F388897

General Info

Members Datasets Scaffolds Average Seq Length
288 235 576 760

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2524023129|2524186064
Length 884
Sequence GSDGFCKVWDCCFIKNHCKIERCIIGNRCRKISISRFPGKSQKTTESAFFFEIKECTTKNRGYFACFARIVTAYVKVGGDSYKLTLLQRLMMREIGCKELFTGDCGPNKHSCRINEKAFTNAYGLLLSYQGVTVMIGKKSLHDIINELRTNENIVNWFEIEPQEAKAAPFPEDINEKLRAALERRGIANLYTHQDSAYRTAVKGENIVAVTPTASGKTLCYNLPVLQEIANDDTSRALYLFPTKALAQDQMSELNEIIAEMGIAIKSYTYDGDTSPAIRQIVRKAGHIVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRGVFGSHVANVIRRLRRICSFYGSNPTFICTSATIANPKELAEQLTGSPMRLLDNNGAPRGRKHFVFYNPPIVNEPLNIRKSATVEVNNLAKEFLKNKIQTIVFARSRVRVEIILSHIQELVKNEIGTKSIRGYRGGYLPKQRREIERGLRDGEILGVVSTNALELGVDIGQLQVCVMTGYPGSIASTWQQAGRAGRRHGEALIVMVASSTPIDQYIVQNPDYFFERTPEHARINPENLLILVDHMRCAAYELPFKTTEEFGPLDISDILEYLQEERVLHRNGDTFYWSAQSFPASEISLRSASQENVVIVDQSNIAAVKIIGEMDRFSAMTLLHDEAIYLHQGIQYQVEKLDWEHKKAYVREVDVEYYTDANLAVNLKVLEIDKTIAKGQAVVNFGDVAVTMIPTIFKKIKLTTFENIGSGPIHLPEEELHTSATWLELKEVDPEIGTKTLEQLLLGIANVLQHIVPVLVMCDRSDVHVTPQIKAAHTGLPTIFIYDHYPGGIGLADDVYKRFNEVSEAAKNLIQKCPCKDGCPSCIGTEIAGLNGKKKTVQILSLLQ

