F388456

General Info

Members Datasets Scaffolds Average Seq Length
288 163 288 467

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100000652|Ga0070679_10000065219
Length 496
Sequence MSQWKSIAEIATAVQSGQVKASELVEQALKTIADKAEYQAIIATLDEAARARAKTIDEHIVKGEQVGRLAGVPFIAKDNFLVFGAETTAASNILKGFNAPYQSTAVNKLEAEGAICVAKANLDAFAHGSSTENSDFFTTKNPHDMERVPGGSSGGSAASVILDMVPFALGTDTGGSIRLPASFTGAVGYKPTYGLVSRSGVVAMASSTDVIGPLTRTVEDASLVLDVMSGKDPLDSTTIEKDSKGYVISTEASAERRDPEADKRDSSASLGMTVAGKKVGVIKEYVSEGLQPGVKAVIDGAIEKLKAAGADIQELSLPSLPAALAVYYIICPAEVSSNLARYDGQKFGYSAPAAQDLETSYIRTRATGFGKEAKRRIMIGTHVLSSGYYDAYYKRAQTVRTKLINEFNQAFDKVDFLLGPTSPGVAFKIGEHVADPLQMYLTDIMTVAVNLVGVPAISIPAGTSENLPVGLQLIAPQRADRALLGFAKATEEVVSV

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
46 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
47 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
48 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
88 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
89 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
90 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
95 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
96 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
97 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
140 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
141 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
146 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
147 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
148 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
149 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
150 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
151 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
152 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
153 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
154 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
155 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
156 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
159 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
160 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
161 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
162 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
163 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.96
Metatranscriptomes 1.04
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.93
Nodule 0
Rhizoplane 0.35
Rhizosphere 82.29
Stem 0
Stem Tuber 0
Unclassified 2.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000095 3300001990 Bacteria 26030
2 JGI24735J21928_10000227 3300002067 Bacteria 19785
3 JGI25406J46586_10044007 3300003203 Bacteria 1549
4 rootH2_10000244 3300003320 Bacteria 697651
5 rootH2_10341204 3300003320 Bacteria 1807
6 rootL2_10083314 3300003322 Bacteria 7698
7 rootH1_10103478 3300003323 Bacteria 6721
8 rootH1_10231201 3300003323 Bacteria 6090
9 Ga0070658_10000015 3300005327 Bacteria 230579
10 Ga0070658_10000491 3300005327 Bacteria 34335
11 Ga0070658_10004138 3300005327 Bacteria 11879
12 Ga0070658_10011767 3300005327 Bacteria 7023
13 Ga0070658_10016070 3300005327 Bacteria 5985
14 Ga0070683_100000140 3300005329 Bacteria 46747
15 Ga0070683_100000657 3300005329 Bacteria 25014
16 Ga0070666_10000102 3300005335 Bacteria 58711
17 Ga0070666_10022655 3300005335 Bacteria 4081
18 Ga0070680_100007503 3300005336 Bacteria 8317
19 Ga0070680_100017397 3300005336 Bacteria 5669
20 Ga0070680_100038808 3300005336 Bacteria 3852
21 Ga0068868_100073780 3300005338 Unclassified 2725
22 Ga0070660_100030090 3300005339 Bacteria 4071
23 Ga0070671_100000001 3300005355 Bacteria 1228151
24 Ga0070674_100017853 3300005356 Bacteria 4472
25 Ga0070674_100038341 3300005356 Bacteria 3229
26 Ga0070673_100000478 3300005364 Bacteria 21291
27 Ga0070667_100058164 3300005367 Bacteria 3268
28 Ga0070667_100198626 3300005367 Unclassified 1779
29 Ga0070714_100003680 3300005435 Bacteria 11476
30 Ga0070678_100000939 3300005456 Bacteria 14973
31 Ga0070681_10019344 3300005458 Bacteria 6815
32 Ga0070681_10209449 3300005458 Bacteria 1866
33 Ga0070685_10004084 3300005466 Bacteria 7379
34 Ga0070679_100000652 3300005530 Bacteria 29531
35 Ga0070679_100000730 3300005530 Bacteria 28399
36 Ga0070679_100002667 3300005530 Bacteria 16241
37 Ga0070679_100060289 3300005530 Bacteria 3781
38 Ga0070679_100106379 3300005530 Bacteria 2791
39 Ga0070684_100001211 3300005535 Bacteria 18536
40 Ga0070665_100065599 3300005548 Bacteria 3641
