F388366

General Info

Members Datasets Scaffolds Average Seq Length
288 143 288 497

Family's Representative Sequence

Representative Sequence 3300003911|JGI25405J52794_10006262|JGI25405J52794_100062622
Length 560
Sequence VALRKIVGVETEFGIIVRGAGESNPIAASSVLINAYVHELARAGAGPRDNPKVGWDFEDEHPDIDARGFTAEGSLAPEVETHLVNAVLTNGARYYVDHAHPELSTPECADPRSVVVFDKAAEVILQRSMRAARELLADEQEIVVYKNNSDRKGNSYGCHENYLMDRQVPFSRIVTHVMPHFISRQVFTGAGKVGTEVAGLTSDDVPFQLTQRADFFEEEVGLETTLKRPIVNTRDEPHADAQRYRRLHVIVGDANLSEVATFLKVGTTALVLSMIEDEFLPRDLTLATPVAALRRVSHDLSLRQPLDLADGTTMTAVEIQWEYLDRAKKYAEEHGLECIGPPEIGADVLRLWEQVLTGLETDPASVATMTAVEIQWEYLDRAKKYAEEHGLECIGPPEIGADVLRLWEQVLTGLETDPASVFRQVDWAAKYRLIDGYRAKHDLRWDDARLAAMDLQYHDLRPERGLAPRVGLERLTTDDEVDRAVTEPPRDTRAYFRGMCLQRWAPQIVAANWDSMVFDIGGDPLRRVPMMDPTRGTEAHVGKLMAESSSVAELLDRLGQ

Samples

Sample ID Description Type Environment
1 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
44 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
45 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
46 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
50 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
61 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
62 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
63 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
64 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
67 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
73 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
76 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
77 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
108 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
109 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
112 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
122 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
123 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
126 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
134 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
135 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.07
Nodule 0
Rhizoplane 7.29
Rhizosphere 79.86
Stem 0
Stem Tuber 0
Unclassified 2.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10006262 3300003911 Bacteria 2172
2 JGI25405J52794_10007014 3300003911 Bacteria 2068
3 Ga0070671_100064217 3300005355 Bacteria 3058
4 Ga0070674_100119116 3300005356 Bacteria 1952
5 Ga0070714_100163446 3300005435 Bacteria 2016
6 Ga0070705_100021091 3300005440 Bacteria 3461
7 Ga0070708_100002013 3300005445 Bacteria 15647
8 Ga0070708_100023290 3300005445 Bacteria 5264
9 Ga0068867_100004800 3300005459 Bacteria 9516
10 Ga0070706_100027892 3300005467 Bacteria 5193
11 Ga0070706_100048956 3300005467 Bacteria 3900
12 Ga0070698_100015415 3300005471 Bacteria 8075
13 Ga0070699_100058475 3300005518 Bacteria 3339
14 Ga0070697_100005521 3300005536 Bacteria 9750
15 Ga0070695_100016320 3300005545 Bacteria 4493
16 Ga0070696_100085057 3300005546 Bacteria 2245
17 Ga0068862_100029898 3300005844 Bacteria 4590
18 Ga0068862_100103954 3300005844 Bacteria 2488
19 Ga0081455_10003054 3300005937 Bacteria 19499
20 Ga0081455_10017807 3300005937 Bacteria 6792
21 Ga0081538_10012628 3300005981 Bacteria 6759
22 Ga0081538_10015711 3300005981 Bacteria 5845
23 Ga0081538_10033329 3300005981 Bacteria 3431
24 Ga0075365_10001217 3300006038 Bacteria 11378
25 Ga0075365_10001559 3300006038 Bacteria 10497
26 Ga0075365_10002354 3300006038 Bacteria 9217