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
34 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
52 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
53 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
54 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
55 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
56 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
59 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
62 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
63 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
67 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
91 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
92 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
93 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
126 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
129 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
132 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
133 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
134 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
135 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
136 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
137 2554235283 Bacillus safensis VK Isolate Rhizosphere
138 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
139 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
140 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
141 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
142 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
143 2643221731 Bacillus sp. Root147 Isolate Unclassified
144 2643221732 Bacillus sp. Root239 Isolate Unclassified
145 2643221735 Bacillus sp. Root920 Isolate Unclassified
146 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
147 2671180694 Paenibacillus sp. A3 Isolate Unclassified
148 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
149 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
150 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
151 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
152 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
153 2738541295 Bacillus sp. OK085 Isolate Unclassified
154 2738543010 Bacillus sp. YR335 Isolate Unclassified
155 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
156 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
157 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
158 2811994870 Bacillus sp. JB4 Isolate Unclassified
159 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
160 2818991441 Niallia circulans 3243 Isolate Rhizosphere
161 2818991459 Paenibacillus sp. 597 Isolate Unclassified
162 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
163 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
164 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
165 2842882022 Bacillus sp. R-71893 Isolate Unclassified
166 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
167 2857472729 Cohnella sp. R-74144 Isolate Unclassified
168 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
169 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
170 2860837431 Bacillus sp. WR11 Isolate Unclassified
171 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
172 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
173 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
174 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
175 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
176 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
177 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
178 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
179 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
180 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
181 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
182 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
183 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
184 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
185 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
186 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
187 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
188 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
189 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
190 2919720352 Priestia megaterium 4340 Isolate Unclassified