41 Ga0068855_100023126 3300005563 Bacteria 7447
42 Ga0068855_100096826 3300005563 Bacteria 3399
43 Ga0068855_100140114 3300005563 Bacteria 2758
44 Ga0068855_100260834 3300005563 Bacteria 1930
45 Ga0068857_100068498 3300005577 Bacteria 3158
46 Ga0068857_100075423 3300005577 Bacteria 3007
47 Ga0068857_100143269 3300005577 Bacteria 2161
48 Ga0068856_100000001 3300005614 Bacteria 565602
49 Ga0068856_100000866 3300005614 Bacteria 32413
50 Ga0068856_100050313 3300005614 Unclassified 4108
51 Ga0068856_100204796 3300005614 Bacteria 1988
52 Ga0068858_100070032 3300005842 Unclassified 3251
53 Ga0081455_10000003 3300005937 Bacteria 367763
54 Ga0081539_10001746 3300005985 Bacteria 34691
55 Ga0075365_10002466 3300006038 Bacteria 9086
56 Ga0075362_10000073 3300006177 Bacteria 27914
57 Ga0075369_10000051 3300006186 Bacteria 29832
58 Ga0075366_10000044 3300006195 Bacteria 45021
59 Ga0075366_10000729 3300006195 Bacteria 15645
60 Ga0075366_10117720 3300006195 Bacteria 1600
61 Ga0097621_100000370 3300006237 Bacteria 31223
62 Ga0068871_100000156 3300006358 Bacteria 45103
63 Ga0075428_100004931 3300006844 Bacteria 14819
64 Ga0105240_10000003 3300009093 Bacteria 1183681
65 Ga0105240_10003943 3300009093 Bacteria 22929
66 Ga0105245_10000001 3300009098 Bacteria 939270
67 Ga0105245_10000002 3300009098 Bacteria 634374
68 Ga0105245_10000122 3300009098 Bacteria 75415
69 Ga0105245_10001369 3300009098 Bacteria 22074
70 Ga0105247_10058741 3300009101 Unclassified 2380
71 Ga0105243_10000001 3300009148 Bacteria 1156578
72 Ga0105241_10002716 3300009174 Bacteria 13249
73 Ga0105242_10000064 3300009176 Bacteria 74150
74 Ga0105242_10003011 3300009176 Bacteria 13169
75 Ga0105242_10017900 3300009176 Bacteria 5532
76 Ga0105237_10001775 3300009545 Bacteria 27883
77 Ga0105238_10003523 3300009551 Bacteria 15595
78 Ga0105032_100200 3300009979 Bacteria 6232
79 Ga0105033_100137 3300009986 Bacteria 5545
80 Ga0105030_100807 3300009987 Bacteria 2790
81 Ga0105028_100187 3300009993 Bacteria 6678
82 Ga0105028_100394 3300009993 Bacteria 4684
83 Ga0157373_10000042 3300013100 Bacteria 113564
84 Ga0157369_10014534 3300013105 Bacteria 8882
85 Ga0157369_10081964 3300013105 Unclassified 3452
86 Ga0157374_10000031 3300013296 Bacteria 204840
87 Ga0157374_10000934 3300013296 Bacteria 25443
88 Ga0157374_10003500 3300013296 Bacteria 13203
89 Ga0157374_10119724 3300013296 Bacteria 2539
90 Ga0157378_10003107 3300013297 Bacteria 14760
91 Ga0157378_10091076 3300013297 Bacteria 2772
92 Ga0157372_10045062 3300013307 Bacteria 4890
93 Ga0157372_10092380 3300013307 Unclassified 3442
94 Ga0157372_10116756 3300013307 Bacteria 3060
95 Ga0163163_10002375 3300014325 Bacteria 15932
96 Ga0163163_10079748 3300014325 Bacteria 3272
97 Ga0157377_10003759 3300014745 Bacteria 6887
98 Ga0157379_10018902 3300014968 Bacteria 6080
99 Ga0157376_10000001 3300014969 Bacteria 842910
100 Ga0207680_10000118 3300025903 Bacteria 36782
101 Ga0207647_10000182 3300025904 Bacteria 50486
102 Ga0207647_10000458 3300025904 Bacteria 33136
103 Ga0207705_10000011 3300025909 Bacteria 517768
104 Ga0207705_10000056 3300025909 Bacteria 157554
105 Ga0207705_10004280 3300025909 Bacteria 10810
106 Ga0207705_10005114 3300025909 Bacteria 9834
107 Ga0207705_10011477 3300025909 Bacteria 6409
108 Ga0207705_10042730 3300025909 Unclassified 3255
109 Ga0207705_10112344 3300025909 Bacteria 2014
110 Ga0207654_10004434 3300025911 Bacteria 7082
111 Ga0207707_10009504 3300025912 Bacteria 8436
112 Ga0207695_10000005 3300025913 Bacteria 1196715
113 Ga0207695_10040538 3300025913 Bacteria 4990
114 Ga0207671_10000014 3300025914 Bacteria 461481
115 Ga0207660_10001756 3300025917 Bacteria 14531
116 Ga0207660_10015950 3300025917 Bacteria 4967
117 Ga0207660_10036834 3300025917 Bacteria 3403
118 Ga0207657_10017326 3300025919 Bacteria 6911
119 Ga0207657_10125941 3300025919 Bacteria 2104
120 Ga0207652_10004055 3300025921 Bacteria 11947
121 Ga0207652_10004446 3300025921 Bacteria 11420
122 Ga0207652_10011159 3300025921 Bacteria 7243
123 Ga0207652_10050633 3300025921 Bacteria 3559
124 Ga0207652_10069584 3300025921 Bacteria 3055
125 Ga0207652_10086829 3300025921 Bacteria 2743
126 Ga0207694_10000890 3300025924 Bacteria 26483
127 Ga0207687_10000001 3300025927 Bacteria 1130810
128 Ga0207687_10000030 3300025927 Bacteria 155548
129 Ga0207687_10000111 3300025927 Bacteria 58083
130 Ga0207687_10003213 3300025927 Bacteria 11065
131 Ga0207664_10001366 3300025929 Bacteria 16027
