F388716

General Info

Members Datasets Scaffolds Average Seq Length
288 195 576 237

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0363504|Ga0395905_0363504_258_1151
Length 297
Sequence MDLDIPCSQPLETNWILPLAFDSLIQSTTKMDKMFVEWASVTLSLKAARSVMSQQQVSIQTKDGICKAWVFTPEGKGPWPGVIFYMDGFGIRPAMMEMANHIAKQGYVVLLPDLYYRHGAYGPHNPKELFAKGNYREVLGALMESTDNHKAAEDTAAFLSYLDSRDDVAGKKVGTVGFCMGGGMALTAAGFYPDRIAAAASFHGGRLATDLPTSPHLVFGKIKAEVYVAGADKDQSYPPEMAQQVEETLTKAGVRHKSEIYPDKLHGWMKPDMPVFDAQAAERGWKELFALYARTLK

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
109 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
110 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
111 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
112 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
113 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
115 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
117 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
118 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
119 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
120 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
133 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
134 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
140 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
141 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
142 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
147 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
148 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
149 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
150 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
155 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
158 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
161 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
162 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
163 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
164 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
165 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
166 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
172 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
173 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
177 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
178 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
179 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
180 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
185 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
188 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
189 2508501039 Frankia saprophytica CN3 Isolate Nodule
190 2687453737 Frankia sp. BMG5.36 Isolate Nodule
191 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
192 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
193 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
194 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
195 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.22
Metatranscriptomes 0.35
Isolates 2.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.04
Nodule 1.39
Rhizoplane 4.17
Rhizosphere 89.93
Stem 0
Stem Tuber 0
Unclassified 3.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0363504 3300037471 Bacteria 1340
2 Ga0058862_11654459 3300004803 Bacteria 1006
3 Ga0070658_10361620 3300005327 Bacteria 1243
4 Ga0070683_100110071 3300005329 Bacteria 2598
