F388378

General Info

Members Datasets Scaffolds Average Seq Length
288 149 564 630

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10001229|Ga0065707_100012292
Length 701
Sequence MSIVTNSQSQRAGRLPNSDECTPGGTRLVAAELKRFIIGRALRTEQAAHERLSKKTALAVFSSDALSSTAYATEEILLVLAVAAVYGQAGAFRYVIPVSIGIGMLLVIVAISYRQTIHAYPSGGGAYIVAKENLGTNAGLVAGAALLVDYVLTVAVSIAAGVAAITSMMQGTRYAWLDHHKVFLCLIFIGFIALANLRGVRESGALFAAPTYAFLISFLFMIGYGLFSYYTYGGAVPIPGPGEIKTAEGYKLQPLTLFLLLGAFSNGCAALTGIEAISNGVPAFKKPEAKNAATTLVVMAALLTTMFLGTSVLAYLYGVHPHASETVISQFARIMFTGPMAWFYYVVQITTALILVLAANTSFADFPRLGSLLARDRFLPRQFATRGDKLVFSNGIVMLAIFASVLVIAFGGDTSRLIPLYAVGVFLSFTLSQSGMIRHWLKERASSKKIKAQKRRKDDIHYTQSTVDAEPLPDAELEAYDQRQSTFVTDEVTDSLHWKKSIVINAVGAIATFIVLCVFIATKFIHGAWIVVVVVPLLVLMFRAIHKHYVGVAKQLSTEGLGDLRPIKHTVIVPISGIHRGVVSALQYAKSIAPDHVQAVYVDFDEEATAKLREKWERWGAGVKLVVLPSPYRELTRPLLRYITRLERKNSNDVITVLLPEFVPAKWWQHLLHNQSSLMLKGALLFKEGVIVISVPYHLKQ

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
132 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
133 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
134 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
135 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
136 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
137 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
138 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
139 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
140 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0
Isolates 0.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 0
Rhizoplane 0.35
Rhizosphere 97.92
Stem 0
Stem Tuber 0
Unclassified 12.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10001229 3300005295 Bacteria 7349
2 JGI24751J29686_10000027 3300002459 Bacteria 95343
3 JGI25406J46586_10000653 3300003203 Bacteria 16189
4 rootL2_10039783 3300003322 Bacteria 5569
5 Ga0065714_10064429 3300005288 Bacteria 141954
6 Ga0065704_10072271 3300005289 Bacteria 8820
7 Ga0065712_10001039 3300005290 Bacteria 8396
8 Ga0065712_10067729 3300005290 Bacteria 142513
9 Ga0065715_10089911 3300005293 Bacteria 8153
10 Ga0065707_10090380 3300005295 Unclassified 4150
11 Ga0065707_10095024 3300005295 Unclassified 3420
12 Ga0065707_10101519 3300005295 Bacteria 2837
13 Ga0070690_100011441 3300005330 Bacteria 5190
14 Ga0070670_100000070 3300005331 Bacteria 103166
15 Ga0070670_100033164 3300005331 Bacteria 4448
16 Ga0070670_100048544 3300005331 Bacteria 3652
17 Ga0068869_100003510 3300005334 Bacteria 9614
18 Ga0070680_100010648 3300005336 Bacteria 7094
19 Ga0070680_100016323 3300005336 Bacteria 5843
20 Ga0070680_100030501 3300005336 Bacteria 4331
21 Ga0070680_100140843 3300005336 Unclassified 2022
22 Ga0070682_100000059 3300005337 Bacteria 106643
23 Ga0070660_100003508 3300005339 Bacteria 10807
24 Ga0070691_10003418 3300005341 Bacteria 7135
25 Ga0070661_100015968 3300005344 Bacteria 5300
26 Ga0070661_100040039 3300005344 Bacteria 3417
27 Ga0070692_10004756 3300005345 Bacteria 5703
