F388880

General Info

Members Datasets Scaffolds Average Seq Length
288 173 288 359

Family's Representative Sequence

Representative Sequence 3300050513|nmdc:mga0rr50_70401_c1|nmdc:mga0rr50_70401_c1_244_1386
Length 380
Sequence LATNSQNDQPLSIRRIVAQARKELTQIVRDWRTLVLALVLPLILLILNGSAISLTSTDLPIIVQDYDGSPASRDLIDAFRASITFRVVSWPSDRRPEDAFASGTAHASLIIPKNFSRDIARGIVSPVQLLVDASDANTAKLIAGYSNQIVRAYNDRTAGASRPNPVEPSIRLWYNPGRSSKKFYGPGIFVLGISMFPPLLAALAMAKEGEQQTILQVYVSSISAGELLLGKIIAFIVVALAECVLGLLLLFTYFGVSLAGDPTPFLVATILYAFCVASFGTLVGAAIPNQAAAMQAVALGGFLLVFLLSGLIFPVDNIPAGLRWLSNFVWGKYYIEIVRDALLQGGGWPATWLKVVIIGVIGTIFYVAAWASMRRMQLKA

Samples

Sample ID Description Type Environment
1 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
97 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
98 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
108 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
145 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
146 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
147 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
148 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
149 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
150 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
154 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 0
Rhizoplane 2.08
Rhizosphere 94.79
Stem 0
Stem Tuber 0
Unclassified 2.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058861_12068356 3300004800 Unclassified 1414
2 Ga0065714_10065548 3300005288 Bacteria 9464
3 Ga0065712_10068668 3300005290 Bacteria 9465
4 Ga0065715_10089698 3300005293 Bacteria 8860
5 Ga0070658_10132125 3300005327 Bacteria 2081
6 Ga0068869_100093497 3300005334 Unclassified 2266
7 Ga0070680_100039129 3300005336 Bacteria 3838
8 Ga0070680_100058522 3300005336 Bacteria 3151
9 Ga0070680_100120349 3300005336 Bacteria 2191
10 Ga0070659_100041306 3300005366 Bacteria 3605
11 Ga0070667_100289091 3300005367 Bacteria 1473
12 Ga0070709_10000053 3300005434 Bacteria 89149
13 Ga0070711_100052714 3300005439 Bacteria 2801
14 Ga0070705_100034167 3300005440 Bacteria 2841
15 Ga0070705_100153322 3300005440 Bacteria 1531
16 Ga0070694_100225006 3300005444 Bacteria 1409
17 Ga0070708_100131538 3300005445 Bacteria 2316
18 Ga0070662_100024679 3300005457 Bacteria 4145
19 Ga0070681_10000864 3300005458 Bacteria 25499
20 Ga0070681_10014972 3300005458 Bacteria 7712
21 Ga0070681_10034760 3300005458 Bacteria 5062
22 Ga0070681_10070357 3300005458 Bacteria 3465
23 Ga0070706_100427880 3300005467 Bacteria 1232
24 Ga0070679_100157869 3300005530 Unclassified 2243
25 Ga0070679_100278201 3300005530 Unclassified 1627
26 Ga0068853_100028243 3300005539 Bacteria 4717
27 Ga0070696_100037487 3300005546 Unclassified 3345
28 Ga0070693_100017024 3300005547 Bacteria 3772
29 Ga0070665_100088876 3300005548 Bacteria 3095
30 Ga0070665_100356128 3300005548 Unclassified 1469
31 Ga0070704_100010340 3300005549 Bacteria 5675
32 Ga0068855_100008544 3300005563 Bacteria 12376
33 Ga0068855_100118759 3300005563 Bacteria 3028
34 Ga0068855_100221580 3300005563 Bacteria 2121
35 Ga0070664_100053828 3300005564 Bacteria 3413
36 Ga0068857_100038900 3300005577 Bacteria 4212
37 Ga0068857_100285880 3300005577 Bacteria 1518
38 Ga0068856_100016295 3300005614 Bacteria 7193
39 Ga0068856_100016889 3300005614 Bacteria 7074
40 Ga0068856_100054814 3300005614 Bacteria 3934
41 Ga0068864_100043735 3300005618 Bacteria 3836
42 Ga0068863_100170170 3300005841 Bacteria 2089
43 Ga0068862_100023220 3300005844 Bacteria 5195
44 Ga0081455_10008056 3300005937 Bacteria 11005
45 Ga0081539_10000372 3300005985 Bacteria 98410
46 Ga0097621_100017441 3300006237 Bacteria 5451
47 Ga0068871_100039413 3300006358 Bacteria 3780
48 Ga0075428_100023701 3300006844 Bacteria 6793
49 Ga0075428_100125939 3300006844 Bacteria 2788
50 Ga0075431_100036862 3300006847 Bacteria 5038
51 Ga0075431_100037268 3300006847 Bacteria 5011
52 Ga0075431_100058583 3300006847 Bacteria 3975
53 Ga0075431_100225973 3300006847 Bacteria 1908
54 Ga0075433_10006574 3300006852 Bacteria 9203
55 Ga0075434_100011782 3300006871 Bacteria 8262
56 Ga0075434_100282729 3300006871 Unclassified 1678
57 Ga0075434_100364114 3300006871 Bacteria 1467
58 Ga0075434_100379976 3300006871 Bacteria 1433
59 Ga0075429_100025221 3300006880 Bacteria 5161
60 Ga0075429_100058556 3300006880 Bacteria 3355
61 Ga0075429_100096352 3300006880 Bacteria 2581
62 Ga0075436_100007852 3300006914 Bacteria 7300
63 Ga0075435_100024627 3300007076 Bacteria 4674
64 Ga0075435_100191173 3300007076 Bacteria 1733
65 Ga0099794_10014040 3300007265 Unclassified 3500
66 Ga0105240_10000395 3300009093 Bacteria 81541
67 Ga0105240_10001293 3300009093 Bacteria 43254
68 Ga0105240_10067626 3300009093 Bacteria 4429
69 Ga0105240_10157313 3300009093 Bacteria 2702
70 Ga0105240_10349369 3300009093 Bacteria 1678
71 Ga0111539_10000708 3300009094 Bacteria 43220
72 Ga0111539_10120302 3300009094 Bacteria 3076
73 Ga0105247_10217380 3300009101 Unclassified 1292
74 Ga0114129_10029647 3300009147 Bacteria 7749
75 Ga0114129_10032666 3300009147 Bacteria 7354
76 Ga0114129_10095614 3300009147 Bacteria 4115
77 Ga0114129_10165388 3300009147 Bacteria 3020