5 Ga0070680_100019209 3300005336 Bacteria 5415
6 Ga0070680_100166489 3300005336 Bacteria 1853
7 Ga0070682_100455802 3300005337 Bacteria 980
8 Ga0068868_100038074 3300005338 Bacteria 3732
9 Ga0068868_100177979 3300005338 Bacteria 1763
10 Ga0068868_100616884 3300005338 Bacteria 962
11 Ga0070691_10022796 3300005341 Bacteria 2906
12 Ga0070669_100349037 3300005353 Bacteria 1201
13 Ga0070675_100197178 3300005354 Bacteria 1746
14 Ga0070675_100409308 3300005354 Bacteria 1211
15 Ga0070703_10032571 3300005406 Bacteria 1584
16 Ga0070709_10252774 3300005434 Bacteria 1270
17 Ga0070709_10396465 3300005434 Bacteria 1029
18 Ga0070714_100352594 3300005435 Bacteria 1382
19 Ga0070714_100920182 3300005435 Bacteria 849
20 Ga0070713_100251090 3300005436 Bacteria 1613
21 Ga0070713_100701195 3300005436 Bacteria 966
22 Ga0070713_100897179 3300005436 Bacteria 852
23 Ga0070710_10011409 3300005437 Bacteria 4388
24 Ga0070710_10101054 3300005437 Bacteria 1717
25 Ga0070710_10208181 3300005437 Bacteria 1238
26 Ga0070711_100220326 3300005439 Bacteria 1474
27 Ga0070711_100234068 3300005439 Bacteria 1433
28 Ga0070705_100024285 3300005440 Bacteria 3270
29 Ga0070694_100012371 3300005444 Bacteria 5303
30 Ga0070708_100017839 3300005445 Bacteria 5930
31 Ga0070708_100079660 3300005445 Bacteria 2963
32 Ga0070663_100112849 3300005455 Bacteria 2044
33 Ga0070678_100589249 3300005456 Bacteria 991
34 Ga0068867_100357204 3300005459 Bacteria 1221
35 Ga0070706_100101359 3300005467 Bacteria 2676
36 Ga0070706_100107248 3300005467 Bacteria 2599
37 Ga0070707_100854691 3300005468 Bacteria 874
38 Ga0070698_100014132 3300005471 Bacteria 8441
39 Ga0070698_100046586 3300005471 Bacteria 4433
40 Ga0070698_100069473 3300005471 Bacteria 3536
41 Ga0070699_100000154 3300005518 Bacteria 65554
42 Ga0070699_100002563 3300005518 Bacteria 16297
43 Ga0070679_100019245 3300005530 Bacteria 6635
44 Ga0070697_100017324 3300005536 Bacteria 5667
45 Ga0070686_100046511 3300005544 Bacteria 2739
46 Ga0070696_100004751 3300005546 Bacteria 9075
47 Ga0070696_100068974 3300005546 Bacteria 2483
48 Ga0070665_100001910 3300005548 Bacteria 23557
49 Ga0070704_100004769 3300005549 Bacteria 7848
50 Ga0068855_100409110 3300005563 Bacteria 1486
51 Ga0068855_100462339 3300005563 Bacteria 1383
52 Ga0070664_100540745 3300005564 Bacteria 1077
53 Ga0068856_100006045 3300005614 Bacteria 11898
54 Ga0068856_100011511 3300005614 Bacteria 8586
55 Ga0068856_100024404 3300005614 Bacteria 5886
56 Ga0068856_100137820 3300005614 Bacteria 2446
57 Ga0068852_100146847 3300005616 Bacteria 2188
58 Ga0068859_100000175 3300005617 Bacteria 62621
59 Ga0068859_100001021 3300005617 Bacteria 28677
60 Ga0068864_100049924 3300005618 Bacteria 3600
61 Ga0068861_100070735 3300005719 Bacteria 2703
62 Ga0068861_100313966 3300005719 Bacteria 1363
63 Ga0068863_100008127 3300005841 Bacteria 10243
64 Ga0068863_100231735 3300005841 Bacteria 1781
65 Ga0068863_100364538 3300005841 Unclassified 1409
66 Ga0068858_100002876 3300005842 Bacteria 17308
67 Ga0068858_100016737 3300005842 Bacteria 6886
68 Ga0068862_100000256 3300005844 Bacteria 59069
69 Ga0068862_100701894 3300005844 Bacteria 980
70 Ga0081539_10008844 3300005985 Bacteria 8612
71 Ga0081539_10049866 3300005985 Bacteria 2372
72 Ga0070717_10140677 3300006028 Bacteria 2081
73 Ga0070717_10681703 3300006028 Bacteria 933
74 Ga0070716_100242777 3300006173 Bacteria 1222