191 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
192 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
193 2929004312 Priestia megaterium 1104 Isolate Unclassified
194 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
195 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
196 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
197 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
198 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
199 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
200 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
201 2969141011 Bacillus velezensis MH25 Isolate Unclassified
202 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
203 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
204 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
205 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
206 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
207 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
208 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
209 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
210 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
211 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
212 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
213 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
214 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
215 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
216 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
217 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
218 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
219 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
220 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
221 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
222 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
223 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
224 8022653035 Bacillus sp. Rc4 Isolate Unclassified
225 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
226 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
227 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
228 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
229 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
230 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
231 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
232 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
233 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
234 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
235 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 63.89
Metatranscriptomes 0
Isolates 36.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.43
Nodule 0.35
Rhizoplane 9.03
Rhizosphere 65.97
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000029 3300003187 Bacteria 205878
2 rootH1_10005682 3300003316 Bacteria 19018
3 rootL2_10054563 3300003322 Bacteria 23241
4 Ga0070670_100038883 3300005331 Bacteria 4091
5 Ga0070680_100000004 3300005336 Bacteria 129387
6 Ga0070682_100032995 3300005337 Bacteria 3142
7 Ga0070689_100008871 3300005340 Bacteria 7104
8 Ga0070673_100075394 3300005364 Bacteria 2720
9 Ga0070705_100005902 3300005440 Bacteria 5986
10 Ga0070700_100003938 3300005441 Bacteria 7709
11 Ga0070708_100000063 3300005445 Bacteria 69658
12 Ga0070708_100001819 3300005445 Bacteria 16387
13 Ga0070708_100002481 3300005445 Bacteria 14254
14 Ga0070663_100037937 3300005455 Bacteria 3357
15 Ga0070685_10047737 3300005466 Bacteria 2464
16 Ga0070706_100000076 3300005467 Bacteria 114519
17 Ga0070706_100003779 3300005467 Bacteria 14781
18 Ga0070706_100013497 3300005467 Bacteria 7556
19 Ga0070706_100055038 3300005467 Bacteria 3672
20 Ga0070707_100007629 3300005468 Bacteria 10046
21 Ga0070698_100069429 3300005471 Bacteria 3537
22 Ga0070698_100082026 3300005471 Bacteria 3217
23 Ga0070699_100002916 3300005518 Bacteria 15221
24 Ga0070699_100006420 3300005518 Bacteria 10242
25 Ga0070699_100011876 3300005518 Bacteria 7518
26 Ga0070699_100056763 3300005518 Bacteria 3391
27 Ga0070695_100015094 3300005545 Bacteria 4662
28 Ga0070696_100003316 3300005546 Bacteria 10751
29 Ga0070696_100006361 3300005546 Bacteria 7903
30 Ga0070696_100023742 3300005546 Bacteria 4169
31 Ga0068870_10010886 3300005840 Bacteria 4197
32 Ga0068858_100042461 3300005842 Bacteria 4216
33 Ga0081539_10004024 3300005985 Bacteria 16888