78 Ga0105241_10120471 3300009174 Unclassified 2112
79 Ga0105237_10001514 3300009545 Bacteria 30517
80 Ga0105237_10008384 3300009545 Bacteria 11199
81 Ga0105237_10183396 3300009545 Bacteria 2093
82 Ga0099796_10014830 3300010159 Bacteria 2262
83 Ga0105239_10531316 3300010375 Unclassified 1339
84 Ga0105246_10257385 3300011119 Bacteria 1389
85 Ga0157371_10127791 3300013102 Bacteria 1808
86 Ga0157370_10060614 3300013104 Bacteria 3592
87 Ga0157370_10207327 3300013104 Unclassified 1817
88 Ga0157370_10230943 3300013104 Bacteria 1712
89 Ga0157370_10274942 3300013104 Unclassified 1556
90 Ga0157369_10001878 3300013105 Bacteria 25337
91 Ga0157369_10002606 3300013105 Bacteria 21576
92 Ga0157369_10138890 3300013105 Bacteria 2572
93 Ga0157369_10218531 3300013105 Bacteria 1995
94 Ga0157374_10004653 3300013296 Bacteria 11508
95 Ga0157374_10233821 3300013296 Unclassified 1806
96 Ga0157372_10005046 3300013307 Bacteria 14022
97 Ga0157372_10263631 3300013307 Unclassified 2001
98 Ga0163163_10366067 3300014325 Bacteria 1498
99 Ga0213875_10000004 3300021388 Bacteria 703388
100 Ga0213875_10000029 3300021388 Bacteria 182973
101 Ga0213875_10065436 3300021388 Unclassified 1699
102 Ga0207699_10000051 3300025906 Bacteria 104651
103 Ga0207705_10050983 3300025909 Bacteria 2979
104 Ga0207684_10073163 3300025910 Bacteria 2910
105 Ga0207684_10370741 3300025910 Bacteria 1232
106 Ga0207654_10028824 3300025911 Bacteria 3031
107 Ga0207707_10004290 3300025912 Bacteria 12622
108 Ga0207707_10012887 3300025912 Bacteria 7277
109 Ga0207707_10081029 3300025912 Bacteria 2834
110 Ga0207707_10136663 3300025912 Bacteria 2143
111 Ga0207707_10249776 3300025912 Bacteria 1541
112 Ga0207695_10001481 3300025913 Bacteria 39284
113 Ga0207695_10002131 3300025913 Bacteria 29985
114 Ga0207671_10076059 3300025914 Bacteria 2512
115 Ga0207663_10094764 3300025916 Unclassified 1990
116 Ga0207660_10020359 3300025917 Bacteria 4450
117 Ga0207660_10127614 3300025917 Bacteria 1933
118 Ga0207657_10053719 3300025919 Bacteria 3489
119 Ga0207652_10282847 3300025921 Bacteria 1496
120 Ga0207646_10188029 3300025922 Bacteria 1865
121 Ga0207681_10235219 3300025923 Bacteria 1424
122 Ga0207687_10143668 3300025927 Bacteria 1813
123 Ga0207700_10062110 3300025928 Bacteria 2836
124 Ga0207706_10030564 3300025933 Bacteria 4804
125 Ga0207665_10039126 3300025939 Bacteria 3160
126 Ga0207689_10143389 3300025942 Bacteria 1968
127 Ga0207661_10037665 3300025944 Bacteria 3785
128 Ga0207679_10023904 3300025945 Unclassified 4185
129 Ga0207702_10013820 3300026078 Bacteria 6706
130 Ga0207702_10042169 3300026078 Bacteria 3828
131 Ga0207702_10186634 3300026078 Bacteria 1913
132 Ga0207641_10227453 3300026088 Bacteria 1732
133 Ga0207676_10189323 3300026095 Archaea 1809
134 Ga0207674_10013264 3300026116 Bacteria 9154
135 Ga0207674_10060352 3300026116 Bacteria 3835
136 Ga0209971_1014332 3300027682 Bacteria 1878
137 Ga0207428_10000519 3300027907 Bacteria 46036
138 Ga0207428_10010874 3300027907 Bacteria 8103
139 Ga0268266_10042744 3300028379 Bacteria 3872
140 Ga0268266_10379967 3300028379 Unclassified 1332
141 Ga0268265_10015371 3300028380 Bacteria 5238
142 Ga0265338_10055101 3300028800 Bacteria 3540
143 Ga0307408_100216448 3300031548 Unclassified 1560
144 Ga0265314_10015441 3300031711 Bacteria 6060
145 Ga0307405_10010196 3300031731 Unclassified 4855
146 Ga0307410_10021336 3300031852 Unclassified 3982
147 Ga0307406_10076983 3300031901 Unclassified 2205
148 Ga0307412_10018890 3300031911 Bacteria 4160
149 Ga0307416_100056467 3300032002 Bacteria 3169
150 Ga0307414_10037920 3300032004 Unclassified 3231
151 Ga0307415_100034258 3300032126 Unclassified 3304
152 Ga0373944_0049358 3300035089 Unclassified 1323
153 Ga0373951_0005655 3300035091 Bacteria 2895
154 Ga0373935_0098052 3300035692 Unclassified 1929
155 Ga0373937_0115008 3300036401 Bacteria 2505
156 Ga0373937_0233010 3300036401 Unclassified 1734
157 Ga0373925_0063616 3300037068 Bacteria 2776
158 Ga0395900_0079627 3300037418 Bacteria 3367
159 Ga0395900_0203353 3300037418 Bacteria 2003
160 Ga0395900_0515308 3300037418 Unclassified 1145
161 Ga0395898_0063823 3300037466 Bacteria 3574
162 Ga0395898_0341909 3300037466 Bacteria 1427
163 Ga0436364_0474037 3300037853 Bacteria 105331
164 Ga0436364_0991669 3300037853 Bacteria 4868
165 Ga0436364_1540189 3300037853 Bacteria 78793
166 Ga0436365_1930035 3300039437 Unclassified 2505
167 Ga0436360_0400598 3300039438 Unclassified 1285
168 Ga0436362_1207644 3300039453 Unclassified 2780
169 Ga0439458_0002604 3300042157 Unclassified 4361
170 Ga0451577_0002781 3300042876 Bacteria 20227
171 Ga0453683_0011104 3300044673 Bacteria 5953
172 Ga0453684_0035676 3300044712 Bacteria 6870
173 Ga0466959_0013184 3300045049 Bacteria 5988
174 Ga0451576_0022098 3300045051 Bacteria 6903
175 Ga0451576_0056887 3300045051 Bacteria 4088
176 Ga0495651_0062865 3300046462 Bacteria 2840
177 Ga0495667_0107594 3300046559 Bacteria 1802
178 Ga0495604_0269033 3300047317 Unclassified 1155
179 Ga0496108_0565250 3300048911 Bacteria 992
180 Ga0496109_0000074 3300048912 Bacteria 106163
181 Ga0496110_0387446 3300048913 Bacteria 1274
182 Ga0496112_0129848 3300048915 Bacteria 2491
183 Ga0496114_0180376 3300048917 Unclassified 1844