27 Ga0075368_10008884 3300006042 Bacteria 3600
28 Ga0075363_100007982 3300006048 Bacteria 4905
29 Ga0075364_10002418 3300006051 Bacteria 10460
30 Ga0075364_10016695 3300006051 Bacteria 4571
31 Ga0075364_10029563 3300006051 Bacteria 3515
32 Ga0075364_10041290 3300006051 Bacteria 2995
33 Ga0075428_100001516 3300006844 Bacteria 24855
34 Ga0075428_100010421 3300006844 Bacteria 10321
35 Ga0075428_100082882 3300006844 Bacteria 3499
36 Ga0075428_100179239 3300006844 Bacteria 2294
37 Ga0075430_100001068 3300006846 Bacteria 21721
38 Ga0075430_100026361 3300006846 Bacteria 4946
39 Ga0075430_100129345 3300006846 Bacteria 2105
40 Ga0075430_100167377 3300006846 Bacteria 1829
41 Ga0075431_100027285 3300006847 Bacteria 5858
42 Ga0075431_100050421 3300006847 Bacteria 4292
43 Ga0075431_100053116 3300006847 Bacteria 4178
44 Ga0075431_100212493 3300006847 Bacteria 1976
45 Ga0075431_100230860 3300006847 Bacteria 1885
46 Ga0075433_10014730 3300006852 Bacteria 6399
47 Ga0075429_100000303 3300006880 Bacteria 34915
48 Ga0075429_100014427 3300006880 Bacteria 6846
49 Ga0075429_100015870 3300006880 Bacteria 6521
50 Ga0075429_100053209 3300006880 Bacteria 3523
51 Ga0075435_100003522 3300007076 Bacteria 10624
52 Ga0111539_10053495 3300009094 Bacteria 4805
53 Ga0111539_10064306 3300009094 Bacteria 4340
54 Ga0105245_10002773 3300009098 Bacteria 15755
55 Ga0105245_10025030 3300009098 Bacteria 5247
56 Ga0105245_10079652 3300009098 Bacteria 2991
57 Ga0105245_10192980 3300009098 Bacteria 1952
58 Ga0114129_10000100 3300009147 Bacteria 84154
59 Ga0114129_10019673 3300009147 Bacteria 9610
60 Ga0114129_10053147 3300009147 Bacteria 5681
61 Ga0114129_10157172 3300009147 Bacteria 3108
62 Ga0105243_10080906 3300009148 Bacteria 2651
63 Ga0105249_10040981 3300009553 Bacteria 4208
64 Ga0157378_10013158 3300013297 Bacteria 7239
65 Ga0163162_10115654 3300013306 Bacteria 2783
66 Ga0207684_10019926 3300025910 Bacteria 5733
67 Ga0207684_10020501 3300025910 Bacteria 5649
68 Ga0207650_10114186 3300025925 Bacteria 2095
69 Ga0207641_10013010 3300026088 Bacteria 6824
70 Ga0207648_10007388 3300026089 Bacteria 10816
71 Ga0207428_10031703 3300027907 Bacteria 4357
72 Ga0207428_10051249 3300027907 Bacteria 3300
73 Ga0268264_10007596 3300028381 Bacteria 9038
74 Ga0265338_10002533 3300028800 Bacteria 27091
75 Ga0265325_10002228 3300031241 Bacteria 13154
76 Ga0265339_10010516 3300031249 Bacteria 5747
77 Ga0265313_10006790 3300031595 Bacteria 8001
78 Ga0316576_10000669 3300031727 Bacteria 16692
79 Ga0316576_10002864 3300031727 Bacteria 9950
80 Ga0316576_10014401 3300031727 Bacteria 5284
81 Ga0316576_10055707 3300031727 Bacteria 2886
82 Ga0316576_10066023 3300031727 Bacteria 2660
83 Ga0316576_10114336 3300031727 Bacteria 2024
84 Ga0316578_10001829 3300031728 Bacteria 8953
85 Ga0316578_10028151 3300031728 Bacteria 3180
86 Ga0316578_10043554 3300031728 Bacteria 2607
87 Ga0316577_10000655 3300031733 Bacteria 14458
88 Ga0316577_10006948 3300031733 Bacteria 6014
89 Ga0316577_10025926 3300031733 Bacteria 3261
90 Ga0307409_100001873 3300031995 Bacteria 10714
91 Ga0307409_100006765 3300031995 Bacteria 6780
92 Ga0307415_100025455 3300032126 Bacteria 3714
93 Ga0307415_100077856 3300032126 Bacteria 2356
94 Ga0316580_10004609 3300032139 Bacteria 4004
95 Ga0316580_10013974 3300032139 Bacteria 2448
96 Ga0373932_0001689 3300035112 Bacteria 6008
97 Ga0316574_0002995 3300035398 Bacteria 8611
98 Ga0316574_0005124 3300035398 Bacteria 6967