28 Ga0070692_10006500 3300005345 Bacteria 5081
29 Ga0070669_100054225 3300005353 Bacteria 2936
30 Ga0070675_100044355 3300005354 Bacteria 3636
31 Ga0070688_100064143 3300005365 Unclassified 2330
32 Ga0070659_100043560 3300005366 Bacteria 3510
33 Ga0070659_100049665 3300005366 Bacteria 3299
34 Ga0070667_100020567 3300005367 Bacteria 5478
35 Ga0070701_10005332 3300005438 Bacteria 5297
36 Ga0070705_100006874 3300005440 Bacteria 5590
37 Ga0070705_100052287 3300005440 Bacteria 2386
38 Ga0070700_100000022 3300005441 Bacteria 130126
39 Ga0070700_100043438 3300005441 Bacteria 2765
40 Ga0070694_100051052 3300005444 Bacteria 2790
41 Ga0070708_100000002 3300005445 Bacteria 195857
42 Ga0070708_100018878 3300005445 Bacteria 5777
43 Ga0070708_100030776 3300005445 Bacteria 4641
44 Ga0070681_10003307 3300005458 Bacteria 15058
45 Ga0070681_10007710 3300005458 Bacteria 10520
46 Ga0068867_100030213 3300005459 Bacteria 3908
47 Ga0068867_100101977 3300005459 Bacteria 2193
48 Ga0070706_100000309 3300005467 Bacteria 59357
49 Ga0070706_100002938 3300005467 Bacteria 16943
50 Ga0070698_100005178 3300005471 Bacteria 14260
51 Ga0070698_100005209 3300005471 Bacteria 14216
52 Ga0070698_100030435 3300005471 Bacteria 5595
53 Ga0070698_100041533 3300005471 Bacteria 4721
54 Ga0070698_100041914 3300005471 Bacteria 4698
55 Ga0070699_100000737 3300005518 Bacteria 30330
56 Ga0070699_100002528 3300005518 Bacteria 16425
57 Ga0070699_100020417 3300005518 Bacteria 5713
58 Ga0070699_100029687 3300005518 Unclassified 4715
59 Ga0070699_100080617 3300005518 Unclassified 2837
60 Ga0070699_100150911 3300005518 Bacteria 2055
61 Ga0070679_100014464 3300005530 Bacteria 7578
62 Ga0070697_100000371 3300005536 Bacteria 35019
63 Ga0070697_100000693 3300005536 Bacteria 25195
64 Ga0070697_100005224 3300005536 Bacteria 9976
65 Ga0070697_100015317 3300005536 Bacteria 6017
66 Ga0070686_100000383 3300005544 Bacteria 28300
67 Ga0070695_100004010 3300005545 Bacteria 8607
68 Ga0070695_100018673 3300005545 Bacteria 4212
69 Ga0070695_100085661 3300005545 Bacteria 2092
70 Ga0070696_100022016 3300005546 Bacteria 4327
71 Ga0070696_100024612 3300005546 Unclassified 4092
72 Ga0070696_100034615 3300005546 Bacteria 3475
73 Ga0070704_100029402 3300005549 Bacteria 3668
74 Ga0070664_100001062 3300005564 Bacteria 21613
75 Ga0070664_100028521 3300005564 Bacteria 4644
76 Ga0068857_100004192 3300005577 Bacteria 12136
77 Ga0068857_100060971 3300005577 Bacteria 3351
78 Ga0070702_100016913 3300005615 Unclassified 3753
79 Ga0068852_100038104 3300005616 Bacteria 4037
80 Ga0068859_100000683 3300005617 Bacteria 34065
81 Ga0068859_100037639 3300005617 Bacteria 4855
82 Ga0068859_100085211 3300005617 Bacteria 3205
83 Ga0068864_100028145 3300005618 Unclassified 4749
84 Ga0068864_100039086 3300005618 Bacteria 4054
85 Ga0068864_100041935 3300005618 Plasmid 3915
86 Ga0068861_100004439 3300005719 Bacteria 9413
87 Ga0068870_10020452 3300005840 Bacteria 3224