34 Ga0075428_100000647 3300006844 Bacteria 35855
35 Ga0075428_100006688 3300006844 Bacteria 12826
36 Ga0075431_100003468 3300006847 Bacteria 15291
37 Ga0075429_100004958 3300006880 Bacteria 11468
38 Ga0111539_10001825 3300009094 Bacteria 28352
39 Ga0111539_10065166 3300009094 Bacteria 4306
40 Ga0105245_10006345 3300009098 Bacteria 10402
41 Ga0114129_10025359 3300009147 Bacteria 8401
42 Ga0114129_10183788 3300009147 Bacteria 2843
43 Ga0105249_10049265 3300009553 Bacteria 3842
44 Ga0105249_10093407 3300009553 Bacteria 2818
45 Ga0157374_10100786 3300013296 Bacteria 2768
46 Ga0163163_10014589 3300014325 Bacteria 7228
47 Ga0163163_10073835 3300014325 Bacteria 3402
48 Ga0163163_10092389 3300014325 Bacteria 3041
49 Ga0157380_10008353 3300014326 Bacteria 7383
50 Ga0157377_10002341 3300014745 Bacteria 8356
51 Ga0209566_100345 3300025225 Bacteria 40126
52 Ga0209566_101245 3300025225 Bacteria 8708
53 Ga0209025_1000001 3300025294 Bacteria 1888151
54 Ga0209025_1003097 3300025294 Bacteria 16299
55 Ga0209025_1005339 3300025294 Bacteria 10540
56 Ga0207426_1006998 3300025302 Bacteria 4789
57 Ga0207643_10000982 3300025908 Bacteria 17097
58 Ga0207684_10021928 3300025910 Bacteria 5454
59 Ga0207684_10022412 3300025910 Bacteria 5390
60 Ga0207684_10031676 3300025910 Bacteria 4498
61 Ga0207707_10028145 3300025912 Bacteria 4913
62 Ga0207660_10000001 3300025917 Bacteria 1034169
63 Ga0207662_10000475 3300025918 Bacteria 17932
64 Ga0207657_10084148 3300025919 Bacteria 2667
65 Ga0207646_10003000 3300025922 Bacteria 19480
66 Ga0207670_10037861 3300025936 Bacteria 3146
67 Ga0207678_10020549 3300026067 Bacteria 5789
68 Ga0207708_10031061 3300026075 Bacteria 4053
69 Ga0207648_10004055 3300026089 Bacteria 15199
70 Ga0207674_10015746 3300026116 Bacteria 8294
71 Ga0209974_10003704 3300027876 Bacteria 5494
72 Ga0207428_10012701 3300027907 Bacteria 7385
73 Ga0265319_1002799 3300028563 Bacteria 9361
74 Ga0265334_10016522 3300028573 Bacteria 3053
75 Ga0265322_10004290 3300028654 Bacteria 4259
76 Ga0265324_10002519 3300029957 Bacteria 9293
77 Ga0265332_10004262 3300031238 Bacteria 6764
78 Ga0265320_10001035 3300031240 Bacteria 20654
79 Ga0265325_10007199 3300031241 Bacteria 6691
80 Ga0265331_10030749 3300031250 Bacteria 2672
81 Ga0265316_10013579 3300031344 Bacteria 7227
82 Ga0307408_100012495 3300031548 Bacteria 5628
83 Ga0316576_10007326 3300031727 Bacteria 6937
84 Ga0316583_10007717 3300032133 Bacteria 3880
85 Ga0316574_0043299 3300035398 Bacteria 2782
86 Ga0373937_0057755 3300036401 Bacteria 3565
87 Ga0395899_0013222 3300037312 Bacteria 6313
88 Ga0439449_0000030 3300042007 Bacteria 42422
89 Ga0439449_0004238 3300042007 Bacteria 5543
90 Ga0439462_0000318 3300042015 Bacteria 8965
91 Ga0466969_0026512 3300044656 Bacteria 2971
92 Ga0466968_0003079 3300044735 Bacteria 6156
93 Ga0466959_0005614 3300045049 Bacteria 8625
94 Ga0495651_0011473 3300046462 Bacteria 6804
95 Ga0495652_0064784 3300046529 Bacteria 3073
96 Ga0496100_0000997 3300048903 Bacteria 13643
97 Ga0496101_0018747 3300048904 Bacteria 4711
98 Ga0496101_0046808 3300048904 Bacteria 3103
99 Ga0496102_0024925 3300048905 Bacteria 5320
100 Ga0496103_0003488 3300048906 Bacteria 9619
101 Ga0496103_0006662 3300048906 Bacteria 6894
102 Ga0496104_0000595 3300048907 Bacteria 30886
103 Ga0496104_0010855 3300048907 Bacteria 8145
104 Ga0496104_0045414 3300048907 Bacteria 4132
105 Ga0496104_0048039 3300048907 Bacteria 4024
106 Ga0496105_0000171 3300048908 Bacteria 43079
107 Ga0496105_0001712 3300048908 Bacteria 15664
108 Ga0496106_0001658 3300048909 Bacteria 16707
109 Ga0496107_0000950 3300048910 Bacteria 17157
110 Ga0496107_0026336 3300048910 Bacteria 4121
111 Ga0496108_0002718 3300048911 Bacteria 14136
112 Ga0496108_0032775 3300048911 Bacteria 4315
113 Ga0496109_0000225 3300048912 Bacteria 55010
114 Ga0496109_0004373 3300048912 Bacteria 11803
115 Ga0496110_0014860 3300048913 Bacteria 6470
116 Ga0496111_0001314 3300048914 Bacteria 13946
117 Ga0496111_0006555 3300048914 Bacteria 7570
118 Ga0496112_0000005 3300048915 Bacteria 525541
119 Ga0496112_0000366 3300048915 Bacteria 29493
120 Ga0496113_0006250 3300048916 Bacteria 7523
121 Ga0496113_0007015 3300048916 Bacteria 7204
122 Ga0496116_0020211 3300048919 Bacteria 5064
123 Ga0496117_0018374 3300048920 Bacteria 5791
124 Ga0496119_0002969 3300048922 Bacteria 18023
125 Ga0496119_0033812 3300048922 Bacteria 3382
