F388695

General Info

Members Datasets Scaffolds Average Seq Length
288 164 576 399

Family's Representative Sequence

Representative Sequence 3300035118|Ga0373954_0091551|Ga0373954_0091551_81_1418
Length 445
Sequence MAKQKFERTKPHVNIGTIGHIDHGKTTLTAAITKVLAAAQLAKYTAFDQIDKAPEERERGITIAIAHLEYQTQMRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAPDGPMPQTREHVLLARQVEVPAMVVFLNKVDMMDDEELLELVELEVRELLSKNQFPGDEVPVIRGSALKALESKGNLSREDPDAQCIWELMDAVDTYIPTPERAIDQPFLMPVEDVFGIKGRGTVATGRIERGVVKTGENIEIIGMKEETRTVVVTGVEMFQKTLDQGMAGDNVGCLLRGVERADIERGQVLAKPGSIKSHKNFLAQVYVLSKEEGGRHTPFFNGYRPQFYVRTTDVTGSIKLPEGIEMVMPGGRAFRHSRRWPHRWGRRLHQDHFVKSKALCVGHRYLPAHTIVPPSSIWLGGRMRNVSDLKLRGKPGRHVNGERIWQKVKRIALW

Samples

Sample ID Description Type Environment
1 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
6 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009828 Sorghum rhizosphere soil microbial communities in Albany, CA(condition:control)- sample E Metatranscriptome Rhizosphere
34 3300009829 Sorghum rhizosphere soil microbial communities under drought stress in Albany, CA - sample D Metatranscriptome Rhizosphere
35 3300009835 Sorghum rhizosphere soil microbial communities under drought stress in Albany, CA - sample B Metatranscriptome Rhizosphere
36 3300009850 Sorghum rhizosphere soil microbial communities in Albany, CA (condition:control)- sample C Metatranscriptome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
45 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
71 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
79 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300036534 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
86 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
96 3300041508 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaT Metatranscriptome Unclassified
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
103 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
104 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
162 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
163 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
164 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.61
Metatranscriptomes 25.35
Isolates 1.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 5.9
Rhizosphere 88.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373954_0091551 3300035118 Bacteria 1461
2 Ga0058859_11450757 3300004798 Bacteria 1439
3 Ga0058863_10017006 3300004799 Bacteria 1639
4 Ga0058863_10048735 3300004799 Bacteria 2000
5 Ga0058863_10146283 3300004799 Bacteria 3289
6 Ga0058863_11892849 3300004799 Bacteria 2392
7 Ga0058861_10070864 3300004800 Bacteria 1860
8 Ga0058861_12034586 3300004800 Bacteria 2516
9 Ga0058860_12176419 3300004801 Bacteria 1769
10 Ga0058860_12198914 3300004801 Bacteria 1522
11 Ga0058862_10074456 3300004803 Bacteria 2206
12 Ga0058862_10148495 3300004803 Bacteria 2395
13 Ga0058862_12845045 3300004803 Bacteria 1734
14 Ga0070683_100046393 3300005329 Bacteria 4014
15 Ga0070683_100078821 3300005329 Bacteria 3082
16 Ga0070690_100066376 3300005330 Bacteria 2335
17 Ga0070680_100077014 3300005336 Bacteria 2746
18 Ga0070682_100200368 3300005337 Bacteria 1408
19 Ga0070660_100151001 3300005339 Bacteria 1868