132 Ga0207644_10000001 3300025931 Bacteria 1243214
133 Ga0207686_10000001 3300025934 Bacteria 1169580
134 Ga0207686_10002274 3300025934 Bacteria 10546
135 Ga0207686_10019560 3300025934 Bacteria 3855
136 Ga0207709_10000002 3300025935 Bacteria 1171536
137 Ga0207669_10003067 3300025937 Bacteria 7192
138 Ga0207669_10003681 3300025937 Bacteria 6661
139 Ga0207661_10000021 3300025944 Bacteria 205381
140 Ga0207661_10001361 3300025944 Bacteria 16380
141 Ga0207667_10000299 3300025949 Bacteria 68595
142 Ga0207667_10006467 3300025949 Bacteria 14176
143 Ga0207667_10058909 3300025949 Bacteria 4026
144 Ga0207667_10080354 3300025949 Bacteria 3378
145 Ga0207651_10000191 3300025960 Bacteria 26637
146 Ga0207658_10195725 3300025986 Unclassified 1684
147 Ga0207703_10113403 3300026035 Unclassified 2317
148 Ga0207639_10039798 3300026041 Bacteria 3505
149 Ga0207702_10000001 3300026078 Bacteria 895738
150 Ga0207702_10001222 3300026078 Bacteria 25994
151 Ga0207702_10071736 3300026078 Bacteria 2983
152 Ga0207702_10098752 3300026078 Bacteria 2573
153 Ga0207674_10005935 3300026116 Bacteria 14443
154 Ga0207674_10091117 3300026116 Bacteria 3039
155 Ga0207675_100331212 3300026118 Bacteria 1488
156 Ga0207683_10002890 3300026121 Bacteria 14973
157 Ga0209974_10003860 3300027876 Bacteria 5371
158 Ga0268266_10027858 3300028379 Bacteria 4804
159 Ga0265337_1000001 3300028556 Bacteria 140973
160 Ga0265337_1003082 3300028556 Bacteria 7353
161 Ga0265337_1003500 3300028556 Bacteria 6786
162 Ga0265337_1010723 3300028556 Bacteria 3194
163 Ga0265337_1019560 3300028556 Bacteria 2132
164 Ga0265326_10000303 3300028558 Bacteria 21740
165 Ga0265326_10012680 3300028558 Bacteria 2472
166 Ga0265319_1006838 3300028563 Bacteria 5215
167 Ga0265319_1032214 3300028563 Bacteria 1819
168 Ga0265334_10000032 3300028573 Bacteria 107258
169 Ga0265334_10000049 3300028573 Bacteria 89091
170 Ga0265334_10003503 3300028573 Bacteria 7115
171 Ga0265334_10021393 3300028573 Bacteria 2641
172 Ga0265334_10033912 3300028573 Bacteria 2029
173 Ga0265322_10008790 3300028654 Bacteria 2939
174 Ga0265322_10009967 3300028654 Bacteria 2755
175 Ga0265336_10000047 3300028666 Bacteria 123576
176 Ga0265336_10002965 3300028666 Bacteria 6786
177 Ga0265338_10000003 3300028800 Bacteria 733923
178 Ga0265338_10000039 3300028800 Bacteria 236135
179 Ga0265338_10000054 3300028800 Bacteria 207383
180 Ga0265338_10000178 3300028800 Bacteria 118345
181 Ga0265338_10000192 3300028800 Bacteria 115195
182 Ga0265338_10006957 3300028800 Bacteria 14220
183 Ga0265338_10010726 3300028800 Bacteria 10697
184 Ga0265338_10014462 3300028800 Bacteria 8784
185 Ga0265338_10018872 3300028800 Bacteria 7353
186 Ga0265338_10019892 3300028800 Bacteria 7092
187 Ga0265338_10021203 3300028800 Bacteria 6786
188 Ga0265338_10030219 3300028800 Bacteria 5346
189 Ga0265338_10032976 3300028800 Bacteria 5039
190 Ga0265338_10046753 3300028800 Bacteria 3962
191 Ga0265338_10188092 3300028800 Bacteria 1567
192 Ga0265324_10002299 3300029957 Bacteria 9937
193 Ga0265324_10015272 3300029957 Bacteria 2826
194 Ga0265328_10030965 3300031239 Bacteria 1991
195 Ga0265329_10020452 3300031242 Bacteria 2235
196 Ga0265340_10000077 3300031247 Bacteria 47065
197 Ga0265339_10025740 3300031249 Bacteria 3373
198 Ga0265339_10047384 3300031249 Bacteria 2360
199 Ga0265331_10013786 3300031250 Bacteria 4334
200 Ga0265327_10000017 3300031251 Bacteria 445264
201 Ga0265327_10000961 3300031251 Bacteria 41308
202 Ga0265327_10006126 3300031251 Bacteria 9731
203 Ga0265327_10059402 3300031251 Bacteria 1958
204 Ga0265316_10023833 3300031344 Bacteria 5140
205 Ga0265313_10019928 3300031595 Bacteria 3716
206 Ga0307516_10020797 3300031730 Bacteria 6772
207 Ga0316593_10009956 3300032168 Bacteria 2708
208 Ga0316592_1005226 3300033524 Bacteria 2455
209 Ga0316596_1000670 3300033541 Bacteria 6162
210 Ga0395900_0000232 3300037418 Bacteria 87268
211 Ga0395900_0032332 3300037418 Bacteria 5380
212 Ga0395898_0045101 3300037466 Bacteria 4334
213 Ga0395905_0004532 3300037471 Bacteria 14388
214 Ga0395905_0030131 3300037471 Bacteria 5114
215 Ga0395905_0117015 3300037471 Unclassified 2505
216 Ga0395901_0000680 3300038443 Bacteria 39129
217 Ga0395901_0008203 3300038443 Bacteria 10554
218 Ga0395901_0012775 3300038443 Bacteria 8518
219 Ga0395901_0014544 3300038443 Bacteria 8000
220 Ga0395901_0097574 3300038443 Bacteria 3081
221 Ga0451576_0002629 3300045051 Bacteria 26291
222 Ga0451576_0157249 3300045051 Bacteria 2371