75 Ga0070712_100082096 3300006175 Bacteria 2337
76 Ga0070712_100237906 3300006175 Bacteria 1449
77 Ga0068871_100205202 3300006358 Bacteria 1703
78 Ga0075433_10071025 3300006852 Bacteria 3060
79 Ga0075434_100089441 3300006871 Bacteria 3080
80 Ga0075434_100669872 3300006871 Bacteria 1055
81 Ga0075434_100845005 3300006871 Bacteria 931
82 Ga0075436_100368793 3300006914 Bacteria 1037
83 Ga0075436_100376155 3300006914 Bacteria 1026
84 Ga0097620_100000175 3300006931 Bacteria 62621
85 Ga0097620_100001021 3300006931 Bacteria 28677
86 Ga0075435_100051404 3300007076 Bacteria 3320
87 Ga0075435_100341571 3300007076 Unclassified 1283
88 Ga0099795_10130854 3300007788 Bacteria 1012
89 Ga0105240_10015034 3300009093 Bacteria 10538
90 Ga0105240_10038247 3300009093 Bacteria 6156
91 Ga0105240_10183872 3300009093 Bacteria 2464
92 Ga0105240_10479564 3300009093 Bacteria 1387
93 Ga0114129_10111061 3300009147 Bacteria 3783
94 Ga0105242_10533411 3300009176 Bacteria 1122
95 Ga0105248_10000072 3300009177 Bacteria 117576
96 Ga0105248_10268856 3300009177 Unclassified 1919
97 Ga0105237_10010327 3300009545 Bacteria 9946
98 Ga0105237_10062320 3300009545 Bacteria 3729
99 Ga0105237_10871745 3300009545 Bacteria 907
100 Ga0105249_10006856 3300009553 Bacteria 9934
101 Ga0105239_10037759 3300010375 Bacteria 5293
102 Ga0157374_10290733 3300013296 Bacteria 1615
103 Ga0157374_10381605 3300013296 Bacteria 1404
104 Ga0157372_10668350 3300013307 Bacteria 1209
105 Ga0163163_10129550 3300014325 Bacteria 2563
106 Ga0163163_10152945 3300014325 Bacteria 2350
107 Ga0163163_10749608 3300014325 Bacteria 1040
108 Ga0157377_10008876 3300014745 Bacteria 4916
109 Ga0157377_10154469 3300014745 Bacteria 1422
110 Ga0157379_10829519 3300014968 Unclassified 874
111 Ga0209233_1032068 3300025261 Bacteria 1219
112 Ga0209051_1005930 3300025303 Bacteria 7012
113 Ga0207692_10258804 3300025898 Bacteria 1045
114 Ga0207642_10223971 3300025899 Bacteria 1053
115 Ga0207688_10065846 3300025901 Bacteria 2048
116 Ga0207685_10081842 3300025905 Bacteria 1338
117 Ga0207685_10181115 3300025905 Bacteria 977
118 Ga0207699_10069902 3300025906 Bacteria 2142
119 Ga0207699_10497717 3300025906 Bacteria 879
120 Ga0207643_10046312 3300025908 Bacteria 2458
121 Ga0207684_10003972 3300025910 Bacteria 14162
122 Ga0207684_10090470 3300025910 Bacteria 2607
123 Ga0207684_10171267 3300025910 Bacteria 1872
124 Ga0207684_10269704 3300025910 Bacteria 1468
125 Ga0207654_10452255 3300025911 Bacteria 901
126 Ga0207707_10245544 3300025912 Bacteria 1555
127 Ga0207707_10738352 3300025912 Bacteria 824
128 Ga0207695_10014116 3300025913 Bacteria 9481
129 Ga0207695_10015171 3300025913 Bacteria 9084
130 Ga0207671_10528878 3300025914 Unclassified 940
131 Ga0207693_10076250 3300025915 Bacteria 2626
132 Ga0207693_10125463 3300025915 Bacteria 2017
133 Ga0207693_10410876 3300025915 Bacteria 1058
134 Ga0207660_10019810 3300025917 Bacteria 4504
135 Ga0207660_10087726 3300025917 Bacteria 2299
136 Ga0207662_10123225 3300025918 Bacteria 1627
137 Ga0207646_10034641 3300025922 Bacteria 4563
138 Ga0207659_10582657 3300025926 Bacteria 953
139 Ga0207687_10414365 3300025927 Bacteria 1111
140 Ga0207700_10219730 3300025928 Bacteria 1610
141 Ga0207700_10330934 3300025928 Bacteria 1322
142 Ga0207700_10651138 3300025928 Bacteria 939
143 Ga0207664_10006504 3300025929 Bacteria 8044
144 Ga0207664_10336892 3300025929 Bacteria 1333