20 Ga0070691_10011580 3300005341 Bacteria 4030
21 Ga0070661_100057214 3300005344 Bacteria 2857
22 Ga0070714_100088614 3300005435 Bacteria 2708
23 Ga0070711_100161523 3300005439 Bacteria 1699
24 Ga0070708_100266564 3300005445 Bacteria 1610
25 Ga0070681_10201297 3300005458 Bacteria 1909
26 Ga0070685_10008064 3300005466 Bacteria 5398
27 Ga0070707_100244652 3300005468 Bacteria 1746
28 Ga0070684_100011158 3300005535 Bacteria 7153
29 Ga0070684_100026391 3300005535 Bacteria 4893
30 Ga0070684_100052419 3300005535 Bacteria 3548
31 Ga0070684_100052551 3300005535 Bacteria 3544
32 Ga0070684_100107147 3300005535 Bacteria 2503
33 Ga0068857_100023878 3300005577 Bacteria 5381
34 Ga0068858_100184140 3300005842 Bacteria 1972
35 Ga0081539_10047882 3300005985 Bacteria 2437
36 Ga0081539_10073936 3300005985 Bacteria 1816
37 Ga0070712_100063641 3300006175 Bacteria 2613
38 Ga0070712_100220681 3300006175 Bacteria 1501
39 Ga0075362_10034581 3300006177 Bacteria 2204
40 Ga0075428_100214088 3300006844 Bacteria 2082
41 Ga0075434_100132537 3300006871 Bacteria 2512
42 Ga0105240_10049250 3300009093 Bacteria 5320
43 Ga0105240_10295965 3300009093 Bacteria 1853
44 Ga0114129_10026347 3300009147 Bacteria 8232
45 Ga0114129_10197697 3300009147 Bacteria 2726
46 Ga0105248_10424675 3300009177 Bacteria 1497
47 Ga0105237_10058145 3300009545 Bacteria 3870
48 Ga0105238_10093097 3300009551 Bacteria 3002
49 Ga0105238_10303545 3300009551 Bacteria 1580
50 Ga0130087_1002680 3300009828 Bacteria 4443
51 Ga0130087_1054275 3300009828 Bacteria 2681
52 Ga0130086_1013083 3300009829 Bacteria 4443
53 Ga0130086_1040398 3300009829 Bacteria 2681
54 Ga0130084_1015840 3300009835 Bacteria 2681
55 Ga0130084_1019810 3300009835 Bacteria 4443
56 Ga0130085_1024066 3300009850 Bacteria 2681
57 Ga0130085_1104594 3300009850 Bacteria 4443
58 Ga0157369_10357256 3300013105 Bacteria 1517
59 Ga0157378_10172984 3300013297 Bacteria 2027
60 Ga0157372_10158734 3300013307 Bacteria 2613
61 Ga0157380_10110415 3300014326 Bacteria 2309
62 Ga0197907_10564151 3300020069 Bacteria 1969
63 Ga0206356_10127165 3300020070 Bacteria 1950
64 Ga0206356_10462065 3300020070 Bacteria 6237
65 Ga0206356_10480491 3300020070 Bacteria 2208
66 Ga0206356_10583419 3300020070 Bacteria 1777
67 Ga0206356_10961325 3300020070 Bacteria 1589
68 Ga0206356_11593079 3300020070 Bacteria 2239
69 Ga0206349_1385652 3300020075 Bacteria 3368
70 Ga0206349_1981240 3300020075 Bacteria 3485
71 Ga0206355_1126656 3300020076 Bacteria 7571
72 Ga0206355_1429921 3300020076 Bacteria 1737
73 Ga0206355_1563750 3300020076 Bacteria 1780
74 Ga0206351_10333291 3300020077 Bacteria 3645
75 Ga0206351_10509890 3300020077 Bacteria 2644
76 Ga0206351_10951427 3300020077 Bacteria 2395
77 Ga0206351_10954864 3300020077 Bacteria 1535
78 Ga0206352_10529744 3300020078 Bacteria 1907
79 Ga0206352_10540697 3300020078 Bacteria 2773
80 Ga0206352_10623334 3300020078 Bacteria 1332
81 Ga0206352_10869581 3300020078 Bacteria 2252
82 Ga0206352_10907048 3300020078 Bacteria 1497
83 Ga0206350_10631206 3300020080 Bacteria 1733
84 Ga0206350_10778320 3300020080 Bacteria 3944
85 Ga0206350_11267363 3300020080 Bacteria 2794
86 Ga0206354_10217263 3300020081 Bacteria 3199
87 Ga0206354_10265503 3300020081 Bacteria 5493