223 Ga0495629_0016447 3300046459 Bacteria 5311
224 Ga0495583_0006209 3300046506 Bacteria 7865
225 Ga0495622_0000082 3300046557 Bacteria 85266
226 Ga0495658_0002154 3300046683 Bacteria 9967
227 Ga0495600_0007672 3300046809 Bacteria 6612
228 Ga0495672_0000129 3300047320 Bacteria 112879
229 Ga0495672_0032676 3300047320 Bacteria 3234
230 Ga0496100_0042037 3300048903 Bacteria 2917
231 Ga0496125_0040359 3300048928 Bacteria 4006
232 Ga0501031_0000163 3300049568 Bacteria 38332
233 Ga0501032_0001428 3300049569 Bacteria 18969
234 Ga0501034_0001444 3300049571 Bacteria 31518
235 Ga0501034_0002719 3300049571 Bacteria 20818
236 Ga0501034_0005935 3300049571 Bacteria 13240
237 Ga0501036_0017802 3300049572 Bacteria 5949
238 Ga0501037_0000121 3300049573 Bacteria 72862
239 Ga0501038_0006520 3300049574 Bacteria 10798
240 Ga0501043_0151538 3300049579 Bacteria 1814
241 Ga0501046_0000138 3300049580 Bacteria 77052
242 Ga0501048_0000361 3300049582 Bacteria 31413
243 Ga0501070_0043987 3300049586 Bacteria 3716
244 Ga0501070_0044696 3300049586 Bacteria 3684
245 Ga0501073_0049982 3300049589 Bacteria 2931
246 Ga0501083_0107174 3300049744 Unclassified 1839
247 Ga0501035_0000033 3300049822 Bacteria 175087
248 Ga0501035_0000801 3300049822 Bacteria 33495
249 Ga0501044_0011388 3300049823 Bacteria 9633
250 Ga0501044_0064200 3300049823 Bacteria 3749
251 nmdc:mga03683_1164_c1 3300050489 Bacteria 7733
252 nmdc:mga03683_20_c3 3300050489 Bacteria 29488
253 nmdc:mga00v17_53585_c1 3300050491 Bacteria 2459
254 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
255 nmdc:mga0yw44_559_c1 3300050492 Bacteria 13438
256 nmdc:mga0k408_17_c2 3300050493 Bacteria 97852
257 nmdc:mga0k408_65301_c1 3300050493 Bacteria 2118
258 nmdc:mga08y16_10036_c1 3300050511 Bacteria 9939
259 Ga0500610_0000001 3300053079 Bacteria 185468
260 Ga0500643_000010 3300053087 Bacteria 408084
261 Ga0500643_000022 3300053087 Bacteria 277519
262 Ga0500643_002381 3300053087 Bacteria 9797
263 Ga0500644_0000006 3300053088 Bacteria 143304
264 Ga0500646_0000316 3300053090 Bacteria 14807
265 Ga0500583_0049091 3300053092 Bacteria 1951
266 Ga0500651_0000045 3300053093 Bacteria 85481
267 Ga0500651_0004386 3300053093 Bacteria 7887
268 Ga0500566_0000001 3300053094 Bacteria 1101031
269 Ga0500650_0000001 3300053098 Bacteria 818797
270 Ga0500555_000001 3300053103 Bacteria 1353713
271 Ga0500555_000002 3300053103 Bacteria 1314346
272 Ga0500556_0000295 3300053104 Bacteria 38375
273 Ga0500562_014045 3300053108 Bacteria 2049
274 Ga0500593_000001 3300053117 Bacteria 784404
275 Ga0500594_0000001 3300053118 Bacteria 1178472
276 Ga0500614_000180 3300053123 Bacteria 16268
277 Ga0500628_001126 3300053129 Bacteria 4670
278 Ga0500642_0011549 3300053130 Unclassified 3164
279 Ga0500652_000020 3300053131 Bacteria 119198
280 Ga0500655_001727 3300053133 Bacteria 4101
281 Ga0500559_0006658 3300053136 Bacteria 5195
282 Ga0500561_0000001 3300053137 Bacteria 957685
283 Ga0500579_008009 3300053143 Bacteria 6653
284 Ga0500589_000016 3300053147 Bacteria 107090
285 Ga0500603_004646 3300053150 Bacteria 2941
286 Ga0500603_038093 3300053150 Bacteria 1271
287 Ga0500570_000005 3300053724 Bacteria 132994
288 Ga0500611_000237 3300053727 Bacteria 6281

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053150 Ga0500603_038093 Ga0500603_038093_18_1238 394
2 3300053092 Ga0500583_0049091 Ga0500583_0049091_238_1455 397
3 3300005356 Ga0070674_100038341 Ga0070674_1000383413 400
4 3300025904 Ga0207647_10000182 Ga0207647_1000018232 400
5 3300025937 Ga0207669_10003067 Ga0207669_100030673 400
6 3300026118 Ga0207675_100331212 Ga0207675_1003312122 414
7 3300048928 Ga0496125_0040359 Ga0496125_0040359_1130_2593 431
8 3300005577 Ga0068857_100075423 Ga0068857_1000754233 434
9 3300026116 Ga0207674_10091117 Ga0207674_100911172 434
10 3300005435 Ga0070714_100003680 Ga0070714_1000036808 437
11 3300025929 Ga0207664_10001366 Ga0207664_100013664 437
12 3300028800 Ga0265338_10030219 Ga0265338_100302194 444
13 3300049744 Ga0501083_0107174 Ga0501083_0107174_147_1577 444
14 3300006177 Ga0075362_10000073 Ga0075362_100000731 445
15 3300050489 nmdc:mga03683_20_c3 nmdc:mga03683_20_c3_74_1495 445
16 3300050492 nmdc:mga0yw44_2_c1 nmdc:mga0yw44_2_c1_219507_220928 445
17 3300005335 Ga0070666_10000102 Ga0070666_1000010235 447
18 3300005367 Ga0070667_100058164 Ga0070667_1000581643 447
19 3300025903 Ga0207680_10000118 Ga0207680_1000011840 447
20 3300009993 Ga0105028_100394 Ga0105028_1003946 448