145 Ga0207664_10361425 3300025929 Bacteria 1286
146 Ga0207706_10123695 3300025933 Bacteria 2275
147 Ga0207686_10080822 3300025934 Unclassified 2120
148 Ga0207704_10258730 3300025938 Bacteria 1311
149 Ga0207665_10018431 3300025939 Bacteria 4587
150 Ga0207711_10000521 3300025941 Bacteria 39535
151 Ga0207689_10035828 3300025942 Bacteria 4120
152 Ga0207679_10323157 3300025945 Bacteria 1337
153 Ga0207679_10787723 3300025945 Bacteria 866
154 Ga0207712_10003481 3300025961 Bacteria 9934
155 Ga0207658_10135706 3300025986 Bacteria 1984
156 Ga0207677_10040390 3300026023 Bacteria 3075
157 Ga0207703_10006534 3300026035 Bacteria 9303
158 Ga0207678_10042757 3300026067 Bacteria 3923
159 Ga0207702_10011799 3300026078 Bacteria 7276
160 Ga0207702_10013089 3300026078 Bacteria 6896
161 Ga0207641_10002519 3300026088 Bacteria 16880
162 Ga0207648_10398621 3300026089 Bacteria 1246
163 Ga0207648_10489805 3300026089 Bacteria 1124
164 Ga0207683_10002583 3300026121 Bacteria 15813
165 Ga0268266_10026254 3300028379 Bacteria 4956
166 Ga0268265_10000019 3300028380 Bacteria 285487
167 Ga0265320_10013880 3300031240 Bacteria 4615
168 Ga0307513_10000291 3300031456 Bacteria 72855
169 Ga0307416_100234499 3300032002 Bacteria 1772
170 Ga0373926_0001076 3300035083 Bacteria 8037
171 Ga0373934_0013300 3300035086 Bacteria 3109
172 Ga0373944_0002632 3300035089 Bacteria 4573
173 Ga0373949_0087895 3300035090 Bacteria 837
174 Ga0373952_0009263 3300035092 Bacteria 1882
175 Ga0373923_0031433 3300035111 Bacteria 2140
176 Ga0373923_0038257 3300035111 Bacteria 1965
177 Ga0373932_0054527 3300035112 Bacteria 1197
178 Ga0373936_0000793 3300035113 Bacteria 11177
179 Ga0373936_0108747 3300035113 Bacteria 1176
180 Ga0373945_0001677 3300035116 Bacteria 6811
181 Ga0373954_0024929 3300035118 Bacteria 2730
182 Ga0373956_0000353 3300035119 Bacteria 18653
183 Ga0373943_0001948 3300035170 Bacteria 9349
184 Ga0373943_0218917 3300035170 Bacteria 1060
185 Ga0373946_0005529 3300035171 Bacteria 4559
186 Ga0373955_0205065 3300035172 Bacteria 1174
187 Ga0373924_0023765 3300035410 Bacteria 2409
188 Ga0373935_0027737 3300035692 Bacteria 3500
189 Ga0373935_0111751 3300035692 Bacteria 1814
190 Ga0373927_0004286 3300035695 Bacteria 10012
191 Ga0373933_0035405 3300035724 Bacteria 2915
192 Ga0373947_0010786 3300035725 Bacteria 5242
193 Ga0373937_0152829 3300036401 Bacteria 2162
194 Ga0373937_0530449 3300036401 Bacteria 1118
195 Ga0373937_0810566 3300036401 Bacteria 884
196 Ga0373925_0002749 3300037068 Bacteria 13916
197 Ga0373925_0311222 3300037068 Bacteria 1273
198 Ga0436364_1154530 3300037853 Bacteria 1162
199 Ga0395901_0032924 3300038443 Bacteria 5348
200 Ga0436365_1022982 3300039437 Bacteria 1443
201 Ga0451853_2361839 3300041512 Bacteria 1348
202 Ga0466969_0043325 3300044656 Bacteria 2243
203 Ga0466966_0060964 3300044684 Bacteria 2380
204 Ga0466959_0034782 3300045049 Bacteria 3727
205 Ga0466967_0421832 3300045976 Bacteria 1300
206 Ga0495641_0011121 3300046461 Bacteria 5154
207 Ga0495651_0045083 3300046462 Bacteria 3416
208 Ga0495651_0061907 3300046462 Bacteria 2864
209 Ga0495653_0005971 3300046463 Bacteria 9968
210 Ga0495582_0025290 3300046473 Bacteria 3253
211 Ga0495664_0008950 3300046477 Bacteria 5594
212 Ga0495664_0264820 3300046477 Bacteria 1039
213 Ga0495594_0278742 3300046499 Bacteria 953
214 Ga0495608_0015619 3300046511 Bacteria 5260