88 Ga0068863_100070637 3300005841 Bacteria 3302
89 Ga0068860_100025339 3300005843 Bacteria 5723
90 Ga0068860_100032361 3300005843 Bacteria 5024
91 Ga0068860_100037094 3300005843 Bacteria 4666
92 Ga0068860_100070517 3300005843 Unclassified 3322
93 Ga0068860_100095328 3300005843 Bacteria 2836
94 Ga0068860_100116208 3300005843 Unclassified 2559
95 Ga0068862_100024426 3300005844 Bacteria 5071
96 Ga0081455_10001143 3300005937 Bacteria 33212
97 Ga0081539_10000053 3300005985 Bacteria 264549
98 Ga0081539_10000318 3300005985 Bacteria 107294
99 Ga0081539_10000380 3300005985 Bacteria 96999
100 Ga0081539_10000884 3300005985 Bacteria 57334
101 Ga0081539_10004052 3300005985 Bacteria 16778
102 Ga0081539_10018934 3300005985 Bacteria 4743
103 Ga0070716_100021881 3300006173 Bacteria 3373
104 Ga0070712_100001437 3300006175 Bacteria 14526
105 Ga0097621_100016554 3300006237 Bacteria 5577
106 Ga0075428_100065771 3300006844 Bacteria 3970
107 Ga0075430_100013613 3300006846 Bacteria 6933
108 Ga0075430_100045047 3300006846 Bacteria 3728
109 Ga0075430_100124884 3300006846 Bacteria 2145
110 Ga0075429_100023728 3300006880 Bacteria 5323
111 Ga0068865_100051091 3300006881 Bacteria 2859
112 Ga0097620_100000683 3300006931 Bacteria 34065
113 Ga0097620_100037636 3300006931 Bacteria 4855
114 Ga0097620_100085212 3300006931 Bacteria 3205
115 Ga0111539_10002340 3300009094 Bacteria 25237
116 Ga0111539_10061181 3300009094 Unclassified 4461
117 Ga0111539_10134600 3300009094 Bacteria 2894
118 Ga0105245_10034849 3300009098 Bacteria 4465
119 Ga0105247_10002711 3300009101 Bacteria 11876
120 Ga0105247_10017257 3300009101 Unclassified 4333
121 Ga0105247_10020445 3300009101 Unclassified 3980
122 Ga0114129_10000837 3300009147 Bacteria 39825
123 Ga0114129_10021507 3300009147 Bacteria 9156
124 Ga0114129_10034299 3300009147 Bacteria 7167
125 Ga0114129_10035444 3300009147 Bacteria 7048
126 Ga0114129_10050016 3300009147 Bacteria 5872
127 Ga0114129_10053415 3300009147 Bacteria 5666
128 Ga0114129_10106482 3300009147 Bacteria 3873
129 Ga0105243_10003443 3300009148 Bacteria 12803
130 Ga0105243_10006598 3300009148 Bacteria 8963
131 Ga0105243_10019220 3300009148 Bacteria 5180
132 Ga0105241_10013255 3300009174 Bacteria 6042
133 Ga0105241_10019554 3300009174 Bacteria 4995
134 Ga0105241_10044183 3300009174 Bacteria 3376
135 Ga0105242_10015374 3300009176 Bacteria 5943
136 Ga0105242_10083145 3300009176 Unclassified 2680
137 Ga0105248_10000654 3300009177 Bacteria 39374
138 Ga0105248_10007433 3300009177 Bacteria 12020
139 Ga0105248_10114273 3300009177 Bacteria 3045
140 Ga0105248_10134038 3300009177 Bacteria 2795
141 Ga0105237_10000015 3300009545 Bacteria 266079
142 Ga0105237_10000987 3300009545 Bacteria 38208
143 Ga0105238_10005001 3300009551 Bacteria 13103
144 Ga0105249_10035054 3300009553 Bacteria 4549
145 Ga0105249_10052111 3300009553 Bacteria 3736
146 Ga0105239_10011023 3300010375 Bacteria 10091
147 Ga0157373_10057267 3300013100 Bacteria 2765