99 Ga0316574_0008065 3300035398 Bacteria 5825
100 Ga0316574_0012494 3300035398 Bacteria 4858
101 Ga0316574_0035798 3300035398 Bacteria 3036
102 Ga0316574_0037767 3300035398 Bacteria 2963
103 Ga0373931_0000005 3300035691 Bacteria 480485
104 Ga0373931_0000051 3300035691 Bacteria 62223
105 Ga0373935_0067996 3300035692 Bacteria 2292
106 Ga0373927_0082204 3300035695 Bacteria 2088
107 Ga0373937_0017613 3300036401 Bacteria 6370
108 Ga0316582_0004262 3300036647 Bacteria 7187
109 Ga0316582_0088608 3300036647 Bacteria 2033
110 Ga0316584_0001543 3300036712 Bacteria 13930
111 Ga0316584_0007611 3300036712 Bacteria 7429
112 Ga0316584_0070989 3300036712 Bacteria 2610
113 Ga0373925_0010333 3300037068 Bacteria 6773
114 Ga0395901_0241086 3300038443 Bacteria 1886
115 Ga0400485_01088 3300038735 Bacteria 5949
116 Ga0400483_023979 3300039062 Bacteria 16049
117 Ga0400483_109457 3300039062 Bacteria 4959
118 Ga0400483_117918 3300039062 Bacteria 19432
119 Ga0400483_167087 3300039062 Bacteria 6508
120 Ga0400483_196206 3300039062 Bacteria 5117
121 Ga0400483_270897 3300039062 Bacteria 7832
122 Ga0400483_279754 3300039062 Bacteria 139594
123 Ga0436362_0996438 3300039453 Bacteria 2138
124 Ga0436362_1235515 3300039453 Bacteria 2885
125 Ga0439450_000487 3300042008 Bacteria 5197
126 Ga0439452_003893 3300042010 Bacteria 5116
127 Ga0451577_0002133 3300042876 Bacteria 24246
128 Ga0466966_0020436 3300044684 Bacteria 4353
129 Ga0466961_0104435 3300044693 Bacteria 1784
130 Ga0453684_0006714 3300044712 Bacteria 21692
131 Ga0466967_0094435 3300045976 Bacteria 2724
132 Ga0495651_0013504 3300046462 Bacteria 6317
133 Ga0495639_0043819 3300046475 Bacteria 2022
134 Ga0495608_0132872 3300046511 Bacteria 1592
135 Ga0495628_0067440 3300046516 Bacteria 2794
136 Ga0495630_0008700 3300046517 Bacteria 7290
137 Ga0495630_0053272 3300046517 Bacteria 3029
138 Ga0495630_0057858 3300046517 Bacteria 2906
139 Ga0495634_0057783 3300046642 Bacteria 2588
140 Ga0495657_0001706 3300046675 Bacteria 18831
141 Ga0495647_0017747 3300046681 Bacteria 2523
142 Ga0495613_0019455 3300046689 Bacteria 5060
143 Ga0495604_0039150 3300047317 Bacteria 3727
144 Ga0495672_0004945 3300047320 Bacteria 10701
145 Ga0495680_0043335 3300047322 Bacteria 3564
146 Ga0496101_0005622 3300048904 Bacteria 7994
147 Ga0496101_0035671 3300048904 Bacteria 3519
148 Ga0496102_0008387 3300048905 Bacteria 8851
149 Ga0496102_0074662 3300048905 Bacteria 3117
150 Ga0496104_0039221 3300048907 Bacteria 4434
151 Ga0496104_0053696 3300048907 Bacteria 3808
152 Ga0496104_0061242 3300048907 Bacteria 3568
153 Ga0496106_0035971 3300048909 Bacteria 3704
154 Ga0496108_0029459 3300048911 Bacteria 4546
155 Ga0496108_0037135 3300048911 Bacteria 4056
156 Ga0496109_0090395 3300048912 Bacteria 2832
157 Ga0496110_0011977 3300048913 Bacteria 7123
158 Ga0496110_0034798 3300048913 Bacteria 4366
159 Ga0496111_0004058 3300048914 Bacteria 9198
160 Ga0496112_0003384 3300048915 Bacteria 13170
161 Ga0496112_0017463 3300048915 Bacteria 6741
162 Ga0496114_0036251 3300048917 Bacteria 4076
163 Ga0496114_0067441 3300048917 Bacteria 3002
164 Ga0496114_0077349 3300048917 Bacteria 2805
165 Ga0496114_0114004 3300048917 Bacteria 2318
166 Ga0496115_0043807 3300048918 Bacteria 3568
167 Ga0501031_0018639 3300049568 Bacteria 4520
168 Ga0501031_0082826 3300049568 Bacteria 2091
169 Ga0501032_0001945 3300049569 Bacteria 16253
170 Ga0501033_0033055 3300049570 Bacteria 3884