88 Ga0206354_10570077 3300020081 Bacteria 1395
89 Ga0206354_10683181 3300020081 Bacteria 2549
90 Ga0206353_11325343 3300020082 Bacteria 1783
91 Ga0206353_11804364 3300020082 Bacteria 1497
92 Ga0154015_1149043 3300020610 Bacteria 2178
93 Ga0154015_1197431 3300020610 Bacteria 3161
94 Ga0154015_1226518 3300020610 Bacteria 1779
95 Ga0154015_1289868 3300020610 Bacteria 2153
96 Ga0154015_1697241 3300020610 Bacteria 3437
97 Ga0213876_10002625 3300021384 Bacteria 10502
98 Ga0213871_10013669 3300021441 Bacteria 1912
99 Ga0224712_10005542 3300022467 Bacteria 3527
100 Ga0224712_10015806 3300022467 Bacteria 2464
101 Ga0224712_10024460 3300022467 Bacteria 2110
102 Ga0224712_10032855 3300022467 Bacteria 1894
103 Ga0224712_10035779 3300022467 Bacteria 1835
104 Ga0224712_10080716 3300022467 Bacteria 1342
105 Ga0207653_10028747 3300025885 Bacteria 1789
106 Ga0207705_10137616 3300025909 Bacteria 1821
107 Ga0207705_10158018 3300025909 Bacteria 1702
108 Ga0207707_10164387 3300025912 Bacteria 1940
109 Ga0207693_10187049 3300025915 Bacteria 1630
110 Ga0207660_10081447 3300025917 Bacteria 2379
111 Ga0207664_10295487 3300025929 Bacteria 1424
112 Ga0207670_10099369 3300025936 Bacteria 2076
113 Ga0207670_10181801 3300025936 Bacteria 1584
114 Ga0207661_10021366 3300025944 Bacteria 4848
115 Ga0207708_10032789 3300026075 Bacteria 3944
116 Ga0207708_10075848 3300026075 Bacteria 2578
117 Ga0207702_10152780 3300026078 Bacteria 2101
118 Ga0207702_10410856 3300026078 Bacteria 1307
119 Ga0207674_10004518 3300026116 Bacteria 16708
120 Ga0207674_10008751 3300026116 Bacteria 11654
121 Ga0265318_10039362 3300028577 Bacteria 1804
122 Ga0265338_10004752 3300028800 Bacteria 18169
123 Ga0265338_10189781 3300028800 Bacteria 1559
124 Ga0265320_10019834 3300031240 Bacteria 3664
125 Ga0265339_10000446 3300031249 Bacteria 32360
126 Ga0265313_10022728 3300031595 Bacteria 3394
127 Ga0316575_10018565 3300031665 Bacteria 2653
128 Ga0316579_10021482 3300031691 Bacteria 2877
129 Ga0316579_10027247 3300031691 Bacteria 2593
130 Ga0316576_10008979 3300031727 Bacteria 6424
131 Ga0316576_10042632 3300031727 Bacteria 3271
132 Ga0316576_10223922 3300031727 Bacteria 1415
133 Ga0316578_10022077 3300031728 Bacteria 3543
134 Ga0307405_10095215 3300031731 Bacteria 1982
135 Ga0316577_10002269 3300031733 Bacteria 9469
136 Ga0316577_10015968 3300031733 Bacteria 4133
137 Ga0316577_10045256 3300031733 Bacteria 2459
138 Ga0316577_10046090 3300031733 Bacteria 2436
139 Ga0316577_10048665 3300031733 Bacteria 2367
140 Ga0316577_10059835 3300031733 Bacteria 2126
141 Ga0316577_10071231 3300031733 Bacteria 1940
142 Ga0316577_10156331 3300031733 Bacteria 1285
143 Ga0316577_10158591 3300031733 Bacteria 1276
144 Ga0316577_10162089 3300031733 Bacteria 1261
145 Ga0307412_10181561 3300031911 Bacteria 1583
146 Ga0307415_100140160 3300032126 Bacteria 1845
147 Ga0316585_10032403 3300032137 Bacteria 1646
148 Ga0316585_10056779 3300032137 Bacteria 1260
149 Ga0316586_1005234 3300033527 Bacteria 1813
150 Ga0316596_1019095 3300033541 Bacteria 1738
151 Ga0316596_1021678 3300033541 Bacteria 1639
152 Ga0316596_1024508 3300033541 Bacteria 1550
153 Ga0373934_0045905 3300035086 Bacteria 1728
154 Ga0373931_0179254 3300035691 Bacteria 1254