21 3300013105 Ga0157369_10014534 Ga0157369_100145348 449
22 3300031730 Ga0307516_10020797 Ga0307516_100207978 452
23 3300046506 Ga0495583_0006209 Ga0495583_0006209_3626_5062 454
24 3300025917 Ga0207660_10036834 Ga0207660_100368343 455
25 3300025921 Ga0207652_10086829 Ga0207652_100868294 455
26 3300032168 Ga0316593_10009956 Ga0316593_100099562 455
27 3300033524 Ga0316592_1005226 Ga0316592_10052261 455
28 3300033541 Ga0316596_1000670 Ga0316596_10006704 455
29 3300049586 Ga0501070_0044696 Ga0501070_0044696_1077_2483 455
30 3300005327 Ga0070658_10000491 Ga0070658_100004914 456
31 3300013307 Ga0157372_10045062 Ga0157372_100450623 456
32 3300014968 Ga0157379_10018902 Ga0157379_100189026 456
33 3300025909 Ga0207705_10004280 Ga0207705_100042803 456
34 3300003203 JGI25406J46586_10044007 JGI25406J46586_100440071 457
35 3300005336 Ga0070680_100007503 Ga0070680_1000075033 457
36 3300005985 Ga0081539_10001746 Ga0081539_1000174612 457
37 3300009545 Ga0105237_10001775 Ga0105237_1000177526 457
38 3300009979 Ga0105032_100200 Ga0105032_1002004 457
39 3300013105 Ga0157369_10081964 Ga0157369_100819643 457
40 3300013307 Ga0157372_10092380 Ga0157372_100923805 457
41 3300025914 Ga0207671_10000014 Ga0207671_10000014179 457
42 3300025917 Ga0207660_10015950 Ga0207660_100159504 457
43 3300028654 Ga0265322_10008790 Ga0265322_100087903 457
44 3300028800 Ga0265338_10014462 Ga0265338_100144623 457
45 3300031239 Ga0265328_10030965 Ga0265328_100309652 457
46 3300031242 Ga0265329_10020452 Ga0265329_100204522 457
47 3300031250 Ga0265331_10013786 Ga0265331_100137863 457
48 3300031251 Ga0265327_10059402 Ga0265327_100594022 457
49 3300005327 Ga0070658_10016070 Ga0070658_100160702 458
50 3300005336 Ga0070680_100038808 Ga0070680_1000388084 458
51 3300005339 Ga0070660_100030090 Ga0070660_1000300904 458
52 3300005458 Ga0070681_10209449 Ga0070681_102094492 458
53 3300005530 Ga0070679_100002667 Ga0070679_10000266710 458
54 3300005530 Ga0070679_100060289 Ga0070679_1000602893 458
55 3300005563 Ga0068855_100023126 Ga0068855_1000231267 458
56 3300005577 Ga0068857_100068498 Ga0068857_1000684983 458
57 3300013307 Ga0157372_10116756 Ga0157372_101167564 458
58 3300025909 Ga0207705_10112344 Ga0207705_101123442 458
59 3300025912 Ga0207707_10009504 Ga0207707_100095049 458
60 3300025917 Ga0207660_10001756 Ga0207660_100017563 458
61 3300025919 Ga0207657_10017326 Ga0207657_100173266 458
62 3300025919 Ga0207657_10125941 Ga0207657_101259411 458
63 3300025921 Ga0207652_10004055 Ga0207652_100040554 458
64 3300025921 Ga0207652_10011159 Ga0207652_100111593 458
65 3300025949 Ga0207667_10006467 Ga0207667_100064673 458
66 3300025949 Ga0207667_10058909 Ga0207667_100589094 458
67 3300026116 Ga0207674_10005935 Ga0207674_100059353 458
68 3300027876 Ga0209974_10003860 Ga0209974_100038605 458
69 3300045051 Ga0451576_0002629 Ga0451576_0002629_22942_24378 458
70 3300049571 Ga0501034_0002719 Ga0501034_0002719_356_1783 458
71 3300049572 Ga0501036_0017802 Ga0501036_0017802_548_1975 458
72 3300049822 Ga0501035_0000033 Ga0501035_0000033_96829_98256 458
73 3300049823 Ga0501044_0064200 Ga0501044_0064200_1206_2633 458
74 3300003323 rootH1_10231201 rootH1_102312016 459
75 3300005327 Ga0070658_10011767 Ga0070658_100117674 459
76 3300005563 Ga0068855_100140114 Ga0068855_1001401143 459
77 3300005563 Ga0068855_100260834 Ga0068855_1002608342 459
78 3300009551 Ga0105238_10003523 Ga0105238_1000352315 459
79 3300009993 Ga0105028_100187 Ga0105028_1001878 459
80 3300014325 Ga0163163_10079748 Ga0163163_100797484 459
81 3300025909 Ga0207705_10011477 Ga0207705_100114776 459
82 3300025924 Ga0207694_10000890 Ga0207694_1000089013 459
83 3300025949 Ga0207667_10000299 Ga0207667_1000029965 459
84 3300028556 Ga0265337_1000001 Ga0265337_1000001149 459
85 3300028558 Ga0265326_10012680 Ga0265326_100126802 459
86 3300028563 Ga0265319_1006838 Ga0265319_10068386 459
87 3300028563 Ga0265319_1032214 Ga0265319_10322142 459
88 3300028573 Ga0265334_10021393 Ga0265334_100213934 459
89 3300028573 Ga0265334_10033912 Ga0265334_100339122 459
90 3300028654 Ga0265322_10009967 Ga0265322_100099673 459
91 3300028800 Ga0265338_10000054 Ga0265338_10000054209 459
92 3300028800 Ga0265338_10006957 Ga0265338_100069577 459
93 3300028800 Ga0265338_10019892 Ga0265338_100198921 459
94 3300028800 Ga0265338_10032976 Ga0265338_100329763 459
95 3300029957 Ga0265324_10015272 Ga0265324_100152723 459
96 3300031249 Ga0265339_10025740 Ga0265339_100257402 459