171 Ga0501034_0000312 3300049571 Bacteria 86122
172 Ga0501034_0001349 3300049571 Bacteria 33163
173 Ga0501034_0003176 3300049571 Bacteria 18899
174 Ga0501034_0025083 3300049571 Bacteria 6067
175 Ga0501034_0120368 3300049571 Bacteria 2611
176 Ga0501034_0156011 3300049571 Bacteria 2256
177 Ga0501034_0167595 3300049571 Bacteria 2165
178 Ga0501036_0004581 3300049572 Bacteria 11165
179 Ga0501036_0128479 3300049572 Bacteria 2140
180 Ga0501037_0006303 3300049573 Bacteria 8675
181 Ga0501037_0055593 3300049573 Bacteria 2894
182 Ga0501038_0013008 3300049574 Bacteria 7591
183 Ga0501038_0030222 3300049574 Bacteria 4796
184 Ga0501038_0078695 3300049574 Bacteria 2782
185 Ga0501039_0003383 3300049575 Bacteria 11926
186 Ga0501040_0004317 3300049576 Bacteria 9237
187 Ga0501040_0048652 3300049576 Bacteria 2897
188 Ga0501041_0037765 3300049577 Bacteria 2927
189 Ga0501042_0011551 3300049578 Bacteria 5961
190 Ga0501042_0076856 3300049578 Bacteria 2390
191 Ga0501043_0020194 3300049579 Bacteria 5230
192 Ga0501046_0013369 3300049580 Bacteria 6952
193 Ga0501048_0015362 3300049582 Bacteria 5654
194 Ga0501048_0051952 3300049582 Bacteria 2916
195 Ga0501068_0000667 3300049584 Bacteria 17638
196 Ga0501068_0025568 3300049584 Bacteria 3473
197 Ga0501069_0000168 3300049585 Bacteria 29253
198 Ga0501069_0029841 3300049585 Bacteria 2993
199 Ga0501070_0000030 3300049586 Bacteria 139270
200 Ga0501070_0001494 3300049586 Bacteria 20893
201 Ga0501070_0004183 3300049586 Bacteria 12424
202 Ga0501071_0014925 3300049587 Bacteria 5323
203 Ga0501072_0001216 3300049588 Bacteria 19224
204 Ga0501072_0001611 3300049588 Bacteria 16865
205 Ga0501073_0002645 3300049589 Bacteria 13421
206 Ga0501073_0012657 3300049589 Bacteria 6153
207 Ga0501073_0104511 3300049589 Bacteria 1966
208 Ga0501074_0002153 3300049590 Bacteria 13628
209 Ga0501074_0027276 3300049590 Bacteria 4141
210 Ga0501074_0097220 3300049590 Bacteria 2108
211 Ga0501075_0003039 3300049591 Bacteria 11207
212 Ga0501075_0094406 3300049591 Bacteria 2271
213 Ga0501076_0002311 3300049592 Bacteria 13054
214 Ga0501076_0004685 3300049592 Bacteria 9749
215 Ga0501076_0064033 3300049592 Bacteria 2930
216 Ga0501076_0104598 3300049592 Bacteria 2284
217 Ga0501079_0007203 3300049741 Bacteria 8398
218 Ga0501079_0013056 3300049741 Bacteria 6336
219 Ga0501079_0025657 3300049741 Bacteria 4518
220 Ga0501080_0001263 3300049742 Bacteria 21034
221 Ga0501080_0005255 3300049742 Bacteria 11533
222 Ga0501080_0014633 3300049742 Bacteria 7227
223 Ga0501080_0018599 3300049742 Bacteria 6430
224 Ga0501081_0008844 3300049743 Bacteria 6546
225 Ga0501083_0000155 3300049744 Bacteria 45460
226 Ga0501044_0000319 3300049823 Bacteria 60713
227 Ga0501044_0000676 3300049823 Bacteria 41239
228 Ga0501044_0140409 3300049823 Bacteria 2405
229 Ga0501045_0013114 3300049824 Bacteria 5846
230 Ga0501045_0037887 3300049824 Bacteria 3506
231 Ga0501045_0130801 3300049824 Bacteria 1866
232 nmdc:mga03683_20317_c1 3300050489 Bacteria 2547
233 nmdc:mga03n38_13100_c1 3300050490 Bacteria 3140
234 nmdc:mga03n38_25508_c1 3300050490 Bacteria 2429
235 nmdc:mga00v17_119247_c1 3300050491 Bacteria 1679
236 nmdc:mga00v17_12854_c1 3300050491 Bacteria 4631
237 nmdc:mga00v17_650_c1 3300050491 Bacteria 19207
238 nmdc:mga0yw44_1188_c1 3300050492 Bacteria 10171
239 nmdc:mga0yw44_13797_c1 3300050492 Bacteria 4268
240 nmdc:mga0yw44_4507_c1 3300050492 Bacteria 6404
241 nmdc:mga0yw44_9752_c1 3300050492 Bacteria 4877