215 Ga0495608_0188909 3300046511 Unclassified 1301
216 Ga0495608_0352300 3300046511 Bacteria 906
217 Ga0495628_0091197 3300046516 Bacteria 2359
218 Ga0495630_0027419 3300046517 Bacteria 4226
219 Ga0495652_0025992 3300046529 Bacteria 5173
220 Ga0495652_0027358 3300046529 Bacteria 5024
221 Ga0495652_0131123 3300046529 Bacteria 1984
222 Ga0495665_0008843 3300046531 Bacteria 5466
223 Ga0495640_0046067 3300046533 Bacteria 3024
224 Ga0495586_0109600 3300046535 Bacteria 1536
225 Ga0495621_0000655 3300046539 Bacteria 8729
226 Ga0495667_0002541 3300046559 Bacteria 12184
227 Ga0495667_0114984 3300046559 Bacteria 1738
228 Ga0495634_0125876 3300046642 Bacteria 1637
229 Ga0495634_0258232 3300046642 Bacteria 1064
230 Ga0495635_0007220 3300046663 Bacteria 7763
231 Ga0495635_0015915 3300046663 Bacteria 5254
232 Ga0495599_0267659 3300046678 Bacteria 1037
233 Ga0495669_0074960 3300046684 Bacteria 1547
234 Ga0495613_0167431 3300046689 Bacteria 1561
235 Ga0495624_0000748 3300046690 Bacteria 25547
236 Ga0495600_0036864 3300046809 Bacteria 3178
237 Ga0495600_0155099 3300046809 Bacteria 1481
238 Ga0495581_0014612 3300047315 Bacteria 4552
239 Ga0495581_0144144 3300047315 Bacteria 1390
240 Ga0495604_0221795 3300047317 Bacteria 1301
241 Ga0495674_0002706 3300047319 Bacteria 17237
242 Ga0495674_0040947 3300047319 Bacteria 4141
243 Ga0495674_0313429 3300047319 Bacteria 1279
244 Ga0495676_0314830 3300047321 Unclassified 1052
245 Ga0495680_0004872 3300047322 Bacteria 12713
246 Ga0495680_0056474 3300047322 Bacteria 3039
247 Ga0495684_0001730 3300047471 Bacteria 17554
248 Ga0495684_0012070 3300047471 Bacteria 6664
249 Ga0495684_0042265 3300047471 Bacteria 3492
250 Ga0495593_0048175 3300047673 Bacteria 2265
251 Ga0495602_0135705 3300048088 Bacteria 1955
252 Ga0495602_0271515 3300048088 Bacteria 1253
253 Ga0496100_0371941 3300048903 Bacteria 1084
254 Ga0496102_0008999 3300048905 Bacteria 8570
255 Ga0496103_0138701 3300048906 Bacteria 1554
256 Ga0496104_0695290 3300048907 Bacteria 925
257 Ga0496106_0127905 3300048909 Bacteria 1990
258 Ga0496107_0137949 3300048910 Bacteria 1802
259 Ga0496108_0167859 3300048911 Bacteria 1898
260 Ga0496108_0254907 3300048911 Bacteria 1526
261 Ga0496109_0564343 3300048912 Bacteria 1073
262 Ga0496109_0883741 3300048912 Bacteria 831
263 Ga0496110_0294876 3300048913 Bacteria 1477
264 Ga0496113_0062750 3300048916 Bacteria 2807
265 Ga0496117_0195274 3300048920 Bacteria 1148
266 Ga0496118_0065474 3300048921 Bacteria 2659
267 Ga0496118_0212975 3300048921 Bacteria 1132
268 Ga0496119_0000645 3300048922 Bacteria 47003
269 Ga0496120_0003205 3300048923 Bacteria 15203
270 Ga0501047_0001209 3300049581 Bacteria 25621
271 Ga0501044_0250981 3300049823 Bacteria 1710
272 nmdc:mga0n895_218530_c1 3300050512 Bacteria 1935
273 nmdc:mga0n895_413099_c1 3300050512 Unclassified 1364
274 nmdc:mga0rr50_193956_c1 3300050513 Bacteria 1666
275 nmdc:mga0rr50_258658_c1 3300050513 Bacteria 1448
276 nmdc:mga0rr50_403709_c1 3300050513 Bacteria 1154
277 nmdc:mga08x19_321174_c1 3300050514 Bacteria 1077
278 nmdc:mga08x19_9871_c1 3300050514 Bacteria 5722
279 nmdc:mga0a205_43975_c1 3300050515 Bacteria 4305
280 Ga0495595_0075263 3300053084 Bacteria 1601
281 Ga0500637_0175789 3300053178 Bacteria 1229
282 2508678693 2508501039 Bacteria 9978592
283 2689957680 2687453737 Bacteria 11203906
284 2723878198 2721755763 Bacteria 4464185
285 2904435867 2904434214 Bacteria 6230908