148 Ga0157374_10060822 3300013296 Unclassified 3536
149 Ga0157378_10002816 3300013297 Bacteria 15511
150 Ga0157378_10011097 3300013297 Bacteria 7887
151 Ga0163162_10020230 3300013306 Bacteria 6535
152 Ga0163162_10021143 3300013306 Bacteria 6401
153 Ga0163162_10032634 3300013306 Bacteria 5172
154 Ga0163162_10060124 3300013306 Bacteria 3834
155 Ga0163162_10067962 3300013306 Bacteria 3614
156 Ga0157372_10015528 3300013307 Bacteria 8162
157 Ga0157372_10153305 3300013307 Bacteria 2660
158 Ga0157375_10007230 3300013308 Bacteria 9709
159 Ga0157375_10144414 3300013308 Bacteria 2509
160 Ga0163163_10000087 3300014325 Bacteria 101689
161 Ga0163163_10035603 3300014325 Unclassified 4830
162 Ga0163163_10048985 3300014325 Bacteria 4157
163 Ga0163163_10075924 3300014325 Unclassified 3354
164 Ga0157380_10000706 3300014326 Bacteria 20837
165 Ga0157380_10018693 3300014326 Bacteria 5149
166 Ga0157380_10019657 3300014326 Bacteria 5036
167 Ga0157379_10006162 3300014968 Bacteria 10326
168 Ga0163161_10003387 3300017792 Bacteria 11187
169 Ga0207710_10000492 3300025900 Bacteria 24831
170 Ga0207680_10011127 3300025903 Bacteria 4533
171 Ga0207643_10009255 3300025908 Bacteria 5291
172 Ga0207643_10016262 3300025908 Bacteria 4058
173 Ga0207684_10000294 3300025910 Bacteria 71779
174 Ga0207684_10000319 3300025910 Bacteria 68429
175 Ga0207684_10003205 3300025910 Bacteria 16064
176 Ga0207684_10004522 3300025910 Bacteria 13065
177 Ga0207654_10043063 3300025911 Bacteria 2557
178 Ga0207707_10007513 3300025912 Bacteria 9496
179 Ga0207707_10007667 3300025912 Bacteria 9401
180 Ga0207671_10000007 3300025914 Bacteria 825758
181 Ga0207671_10000522 3300025914 Bacteria 51848
182 Ga0207693_10017563 3300025915 Bacteria 5704
183 Ga0207662_10028248 3300025918 Bacteria 3241
184 Ga0207657_10028442 3300025919 Bacteria 5099
185 Ga0207657_10040773 3300025919 Bacteria 4111
186 Ga0207646_10000004 3300025922 Bacteria 529176
187 Ga0207646_10006579 3300025922 Bacteria 11991
188 Ga0207646_10032336 3300025922 Bacteria 4735
189 Ga0207681_10036114 3300025923 Bacteria 3259
190 Ga0207694_10005367 3300025924 Bacteria 9868
191 Ga0207650_10000017 3300025925 Bacteria 354674
192 Ga0207650_10020855 3300025925 Bacteria 4628
193 Ga0207650_10050627 3300025925 Bacteria 3073
194 Ga0207650_10088849 3300025925 Bacteria 2357
195 Ga0207709_10016663 3300025935 Bacteria 4090
196 Ga0207691_10003797 3300025940 Bacteria 14662
197 Ga0207711_10002451 3300025941 Bacteria 16557
198 Ga0207711_10002546 3300025941 Bacteria 16233
199 Ga0207689_10071567 3300025942 Bacteria 2848
200 Ga0207679_10046280 3300025945 Bacteria 3153
201 Ga0207679_10055281 3300025945 Bacteria 2925
202 Ga0207712_10015966 3300025961 Bacteria 4854
203 Ga0207712_10017926 3300025961 Bacteria 4607
204 Ga0207712_10031751 3300025961 Unclassified 3560
205 Ga0207712_10061952 3300025961 Bacteria 2657
206 Ga0207677_10064908 3300026023 Unclassified 2545
207 Ga0207639_10058479 3300026041 Bacteria 2965