242 nmdc:mga06z11_51155_c1 3300050494 Bacteria 2114
243 nmdc:mga05p37_168244_c1 3300050507 Bacteria 2674
244 nmdc:mga05p37_174112_c1 3300050507 Bacteria 2623
245 nmdc:mga05p37_39431_c1 3300050507 Bacteria 5799
246 nmdc:mga05p37_804_c2 3300050507 Bacteria 30686
247 nmdc:mga05p37_86064_c1 3300050507 Bacteria 3874
248 nmdc:mga09592_1658_c1 3300050508 Bacteria 17921
249 nmdc:mga09592_19778_c1 3300050508 Bacteria 5531
250 nmdc:mga09592_22018_c1 3300050508 Bacteria 5258
251 nmdc:mga09592_33511_c1 3300050508 Bacteria 4288
252 nmdc:mga09592_73020_c1 3300050508 Bacteria 2915
253 nmdc:mga0qj67_12340_c1 3300050509 Bacteria 6435
254 nmdc:mga0qj67_42571_c1 3300050509 Bacteria 3575
255 nmdc:mga0qj67_9407_c1 3300050509 Bacteria 7270
256 nmdc:mga06r32_21278_c1 3300050510 Bacteria 5986
257 nmdc:mga06r32_532_c1 3300050510 Bacteria 32919
258 nmdc:mga06r32_7283_c1 3300050510 Bacteria 9965
259 nmdc:mga08y16_25989_c1 3300050511 Bacteria 6177
260 nmdc:mga08y16_34959_c1 3300050511 Bacteria 5280
261 nmdc:mga0a205_6383_c1 3300050515 Bacteria 10652
262 Ga0495601_0006224 3300053077 Bacteria 6967
263 Ga0495601_0046976 3300053077 Bacteria 2718
264 Ga0500635_0004063 3300053080 Bacteria 3739
265 Ga0495595_0010451 3300053084 Bacteria 3857
266 Ga0495595_0034870 3300053084 Bacteria 2278
267 Ga0495619_0005863 3300053085 Bacteria 7783
268 Ga0495619_0032305 3300053085 Bacteria 3396
269 Ga0495619_0056930 3300053085 Bacteria 2593
270 Ga0500566_0000568 3300053094 Bacteria 20773
271 Ga0500566_0061556 3300053094 Bacteria 2124
272 Ga0500641_0003134 3300053096 Bacteria 5854
273 Ga0500568_0000132 3300053139 Bacteria 67870
274 Ga0500568_0015682 3300053139 Bacteria 3388
275 Ga0500616_0000813 3300053153 Bacteria 35573
276 Ga0500616_0004464 3300053153 Bacteria 9959
277 Ga0500616_0004781 3300053153 Bacteria 9493
278 Ga0501084_0000020 3300054114 Bacteria 146335
279 Ga0501084_0000314 3300054114 Bacteria 36782
280 Ga0501084_0006165 3300054114 Bacteria 9862
281 Ga0501084_0080306 3300054114 Bacteria 2735
282 Ga0501082_0053178 3300060353 Bacteria 3491
283 Ga0501082_0096567 3300060353 Bacteria 2555
284 Ga0501082_0185378 3300060353 Bacteria 1811
285 Ga0530510_0022734 3300061734 Bacteria 4467
286 Ga0530510_0056245 3300061734 Bacteria 2842
287 Ga0530510_0110906 3300061734 Bacteria 2009
288 Ga0530510_0127988 3300061734 Bacteria 1867

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049578 Ga0501042_0011551 Ga0501042_0011551_1949_3244 424
2 3300053085 Ga0495619_0056930 Ga0495619_0056930_1277_2575 428
3 3300046511 Ga0495608_0132872 Ga0495608_0132872_35_1432 446
4 3300046642 Ga0495634_0057783 Ga0495634_0057783_1038_2459 451
5 3300005518 Ga0070699_100058475 Ga0070699_1000584755 452
6 3300048912 Ga0496109_0090395 Ga0496109_0090395_44_1441 465
7 3300046517 Ga0495630_0057858 Ga0495630_0057858_1401_2888 466
8 3300006847 Ga0075431_100053116 Ga0075431_1000531163 467
9 3300006852 Ga0075433_10014730 Ga0075433_100147306 467
10 3300006880 Ga0075429_100015870 Ga0075429_1000158703 467
11 3300007076 Ga0075435_100003522 Ga0075435_1000035224 467
12 3300050508 nmdc:mga09592_19778_c1 nmdc:mga09592_19778_c1_3517_5004 467
13 3300050515 nmdc:mga0a205_6383_c1 nmdc:mga0a205_6383_c1_2224_3711 467
14 3300038443 Ga0395901_0241086 Ga0395901_0241086_187_1677 474
15 3300053077 Ga0495601_0046976 Ga0495601_0046976_464_1975 477
16 3300053084 Ga0495595_0034870 Ga0495595_0034870_122_1633 477
17 3300049584 Ga0501068_0025568 Ga0501068_0025568_928_2415 479