184 Ga0496115_0007876 3300048918 Bacteria 7859
185 Ga0501298_012616 3300049521 Unclassified 1485
186 Ga0501031_0009082 3300049568 Bacteria 6464
187 Ga0501033_0027032 3300049570 Bacteria 4316
188 Ga0501033_0220309 3300049570 Bacteria 1351
189 Ga0501036_0074387 3300049572 Unclassified 2873
190 Ga0501038_0027568 3300049574 Bacteria 5053
191 Ga0501038_0075426 3300049574 Unclassified 2850
192 Ga0501039_0005843 3300049575 Bacteria 9321
193 Ga0501039_0027022 3300049575 Bacteria 4412
194 Ga0501039_0133874 3300049575 Unclassified 1946
195 Ga0501040_0001312 3300049576 Bacteria 15757
196 Ga0501040_0002674 3300049576 Bacteria 11482
197 Ga0501040_0002704 3300049576 Bacteria 11428
198 Ga0501041_0005747 3300049577 Bacteria 7246
199 Ga0501041_0022609 3300049577 Bacteria 3765
200 Ga0501041_0048348 3300049577 Bacteria 2591
201 Ga0501041_0099679 3300049577 Unclassified 1797
202 Ga0501042_0009777 3300049578 Bacteria 6408
203 Ga0501042_0072334 3300049578 Unclassified 2467
204 Ga0501043_0031756 3300049579 Unclassified 4152
205 Ga0501043_0168912 3300049579 Unclassified 1707
206 Ga0501046_0013661 3300049580 Bacteria 6867
207 Ga0501046_0049539 3300049580 Bacteria 3322
208 Ga0501046_0080703 3300049580 Unclassified 2513
209 Ga0501046_0187566 3300049580 Bacteria 1544
210 Ga0501047_0006949 3300049581 Bacteria 10632
211 Ga0501048_0084341 3300049582 Bacteria 2240
212 Ga0501068_0031577 3300049584 Bacteria 3146
213 Ga0501070_0040414 3300049586 Bacteria 3888
214 Ga0501070_0040827 3300049586 Bacteria 3868
215 Ga0501071_0002193 3300049587 Bacteria 11756
216 Ga0501072_0006428 3300049588 Bacteria 8953
217 Ga0501072_0017975 3300049588 Bacteria 5436
218 Ga0501072_0099340 3300049588 Bacteria 2314
219 Ga0501074_0017989 3300049590 Bacteria 5134
220 Ga0501074_0148249 3300049590 Bacteria 1678
221 Ga0501075_0002223 3300049591 Bacteria 12852
222 Ga0501075_0006577 3300049591 Bacteria 8004
223 Ga0501075_0010804 3300049591 Bacteria 6432
224 Ga0501076_0000016 3300049592 Bacteria 94865
225 Ga0501076_0086216 3300049592 Bacteria 2523
226 Ga0501076_0197520 3300049592 Bacteria 1642
227 Ga0501077_0002117 3300049593 Bacteria 11980
228 Ga0501077_0002905 3300049593 Bacteria 10281
229 Ga0501077_0065228 3300049593 Unclassified 2309
230 Ga0501202_017266 3300049652 Unclassified 1408
231 Ga0501207_008741 3300049654 Unclassified 1469
232 Ga0501217_000431 3300049661 Bacteria 6842
233 Ga0501223_021321 3300049663 Unclassified 1267
234 Ga0501227_005035 3300049665 Unclassified 2837
235 Ga0501233_002897 3300049668 Unclassified 3058
236 Ga0501225_0000252 3300049705 Bacteria 16787
237 Ga0501079_0007598 3300049741 Bacteria 8212
238 Ga0501079_0199423 3300049741 Unclassified 1563
239 Ga0501080_0004619 3300049742 Bacteria 12268
240 Ga0501080_0014634 3300049742 Bacteria 7226
241 Ga0501080_0115911 3300049742 Bacteria 2484
242 Ga0501081_0001344 3300049743 Bacteria 15004
243 Ga0501081_0007263 3300049743 Bacteria 7202
244 Ga0501081_0008241 3300049743 Bacteria 6766
245 Ga0501083_0128089 3300049744 Bacteria 1664
246 Ga0501035_0030318 3300049822 Bacteria 4931
247 Ga0501035_0041117 3300049822 Bacteria 4175
248 Ga0501044_0256682 3300049823 Bacteria 1687
249 Ga0501045_0009581 3300049824 Bacteria 6777
250 Ga0501045_0058606 3300049824 Bacteria 2820
251 Ga0501204_000771 3300049850 Bacteria 2936
252 nmdc:mga05p37_242930_c1 3300050507 Bacteria 2164
253 nmdc:mga05p37_38675_c1 3300050507 Bacteria 5854
254 nmdc:mga05p37_409995_c1 3300050507 Bacteria 1580
255 nmdc:mga05p37_71592_c1 3300050507 Bacteria 4265
256 nmdc:mga05p37_77804_c1 3300050507 Unclassified 4084
257 nmdc:mga09592_389234_c1 3300050508 Bacteria 1205
258 nmdc:mga06r32_267745_c1 3300050510 Bacteria 1696
259 nmdc:mga06r32_397809_c1 3300050510 Bacteria 1360
260 nmdc:mga06r32_46344_c1 3300050510 Unclassified 4148
261 nmdc:mga08y16_27643_c1 3300050511 Bacteria 5977
262 nmdc:mga08y16_464838_c1 3300050511 Unclassified 1289
263 nmdc:mga08y16_6664_c1 3300050511 Bacteria 12112
264 nmdc:mga0n895_13280_c1 3300050512 Bacteria 7424
265 nmdc:mga0rr50_159226_c1 3300050513 Bacteria 1831
266 nmdc:mga0rr50_56733_c1 3300050513 Bacteria 2927
267 nmdc:mga0rr50_70401_c1 3300050513 Unclassified 2665
268 nmdc:mga08x19_5785_c1 3300050514 Bacteria 7308
269 nmdc:mga0a205_113079_c1 3300050515 Bacteria 2614
270 nmdc:mga0a205_143323_c1 3300050515 Bacteria 2290
271 nmdc:mga0a205_24023_c1 3300050515 Bacteria 5788
272 nmdc:mga0a205_8188_c1 3300050515 Bacteria 9497
273 Ga0500610_0092744 3300053079 Bacteria 1568
274 Ga0495595_0099098 3300053084 Unclassified 1405
275 Ga0495619_0061741 3300053085 Bacteria 2494
276 Ga0495619_0209483 3300053085 Unclassified 1350
277 Ga0500641_0052431 3300053096 Bacteria 1681
278 Ga0501084_0018554 3300054114 Bacteria 5789
279 Ga0501084_0020922 3300054114 Bacteria 5455
280 Ga0501084_0138660 3300054114 Bacteria 2047
281 Ga0501084_0310608 3300054114 Bacteria 1331
282 Ga0501082_0013399 3300060353 Bacteria 7048
283 Ga0501082_0016993 3300060353 Bacteria 6265
284 Ga0501082_0163750 3300060353 Bacteria 1932
285 Ga0501082_0395547 3300060353 Bacteria 1206
286 Ga0530510_0000202 3300061734 Bacteria 36781
287 Ga0530510_0003104 3300061734 Bacteria 11399
288 Ga0530510_0018248 3300061734 Bacteria 4974