126 Ga0496122_0002060 3300048925 Bacteria 29835
127 Ga0496122_0003101 3300048925 Bacteria 22329
128 Ga0496123_0005727 3300048926 Bacteria 12376
129 Ga0496123_0034096 3300048926 Bacteria 3652
130 Ga0496124_0002040 3300048927 Bacteria 27456
131 Ga0496125_0001674 3300048928 Bacteria 31083
132 Ga0496126_0007280 3300048929 Bacteria 12165
133 Ga0501031_0033657 3300049568 Bacteria 3344
134 Ga0501036_0026107 3300049572 Bacteria 4930
135 Ga0501036_0029767 3300049572 Bacteria 4613
136 Ga0501038_0037947 3300049574 Bacteria 4220
137 Ga0501039_0026639 3300049575 Bacteria 4442
138 Ga0501040_0001406 3300049576 Bacteria 15215
139 Ga0501040_0010892 3300049576 Bacteria 5945
140 Ga0501040_0020448 3300049576 Bacteria 4410
141 Ga0501041_0026362 3300049577 Bacteria 3496
142 Ga0501046_0035331 3300049580 Bacteria 4028
143 Ga0501048_0013953 3300049582 Bacteria 5956
144 Ga0501048_0018893 3300049582 Bacteria 5066
145 Ga0501067_0008168 3300049583 Bacteria 5814
146 Ga0501068_0017202 3300049584 Bacteria 4178
147 Ga0501068_0017220 3300049584 Bacteria 4176
148 Ga0501069_0006890 3300049585 Bacteria 5939
149 Ga0501070_0015819 3300049586 Bacteria 6343
150 Ga0501071_0011411 3300049587 Bacteria 5985
151 Ga0501071_0016130 3300049587 Bacteria 5135
152 Ga0501071_0072642 3300049587 Unclassified 2509
153 Ga0501072_0004228 3300049588 Bacteria 10888
154 Ga0501072_0043418 3300049588 Bacteria 3533
155 Ga0501074_0014657 3300049590 Bacteria 5702
156 Ga0501075_0015426 3300049591 Bacteria 5484
157 Ga0501075_0020503 3300049591 Bacteria 4810
158 Ga0501076_0014443 3300049592 Bacteria 5949
159 Ga0501076_0014507 3300049592 Bacteria 5937
160 Ga0501076_0043299 3300049592 Bacteria 3546
161 Ga0501077_0042322 3300049593 Bacteria 2896
162 Ga0501080_0047496 3300049742 Bacteria 3996
163 Ga0501080_0112814 3300049742 Unclassified 2520
164 Ga0501081_0012955 3300049743 Bacteria 5485
165 Ga0501081_0019203 3300049743 Bacteria 4548
166 Ga0501083_0052784 3300049744 Bacteria 2730
167 Ga0501035_0035534 3300049822 Bacteria 4522
168 Ga0501045_0006483 3300049824 Bacteria 8108
169 Ga0501045_0024562 3300049824 Bacteria 4327
170 nmdc:mga05p37_150_c1 3300050507 Bacteria 65679
171 nmdc:mga09592_4271_c1 3300050508 Bacteria 11539
172 nmdc:mga0qj67_2104_c1 3300050509 Bacteria 14180
173 nmdc:mga06r32_307_c1 3300050510 Bacteria 40606
174 nmdc:mga08y16_1007_c1 3300050511 Bacteria 27548
175 nmdc:mga0a205_57765_c1 3300050515 Bacteria 3746
176 Ga0495601_0026586 3300053077 Bacteria 3574
177 Ga0495612_0003525 3300053078 Bacteria 6486
178 Ga0495595_0001789 3300053084 Bacteria 8378
179 Ga0495619_0025586 3300053085 Bacteria 3791
180 Ga0501084_0026252 3300054114 Bacteria 4858
181 Ga0590071_001143 3300059421 Bacteria 7158
182 Ga0501082_0026255 3300060353 Bacteria 5018
183 Ga0501082_0062858 3300060353 Bacteria 3196
184 Ga0530510_0033245 3300061734 Bacteria 3713
185 2524186064 2524023129 Bacteria 6762600
186 2511699992 2511231119 Bacteria 4019861
187 2512732680 2512564039 Bacteria 8739048
188 2540607156 2540341094 Bacteria 4061186
189 2545556677 2545555800 Bacteria 4222588
190 2555467392 2554235283 Bacteria 3683090
191 2578930926 2576861599 Bacteria 4217202
192 2587741002 2585428059 Bacteria 8696589
193 2595315359 2593339198 Bacteria 7267884
194 2631983196 2630968484 Bacteria 3876276
195 2644422316 2643221676 Bacteria 8119172
196 2644719342 2643221731 Bacteria 5623886
197 2644722218 2643221732 Bacteria 5756404
198 2644740569 2643221735 Bacteria 3676263
199 2651532130 2648501850 Bacteria 3975476
200 2673818348 2671180694 Bacteria 7506943
201 2674419093 2671180844 Bacteria 4164150
202 2686997221 2684623153 Bacteria 3878815
203 2687498528 2687453109 Bacteria 3860091
204 2695627969 2695420354 Bacteria 3922431
205 2717916315 2716884898 Bacteria 3928789
206 2738814223 2738541295 Bacteria 5730091
207 2739230556 2738543010 Bacteria 5583595
208 2745165777 2744054657 Bacteria 5016802
209 2793182943 2791355222 Bacteria 5898266
210 2809056679 2808606399 Bacteria 4021018
211 2812316410 2811994870 Bacteria 3776934
212 2817618835 2816332336 Bacteria 5207640
213 2819569543 2818991441 Bacteria 5062707
214 2819668938 2818991459 Bacteria 8736032
215 2819708082 2818991465 Bacteria 5388835
216 2819723482 2818991468 Bacteria 3723169
217 2823528394 2823526263 Bacteria 3765752
218 2842885291 2842882022 Bacteria 6158489
219 2857454006 2857453340 Bacteria 8090534