155 Ga0373933_0109042 3300035724 Bacteria 1725
156 Ga0373937_0047833 3300036401 Bacteria 3914
157 Ga0310109_002057 3300036534 Bacteria 2183
158 Ga0316582_0004272 3300036647 Bacteria 7182
159 Ga0316582_0008470 3300036647 Bacteria 5531
160 Ga0316584_0002700 3300036712 Bacteria 11335
161 Ga0316584_0073401 3300036712 Bacteria 2564
162 Ga0316584_0105845 3300036712 Bacteria 2105
163 Ga0316584_0129504 3300036712 Bacteria 1885
164 Ga0316584_0235110 3300036712 Bacteria 1342
165 Ga0316584_0257451 3300036712 Bacteria 1273
166 Ga0373925_0104261 3300037068 Bacteria 2183
167 Ga0395900_0107530 3300037418 Bacteria 2866
168 Ga0316581_0000552 3300037588 Bacteria 7320
169 Ga0316581_0003526 3300037588 Bacteria 3901
170 Ga0316581_0010781 3300037588 Bacteria 2542
171 Ga0316581_0027712 3300037588 Bacteria 1694
172 Ga0436364_0171661 3300037853 Bacteria 48051
173 Ga0436364_0795555 3300037853 Bacteria 5775
174 Ga0436364_0814663 3300037853 Bacteria 1304
175 Ga0436364_1498842 3300037853 Bacteria 1965
176 Ga0436365_0816595 3300039437 Bacteria 19434
177 Ga0436365_1644564 3300039437 Bacteria 2797
178 Ga0436360_1106240 3300039438 Bacteria 1587
179 Ga0436363_0183979 3300039450 Bacteria 1638
180 Ga0436363_0296615 3300039450 Bacteria 1520
181 Ga0436362_0185784 3300039453 Bacteria 1291
182 Ga0436362_0733951 3300039453 Bacteria 2183
183 Ga0451852_09945 3300041508 Bacteria 1436
184 Ga0466969_0000188 3300044656 Bacteria 33204
185 Ga0466969_0010275 3300044656 Bacteria 4964
186 Ga0466972_0001071 3300044658 Bacteria 13112
187 Ga0466972_0014519 3300044658 Bacteria 3944
188 Ga0466972_0019735 3300044658 Bacteria 3370
189 Ga0466965_0002895 3300044683 Bacteria 7411
190 Ga0466966_0009082 3300044684 Bacteria 6587
191 Ga0466966_0032639 3300044684 Bacteria 3373
192 Ga0466966_0056560 3300044684 Bacteria 2481
193 Ga0466961_0009633 3300044693 Bacteria 6150
194 Ga0466961_0072989 3300044693 Bacteria 2176
195 Ga0466964_0002987 3300044706 Bacteria 6123
196 Ga0466971_0006431 3300044719 Bacteria 5103
197 Ga0466971_0092584 3300044719 Bacteria 1385
198 Ga0466968_0004594 3300044735 Bacteria 5165
199 Ga0466968_0011456 3300044735 Bacteria 3454
200 Ga0466957_0004686 3300044842 Bacteria 7649
201 Ga0466957_0029514 3300044842 Bacteria 3271
202 Ga0466957_0065093 3300044842 Bacteria 2244
203 Ga0466960_0050266 3300044901 Bacteria 2009
204 Ga0466960_0059178 3300044901 Bacteria 1873
205 Ga0466959_0005947 3300045049 Bacteria 8413
206 Ga0466959_0023287 3300045049 Bacteria 4583
207 Ga0466958_0004601 3300045836 Bacteria 7306
208 Ga0466958_0012842 3300045836 Bacteria 4753
209 Ga0466958_0098471 3300045836 Bacteria 1816
210 Ga0466967_0350737 3300045976 Bacteria 1428
211 Ga0495653_0036185 3300046463 Bacteria 3890
212 Ga0495580_0015356 3300046472 Bacteria 5777
213 Ga0495662_0002354 3300046476 Bacteria 9524
214 Ga0495664_0047230 3300046477 Bacteria 2554
215 Ga0495628_0257990 3300046516 Bacteria 1300
216 Ga0495640_0073226 3300046533 Bacteria 2294
217 Ga0495586_0009444 3300046535 Bacteria 5191
218 Ga0495624_0014707 3300046690 Bacteria 5299
219 Ga0495581_0051011 3300047315 Bacteria 2389
220 Ga0495674_0044337 3300047319 Bacteria 3954
221 Ga0495674_0083298 3300047319 Bacteria 2742
222 Ga0495684_0091159 3300047471 Bacteria 2308