286 2935827622 2935819856 Bacteria 8261050
287 2935854925 2935847175 Bacteria 8228321
288 8055068467 8055066027 Bacteria 9479577
289 Ga0395905_0363504
290 Ga0058862_11654459
291 Ga0070658_10361620
292 Ga0070683_100110071
293 Ga0070680_100019209
294 Ga0070680_100166489
295 Ga0070682_100455802
296 Ga0068868_100038074
297 Ga0068868_100177979
298 Ga0068868_100616884
299 Ga0070691_10022796
300 Ga0070669_100349037
301 Ga0070675_100197178
302 Ga0070675_100409308
303 Ga0070703_10032571
304 Ga0070709_10252774
305 Ga0070709_10396465
306 Ga0070714_100352594
307 Ga0070714_100920182
308 Ga0070713_100251090
309 Ga0070713_100701195
310 Ga0070713_100897179
311 Ga0070710_10011409
312 Ga0070710_10101054
313 Ga0070710_10208181
314 Ga0070711_100220326
315 Ga0070711_100234068
316 Ga0070705_100024285
317 Ga0070694_100012371
318 Ga0070708_100017839
319 Ga0070708_100079660
320 Ga0070663_100112849
321 Ga0070678_100589249
322 Ga0068867_100357204
323 Ga0070706_100101359
324 Ga0070706_100107248
325 Ga0070707_100854691
326 Ga0070698_100014132
327 Ga0070698_100046586
328 Ga0070698_100069473
329 Ga0070699_100000154
330 Ga0070699_100002563
331 Ga0070679_100019245
332 Ga0070697_100017324
333 Ga0070686_100046511
334 Ga0070696_100004751
335 Ga0070696_100068974
336 Ga0070665_100001910
337 Ga0070704_100004769
338 Ga0068855_100409110
339 Ga0068855_100462339
340 Ga0070664_100540745
341 Ga0068856_100006045
342 Ga0068856_100011511
343 Ga0068856_100024404
344 Ga0068856_100137820
345 Ga0068852_100146847
346 Ga0068859_100000175
347 Ga0068859_100001021
348 Ga0068864_100049924
349 Ga0068861_100070735
350 Ga0068861_100313966
351 Ga0068863_100008127
352 Ga0068863_100231735
353 Ga0068863_100364538
354 Ga0068858_100002876
355 Ga0068858_100016737
356 Ga0068862_100000256
357 Ga0068862_100701894
358 Ga0081539_10008844
359 Ga0081539_10049866
360 Ga0070717_10140677
361 Ga0070717_10681703
362 Ga0070716_100242777
363 Ga0070712_100082096
364 Ga0070712_100237906
365 Ga0068871_100205202
366 Ga0075433_10071025
367 Ga0075434_100089441
368 Ga0075434_100669872
369 Ga0075434_100845005
370 Ga0075436_100368793
371 Ga0075436_100376155
372 Ga0097620_100000175
373 Ga0097620_100001021
374 Ga0075435_100051404
375 Ga0075435_100341571
376 Ga0099795_10130854
377 Ga0105240_10015034
378 Ga0105240_10038247
379 Ga0105240_10183872
380 Ga0105240_10479564
381 Ga0114129_10111061
382 Ga0105242_10533411
383 Ga0105248_10000072
384 Ga0105248_10268856
385 Ga0105237_10010327
386 Ga0105237_10062320
387 Ga0105237_10871745
388 Ga0105249_10006856
389 Ga0105239_10037759
390 Ga0157374_10290733
391 Ga0157374_10381605
392 Ga0157372_10668350
393 Ga0163163_10129550
394 Ga0163163_10152945
395 Ga0163163_10749608
396 Ga0157377_10008876
397 Ga0157377_10154469
398 Ga0157379_10829519
399 Ga0209233_1032068
400 Ga0209051_1005930
401 Ga0207692_10258804
402 Ga0207642_10223971
403 Ga0207688_10065846
404 Ga0207685_10081842
405 Ga0207685_10181115
406 Ga0207699_10069902
407 Ga0207699_10497717
408 Ga0207643_10046312
409 Ga0207684_10003972
410 Ga0207684_10090470
411 Ga0207684_10171267
412 Ga0207684_10269704
413 Ga0207654_10452255
414 Ga0207707_10245544
415 Ga0207707_10738352
416 Ga0207695_10014116
417 Ga0207695_10015171
418 Ga0207671_10528878
419 Ga0207693_10076250
420 Ga0207693_10125463
421 Ga0207693_10410876
422 Ga0207660_10019810
423 Ga0207660_10087726
424 Ga0207662_10123225
425 Ga0207646_10034641