18 3300038735 Ga0400485_01088 Ga0400485_01088_2878_4347 480
19 3300037068 Ga0373925_0010333 Ga0373925_0010333_4644_6128 481
20 3300031727 Ga0316576_10000669 Ga0316576_100006692 484
21 3300031733 Ga0316577_10000655 Ga0316577_100006559 484
22 3300031727 Ga0316576_10002864 Ga0316576_100028646 485
23 3300031728 Ga0316578_10001829 Ga0316578_100018296 485
24 3300031733 Ga0316577_10006948 Ga0316577_100069486 485
25 3300032139 Ga0316580_10013974 Ga0316580_100139743 485
26 3300035398 Ga0316574_0012494 Ga0316574_0012494_285_1769 485
27 3300036712 Ga0316584_0007611 Ga0316584_0007611_2697_4181 485
28 3300039453 Ga0436362_0996438 Ga0436362_0996438_460_1947 485
29 3300050492 nmdc:mga0yw44_4507_c1 nmdc:mga0yw44_4507_c1_662_2149 485
30 3300005536 Ga0070697_100005521 Ga0070697_10000552111 486
31 3300039062 Ga0400483_109457 Ga0400483_109457_690_2204 486
32 3300039062 Ga0400483_270897 Ga0400483_270897_5506_7020 486
33 3300053153 Ga0500616_0004464 Ga0500616_0004464_5828_7300 486
34 3300060353 Ga0501082_0096567 Ga0501082_0096567_185_1681 486
35 3300061734 Ga0530510_0056245 Ga0530510_0056245_455_1951 486
36 3300006847 Ga0075431_100212493 Ga0075431_1002124932 489
37 3300048917 Ga0496114_0114004 Ga0496114_0114004_368_1837 489
38 3300046475 Ga0495639_0043819 Ga0495639_0043819_463_1947 490
39 3300046681 Ga0495647_0017747 Ga0495647_0017747_651_2135 490
40 3300005440 Ga0070705_100021091 Ga0070705_1000210912 491
41 3300005445 Ga0070708_100023290 Ga0070708_1000232904 491
42 3300005467 Ga0070706_100027892 Ga0070706_1000278923 491
43 3300005467 Ga0070706_100048956 Ga0070706_1000489563 491
44 3300005471 Ga0070698_100015415 Ga0070698_1000154152 491
45 3300005545 Ga0070695_100016320 Ga0070695_1000163202 491
46 3300005546 Ga0070696_100085057 Ga0070696_1000850572 491
47 3300006844 Ga0075428_100179239 Ga0075428_1001792392 491
48 3300006847 Ga0075431_100230860 Ga0075431_1002308602 491
49 3300009098 Ga0105245_10079652 Ga0105245_100796523 491
50 3300025910 Ga0207684_10019926 Ga0207684_100199265 491
51 3300025910 Ga0207684_10020501 Ga0207684_100205014 491
52 3300028800 Ga0265338_10002533 Ga0265338_1000253313 491
53 3300031241 Ga0265325_10002228 Ga0265325_100022281 491
54 3300031249 Ga0265339_10010516 Ga0265339_100105163 491
55 3300031595 Ga0265313_10006790 Ga0265313_100067906 491
56 3300035692 Ga0373935_0067996 Ga0373935_0067996_77_1567 491
57 3300035695 Ga0373927_0082204 Ga0373927_0082204_302_1792 491
58 3300042010 Ga0439452_003893 Ga0439452_003893_2333_3820 491
59 3300044693 Ga0466961_0104435 Ga0466961_0104435_110_1597 491
60 3300046517 Ga0495630_0008700 Ga0495630_0008700_4962_6449 491
61 3300047322 Ga0495680_0043335 Ga0495680_0043335_387_1874 491
62 3300048904 Ga0496101_0005622 Ga0496101_0005622_2038_3525 491
63 3300048905 Ga0496102_0008387 Ga0496102_0008387_2872_4359 491
64 3300048907 Ga0496104_0039221 Ga0496104_0039221_2354_3841 491
65 3300048907 Ga0496104_0053696 Ga0496104_0053696_997_2484 491
66 3300048911 Ga0496108_0029459 Ga0496108_0029459_1175_2665 491
67 3300048915 Ga0496112_0003384 Ga0496112_0003384_7081_8571 491
68 3300048915 Ga0496112_0017463 Ga0496112_0017463_4592_6082 491
69 3300048917 Ga0496114_0077349 Ga0496114_0077349_65_1552 491
70 3300048918 Ga0496115_0043807 Ga0496115_0043807_601_2088 491
71 3300049571 Ga0501034_0156011 Ga0501034_0156011_17_1504 491
72 3300049589 Ga0501073_0104511 Ga0501073_0104511_456_1943 491