208 Ga0207708_10000040 3300026075 Bacteria 130242
209 Ga0207708_10009770 3300026075 Bacteria 7119
210 Ga0207708_10013761 3300026075 Bacteria 6046
211 Ga0207708_10028580 3300026075 Bacteria 4223
212 Ga0207708_10036304 3300026075 Bacteria 3752
213 Ga0207708_10057342 3300026075 Bacteria 2971
214 Ga0207641_10009274 3300026088 Bacteria 8115
215 Ga0207641_10026388 3300026088 Unclassified 4793
216 Ga0207648_10056918 3300026089 Unclassified 3412
217 Ga0207676_10001772 3300026095 Bacteria 15825
218 Ga0207676_10024238 3300026095 Unclassified 4487
219 Ga0207676_10065540 3300026095 Bacteria 2892
220 Ga0207674_10002271 3300026116 Bacteria 24359
221 Ga0207674_10015697 3300026116 Bacteria 8310
222 Ga0207674_10145365 3300026116 Bacteria 2329
223 Ga0207675_100008860 3300026118 Bacteria 9440
224 Ga0207683_10077324 3300026121 Unclassified 2947
225 Ga0207428_10009373 3300027907 Bacteria 8782
226 Ga0268265_10018094 3300028380 Bacteria 4879
227 Ga0268265_10052372 3300028380 Bacteria 3087
228 Ga0268264_10062305 3300028381 Unclassified 3131
229 Ga0307408_100010722 3300031548 Bacteria 6046
230 Ga0307408_100034035 3300031548 Bacteria 3565
231 Ga0307405_10003523 3300031731 Bacteria 7211
232 Ga0307405_10057017 3300031731 Unclassified 2452
233 Ga0307406_10003059 3300031901 Bacteria 9106
234 Ga0307406_10021871 3300031901 Unclassified 3789
235 Ga0307407_10011362 3300031903 Unclassified 4236
236 Ga0307416_100007886 3300032002 Bacteria 6813
237 Ga0307416_100059344 3300032002 Bacteria 3108
238 Ga0307414_10001925 3300032004 Bacteria 10749
239 Ga0307415_100002446 3300032126 Bacteria 9267
240 Ga0307415_100014753 3300032126 Bacteria 4605
241 Ga0307415_100028702 3300032126 Bacteria 3544
242 Ga0395905_0060132 3300037471 Unclassified 3553
243 Ga0395901_0245653 3300038443 Bacteria 1866
244 Ga0439458_0000730 3300042157 Bacteria 8466
245 Ga0451577_0000006 3300042876 Bacteria 709265
246 Ga0451577_0014507 3300042876 Bacteria 7345
247 Ga0453683_0000019 3300044673 Bacteria 287249
248 Ga0453683_0000097 3300044673 Bacteria 132392
249 Ga0453683_0031633 3300044673 Bacteria 3342
250 Ga0453684_0000037 3300044712 Bacteria 709327
251 Ga0453684_0011515 3300044712 Bacteria 14810
252 Ga0495629_0086282 3300046459 Unclassified 2190
253 Ga0495656_0000005 3300046615 Bacteria 238208
254 Ga0495659_0001592 3300046664 Bacteria 7637
255 Ga0496109_0000397 3300048912 Bacteria 39356
256 Ga0501297_000633 3300049520 Bacteria 3171
257 Ga0501207_000296 3300049654 Bacteria 5264
258 Ga0501209_002892 3300049656 Unclassified 2738
259 Ga0501217_000157 3300049661 Bacteria 9546
260 Ga0501217_006484 3300049661 Unclassified 2488
261 Ga0501227_000218 3300049665 Bacteria 11548
262 Ga0501233_006606 3300049668 Bacteria 2184
263 Ga0501235_002591 3300049669 Unclassified 3888
264 Ga0501235_003732 3300049669 Bacteria 3290
265 Ga0501249_007825 3300049679 Unclassified 2216
266 Ga0501221_000662 3300049704 Bacteria 5519
267 Ga0501221_004177 3300049704 Bacteria 2391