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048911 Ga0496108_0565250 Ga0496108_0565250_81_971 294
2 3300037418 Ga0395900_0515308 Ga0395900_0515308_196_1116 304
3 3300048913 Ga0496110_0387446 Ga0496110_0387446_210_1229 328
4 3300005467 Ga0070706_100427880 Ga0070706_1004278801 337
5 3300025910 Ga0207684_10370741 Ga0207684_103707411 337
6 3300025910 Ga0207684_10073163 Ga0207684_100731632 340
7 3300035089 Ga0373944_0049358 Ga0373944_0049358_61_1161 340
8 3300037068 Ga0373925_0063616 Ga0373925_0063616_772_1872 340
9 3300005327 Ga0070658_10132125 Ga0070658_101321252 341
10 3300005336 Ga0070680_100120349 Ga0070680_1001203492 341
11 3300005458 Ga0070681_10070357 Ga0070681_100703572 341
12 3300013104 Ga0157370_10207327 Ga0157370_102073272 341
13 3300025909 Ga0207705_10050983 Ga0207705_100509832 341
14 3300025912 Ga0207707_10136663 Ga0207707_101366632 341
15 3300025917 Ga0207660_10127614 Ga0207660_101276142 341
16 3300025921 Ga0207652_10282847 Ga0207652_102828471 341
17 3300036401 Ga0373937_0115008 Ga0373937_0115008_270_1379 341
18 3300005937 Ga0081455_10008056 Ga0081455_100080566 342
19 3300025922 Ga0207646_10188029 Ga0207646_101880292 343
20 3300037418 Ga0395900_0079627 Ga0395900_0079627_699_1793 343
21 3300005614 Ga0068856_100054814 Ga0068856_1000548142 344
22 3300013102 Ga0157371_10127791 Ga0157371_101277912 344
23 3300025912 Ga0207707_10249776 Ga0207707_102497761 344
24 3300025919 Ga0207657_10053719 Ga0207657_100537193 344
25 3300026078 Ga0207702_10186634 Ga0207702_101866342 344
26 3300048915 Ga0496112_0129848 Ga0496112_0129848_1035_2141 344
27 3300005439 Ga0070711_100052714 Ga0070711_1000527142 345
28 3300005614 Ga0068856_100016295 Ga0068856_1000162956 345
29 3300013104 Ga0157370_10274942 Ga0157370_102749422 345
30 3300026078 Ga0207702_10013820 Ga0207702_100138205 345
31 3300048912 Ga0496109_0000074 Ga0496109_0000074_41459_42565 345
32 3300049579 Ga0501043_0031756 Ga0501043_0031756_2553_3656 345
33 3300049580 Ga0501046_0187566 Ga0501046_0187566_409_1512 345
34 3300049581 Ga0501047_0006949 Ga0501047_0006949_2369_3472 345
35 3300049586 Ga0501070_0040414 Ga0501070_0040414_1731_2834 345
36 3300049822 Ga0501035_0030318 Ga0501035_0030318_2405_3508 345
37 3300049823 Ga0501044_0256682 Ga0501044_0256682_269_1372 345
38 3300005336 Ga0070680_100039129 Ga0070680_1000391292 346
39 3300013105 Ga0157369_10218531 Ga0157369_102185312 346
40 3300049576 Ga0501040_0001312 Ga0501040_0001312_10654_11757 346
41 3300050510 nmdc:mga06r32_397809_c1 nmdc:mga06r32_397809_c1_22_1128 346
42 3300005434 Ga0070709_10000053 Ga0070709_1000005314 347
43 3300005457 Ga0070662_100024679 Ga0070662_1000246794 347
44 3300005844 Ga0068862_100023220 Ga0068862_1000232203 347
45 3300006844 Ga0075428_100023701 Ga0075428_1000237012 347
46 3300006847 Ga0075431_100037268 Ga0075431_1000372682 347
47 3300006852 Ga0075433_10006574 Ga0075433_100065744 347
48 3300006871 Ga0075434_100379976 Ga0075434_1003799762 347
49 3300009093 Ga0105240_10000395 Ga0105240_1000039541 347
50 3300009094 Ga0111539_10000708 Ga0111539_1000070817 347
51 3300009147 Ga0114129_10165388 Ga0114129_101653881 347
52 3300013104 Ga0157370_10060614 Ga0157370_100606142 347
53 3300013105 Ga0157369_10138890 Ga0157369_101388902 347
54 3300013307 Ga0157372_10263631 Ga0157372_102636312 347
55 3300025906 Ga0207699_10000051 Ga0207699_1000005183 347
56 3300025913 Ga0207695_10002131 Ga0207695_1000213123 347
57 3300025933 Ga0207706_10030564 Ga0207706_100305643 347
58 3300025944 Ga0207661_10037665 Ga0207661_100376652 347
59 3300027907 Ga0207428_10000519 Ga0207428_1000051928 347
60 3300028380 Ga0268265_10015371 Ga0268265_100153713 347
61 3300042876 Ga0451577_0002781 Ga0451577_0002781_18811_19917 347
62 3300044673 Ga0453683_0011104 Ga0453683_0011104_2971_4077 347
63 3300044712 Ga0453684_0035676 Ga0453684_0035676_3968_5074 347
64 3300045051 Ga0451576_0056887 Ga0451576_0056887_1642_2748 347
65 3300050507 nmdc:mga05p37_409995_c1 nmdc:mga05p37_409995_c1_289_1395 347
66 3300050511 nmdc:mga08y16_6664_c1 nmdc:mga08y16_6664_c1_8467_9573 347
67 3300050515 nmdc:mga0a205_113079_c1 nmdc:mga0a205_113079_c1_42_1148 347
68 3300050515 nmdc:mga0a205_8188_c1 nmdc:mga0a205_8188_c1_5180_6286 347
69 3300054114 Ga0501084_0310608 Ga0501084_0310608_71_1177 347
70 3300039453 Ga0436362_1207644 Ga0436362_1207644_1269_2378 348
71 3300005530 Ga0070679_100278201 Ga0070679_1002782012 349
72 3300005539 Ga0068853_100028243 Ga0068853_1000282433 349
73 3300005548 Ga0070665_100356128 Ga0070665_1003561281 349