223 Ga0495593_0008597 3300047673 Bacteria 5936
224 Ga0496104_0127113 3300048907 Bacteria 2448
225 Ga0496106_0241887 3300048909 Bacteria 1442
226 Ga0496109_0084293 3300048912 Bacteria 2932
227 Ga0496109_0148560 3300048912 Bacteria 2194
228 Ga0496109_0304533 3300048912 Bacteria 1503
229 Ga0496109_0343312 3300048912 Bacteria 1410
230 Ga0496110_0011469 3300048913 Bacteria 7254
231 Ga0496110_0021820 3300048913 Bacteria 5429
232 Ga0496110_0139239 3300048913 Bacteria 2194
233 Ga0496110_0142274 3300048913 Bacteria 2168
234 Ga0496110_0173722 3300048913 Bacteria 1955
235 Ga0496110_0289078 3300048913 Bacteria 1493
236 Ga0496111_0010245 3300048914 Bacteria 6280
237 Ga0496111_0098760 3300048914 Bacteria 2144
238 Ga0496112_0060856 3300048915 Bacteria 3721
239 Ga0496114_0316986 3300048917 Bacteria 1378
240 Ga0496115_0000847 3300048918 Bacteria 22314
241 Ga0501031_0147571 3300049568 Bacteria 1537
242 Ga0501036_0185706 3300049572 Bacteria 1750
243 Ga0501037_0001918 3300049573 Bacteria 15085
244 Ga0501038_0109915 3300049574 Bacteria 2284
245 Ga0501040_0013533 3300049576 Bacteria 5364
246 Ga0501041_0100735 3300049577 Bacteria 1788
247 Ga0501042_0049234 3300049578 Bacteria 3006
248 Ga0501043_0151580 3300049579 Bacteria 1814
249 Ga0501046_0125433 3300049580 Bacteria 1951
250 Ga0501048_0127940 3300049582 Bacteria 1796
251 Ga0501071_0122675 3300049587 Bacteria 1927
252 Ga0501073_0129599 3300049589 Bacteria 1748
253 Ga0501073_0173027 3300049589 Bacteria 1495
254 Ga0501074_0118662 3300049590 Bacteria 1892
255 Ga0501075_0012652 3300049591 Bacteria 6001
256 Ga0501075_0245443 3300049591 Bacteria 1365
257 Ga0501076_0032731 3300049592 Bacteria 4059
258 Ga0501076_0258960 3300049592 Bacteria 1424
259 Ga0501079_0009283 3300049741 Bacteria 7454
260 Ga0501079_0041298 3300049741 Bacteria 3560
261 Ga0501079_0069475 3300049741 Bacteria 2719
262 Ga0501079_0161081 3300049741 Bacteria 1750
263 Ga0501079_0208156 3300049741 Bacteria 1528
264 Ga0501080_0059447 3300049742 Bacteria 3557
265 Ga0501081_0010093 3300049743 Bacteria 6161
266 Ga0501081_0052571 3300049743 Bacteria 2812
267 Ga0501083_0005560 3300049744 Bacteria 8935
268 Ga0501044_0180750 3300049823 Bacteria 2076
269 nmdc:mga05p37_121258_c1 3300050507 Bacteria 3212
270 nmdc:mga05p37_136970_c1 3300050507 Bacteria 3001
271 nmdc:mga05p37_226248_c1 3300050507 Bacteria 2255
272 nmdc:mga0n895_356027_c1 3300050512 Bacteria 1482
273 nmdc:mga08x19_66225_c1 3300050514 Bacteria 1993
274 Ga0501084_0064382 3300054114 Bacteria 3069
275 Ga0501084_0186243 3300054114 Bacteria 1752
276 Ga0587070_006191 3300059491 Bacteria 1603
277 Ga0587077_006830 3300059493 Bacteria 1635
278 Ga0587088_011487 3300059508 Bacteria 1320
279 Ga0587067_003367 3300059640 Bacteria 1993
280 Ga0587068_009929 3300059641 Bacteria 1410
281 Ga0587075_009050 3300059644 Bacteria 1288
282 Ga0466962_0027458 3300061719 Bacteria 2732
283 Ga0530510_0079065 3300061734 Bacteria 2392
284 Ga0530510_0101168 3300061734 Bacteria 2108
285 Ga0530510_0173603 3300061734 Bacteria 1597
286 2688066209 2687453257 Bacteria 6784659
287 2889421722 2889415604 Bacteria 8048700
288 2920111241 2920107658 Bacteria 10042636
289 Ga0373954_0091551
290 Ga0058859_11450757
291 Ga0058863_10017006
292 Ga0058863_10048735