268 Ga0501225_0001301 3300049705 Bacteria 7741
269 Ga0501225_0003572 3300049705 Unclassified 4691
270 Ga0501081_0047807 3300049743 Bacteria 2944
271 Ga0501283_002316 3300049779 Bacteria 2474
272 nmdc:mga05p37_8542_c1 3300050507 Bacteria 12106
273 nmdc:mga0qj67_60085_c1 3300050509 Bacteria 3015
274 nmdc:mga0qj67_60637_c1 3300050509 Bacteria 3003
275 nmdc:mga08y16_117693_c1 3300050511 Bacteria 2766
276 nmdc:mga08y16_6562_c1 3300050511 Bacteria 12198
277 nmdc:mga0n895_23237_c1 3300050512 Bacteria 5824
278 nmdc:mga0a205_13806_c1 3300050515 Bacteria 7528
279 Ga0500616_0000554 3300053153 Bacteria 46158
280 Ga0500616_0007902 3300053153 Bacteria 6684
281 8007379957 8007375930 Bacteria 4080554
282 8007379964 8007375930 Bacteria 4080554
283 Ga0065707_10001229
284 JGI24751J29686_10000027
285 JGI25406J46586_10000653
286 rootL2_10039783
287 Ga0065714_10064429
288 Ga0065704_10072271
289 Ga0065712_10001039
290 Ga0065712_10067729
291 Ga0065715_10089911
292 Ga0065707_10090380
293 Ga0065707_10095024
294 Ga0065707_10101519
295 Ga0070690_100011441
296 Ga0070670_100000070
297 Ga0070670_100033164
298 Ga0070670_100048544
299 Ga0068869_100003510
300 Ga0070680_100010648
301 Ga0070680_100016323
302 Ga0070680_100030501
303 Ga0070680_100140843
304 Ga0070682_100000059
305 Ga0070660_100003508
306 Ga0070691_10003418
307 Ga0070661_100015968
308 Ga0070661_100040039
309 Ga0070692_10004756
310 Ga0070692_10006500
311 Ga0070669_100054225
312 Ga0070675_100044355
313 Ga0070688_100064143
314 Ga0070659_100043560
315 Ga0070659_100049665
316 Ga0070667_100020567
317 Ga0070701_10005332
318 Ga0070705_100006874
319 Ga0070705_100052287
320 Ga0070700_100000022
321 Ga0070700_100043438
322 Ga0070694_100051052
323 Ga0070708_100000002
324 Ga0070708_100018878
325 Ga0070708_100030776
326 Ga0070681_10003307
327 Ga0070681_10007710
328 Ga0068867_100030213
329 Ga0068867_100101977
330 Ga0070706_100000309
331 Ga0070706_100002938
332 Ga0070698_100005178
333 Ga0070698_100005209
334 Ga0070698_100030435
335 Ga0070698_100041533
336 Ga0070698_100041914
337 Ga0070699_100000737
338 Ga0070699_100002528
339 Ga0070699_100020417
340 Ga0070699_100029687
341 Ga0070699_100080617
342 Ga0070699_100150911
343 Ga0070679_100014464
344 Ga0070697_100000371
345 Ga0070697_100000693
346 Ga0070697_100005224
347 Ga0070697_100015317
348 Ga0070686_100000383
349 Ga0070695_100004010
350 Ga0070695_100018673
351 Ga0070695_100085661
352 Ga0070696_100022016
353 Ga0070696_100024612
354 Ga0070696_100034615
355 Ga0070704_100029402
356 Ga0070664_100001062
357 Ga0070664_100028521
358 Ga0068857_100004192
359 Ga0068857_100060971
360 Ga0070702_100016913
361 Ga0068852_100038104
362 Ga0068859_100000683
363 Ga0068859_100037639
364 Ga0068859_100085211
365 Ga0068864_100028145
366 Ga0068864_100039086
367 Ga0068864_100041935
368 Ga0068861_100004439
369 Ga0068870_10020452
370 Ga0068863_100070637
371 Ga0068860_100025339
372 Ga0068860_100032361
373 Ga0068860_100037094
374 Ga0068860_100070517