220 2857475813 2857472729 Bacteria 6568124
221 2857604320 2857604169 Bacteria 5111450
222 2857610984 2857609550 Bacteria 3753890
223 2860839838 2860837431 Bacteria 4202080
224 2865001605 2864997549 Bacteria 5139696
225 2865004333 2865002811 Bacteria 6333767
226 2877770872 2877768649 Bacteria 3957164
227 2880171737 2880169592 Bacteria 3900066
228 2888582476 2888578766 Bacteria 6743310
229 2889055270 2889049205 Bacteria 7524325
230 2889296949 2889295896 Bacteria 4704906
231 2897111962 2897109615 Bacteria 4009619
232 2904115534 2904113452 Bacteria 7796941
233 2904527729 2904524088 Bacteria 5887454
234 2904563635 2904560550 Bacteria 4029838
235 2904762267 2904755435 Bacteria 7986759
236 2908668402 2908665501 Bacteria 3678115
237 2916974254 2916971899 Bacteria 4250608
238 2919096171 2919093281 Bacteria 3660974
239 2919143626 2919143609 Bacteria 6219228
240 2919414789 2919414237 Bacteria 5429133
241 2919429359 2919425241 Bacteria 8055701
242 2919520838 2919517244 Bacteria 5858162
243 2919724447 2919720352 Bacteria 5986006
244 2925326221 2925326138 Bacteria 9652120
245 2928097529 2928093941 Bacteria 5965005
246 2929004674 2929004312 Bacteria 5678476
247 2929208994 2929206907 Bacteria 5918291
248 2936367139 2936361878 Bacteria 5632809
249 2960323136 2960319331 Bacteria 5502575
250 2960381525 2960375949 Bacteria 5361395
251 2962293108 2962290636 Bacteria 4072939
252 2964378539 2964375228 Bacteria 4909004
253 2969139119 2969136845 Bacteria 3923176
254 2969143316 2969141011 Bacteria 4118468
255 2969767085 2969765954 Bacteria 4216713
256 2969773599 2969770375 Bacteria 4271280
257 2971414966 2971410472 Bacteria 8311090
258 2971895516 2971893375 Bacteria 3929648
259 2980127848 2980125574 Bacteria 5567337
260 2980189464 2980182181 Bacteria 9454109
261 2980494853 2980492589 Bacteria 4072961
262 2981285423 2981284811 Bacteria 4641497
263 2981290369 2981289755 Bacteria 4641509
264 2981981002 2981980479 Bacteria 4641628
265 2981985889 2981985349 Bacteria 4641497
266 3001268147 3001267043 Bacteria 4823521
267 3001273645 3001272096 Bacteria 4729684
268 3006830509 3006826541 Bacteria 4678913
269 3006860803 3006858327 Bacteria 4317835
270 3006881339 3006879489 Bacteria 4064221
271 3006972992 3006969106 Bacteria 4739423
272 3006975607 3006973921 Bacteria 4423788
273 3006984840 3006984091 Bacteria 4207523
274 3006989183 3006988479 Bacteria 4767936
275 8002319631 8002317523 Bacteria 8051857
276 8022633572 8022630665 Bacteria 3886130
277 8022657348 8022653035 Bacteria 4035078
278 8022893847 8022893055 Bacteria 5300455
279 8022915420 8022914991 Bacteria 5584517
280 8022951836 8022948649 Bacteria 5366783
281 8051955543 8051952484 Bacteria 3926774
282 8052176744 8052174270 Bacteria 3881265
283 8054281520 8054280661 Bacteria 4232245
284 8054798873 8054795415 Bacteria 9785225
285 8055634791 8055632911 Bacteria 5283357
286 8056533959 8056533031 Bacteria 8964429
287 8057474648 8057473075 Bacteria 5892720
288 8057980002 8057977335 Bacteria 5694872
289 JGI25151J46595_10000029
290 rootH1_10005682
291 rootL2_10054563
292 Ga0070670_100038883
293 Ga0070680_100000004
294 Ga0070682_100032995
295 Ga0070689_100008871
296 Ga0070673_100075394
297 Ga0070705_100005902
298 Ga0070700_100003938
299 Ga0070708_100000063
300 Ga0070708_100001819
301 Ga0070708_100002481
302 Ga0070663_100037937
303 Ga0070685_10047737
304 Ga0070706_100000076
305 Ga0070706_100003779
306 Ga0070706_100013497
307 Ga0070706_100055038
308 Ga0070707_100007629
309 Ga0070698_100069429
310 Ga0070698_100082026
311 Ga0070699_100002916
312 Ga0070699_100006420
313 Ga0070699_100011876
314 Ga0070699_100056763
315 Ga0070695_100015094
316 Ga0070696_100003316
317 Ga0070696_100006361
318 Ga0070696_100023742
319 Ga0068870_10010886
320 Ga0068858_100042461
321 Ga0081539_10004024
322 Ga0075428_100000647
323 Ga0075428_100006688
324 Ga0075431_100003468
325 Ga0075429_100004958
326 Ga0111539_10001825
327 Ga0111539_10065166
328 Ga0105245_10006345
329 Ga0114129_10025359
330 Ga0114129_10183788
331 Ga0105249_10049265
332 Ga0105249_10093407
333 Ga0157374_10100786
334 Ga0163163_10014589
335 Ga0163163_10073835
336 Ga0163163_10092389
337 Ga0157380_10008353
338 Ga0157377_10002341
339 Ga0209566_100345
340 Ga0209566_101245
341 Ga0209025_1000001
342 Ga0209025_1003097
343 Ga0209025_1005339
344 Ga0207426_1006998
345 Ga0207643_10000982
346 Ga0207684_10021928
347 Ga0207684_10022412
348 Ga0207684_10031676