293 Ga0058863_10146283
294 Ga0058863_11892849
295 Ga0058861_10070864
296 Ga0058861_12034586
297 Ga0058860_12176419
298 Ga0058860_12198914
299 Ga0058862_10074456
300 Ga0058862_10148495
301 Ga0058862_12845045
302 Ga0070683_100046393
303 Ga0070683_100078821
304 Ga0070690_100066376
305 Ga0070680_100077014
306 Ga0070682_100200368
307 Ga0070660_100151001
308 Ga0070691_10011580
309 Ga0070661_100057214
310 Ga0070714_100088614
311 Ga0070711_100161523
312 Ga0070708_100266564
313 Ga0070681_10201297
314 Ga0070685_10008064
315 Ga0070707_100244652
316 Ga0070684_100011158
317 Ga0070684_100026391
318 Ga0070684_100052419
319 Ga0070684_100052551
320 Ga0070684_100107147
321 Ga0068857_100023878
322 Ga0068858_100184140
323 Ga0081539_10047882
324 Ga0081539_10073936
325 Ga0070712_100063641
326 Ga0070712_100220681
327 Ga0075362_10034581
328 Ga0075428_100214088
329 Ga0075434_100132537
330 Ga0105240_10049250
331 Ga0105240_10295965
332 Ga0114129_10026347
333 Ga0114129_10197697
334 Ga0105248_10424675
335 Ga0105237_10058145
336 Ga0105238_10093097
337 Ga0105238_10303545
338 Ga0130087_1002680
339 Ga0130087_1054275
340 Ga0130086_1013083
341 Ga0130086_1040398
342 Ga0130084_1015840
343 Ga0130084_1019810
344 Ga0130085_1024066
345 Ga0130085_1104594
346 Ga0157369_10357256
347 Ga0157378_10172984
348 Ga0157372_10158734
349 Ga0157380_10110415
350 Ga0197907_10564151
351 Ga0206356_10127165
352 Ga0206356_10462065
353 Ga0206356_10480491
354 Ga0206356_10583419
355 Ga0206356_10961325
356 Ga0206356_11593079
357 Ga0206349_1385652
358 Ga0206349_1981240
359 Ga0206355_1126656
360 Ga0206355_1429921
361 Ga0206355_1563750
362 Ga0206351_10333291
363 Ga0206351_10509890
364 Ga0206351_10951427
365 Ga0206351_10954864
366 Ga0206352_10529744
367 Ga0206352_10540697
368 Ga0206352_10623334
369 Ga0206352_10869581
370 Ga0206352_10907048
371 Ga0206350_10631206
372 Ga0206350_10778320
373 Ga0206350_11267363
374 Ga0206354_10217263
375 Ga0206354_10265503
376 Ga0206354_10570077
377 Ga0206354_10683181
378 Ga0206353_11325343
379 Ga0206353_11804364
380 Ga0154015_1149043
381 Ga0154015_1197431
382 Ga0154015_1226518
383 Ga0154015_1289868
384 Ga0154015_1697241
385 Ga0213876_10002625
386 Ga0213871_10013669
387 Ga0224712_10005542
388 Ga0224712_10015806
389 Ga0224712_10024460
390 Ga0224712_10032855
391 Ga0224712_10035779
392 Ga0224712_10080716
393 Ga0207653_10028747
394 Ga0207705_10137616
395 Ga0207705_10158018
396 Ga0207707_10164387
397 Ga0207693_10187049
398 Ga0207660_10081447
399 Ga0207664_10295487
400 Ga0207670_10099369
401 Ga0207670_10181801
402 Ga0207661_10021366
403 Ga0207708_10032789
404 Ga0207708_10075848
405 Ga0207702_10152780
406 Ga0207702_10410856
407 Ga0207674_10004518
408 Ga0207674_10008751
409 Ga0265318_10039362
410 Ga0265338_10004752
411 Ga0265338_10189781
412 Ga0265320_10019834
413 Ga0265339_10000446
414 Ga0265313_10022728
415 Ga0316575_10018565
416 Ga0316579_10021482
417 Ga0316579_10027247
418 Ga0316576_10008979
419 Ga0316576_10042632
420 Ga0316576_10223922
421 Ga0316578_10022077
422 Ga0307405_10095215
423 Ga0316577_10002269
424 Ga0316577_10015968
425 Ga0316577_10045256
426 Ga0316577_10046090
427 Ga0316577_10048665
428 Ga0316577_10059835
429 Ga0316577_10071231
430 Ga0316577_10156331
431 Ga0316577_10158591