97 3300031344 Ga0265316_10023833 Ga0265316_100238333 459
98 3300003320 rootH2_10341204 rootH2_103412041 460
99 3300003322 rootL2_10083314 rootL2_100833144 460
100 3300005327 Ga0070658_10000015 Ga0070658_1000001585 460
101 3300005335 Ga0070666_10022655 Ga0070666_100226554 460
102 3300005336 Ga0070680_100017397 Ga0070680_1000173974 460
103 3300005338 Ga0068868_100073780 Ga0068868_1000737804 460
104 3300005367 Ga0070667_100198626 Ga0070667_1001986261 460
105 3300005530 Ga0070679_100000730 Ga0070679_10000073028 460
106 3300005530 Ga0070679_100106379 Ga0070679_1001063792 460
107 3300005614 Ga0068856_100050313 Ga0068856_1000503137 460
108 3300005842 Ga0068858_100070032 Ga0068858_1000700322 460
109 3300013296 Ga0157374_10003500 Ga0157374_1000350012 460
110 3300013297 Ga0157378_10091076 Ga0157378_100910762 460
111 3300025909 Ga0207705_10000011 Ga0207705_10000011260 460
112 3300025909 Ga0207705_10042730 Ga0207705_100427304 460
113 3300025921 Ga0207652_10050633 Ga0207652_100506333 460
114 3300025921 Ga0207652_10069584 Ga0207652_100695843 460
115 3300025986 Ga0207658_10195725 Ga0207658_101957251 460
116 3300026035 Ga0207703_10113403 Ga0207703_101134032 460
117 3300026078 Ga0207702_10071736 Ga0207702_100717361 460
118 3300028573 Ga0265334_10000032 Ga0265334_10000032112 460
119 3300028800 Ga0265338_10000192 Ga0265338_1000019280 460
120 3300031247 Ga0265340_10000077 Ga0265340_1000007720 460
121 3300031251 Ga0265327_10000961 Ga0265327_1000096131 460
122 3300037418 Ga0395900_0000232 Ga0395900_0000232_38768_40195 460
123 3300037466 Ga0395898_0045101 Ga0395898_0045101_2518_3939 460
124 3300037471 Ga0395905_0004532 Ga0395905_0004532_1028_2449 460
125 3300038443 Ga0395901_0000680 Ga0395901_0000680_14780_16207 460
126 3300038443 Ga0395901_0014544 Ga0395901_0014544_1431_2852 460
127 3300053079 Ga0500610_0000001 Ga0500610_0000001_124916_126349 460
128 3300053087 Ga0500643_002381 Ga0500643_002381_5964_7397 460
129 3300053088 Ga0500644_0000006 Ga0500644_0000006_114285_115718 460
130 3300053103 Ga0500555_000002 Ga0500555_000002_541991_543424 460
131 3300053131 Ga0500652_000020 Ga0500652_000020_30046_31479 460
132 3300053724 Ga0500570_000005 Ga0500570_000005_74769_76193 460
133 3300003320 rootH2_10000244 rootH2_10000244421 461
134 3300003323 rootH1_10103478 rootH1_101034785 461
135 3300005327 Ga0070658_10004138 Ga0070658_100041389 461
136 3300005355 Ga0070671_100000001 Ga0070671_100000001530 461
137 3300005577 Ga0068857_100143269 Ga0068857_1001432692 461
138 3300005937 Ga0081455_10000003 Ga0081455_10000003350 461
139 3300006186 Ga0075369_10000051 Ga0075369_1000005132 461
140 3300009101 Ga0105247_10058741 Ga0105247_100587412 461
141 3300009986 Ga0105033_100137 Ga0105033_1001375 461
142 3300025904 Ga0207647_10000458 Ga0207647_1000045841 461
143 3300025909 Ga0207705_10005114 Ga0207705_100051143 461
144 3300025931 Ga0207644_10000001 Ga0207644_10000001906 461
145 3300031251 Ga0265327_10006126 Ga0265327_100061265 461
146 3300037418 Ga0395900_0032332 Ga0395900_0032332_1648_3072 461
147 3300037471 Ga0395905_0117015 Ga0395905_0117015_869_2293 461
148 3300038443 Ga0395901_0008203 Ga0395901_0008203_7603_9027 461
149 3300038443 Ga0395901_0012775 Ga0395901_0012775_5603_7027 461
150 3300038443 Ga0395901_0097574 Ga0395901_0097574_305_1729 461
151 3300046459 Ga0495629_0016447 Ga0495629_0016447_3869_5293 461
152 3300046557 Ga0495622_0000082 Ga0495622_0000082_33744_35168 461
153 3300046683 Ga0495658_0002154 Ga0495658_0002154_3942_5366 461
154 3300046809 Ga0495600_0007672 Ga0495600_0007672_804_2228 461
155 3300047320 Ga0495672_0000129 Ga0495672_0000129_37120_38577 461
156 3300047320 Ga0495672_0032676 Ga0495672_0032676_663_2084 461
157 3300048903 Ga0496100_0042037 Ga0496100_0042037_305_1729 461
158 3300049568 Ga0501031_0000163 Ga0501031_0000163_25289_26716 461
159 3300049569 Ga0501032_0001428 Ga0501032_0001428_9690_11117 461
160 3300049571 Ga0501034_0005935 Ga0501034_0005935_4309_5736 461
161 3300049573 Ga0501037_0000121 Ga0501037_0000121_51900_53327 461
162 3300049574 Ga0501038_0006520 Ga0501038_0006520_2922_4349 461
163 3300049579 Ga0501043_0151538 Ga0501043_0151538_181_1608 461
164 3300049580 Ga0501046_0000138 Ga0501046_0000138_73501_74928 461
165 3300049582 Ga0501048_0000361 Ga0501048_0000361_2991_4418 461
166 3300049586 Ga0501070_0043987 Ga0501070_0043987_309_1736 461
167 3300049589 Ga0501073_0049982 Ga0501073_0049982_277_1704 461
168 3300049822 Ga0501035_0000801 Ga0501035_0000801_11274_12701 461