426 Ga0207659_10582657
427 Ga0207687_10414365
428 Ga0207700_10219730
429 Ga0207700_10330934
430 Ga0207700_10651138
431 Ga0207664_10006504
432 Ga0207664_10336892
433 Ga0207664_10361425
434 Ga0207706_10123695
435 Ga0207686_10080822
436 Ga0207704_10258730
437 Ga0207665_10018431
438 Ga0207711_10000521
439 Ga0207689_10035828
440 Ga0207679_10323157
441 Ga0207679_10787723
442 Ga0207712_10003481
443 Ga0207658_10135706
444 Ga0207677_10040390
445 Ga0207703_10006534
446 Ga0207678_10042757
447 Ga0207702_10011799
448 Ga0207702_10013089
449 Ga0207641_10002519
450 Ga0207648_10398621
451 Ga0207648_10489805
452 Ga0207683_10002583
453 Ga0268266_10026254
454 Ga0268265_10000019
455 Ga0265320_10013880
456 Ga0307513_10000291
457 Ga0307416_100234499
458 Ga0373926_0001076
459 Ga0373934_0013300
460 Ga0373944_0002632
461 Ga0373949_0087895
462 Ga0373952_0009263
463 Ga0373923_0031433
464 Ga0373923_0038257
465 Ga0373932_0054527
466 Ga0373936_0000793
467 Ga0373936_0108747
468 Ga0373945_0001677
469 Ga0373954_0024929
470 Ga0373956_0000353
471 Ga0373943_0001948
472 Ga0373943_0218917
473 Ga0373946_0005529
474 Ga0373955_0205065
475 Ga0373924_0023765
476 Ga0373935_0027737
477 Ga0373935_0111751
478 Ga0373927_0004286
479 Ga0373933_0035405
480 Ga0373947_0010786
481 Ga0373937_0152829
482 Ga0373937_0530449
483 Ga0373937_0810566
484 Ga0373925_0002749
485 Ga0373925_0311222
486 Ga0436364_1154530
487 Ga0395901_0032924
488 Ga0436365_1022982
489 Ga0451853_2361839
490 Ga0466969_0043325
491 Ga0466966_0060964
492 Ga0466959_0034782
493 Ga0466967_0421832
494 Ga0495641_0011121
495 Ga0495651_0045083
496 Ga0495651_0061907
497 Ga0495653_0005971
498 Ga0495582_0025290
499 Ga0495664_0008950
500 Ga0495664_0264820
501 Ga0495594_0278742
502 Ga0495608_0015619
503 Ga0495608_0188909
504 Ga0495608_0352300
505 Ga0495628_0091197
506 Ga0495630_0027419
507 Ga0495652_0025992
508 Ga0495652_0027358
509 Ga0495652_0131123
510 Ga0495665_0008843
511 Ga0495640_0046067
512 Ga0495586_0109600
513 Ga0495621_0000655
514 Ga0495667_0002541
515 Ga0495667_0114984
516 Ga0495634_0125876
517 Ga0495634_0258232
518 Ga0495635_0007220
519 Ga0495635_0015915
520 Ga0495599_0267659
521 Ga0495669_0074960
522 Ga0495613_0167431
523 Ga0495624_0000748
524 Ga0495600_0036864
525 Ga0495600_0155099
526 Ga0495581_0014612
527 Ga0495581_0144144
528 Ga0495604_0221795
529 Ga0495674_0002706
530 Ga0495674_0040947
531 Ga0495674_0313429
532 Ga0495676_0314830
533 Ga0495680_0004872
534 Ga0495680_0056474
535 Ga0495684_0001730
536 Ga0495684_0012070
537 Ga0495684_0042265
538 Ga0495593_0048175
539 Ga0495602_0135705
540 Ga0495602_0271515
541 Ga0496100_0371941
542 Ga0496102_0008999
543 Ga0496103_0138701
544 Ga0496104_0695290
545 Ga0496106_0127905
546 Ga0496107_0137949
547 Ga0496108_0167859
548 Ga0496108_0254907
549 Ga0496109_0564343
550 Ga0496109_0883741
551 Ga0496110_0294876
552 Ga0496113_0062750
553 Ga0496117_0195274
554 Ga0496118_0065474
555 Ga0496118_0212975
556 Ga0496119_0000645
557 Ga0496120_0003205
558 Ga0501047_0001209
559 Ga0501044_0250981
560 nmdc:mga0n895_218530_c1
561 nmdc:mga0n895_413099_c1
562 nmdc:mga0rr50_193956_c1
563 nmdc:mga0rr50_258658_c1
564 nmdc:mga0rr50_403709_c1
565 nmdc:mga08x19_321174_c1
566 nmdc:mga08x19_9871_c1
567 nmdc:mga0a205_43975_c1
568 Ga0495595_0075263
569 Ga0500637_0175789
570 2508678693
571 2689957680
572 2723878198
573 2904435867
574 2935827622
575 2935854925
576 8055068467