74 3300005563 Ga0068855_100221580 Ga0068855_1002215802 349
75 3300006847 Ga0075431_100058583 Ga0075431_1000585832 349
76 3300013105 Ga0157369_10001878 Ga0157369_1000187810 349
77 3300013296 Ga0157374_10004653 Ga0157374_100046535 349
78 3300013296 Ga0157374_10233821 Ga0157374_102338212 349
79 3300025916 Ga0207663_10094764 Ga0207663_100947642 349
80 3300025945 Ga0207679_10023904 Ga0207679_100239043 349
81 3300028379 Ga0268266_10379967 Ga0268266_103799672 349
82 3300048917 Ga0496114_0180376 Ga0496114_0180376_430_1536 349
83 3300048918 Ga0496115_0007876 Ga0496115_0007876_391_1497 349
84 3300053079 Ga0500610_0092744 Ga0500610_0092744_106_1212 349
85 3300053096 Ga0500641_0052431 Ga0500641_0052431_312_1418 349
86 3300021388 Ga0213875_10000029 Ga0213875_1000002981 350
87 3300037853 Ga0436364_1540189 Ga0436364_1540189_4371_5477 350
88 3300046462 Ga0495651_0062865 Ga0495651_0062865_592_1692 350
89 3300047317 Ga0495604_0269033 Ga0495604_0269033_19_1119 350
90 3300053085 Ga0495619_0061741 Ga0495619_0061741_569_1669 350
91 3300005548 Ga0070665_100088876 Ga0070665_1000888762 351
92 3300006914 Ga0075436_100007852 Ga0075436_1000078522 351
93 3300028379 Ga0268266_10042744 Ga0268266_100427442 351
94 3300031711 Ga0265314_10015441 Ga0265314_100154416 351
95 3300036401 Ga0373937_0233010 Ga0373937_0233010_477_1577 351
96 3300053084 Ga0495595_0099098 Ga0495595_0099098_100_1200 351
97 3300053085 Ga0495619_0209483 Ga0495619_0209483_194_1294 351
98 3300025928 Ga0207700_10062110 Ga0207700_100621102 352
99 3300045051 Ga0451576_0022098 Ga0451576_0022098_3218_4324 352
100 3300049575 Ga0501039_0133874 Ga0501039_0133874_720_1823 352
101 3300049577 Ga0501041_0048348 Ga0501041_0048348_1137_2240 352
102 3300049741 Ga0501079_0199423 Ga0501079_0199423_25_1128 352
103 3300007265 Ga0099794_10014040 Ga0099794_100140403 353
104 3300010159 Ga0099796_10014830 Ga0099796_100148302 353
105 3300050508 nmdc:mga09592_389234_c1 nmdc:mga09592_389234_c1_15_1121 353
106 3300050511 nmdc:mga08y16_464838_c1 nmdc:mga08y16_464838_c1_93_1196 353
107 3300005458 Ga0070681_10034760 Ga0070681_100347602 354
108 3300025912 Ga0207707_10004290 Ga0207707_1000429010 354
109 3300025927 Ga0207687_10143668 Ga0207687_101436682 354
110 3300037418 Ga0395900_0203353 Ga0395900_0203353_387_1493 354
111 3300025912 Ga0207707_10081029 Ga0207707_100810291 355
112 3300006880 Ga0075429_100058556 Ga0075429_1000585563 356
113 3300009094 Ga0111539_10120302 Ga0111539_101203022 356
114 3300027907 Ga0207428_10010874 Ga0207428_100108744 356
115 3300045049 Ga0466959_0013184 Ga0466959_0013184_4447_5550 356
116 3300050507 nmdc:mga05p37_242930_c1 nmdc:mga05p37_242930_c1_886_2052 356
117 3300050511 nmdc:mga08y16_27643_c1 nmdc:mga08y16_27643_c1_2389_3555 356
118 3300060353 Ga0501082_0395547 Ga0501082_0395547_47_1153 356
119 3300005440 Ga0070705_100153322 Ga0070705_1001533221 357
120 3300005547 Ga0070693_100017024 Ga0070693_1000170242 357
121 3300005985 Ga0081539_10000372 Ga0081539_1000037234 357
122 3300009093 Ga0105240_10157313 Ga0105240_101573132 357
123 3300013104 Ga0157370_10230943 Ga0157370_102309432 357
124 3300028800 Ga0265338_10055101 Ga0265338_100551012 357
125 3300005336 Ga0070680_100058522 Ga0070680_1000585221 358
126 3300005563 Ga0068855_100008544 Ga0068855_1000085442 358
127 3300009093 Ga0105240_10001293 Ga0105240_1000129313 358
128 3300009545 Ga0105237_10001514 Ga0105237_1000151414 358
129 3300013105 Ga0157369_10002606 Ga0157369_100026068 358
130 3300013307 Ga0157372_10005046 Ga0157372_1000504611 358
131 3300025913 Ga0207695_10001481 Ga0207695_1000148129 358
132 3300025914 Ga0207671_10076059 Ga0207671_100760592 358
133 3300025917 Ga0207660_10020359 Ga0207660_100203592 358
134 3300049850 Ga0501204_000771 Ga0501204_000771_400_1491 358
135 3300027682 Ga0209971_1014332 Ga0209971_10143321 360
136 3300035091 Ga0373951_0005655 Ga0373951_0005655_1147_2253 360
137 3300046559 Ga0495667_0107594 Ga0495667_0107594_363_1469 361
138 3300005445 Ga0070708_100131538 Ga0070708_1001315382 362
139 3300025923 Ga0207681_10235219 Ga0207681_102352191 362
140 3300049570 Ga0501033_0220309 Ga0501033_0220309_147_1241 362
141 3300049577 Ga0501041_0022609 Ga0501041_0022609_65_1159 362
142 3300049580 Ga0501046_0049539 Ga0501046_0049539_1167_2261 362
143 3300049584 Ga0501068_0031577 Ga0501068_0031577_172_1266 362
144 3300049588 Ga0501072_0017975 Ga0501072_0017975_3783_4877 362
145 3300049588 Ga0501072_0099340 Ga0501072_0099340_1038_2132 362
146 3300049591 Ga0501075_0010804 Ga0501075_0010804_5023_6117 362