73 3300050490 nmdc:mga03n38_25508_c1 nmdc:mga03n38_25508_c1_724_2211 491
74 3300050510 nmdc:mga06r32_21278_c1 nmdc:mga06r32_21278_c1_2750_4237 491
75 3300053077 Ga0495601_0006224 Ga0495601_0006224_2227_3714 491
76 3300053085 Ga0495619_0032305 Ga0495619_0032305_829_2319 491
77 3300054114 Ga0501084_0000020 Ga0501084_0000020_61229_62716 491
78 3300061734 Ga0530510_0110906 Ga0530510_0110906_116_1606 491
79 3300005445 Ga0070708_100002013 Ga0070708_1000020132 493
80 3300005356 Ga0070674_100119116 Ga0070674_1001191162 494
81 3300005459 Ga0068867_100004800 Ga0068867_1000048003 494
82 3300005844 Ga0068862_100029898 Ga0068862_1000298983 494
83 3300005844 Ga0068862_100103954 Ga0068862_1001039543 494
84 3300006038 Ga0075365_10001217 Ga0075365_100012173 494
85 3300006038 Ga0075365_10001559 Ga0075365_1000155912 494
86 3300006042 Ga0075368_10008884 Ga0075368_100088842 494
87 3300006048 Ga0075363_100007982 Ga0075363_1000079823 494
88 3300006051 Ga0075364_10016695 Ga0075364_100166953 494
89 3300006051 Ga0075364_10029563 Ga0075364_100295633 494
90 3300009098 Ga0105245_10025030 Ga0105245_100250305 494
91 3300009148 Ga0105243_10080906 Ga0105243_100809062 494
92 3300009553 Ga0105249_10040981 Ga0105249_100409814 494
93 3300013297 Ga0157378_10013158 Ga0157378_100131582 494
94 3300013306 Ga0163162_10115654 Ga0163162_101156543 494
95 3300026088 Ga0207641_10013010 Ga0207641_100130102 494
96 3300026089 Ga0207648_10007388 Ga0207648_100073884 494
97 3300028381 Ga0268264_10007596 Ga0268264_100075962 494
98 3300031727 Ga0316576_10055707 Ga0316576_100557073 494
99 3300031995 Ga0307409_100006765 Ga0307409_1000067653 494
100 3300035398 Ga0316574_0037767 Ga0316574_0037767_480_1964 494
101 3300039453 Ga0436362_1235515 Ga0436362_1235515_1123_2610 494
102 3300042876 Ga0451577_0002133 Ga0451577_0002133_3377_4861 494
103 3300044712 Ga0453684_0006714 Ga0453684_0006714_19808_21292 494
104 3300046516 Ga0495628_0067440 Ga0495628_0067440_922_2409 494
105 3300048904 Ga0496101_0035671 Ga0496101_0035671_186_1670 494
106 3300048905 Ga0496102_0074662 Ga0496102_0074662_1498_2982 494
107 3300048907 Ga0496104_0061242 Ga0496104_0061242_1872_3356 494
108 3300048909 Ga0496106_0035971 Ga0496106_0035971_1550_3034 494
109 3300048911 Ga0496108_0037135 Ga0496108_0037135_1720_3204 494
110 3300048913 Ga0496110_0011977 Ga0496110_0011977_5143_6627 494
111 3300048913 Ga0496110_0034798 Ga0496110_0034798_424_1908 494
112 3300048914 Ga0496111_0004058 Ga0496111_0004058_5159_6643 494
113 3300048917 Ga0496114_0036251 Ga0496114_0036251_153_1637 494
114 3300049571 Ga0501034_0025083 Ga0501034_0025083_908_2392 494
115 3300049592 Ga0501076_0064033 Ga0501076_0064033_930_2414 494
116 3300050489 nmdc:mga03683_20317_c1 nmdc:mga03683_20317_c1_644_2128 494
117 3300050490 nmdc:mga03n38_13100_c1 nmdc:mga03n38_13100_c1_374_1858 494
118 3300050491 nmdc:mga00v17_119247_c1 nmdc:mga00v17_119247_c1_13_1497 494
119 3300050491 nmdc:mga00v17_650_c1 nmdc:mga00v17_650_c1_17304_18788 494
120 3300050492 nmdc:mga0yw44_13797_c1 nmdc:mga0yw44_13797_c1_1923_3407 494
121 3300050492 nmdc:mga0yw44_9752_c1 nmdc:mga0yw44_9752_c1_2897_4381 494
122 3300053096 Ga0500641_0003134 Ga0500641_0003134_3564_5054 494
123 3300053139 Ga0500568_0000132 Ga0500568_0000132_22623_24134 494
124 3300053139 Ga0500568_0015682 Ga0500568_0015682_1488_2972 494
125 3300053153 Ga0500616_0000813 Ga0500616_0000813_21455_22939 494
126 3300005355 Ga0070671_100064217 Ga0070671_1000642172 495