169 3300049823 Ga0501044_0011388 Ga0501044_0011388_5760_7187 461
170 3300053093 Ga0500651_0000045 Ga0500651_0000045_30081_31511 461
171 3300053093 Ga0500651_0004386 Ga0500651_0004386_1952_3382 461
172 3300053094 Ga0500566_0000001 Ga0500566_0000001_611315_612739 461
173 3300053103 Ga0500555_000001 Ga0500555_000001_694164_695588 461
174 3300053123 Ga0500614_000180 Ga0500614_000180_4051_5481 461
175 3300053136 Ga0500559_0006658 Ga0500559_0006658_2812_4236 461
176 3300005614 Ga0068856_100000001 Ga0068856_100000001223 462
177 3300009098 Ga0105245_10000001 Ga0105245_10000001394 462
178 3300009176 Ga0105242_10003011 Ga0105242_1000301114 462
179 3300025927 Ga0207687_10000030 Ga0207687_1000003045 462
180 3300025934 Ga0207686_10002274 Ga0207686_100022742 462
181 3300026078 Ga0207702_10000001 Ga0207702_10000001772 462
182 3300045051 Ga0451576_0157249 Ga0451576_0157249_532_2004 462
183 3300049571 Ga0501034_0001444 Ga0501034_0001444_10664_12082 462
184 3300053129 Ga0500628_001126 Ga0500628_001126_3089_4525 462
185 3300028556 Ga0265337_1003082 Ga0265337_10030822 463
186 3300028556 Ga0265337_1003500 Ga0265337_10035007 463
187 3300028573 Ga0265334_10003503 Ga0265334_100035033 463
188 3300028666 Ga0265336_10002965 Ga0265336_100029652 463
189 3300028800 Ga0265338_10000178 Ga0265338_1000017847 463
190 3300028800 Ga0265338_10018872 Ga0265338_100188722 463
191 3300028800 Ga0265338_10021203 Ga0265338_100212032 463
192 3300031249 Ga0265339_10047384 Ga0265339_100473843 463
193 3300031251 Ga0265327_10000017 Ga0265327_10000017120 463
194 3300037471 Ga0395905_0030131 Ga0395905_0030131_3289_4728 463
195 3300053137 Ga0500561_0000001 Ga0500561_0000001_605549_606967 463
196 3300001990 JGI24737J22298_10000095 JGI24737J22298_1000009526 464
197 3300002067 JGI24735J21928_10000227 JGI24735J21928_1000022714 464
198 3300005329 Ga0070683_100000140 Ga0070683_1000001403 464
199 3300005329 Ga0070683_100000657 Ga0070683_10000065715 464
200 3300005356 Ga0070674_100017853 Ga0070674_1000178533 464
201 3300005364 Ga0070673_100000478 Ga0070673_1000004789 464
202 3300005456 Ga0070678_100000939 Ga0070678_1000009397 464
203 3300005458 Ga0070681_10019344 Ga0070681_100193446 464
204 3300005466 Ga0070685_10004084 Ga0070685_100040846 464
205 3300005530 Ga0070679_100000652 Ga0070679_10000065219 464
206 3300005535 Ga0070684_100001211 Ga0070684_1000012119 464
207 3300005548 Ga0070665_100065599 Ga0070665_1000655993 464
208 3300005563 Ga0068855_100096826 Ga0068855_1000968261 464
209 3300005614 Ga0068856_100000866 Ga0068856_10000086612 464
210 3300005614 Ga0068856_100204796 Ga0068856_1002047962 464
211 3300006038 Ga0075365_10002466 Ga0075365_1000246610 464
212 3300006195 Ga0075366_10000044 Ga0075366_1000004424 464
213 3300006195 Ga0075366_10000729 Ga0075366_100007295 464
214 3300006195 Ga0075366_10117720 Ga0075366_101177201 464
215 3300006237 Ga0097621_100000370 Ga0097621_10000037027 464
216 3300006358 Ga0068871_100000156 Ga0068871_10000015617 464
217 3300006844 Ga0075428_100004931 Ga0075428_1000049317 464
218 3300009093 Ga0105240_10000003 Ga0105240_10000003782 464
219 3300009093 Ga0105240_10003943 Ga0105240_100039435 464
220 3300009098 Ga0105245_10000002 Ga0105245_10000002193 464
221 3300009098 Ga0105245_10000122 Ga0105245_1000012281 464
222 3300009098 Ga0105245_10001369 Ga0105245_1000136920 464
223 3300009148 Ga0105243_10000001 Ga0105243_10000001510 464
224 3300009174 Ga0105241_10002716 Ga0105241_100027168 464
225 3300009176 Ga0105242_10000064 Ga0105242_1000006474 464
226 3300009176 Ga0105242_10017900 Ga0105242_100179003 464
227 3300009987 Ga0105030_100807 Ga0105030_1008073 464
228 3300013100 Ga0157373_10000042 Ga0157373_1000004228 464
229 3300013296 Ga0157374_10000031 Ga0157374_10000031179 464
230 3300013296 Ga0157374_10000934 Ga0157374_1000093422 464
231 3300013296 Ga0157374_10119724 Ga0157374_101197242 464
232 3300013297 Ga0157378_10003107 Ga0157378_1000310710 464
233 3300014325 Ga0163163_10002375 Ga0163163_100023754 464
234 3300014745 Ga0157377_10003759 Ga0157377_100037592 464
235 3300014969 Ga0157376_10000001 Ga0157376_10000001163 464
236 3300025909 Ga0207705_10000056 Ga0207705_10000056110 464
237 3300025911 Ga0207654_10004434 Ga0207654_100044345 464
238 3300025913 Ga0207695_10000005 Ga0207695_10000005791 464
239 3300025913 Ga0207695_10040538 Ga0207695_100405385 464
240 3300025921 Ga0207652_10004446 Ga0207652_100044469 464