147 3300049593 Ga0501077_0002905 Ga0501077_0002905_4378_5472 362
148 3300049742 Ga0501080_0115911 Ga0501080_0115911_1324_2418 362
149 3300049743 Ga0501081_0007263 Ga0501081_0007263_3698_4792 362
150 3300049744 Ga0501083_0128089 Ga0501083_0128089_534_1628 362
151 3300049824 Ga0501045_0058606 Ga0501045_0058606_1120_2214 362
152 3300054114 Ga0501084_0020922 Ga0501084_0020922_4292_5386 362
153 3300060353 Ga0501082_0016993 Ga0501082_0016993_4230_5324 362
154 3300005288 Ga0065714_10065548 Ga0065714_100655481 364
155 3300005290 Ga0065712_10068668 Ga0065712_100686681 364
156 3300005293 Ga0065715_10089698 Ga0065715_100896986 364
157 3300005334 Ga0068869_100093497 Ga0068869_1000934972 364
158 3300005564 Ga0070664_100053828 Ga0070664_1000538282 364
159 3300005577 Ga0068857_100038900 Ga0068857_1000389002 364
160 3300005577 Ga0068857_100285880 Ga0068857_1002858802 364
161 3300005618 Ga0068864_100043735 Ga0068864_1000437353 364
162 3300005841 Ga0068863_100170170 Ga0068863_1001701702 364
163 3300006237 Ga0097621_100017441 Ga0097621_1000174416 364
164 3300006358 Ga0068871_100039413 Ga0068871_1000394132 364
165 3300009101 Ga0105247_10217380 Ga0105247_102173802 364
166 3300009545 Ga0105237_10183396 Ga0105237_101833962 364
167 3300011119 Ga0105246_10257385 Ga0105246_102573851 364
168 3300025911 Ga0207654_10028824 Ga0207654_100288241 364
169 3300025942 Ga0207689_10143389 Ga0207689_101433892 364
170 3300026088 Ga0207641_10227453 Ga0207641_102274532 364
171 3300026095 Ga0207676_10189323 Ga0207676_101893232 364
172 3300026116 Ga0207674_10013264 Ga0207674_100132646 364
173 3300026116 Ga0207674_10060352 Ga0207674_100603521 364
174 3300006847 Ga0075431_100225973 Ga0075431_1002259732 365
175 3300009147 Ga0114129_10095614 Ga0114129_100956143 365
176 3300050507 nmdc:mga05p37_71592_c1 nmdc:mga05p37_71592_c1_1248_2351 365
177 3300050510 nmdc:mga06r32_267745_c1 nmdc:mga06r32_267745_c1_303_1406 365
178 3300004800 Ga0058861_12068356 Ga0058861_120683562 366
179 3300005366 Ga0070659_100041306 Ga0070659_1000413063 366
180 3300005367 Ga0070667_100289091 Ga0070667_1002890912 366
181 3300005440 Ga0070705_100034167 Ga0070705_1000341673 366
182 3300005444 Ga0070694_100225006 Ga0070694_1002250062 366
183 3300005458 Ga0070681_10000864 Ga0070681_1000086417 366
184 3300005458 Ga0070681_10014972 Ga0070681_100149723 366
185 3300005530 Ga0070679_100157869 Ga0070679_1001578692 366
186 3300005546 Ga0070696_100037487 Ga0070696_1000374872 366
187 3300005549 Ga0070704_100010340 Ga0070704_1000103402 366
188 3300005563 Ga0068855_100118759 Ga0068855_1001187592 366
189 3300005614 Ga0068856_100016889 Ga0068856_1000168892 366
190 3300006844 Ga0075428_100125939 Ga0075428_1001259392 366
191 3300006847 Ga0075431_100036862 Ga0075431_1000368622 366
192 3300006871 Ga0075434_100011782 Ga0075434_1000117825 366
193 3300006871 Ga0075434_100282729 Ga0075434_1002827292 366
194 3300006871 Ga0075434_100364114 Ga0075434_1003641142 366
195 3300006880 Ga0075429_100025221 Ga0075429_1000252213 366
196 3300006880 Ga0075429_100096352 Ga0075429_1000963522 366
197 3300007076 Ga0075435_100024627 Ga0075435_1000246273 366
198 3300007076 Ga0075435_100191173 Ga0075435_1001911732 366
199 3300009093 Ga0105240_10067626 Ga0105240_100676262 366
200 3300009093 Ga0105240_10349369 Ga0105240_103493692 366
201 3300009147 Ga0114129_10029647 Ga0114129_100296474 366
202 3300009147 Ga0114129_10032666 Ga0114129_100326663 366
203 3300009174 Ga0105241_10120471 Ga0105241_101204712 366
204 3300009545 Ga0105237_10008384 Ga0105237_1000838410 366
205 3300010375 Ga0105239_10531316 Ga0105239_105313162 366
206 3300014325 Ga0163163_10366067 Ga0163163_103660671 366
207 3300021388 Ga0213875_10000004 Ga0213875_10000004554 366
208 3300021388 Ga0213875_10065436 Ga0213875_100654362 366
209 3300025912 Ga0207707_10012887 Ga0207707_100128873 366
210 3300025939 Ga0207665_10039126 Ga0207665_100391263 366
211 3300026078 Ga0207702_10042169 Ga0207702_100421692 366
212 3300031548 Ga0307408_100216448 Ga0307408_1002164482 366
213 3300031731 Ga0307405_10010196 Ga0307405_100101964 366
214 3300031852 Ga0307410_10021336 Ga0307410_100213363 366
215 3300031901 Ga0307406_10076983 Ga0307406_100769832 366
216 3300031911 Ga0307412_10018890 Ga0307412_100188902 366
217 3300032002 Ga0307416_100056467 Ga0307416_1000564672 366
218 3300032004 Ga0307414_10037920 Ga0307414_100379202 366
219 3300032126 Ga0307415_100034258 Ga0307415_1000342581 366
220 3300035692 Ga0373935_0098052 Ga0373935_0098052_555_1655 366
