
565 nmdc:mga0n895_767427_c1
566 nmdc:mga0rr50_150850_c1
567 nmdc:mga0a205_20091_c1
568 Ga0495601_0067227
569 Ga0501084_0294170
570 Ga0590071_000352
571 Ga0590071_005161
572 Ga0590074_003067
573 Ga0590075_000387
574 Ga0590077_003628
575 Ga0590077_005341
576 Ga0501082_0257631
577 Ga0501082_0706951
578 Ga0530510_0011523

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08032

SpoU_sub_bind

RNA 2'-O ribose methyltransferase substrate binding

34

107

0.95

PF00588

SpoU_methylase

SpoU rRNA Methylase family

121

262

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gz0-assembly4.cif.gz_E 23s ribosomal rna g2251 2'o-methyltransferase rlmb 0.9198 77 217
1zjr-assembly1.cif.gz_A crystal structure of a. aeolicus trmh/spou trna modifying enzyme 0.906 86 218
1v2x-assembly1.cif.gz_A-2 trmh 0.8823 80 220
1sds-assembly1.cif.gz_A structure of protein l7ae bound to a k-turn derived from an archaeal box h/aca srna 0.8682 1 70
3v7q-assembly3.cif.gz_C crystal structure of b. subtilis ylxq at 1.55 a resolution 0.8671 2 70
ID Description Score Start End Superfamily
af_P63177_1_76_3.30.1330.30 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 0.9616 1 71 3.30.1330.30
af_P9WFY5_148_322_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9447 78 218 3.40.1280.10
af_P0AGJ2_1_204_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9334 89 220 3.40.1280.10
af_D3ZK81_42_122_3.30.1330.30 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 0.9292 1 70 3.30.1330.30
1gz0F01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 0.929 3 71 3.30.1330.30
ID Description Score Start End GO Terms
AF-A0A259P4I9-F1-model_v4 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB 0.9845 126 223 GO:0003723
GO:0005829
GO:0006396
GO:0008173
GO:0032259
AF-A0A316M382-F1-model_v4 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB 0.984 136 217 GO:0003723
GO:0005829
GO:0006396
GO:0008173
GO:0032259
AF-A0A7Y5QUH2-F1-model_v4 deleted 0.9778 133 219
AF-A0A1W9TV33-F1-model_v4 tRNA/rRNA methyltransferase SpoU type domain-containing protein 0.9761 123 217 GO:0003723
GO:0005829
GO:0006396
GO:0008173
GO:0032259
AF-A0A3C1WKA0-F1-model_v4 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB 0.973 138 218 GO:0003723
GO:0005829
GO:0006396
GO:0008173
GO:0032259

Map