349 Ga0207707_10028145
350 Ga0207660_10000001
351 Ga0207662_10000475
352 Ga0207657_10084148
353 Ga0207646_10003000
354 Ga0207670_10037861
355 Ga0207678_10020549
356 Ga0207708_10031061
357 Ga0207648_10004055
358 Ga0207674_10015746
359 Ga0209974_10003704
360 Ga0207428_10012701
361 Ga0265319_1002799
362 Ga0265334_10016522
363 Ga0265322_10004290
364 Ga0265324_10002519
365 Ga0265332_10004262
366 Ga0265320_10001035
367 Ga0265325_10007199
368 Ga0265331_10030749
369 Ga0265316_10013579
370 Ga0307408_100012495
371 Ga0316576_10007326
372 Ga0316583_10007717
373 Ga0316574_0043299
374 Ga0373937_0057755
375 Ga0395899_0013222
376 Ga0439449_0000030
377 Ga0439449_0004238
378 Ga0439462_0000318
379 Ga0466969_0026512
380 Ga0466968_0003079
381 Ga0466959_0005614
382 Ga0495651_0011473
383 Ga0495652_0064784
384 Ga0496100_0000997
385 Ga0496101_0018747
386 Ga0496101_0046808
387 Ga0496102_0024925
388 Ga0496103_0003488
389 Ga0496103_0006662
390 Ga0496104_0000595
391 Ga0496104_0010855
392 Ga0496104_0045414
393 Ga0496104_0048039
394 Ga0496105_0000171
395 Ga0496105_0001712
396 Ga0496106_0001658
397 Ga0496107_0000950
398 Ga0496107_0026336
399 Ga0496108_0002718
400 Ga0496108_0032775
401 Ga0496109_0000225
402 Ga0496109_0004373
403 Ga0496110_0014860
404 Ga0496111_0001314
405 Ga0496111_0006555
406 Ga0496112_0000005
407 Ga0496112_0000366
408 Ga0496113_0006250
409 Ga0496113_0007015
410 Ga0496116_0020211
411 Ga0496117_0018374
412 Ga0496119_0002969
413 Ga0496119_0033812
414 Ga0496122_0002060
415 Ga0496122_0003101
416 Ga0496123_0005727
417 Ga0496123_0034096
418 Ga0496124_0002040
419 Ga0496125_0001674
420 Ga0496126_0007280
421 Ga0501031_0033657
422 Ga0501036_0026107
423 Ga0501036_0029767
424 Ga0501038_0037947
425 Ga0501039_0026639
426 Ga0501040_0001406
427 Ga0501040_0010892
428 Ga0501040_0020448
429 Ga0501041_0026362
430 Ga0501046_0035331
431 Ga0501048_0013953
432 Ga0501048_0018893
433 Ga0501067_0008168
434 Ga0501068_0017202
435 Ga0501068_0017220
436 Ga0501069_0006890
437 Ga0501070_0015819
438 Ga0501071_0011411
439 Ga0501071_0016130
440 Ga0501071_0072642
441 Ga0501072_0004228
442 Ga0501072_0043418
443 Ga0501074_0014657
444 Ga0501075_0015426
445 Ga0501075_0020503
446 Ga0501076_0014443
447 Ga0501076_0014507
448 Ga0501076_0043299
449 Ga0501077_0042322
450 Ga0501080_0047496
451 Ga0501080_0112814
452 Ga0501081_0012955
453 Ga0501081_0019203
454 Ga0501083_0052784
455 Ga0501035_0035534
456 Ga0501045_0006483
457 Ga0501045_0024562
458 nmdc:mga05p37_150_c1
459 nmdc:mga09592_4271_c1
460 nmdc:mga0qj67_2104_c1
461 nmdc:mga06r32_307_c1
462 nmdc:mga08y16_1007_c1
463 nmdc:mga0a205_57765_c1
464 Ga0495601_0026586
465 Ga0495612_0003525
466 Ga0495595_0001789
467 Ga0495619_0025586
468 Ga0501084_0026252
469 Ga0590071_001143
470 Ga0501082_0026255
471 Ga0501082_0062858
472 Ga0530510_0033245
473 2524186064
474 2511699992
475 2512732680
476 2540607156
477 2545556677
478 2555467392
479 2578930926
480 2587741002
481 2595315359
482 2631983196
483 2644422316
484 2644719342
485 2644722218
486 2644740569
487 2651532130
488 2673818348
489 2674419093
490 2686997221
491 2687498528
492 2695627969
493 2717916315
494 2738814223
495 2739230556
496 2745165777
497 2793182943
498 2809056679
499 2812316410
500 2817618835
501 2819569543
502 2819668938
503 2819708082
504 2819723482
505 2823528394
506 2842885291
507 2857454006
508 2857475813
509 2857604320
510 2857610984
511 2860839838
512 2865001605
513 2865004333
514 2877770872
515 2880171737
516 2888582476
517 2889055270
518 2889296949
519 2897111962
520 2904115534
521 2904527729
522 2904563635
523 2904762267
524 2908668402
525 2916974254
526 2919096171
527 2919143626
528 2919414789
529 2919429359
530 2919520838
531 2919724447
532 2925326221
533 2928097529
534 2929004674
535 2929208994
536 2936367139
537 2960323136
538 2960381525
539 2962293108
540 2964378539
541 2969139119
542 2969143316
543 2969767085
544 2969773599
545 2971414966
546 2971895516
547 2980127848
548 2980189464
549 2980494853
550 2981285423
551 2981290369
552 2981981002
553 2981985889
554 3001268147
555 3001273645
556 3006830509
557 3006860803
558 3006881339
559 3006972992
560 3006975607
561 3006984840
562 3006989183
563 8002319631
564 8022633572
565 8022657348
566 8022893847
567 8022915420
568 8022951836
569 8051955543
570 8052176744
571 8054281520
572 8054798873
573 8055634791
574 8056533959
575 8057474648
576 8057980002