221 3300037466 Ga0395898_0063823 Ga0395898_0063823_593_1699 366
222 3300037466 Ga0395898_0341909 Ga0395898_0341909_236_1357 366
223 3300037853 Ga0436364_0474037 Ga0436364_0474037_27734_28840 366
224 3300037853 Ga0436364_0991669 Ga0436364_0991669_2508_3614 366
225 3300039437 Ga0436365_1930035 Ga0436365_1930035_1173_2279 366
226 3300039438 Ga0436360_0400598 Ga0436360_0400598_30_1133 366
227 3300042157 Ga0439458_0002604 Ga0439458_0002604_3134_4240 366
228 3300049521 Ga0501298_012616 Ga0501298_012616_318_1424 366
229 3300049568 Ga0501031_0009082 Ga0501031_0009082_2189_3295 366
230 3300049570 Ga0501033_0027032 Ga0501033_0027032_228_1334 366
231 3300049572 Ga0501036_0074387 Ga0501036_0074387_1277_2383 366
232 3300049574 Ga0501038_0027568 Ga0501038_0027568_759_1865 366
233 3300049574 Ga0501038_0075426 Ga0501038_0075426_473_1579 366
234 3300049575 Ga0501039_0005843 Ga0501039_0005843_2694_3800 366
235 3300049575 Ga0501039_0027022 Ga0501039_0027022_2058_3164 366
236 3300049576 Ga0501040_0002674 Ga0501040_0002674_8093_9199 366
237 3300049576 Ga0501040_0002704 Ga0501040_0002704_924_2030 366
238 3300049577 Ga0501041_0005747 Ga0501041_0005747_5453_6559 366
239 3300049577 Ga0501041_0099679 Ga0501041_0099679_536_1642 366
240 3300049578 Ga0501042_0009777 Ga0501042_0009777_4959_6065 366
241 3300049578 Ga0501042_0072334 Ga0501042_0072334_165_1271 366
242 3300049579 Ga0501043_0168912 Ga0501043_0168912_390_1496 366
243 3300049580 Ga0501046_0013661 Ga0501046_0013661_756_1862 366
244 3300049580 Ga0501046_0080703 Ga0501046_0080703_732_1838 366
245 3300049582 Ga0501048_0084341 Ga0501048_0084341_343_1449 366
246 3300049586 Ga0501070_0040827 Ga0501070_0040827_666_1772 366
247 3300049587 Ga0501071_0002193 Ga0501071_0002193_1769_2875 366
248 3300049588 Ga0501072_0006428 Ga0501072_0006428_4435_5541 366
249 3300049590 Ga0501074_0017989 Ga0501074_0017989_3802_4908 366
250 3300049590 Ga0501074_0148249 Ga0501074_0148249_278_1384 366
251 3300049591 Ga0501075_0002223 Ga0501075_0002223_10492_11598 366
252 3300049591 Ga0501075_0006577 Ga0501075_0006577_3359_4465 366
253 3300049592 Ga0501076_0000016 Ga0501076_0000016_54690_55796 366
254 3300049592 Ga0501076_0086216 Ga0501076_0086216_344_1450 366
255 3300049592 Ga0501076_0197520 Ga0501076_0197520_156_1262 366
256 3300049593 Ga0501077_0002117 Ga0501077_0002117_1074_2180 366
257 3300049593 Ga0501077_0065228 Ga0501077_0065228_470_1576 366
258 3300049652 Ga0501202_017266 Ga0501202_017266_147_1253 366
259 3300049654 Ga0501207_008741 Ga0501207_008741_320_1426 366
260 3300049661 Ga0501217_000431 Ga0501217_000431_3663_4769 366
261 3300049663 Ga0501223_021321 Ga0501223_021321_118_1224 366
262 3300049665 Ga0501227_005035 Ga0501227_005035_1536_2642 366
263 3300049668 Ga0501233_002897 Ga0501233_002897_216_1322 366
264 3300049705 Ga0501225_0000252 Ga0501225_0000252_4793_5899 366
265 3300049741 Ga0501079_0007598 Ga0501079_0007598_5479_6585 366
266 3300049742 Ga0501080_0004619 Ga0501080_0004619_4506_5612 366
267 3300049742 Ga0501080_0014634 Ga0501080_0014634_692_1798 366
268 3300049743 Ga0501081_0001344 Ga0501081_0001344_10783_11889 366
269 3300049743 Ga0501081_0008241 Ga0501081_0008241_3706_4812 366
270 3300049822 Ga0501035_0041117 Ga0501035_0041117_2599_3705 366
271 3300049824 Ga0501045_0009581 Ga0501045_0009581_4965_6071 366
272 3300050507 nmdc:mga05p37_38675_c1 nmdc:mga05p37_38675_c1_3485_4591 366
273 3300050507 nmdc:mga05p37_77804_c1 nmdc:mga05p37_77804_c1_690_1796 366
274 3300050510 nmdc:mga06r32_46344_c1 nmdc:mga06r32_46344_c1_719_1825 366
275 3300050512 nmdc:mga0n895_13280_c1 nmdc:mga0n895_13280_c1_3454_4560 366
276 3300050513 nmdc:mga0rr50_159226_c1 nmdc:mga0rr50_159226_c1_522_1628 366
277 3300050513 nmdc:mga0rr50_56733_c1 nmdc:mga0rr50_56733_c1_1048_2154 366
278 3300050513 nmdc:mga0rr50_70401_c1 nmdc:mga0rr50_70401_c1_244_1386 366
279 3300050514 nmdc:mga08x19_5785_c1 nmdc:mga08x19_5785_c1_1836_2942 366
280 3300050515 nmdc:mga0a205_143323_c1 nmdc:mga0a205_143323_c1_414_1520 366
281 3300050515 nmdc:mga0a205_24023_c1 nmdc:mga0a205_24023_c1_1581_2687 366
282 3300054114 Ga0501084_0018554 Ga0501084_0018554_690_1796 366
283 3300054114 Ga0501084_0138660 Ga0501084_0138660_598_1704 366
284 3300060353 Ga0501082_0013399 Ga0501082_0013399_1232_2338 366
285 3300060353 Ga0501082_0163750 Ga0501082_0163750_216_1322 366
286 3300061734 Ga0530510_0000202 Ga0530510_0000202_21626_22732 366
287 3300061734 Ga0530510_0003104 Ga0530510_0003104_3171_4277 366
288 3300061734 Ga0530510_0018248 Ga0530510_0018248_471_1577 366