375 Ga0068860_100095328
376 Ga0068860_100116208
377 Ga0068862_100024426
378 Ga0081455_10001143
379 Ga0081539_10000053
380 Ga0081539_10000318
381 Ga0081539_10000380
382 Ga0081539_10000884
383 Ga0081539_10004052
384 Ga0081539_10018934
385 Ga0070716_100021881
386 Ga0070712_100001437
387 Ga0097621_100016554
388 Ga0075428_100065771
389 Ga0075430_100013613
390 Ga0075430_100045047
391 Ga0075430_100124884
392 Ga0075429_100023728
393 Ga0068865_100051091
394 Ga0097620_100000683
395 Ga0097620_100037636
396 Ga0097620_100085212
397 Ga0111539_10002340
398 Ga0111539_10061181
399 Ga0111539_10134600
400 Ga0105245_10034849
401 Ga0105247_10002711
402 Ga0105247_10017257
403 Ga0105247_10020445
404 Ga0114129_10000837
405 Ga0114129_10021507
406 Ga0114129_10034299
407 Ga0114129_10035444
408 Ga0114129_10050016
409 Ga0114129_10053415
410 Ga0114129_10106482
411 Ga0105243_10003443
412 Ga0105243_10006598
413 Ga0105243_10019220
414 Ga0105241_10013255
415 Ga0105241_10019554
416 Ga0105241_10044183
417 Ga0105242_10015374
418 Ga0105242_10083145
419 Ga0105248_10000654
420 Ga0105248_10007433
421 Ga0105248_10114273
422 Ga0105248_10134038
423 Ga0105237_10000015
424 Ga0105237_10000987
425 Ga0105238_10005001
426 Ga0105249_10035054
427 Ga0105249_10052111
428 Ga0105239_10011023
429 Ga0157373_10057267
430 Ga0157374_10060822
431 Ga0157378_10002816
432 Ga0157378_10011097
433 Ga0163162_10020230
434 Ga0163162_10021143
435 Ga0163162_10032634
436 Ga0163162_10060124
437 Ga0163162_10067962
438 Ga0157372_10015528
439 Ga0157372_10153305
440 Ga0157375_10007230
441 Ga0157375_10144414
442 Ga0163163_10000087
443 Ga0163163_10035603
444 Ga0163163_10048985
445 Ga0163163_10075924
446 Ga0157380_10000706
447 Ga0157380_10018693
448 Ga0157380_10019657
449 Ga0157379_10006162
450 Ga0163161_10003387
451 Ga0207710_10000492
452 Ga0207680_10011127
453 Ga0207643_10009255
454 Ga0207643_10016262
455 Ga0207684_10000294
456 Ga0207684_10000319
457 Ga0207684_10003205
458 Ga0207684_10004522
459 Ga0207654_10043063
460 Ga0207707_10007513
461 Ga0207707_10007667
462 Ga0207671_10000007
463 Ga0207671_10000522
464 Ga0207693_10017563
465 Ga0207662_10028248
466 Ga0207657_10028442
467 Ga0207657_10040773
468 Ga0207646_10000004
469 Ga0207646_10006579
470 Ga0207646_10032336
471 Ga0207681_10036114
472 Ga0207694_10005367
473 Ga0207650_10000017
474 Ga0207650_10020855
475 Ga0207650_10050627
476 Ga0207650_10088849
477 Ga0207709_10016663
478 Ga0207691_10003797
479 Ga0207711_10002451
480 Ga0207711_10002546
481 Ga0207689_10071567
482 Ga0207679_10046280
483 Ga0207679_10055281
484 Ga0207712_10015966
485 Ga0207712_10017926
486 Ga0207712_10031751
487 Ga0207712_10061952
488 Ga0207677_10064908
489 Ga0207639_10058479
490 Ga0207708_10000040
491 Ga0207708_10009770
492 Ga0207708_10013761
493 Ga0207708_10028580
494 Ga0207708_10036304
495 Ga0207708_10057342
496 Ga0207641_10009274
497 Ga0207641_10026388
498 Ga0207648_10056918
499 Ga0207676_10001772
500 Ga0207676_10024238
501 Ga0207676_10065540