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01738

DLH

Dienelactone hydrolase family

66

296

0.92

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

88

218

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zv9-assembly6.cif.gz_F 2.00 angstrom resolution crystal structure of an uncharacterized protein from escherichia coli o157:h7 str. sakai 0.9029 2 242
1ggv-assembly1.cif.gz_A crystal structure of the c123s mutant of dienelactone hydrolase (dlh) bound with the pms moiety of the protease inhibitor, phenylmethylsulfonyl fluoride (pmsf) 0.9023 4 241
1ziy-assembly1.cif.gz_A crystal structure analysis of the dienelactone hydrolase mutant (c123s) bound with the pms moiety of the protease inhibitor, phenylmethylsulfonyl fluoride (pmsf)- 1.9 a 0.9002 4 242
4u2f-assembly1.cif.gz_A crystal structure of dienelactone hydrolase b-1 variant (q35h, f38l, y64h, q110l, c123s, y137c, y145c, n154d, e199g, s208g and g211d) at 1.80 a resolution 0.8999 4 242
4u2g-assembly1.cif.gz_A crystal structure of dienelactone hydrolase b-4 variant (q35h, f38l, y64h, q76l, q110l, c123s, y137c, a141v, y145c, n154d, e199g, s208g, g211d, s233g and 237q) at 1.80 a resolution 0.8998 4 242
ID Description Score Start End Superfamily
af_I6XF92_3_241_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9843 1 238 3.40.50.1820
af_I6XF92_3_241_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9761 1 238 3.40.50.1820
af_Q54MZ9_1_255_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9437 2 242 3.40.50.1820
af_Q54MZ9_1_255_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9289 2 242 3.40.50.1820
4zv9B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9018 2 242 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1B3EAV5-F1-model_v4 Dienelactone hydrolase domain-containing protein 0.9981 127 241 GO:0016787
AF-A0A4Q3SKN5-F1-model_v4 Dienelactone hydrolase family protein 0.9905 81 241 GO:0016787
AF-A0A848DMJ8-F1-model_v4 Dienelactone hydrolase family protein 0.9872 2 242 GO:0016787
AF-A0A7W6CGP4-F1-model_v4 Carboxymethylenebutenolidase (EC 3.1.1.45) 0.9859 2 242 GO:0008806
AF-A0A1X1XZL8-F1-model_v4 Dienelactone hydrolase 0.9859 2 242 GO:0016787

Map