241 3300025927 Ga0207687_10000001 Ga0207687_100000011018 464
242 3300025927 Ga0207687_10000111 Ga0207687_1000011110 464
243 3300025927 Ga0207687_10003213 Ga0207687_100032132 464
244 3300025934 Ga0207686_10000001 Ga0207686_10000001632 464
245 3300025934 Ga0207686_10019560 Ga0207686_100195602 464
246 3300025935 Ga0207709_10000002 Ga0207709_10000002750 464
247 3300025937 Ga0207669_10003681 Ga0207669_100036815 464
248 3300025944 Ga0207661_10000021 Ga0207661_1000002188 464
249 3300025944 Ga0207661_10001361 Ga0207661_1000136115 464
250 3300025949 Ga0207667_10080354 Ga0207667_100803541 464
251 3300025960 Ga0207651_10000191 Ga0207651_1000019119 464
252 3300026041 Ga0207639_10039798 Ga0207639_100397982 464
253 3300026078 Ga0207702_10001222 Ga0207702_1000122221 464
254 3300026078 Ga0207702_10098752 Ga0207702_100987523 464
255 3300026121 Ga0207683_10002890 Ga0207683_1000289012 464
256 3300028379 Ga0268266_10027858 Ga0268266_100278585 464
257 3300028556 Ga0265337_1010723 Ga0265337_10107234 464
258 3300028556 Ga0265337_1019560 Ga0265337_10195602 464
259 3300028558 Ga0265326_10000303 Ga0265326_1000030318 464
260 3300028573 Ga0265334_10000049 Ga0265334_1000004970 464
261 3300028666 Ga0265336_10000047 Ga0265336_1000004749 464
262 3300028800 Ga0265338_10000003 Ga0265338_10000003448 464
263 3300028800 Ga0265338_10000039 Ga0265338_10000039241 464
264 3300028800 Ga0265338_10010726 Ga0265338_100107269 464
265 3300028800 Ga0265338_10046753 Ga0265338_100467534 464
266 3300028800 Ga0265338_10188092 Ga0265338_101880921 464
267 3300029957 Ga0265324_10002299 Ga0265324_100022995 464
268 3300031595 Ga0265313_10019928 Ga0265313_100199283 464
269 3300050489 nmdc:mga03683_1164_c1 nmdc:mga03683_1164_c1_40_1464 464
270 3300050491 nmdc:mga00v17_53585_c1 nmdc:mga00v17_53585_c1_122_1546 464
271 3300050492 nmdc:mga0yw44_559_c1 nmdc:mga0yw44_559_c1_10635_12059 464
272 3300050493 nmdc:mga0k408_17_c2 nmdc:mga0k408_17_c2_27572_28999 464
273 3300050493 nmdc:mga0k408_65301_c1 nmdc:mga0k408_65301_c1_149_1570 464
274 3300050511 nmdc:mga08y16_10036_c1 nmdc:mga08y16_10036_c1_2805_4253 464
275 3300053087 Ga0500643_000010 Ga0500643_000010_401079_402503 464
276 3300053087 Ga0500643_000022 Ga0500643_000022_5418_6842 464
277 3300053090 Ga0500646_0000316 Ga0500646_0000316_8685_10112 464
278 3300053098 Ga0500650_0000001 Ga0500650_0000001_420703_422130 464
279 3300053104 Ga0500556_0000295 Ga0500556_0000295_35164_36594 464
280 3300053108 Ga0500562_014045 Ga0500562_014045_482_1909 464
281 3300053117 Ga0500593_000001 Ga0500593_000001_619821_621245 464
282 3300053118 Ga0500594_0000001 Ga0500594_0000001_1081780_1083207 464
283 3300053130 Ga0500642_0011549 Ga0500642_0011549_1412_2836 464
284 3300053133 Ga0500655_001727 Ga0500655_001727_423_1850 464
285 3300053143 Ga0500579_008009 Ga0500579_008009_1726_3153 464
286 3300053147 Ga0500589_000016 Ga0500589_000016_38458_39882 464
287 3300053150 Ga0500603_004646 Ga0500603_004646_306_1724 464
288 3300053727 Ga0500611_000237 Ga0500611_000237_3760_5184 464

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

23

484

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.9153 6 464
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.9088 4 464
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.9038 6 464
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.9012 4 464
3kfu-assembly1.cif.gz_H crystal structure of the transamidosome 0.8907 6 464
ID Description Score Start End Superfamily
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9162 6 464 3.90.1300.10
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9088 4 464 3.90.1300.10
2gi3A01 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9074 20 459 3.90.1300.10
af_Q5FWT5_3_499_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9072 3 462 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9047 6 464 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A356K8P3-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A 0.9833 354 446 GO:0016740
AF-A0A359LVT4-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A 0.9816 359 462 GO:0016740
AF-A0A4S0PST5-F1-model_v4 deleted 0.9788 365 461
AF-A0A2T1CIC8-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA 0.9677 3 221 GO:0016740
AF-A0A7K0YX71-F1-model_v4 deleted 0.9627 6 143

Feature Viewer

pLDDT pTM Quality
88.27 0.88 High
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Predicted Structure (AlphaFold2)

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