432 Ga0316577_10162089
433 Ga0307412_10181561
434 Ga0307415_100140160
435 Ga0316585_10032403
436 Ga0316585_10056779
437 Ga0316586_1005234
438 Ga0316596_1019095
439 Ga0316596_1021678
440 Ga0316596_1024508
441 Ga0373934_0045905
442 Ga0373931_0179254
443 Ga0373933_0109042
444 Ga0373937_0047833
445 Ga0310109_002057
446 Ga0316582_0004272
447 Ga0316582_0008470
448 Ga0316584_0002700
449 Ga0316584_0073401
450 Ga0316584_0105845
451 Ga0316584_0129504
452 Ga0316584_0235110
453 Ga0316584_0257451
454 Ga0373925_0104261
455 Ga0395900_0107530
456 Ga0316581_0000552
457 Ga0316581_0003526
458 Ga0316581_0010781
459 Ga0316581_0027712
460 Ga0436364_0171661
461 Ga0436364_0795555
462 Ga0436364_0814663
463 Ga0436364_1498842
464 Ga0436365_0816595
465 Ga0436365_1644564
466 Ga0436360_1106240
467 Ga0436363_0183979
468 Ga0436363_0296615
469 Ga0436362_0185784
470 Ga0436362_0733951
471 Ga0451852_09945
472 Ga0466969_0000188
473 Ga0466969_0010275
474 Ga0466972_0001071
475 Ga0466972_0014519
476 Ga0466972_0019735
477 Ga0466965_0002895
478 Ga0466966_0009082
479 Ga0466966_0032639
480 Ga0466966_0056560
481 Ga0466961_0009633
482 Ga0466961_0072989
483 Ga0466964_0002987
484 Ga0466971_0006431
485 Ga0466971_0092584
486 Ga0466968_0004594
487 Ga0466968_0011456
488 Ga0466957_0004686
489 Ga0466957_0029514
490 Ga0466957_0065093
491 Ga0466960_0050266
492 Ga0466960_0059178
493 Ga0466959_0005947
494 Ga0466959_0023287
495 Ga0466958_0004601
496 Ga0466958_0012842
497 Ga0466958_0098471
498 Ga0466967_0350737
499 Ga0495653_0036185
500 Ga0495580_0015356
501 Ga0495662_0002354
502 Ga0495664_0047230
503 Ga0495628_0257990
504 Ga0495640_0073226
505 Ga0495586_0009444
506 Ga0495624_0014707
507 Ga0495581_0051011
508 Ga0495674_0044337
509 Ga0495674_0083298
510 Ga0495684_0091159
511 Ga0495593_0008597
512 Ga0496104_0127113
513 Ga0496106_0241887
514 Ga0496109_0084293
515 Ga0496109_0148560
516 Ga0496109_0304533
517 Ga0496109_0343312
518 Ga0496110_0011469
519 Ga0496110_0021820
520 Ga0496110_0139239
521 Ga0496110_0142274
522 Ga0496110_0173722
523 Ga0496110_0289078
524 Ga0496111_0010245
525 Ga0496111_0098760
526 Ga0496112_0060856
527 Ga0496114_0316986
528 Ga0496115_0000847
529 Ga0501031_0147571
530 Ga0501036_0185706
531 Ga0501037_0001918
532 Ga0501038_0109915
533 Ga0501040_0013533
534 Ga0501041_0100735
535 Ga0501042_0049234
536 Ga0501043_0151580
537 Ga0501046_0125433
538 Ga0501048_0127940
539 Ga0501071_0122675
540 Ga0501073_0129599
541 Ga0501073_0173027
542 Ga0501074_0118662
543 Ga0501075_0012652
544 Ga0501075_0245443
545 Ga0501076_0032731
546 Ga0501076_0258960
547 Ga0501079_0009283
548 Ga0501079_0041298
549 Ga0501079_0069475
550 Ga0501079_0161081
551 Ga0501079_0208156
552 Ga0501080_0059447
553 Ga0501081_0010093
554 Ga0501081_0052571
555 Ga0501083_0005560
556 Ga0501044_0180750
557 nmdc:mga05p37_121258_c1
558 nmdc:mga05p37_136970_c1
559 nmdc:mga05p37_226248_c1
560 nmdc:mga0n895_356027_c1
561 nmdc:mga08x19_66225_c1
562 Ga0501084_0064382
563 Ga0501084_0186243
564 Ga0587070_006191
565 Ga0587077_006830
566 Ga0587088_011487
567 Ga0587067_003367
568 Ga0587068_009929
569 Ga0587075_009050
570 Ga0466962_0027458
571 Ga0530510_0079065
572 Ga0530510_0101168
573 Ga0530510_0173603
574 2688066209
575 2889421722
576 2920111241