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

31

371

0.89

PF01061

ABC2_membrane

ABC-2 type transporter

160

343

0.88

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

17

378

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cni-assembly1.cif.gz_A-2 crystal structure of a domain of a putative abc type-2 transporter from thermotoga maritima msb8 0.7756 48 160
8i39-assembly1.cif.gz_B cryo-em structure of abscisic acid transporter atabcg25 with aba 0.7688 172 361
8i3b-assembly1.cif.gz_B cryo-em structure of abscisic acid transporter atabcg25 in nanodisc 0.757 172 364
6hbu-assembly1.cif.gz_A cryo-em structure of the abcg2 e211q mutant bound to atp and magnesium 0.7524 170 360
5do7-assembly2.cif.gz_D crystal structure of the human sterol transporter abcg5/abcg8 0.7468 172 361
ID Description Score Start End Superfamily
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.9508 41 143 3.40.1710.10
af_Q8T674_383_525_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8128 43 143 3.40.1710.10
af_P0AGH1_45_167_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8119 43 147 3.40.1710.10
af_Q55EH8_357_510_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8081 44 143 3.40.1710.10
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7882 42 162 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A2N2XCK2-F1-model_v4 deleted 0.937 168 358
AF-A0A6G3V9P6-F1-model_v4 deleted 0.9339 171 329
AF-A0A1J5NX90-F1-model_v4 Inner membrane transport permease YbhR 0.9285 171 361 GO:0043190
GO:0140359
AF-A0A348UX11-F1-model_v4 ABC-2 type transporter transmembrane domain-containing protein 0.9203 183 358 GO:0005886
GO:0140359
AF-A0A661ZEU8-F1-model_v4 Transport permease protein 0.9147 171 358 GO:0005886
GO:0140359

Feature Viewer

pLDDT pTM Quality
73.92 0.65 Medium
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Predicted Structure (AlphaFold2)

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