502 Ga0207674_10002271
503 Ga0207674_10015697
504 Ga0207674_10145365
505 Ga0207675_100008860
506 Ga0207683_10077324
507 Ga0207428_10009373
508 Ga0268265_10018094
509 Ga0268265_10052372
510 Ga0268264_10062305
511 Ga0307408_100010722
512 Ga0307408_100034035
513 Ga0307405_10003523
514 Ga0307405_10057017
515 Ga0307406_10003059
516 Ga0307406_10021871
517 Ga0307407_10011362
518 Ga0307416_100007886
519 Ga0307416_100059344
520 Ga0307414_10001925
521 Ga0307415_100002446
522 Ga0307415_100014753
523 Ga0307415_100028702
524 Ga0395905_0060132
525 Ga0395901_0245653
526 Ga0439458_0000730
527 Ga0451577_0000006
528 Ga0451577_0014507
529 Ga0453683_0000019
530 Ga0453683_0000097
531 Ga0453683_0031633
532 Ga0453684_0000037
533 Ga0453684_0011515
534 Ga0495629_0086282
535 Ga0495656_0000005
536 Ga0495659_0001592
537 Ga0496109_0000397
538 Ga0501297_000633
539 Ga0501207_000296
540 Ga0501209_002892
541 Ga0501217_000157
542 Ga0501217_006484
543 Ga0501227_000218
544 Ga0501233_006606
545 Ga0501235_002591
546 Ga0501235_003732
547 Ga0501249_007825
548 Ga0501221_000662
549 Ga0501221_004177
550 Ga0501225_0001301
551 Ga0501225_0003572
552 Ga0501081_0047807
553 Ga0501283_002316
554 nmdc:mga05p37_8542_c1
555 nmdc:mga0qj67_60085_c1
556 nmdc:mga0qj67_60637_c1
557 nmdc:mga08y16_117693_c1
558 nmdc:mga08y16_6562_c1
559 nmdc:mga0n895_23237_c1
560 nmdc:mga0a205_13806_c1
561 Ga0500616_0000554
562 Ga0500616_0007902
563 8007379957
564 8007379964

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

52

542

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b71-assembly1.cif.gz_B upright kima dimer with bound c-di-amp from b. subtilis 0.8289 31 646
8b71-assembly1.cif.gz_B upright kima dimer with bound c-di-amp from b. subtilis 0.8261 31 646
8b70-assembly1.cif.gz_A kima from b. subtilis with nucleotide second-messenger c-di-amp bound 0.7874 23 646
8b70-assembly1.cif.gz_A kima from b. subtilis with nucleotide second-messenger c-di-amp bound 0.7849 23 646
6s3k-assembly1.cif.gz_B kima from bacillus subtilis in inward-facing, occluded state 0.7768 29 646
ID Description Score Start End Superfamily
af_Q2FVH8_33_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.906 34 510 1.20.1740.10
af_Q2FVH8_33_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.902 34 510 1.20.1740.10
af_I6Y1H7_43_499_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.833 33 507 1.20.1740.10
af_I6Y1H7_43_499_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8296 33 507 1.20.1740.10
af_P9WQM9_17_470_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8089 22 501 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A2V8N4Z7-F1-model_v4 Amino acid permease 0.9353 545 647
AF-A0A1T3WK72-F1-model_v4 DNA-binding protein 0.9336 534 646 GO:0003677
AF-A0A535Q479-F1-model_v4 Amino acid permease 0.9262 508 647
AF-A0A2V8HWP8-F1-model_v4 Amino acid permease 0.923 481 645
AF-A0A3M1UB61-F1-model_v4 APC family permease 0.9018 1 646 GO:0016020
GO:0022857

Map