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03143

GTP_EFTU_D3

Elongation factor Tu C-terminal domain

305

368

0.95

PF03144

GTP_EFTU_D2

Elongation factor Tu domain 2

231

301

0.95

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

10

208

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5i4q-assembly1.cif.gz_C-2 contact-dependent inhibition system from escherichia coli nc101 - ternary cdia/cdii/ef-tu complex (domains 2 and 3) 0.971 214 399
5i4q-assembly1.cif.gz_C-2 contact-dependent inhibition system from escherichia coli nc101 - ternary cdia/cdii/ef-tu complex (domains 2 and 3) 0.9659 214 399
6wd9-assembly1.cif.gz_8 cryo-em of elongating ribosome with ef-tu*gtp elucidates trna proofreading (cognate structure iii-b) 0.9619 10 398
6wd9-assembly1.cif.gz_8 cryo-em of elongating ribosome with ef-tu*gtp elucidates trna proofreading (cognate structure iii-b) 0.9592 10 398
6wd3-assembly1.cif.gz_8 cryo-em of elongating ribosome with ef-tu*gtp elucidates trna proofreading (cognate structure ii-b1) 0.9492 2 398
ID Description Score Start End Superfamily
2y12Z02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9828 212 301 2.40.30.10
5w7qA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9821 213 305 2.40.30.10
af_G5ECM6_248_343_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9785 212 302 2.40.30.10
af_B4FVB2_262_392_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9763 212 339 2.40.30.10
af_Q7K3V6_252_380_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9734 212 332 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A2P7P1A2-F1-model_v4 deleted 0.9993 219 302
AF-A0A2H0VJM3-F1-model_v4 Elongation factor Tu (EC 3.6.5.3) 0.9957 284 399 GO:0003746
GO:0005525
GO:0005829
GO:0016787
AF-A0A523KHG2-F1-model_v4 Elongation factor Tu 0.9941 283 399 GO:0003746
GO:0005525
AF-A0A3S0V9N4-F1-model_v4 Elongation factor Tu 0.9936 293 399 GO:0003746
GO:0005525
AF-W6VXS6-F1-model_v4 deleted 0.993 214 399

Map