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09369

MZB

MrfA Zn-binding domain

784

863

0.93

PF00270

DEAD

DEAD/DEAH box helicase

191

366

0.9

PF22982

HRQ1_WHD

ATP-dependent helicase HRQ1, winged helix domain

559

628

0.87

PF00271

Helicase_C

Helicase conserved C-terminal domain

411

524

0.86

PF04851

ResIII

Type III restriction enzyme, res subunit

184

361

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zns-assembly1.cif.gz_A crystal structure of duf1998 helicase mrfa 0.8676 35 744
6zns-assembly1.cif.gz_A crystal structure of duf1998 helicase mrfa 0.865 35 744
2oxc-assembly2.cif.gz_B human dead-box rna helicase ddx20, dead domain in complex with adp 0.8467 39 244
7pmm-assembly1.cif.gz_B dead-box helicase dbpa in the active conformation bound to a ss/dsrna junction and adp/bef3 0.8301 32 411
2yjt-assembly1.cif.gz_D crystal structure of e. coli dead-box protein srmb bound to regulator of ribonuclease activity a (rraa) 0.8289 255 400
ID Description Score Start End Superfamily
af_Q6Z8Y2_162_375_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9809 30 237 3.40.50.300
af_O13983_282_510_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9683 29 249 3.40.50.300
af_O06359_35_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9577 31 241 3.40.50.300
af_A0A1D8PFW0_275_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9517 38 237 3.40.50.300
af_Q6Z8Y2_162_375_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9494 30 237 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A660TZ89-F1-model_v4 ATP-dependent helicase 0.9741 18 308 GO:0003676
GO:0005524
GO:0006289
GO:0036297
GO:0043138
AF-A0A399YHW6-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9708 5 176 GO:0003676
GO:0005524
GO:0006289
GO:0036297
GO:0043138
AF-A0A7W0LDB4-F1-model_v4 DEAD/DEAH box helicase 0.9679 25 415 GO:0003676
GO:0005524
GO:0006289
GO:0036297
GO:0043138
AF-A0A7C0WBX2-F1-model_v4 DEAD/DEAH box helicase 0.9664 4 168 GO:0003676
GO:0005524
GO:0006289
GO:0036297
GO:0043138
AF-A0A660TZ89-F1-model_v4 ATP-dependent helicase 0.9609 18 308 GO:0003676
GO:0005524
GO:0006289
GO:0036297
GO:0043138

Map