127 3300006038 Ga0075365_10002354 Ga0075365_100023548 495
128 3300009098 Ga0105245_10192980 Ga0105245_101929802 495
129 3300035112 Ga0373932_0001689 Ga0373932_0001689_3143_4630 495
130 3300035691 Ga0373931_0000005 Ga0373931_0000005_56185_57672 495
131 3300035691 Ga0373931_0000051 Ga0373931_0000051_849_2336 495
132 3300044684 Ga0466966_0020436 Ga0466966_0020436_1583_3079 495
133 3300049823 Ga0501044_0000319 Ga0501044_0000319_7956_9443 495
134 3300050492 nmdc:mga0yw44_1188_c1 nmdc:mga0yw44_1188_c1_3344_4831 495
135 3300053094 Ga0500566_0000568 Ga0500566_0000568_9954_11441 495
136 3300005435 Ga0070714_100163446 Ga0070714_1001634462 496
137 3300025925 Ga0207650_10114186 Ga0207650_101141862 496
138 3300031727 Ga0316576_10066023 Ga0316576_100660233 497
139 3300031727 Ga0316576_10114336 Ga0316576_101143363 497
140 3300031728 Ga0316578_10028151 Ga0316578_100281512 497
141 3300031728 Ga0316578_10043554 Ga0316578_100435542 497
142 3300031733 Ga0316577_10025926 Ga0316577_100259262 497
143 3300032139 Ga0316580_10004609 Ga0316580_100046095 497
144 3300035398 Ga0316574_0005124 Ga0316574_0005124_4534_6027 497
145 3300035398 Ga0316574_0008065 Ga0316574_0008065_2389_3882 497
146 3300035398 Ga0316574_0035798 Ga0316574_0035798_1297_2790 497
147 3300036647 Ga0316582_0088608 Ga0316582_0088608_233_1726 497
148 3300036712 Ga0316584_0001543 Ga0316584_0001543_11540_13033 497
149 3300039062 Ga0400483_023979 Ga0400483_023979_4557_6068 497
150 3300039062 Ga0400483_117918 Ga0400483_117918_805_2316 497
151 3300039062 Ga0400483_167087 Ga0400483_167087_757_2268 497
152 3300039062 Ga0400483_196206 Ga0400483_196206_1416_2927 497
153 3300039062 Ga0400483_279754 Ga0400483_279754_38370_39881 497
154 3300049585 Ga0501069_0000168 Ga0501069_0000168_5197_6690 497
155 3300049586 Ga0501070_0000030 Ga0501070_0000030_56115_57608 497
156 3300049590 Ga0501074_0097220 Ga0501074_0097220_72_1565 497
157 3300049742 Ga0501080_0001263 Ga0501080_0001263_14412_15905 497
158 3300009094 Ga0111539_10064306 Ga0111539_100643063 498
159 3300027907 Ga0207428_10031703 Ga0207428_100317033 498
160 3300047320 Ga0495672_0004945 Ga0495672_0004945_68_1570 498
161 3300049568 Ga0501031_0018639 Ga0501031_0018639_2199_3716 498
162 3300049568 Ga0501031_0082826 Ga0501031_0082826_448_1956 498
163 3300049569 Ga0501032_0001945 Ga0501032_0001945_12735_14252 498
164 3300049570 Ga0501033_0033055 Ga0501033_0033055_1682_3199 498
165 3300049572 Ga0501036_0128479 Ga0501036_0128479_453_1961 498
166 3300049573 Ga0501037_0006303 Ga0501037_0006303_3219_4736 498
167 3300049574 Ga0501038_0013008 Ga0501038_0013008_4779_6296 498
168 3300049574 Ga0501038_0078695 Ga0501038_0078695_89_1597 498
169 3300049575 Ga0501039_0003383 Ga0501039_0003383_8429_9946 498
170 3300049576 Ga0501040_0004317 Ga0501040_0004317_5868_7385 498
171 3300049577 Ga0501041_0037765 Ga0501041_0037765_1082_2599 498
172 3300049579 Ga0501043_0020194 Ga0501043_0020194_441_1958 498
173 3300049580 Ga0501046_0013369 Ga0501046_0013369_1397_2914 498
174 3300049582 Ga0501048_0015362 Ga0501048_0015362_53_1570 498
175 3300049586 Ga0501070_0001494 Ga0501070_0001494_11130_12647 498
176 3300049587 Ga0501071_0014925 Ga0501071_0014925_428_1945 498
177 3300049588 Ga0501072_0001216 Ga0501072_0001216_2745_4262 498
178 3300049591 Ga0501075_0003039 Ga0501075_0003039_7858_9375 498
179 3300049591 Ga0501075_0094406 Ga0501075_0094406_245_1753 498
180 3300049592 Ga0501076_0004685 Ga0501076_0004685_7114_8631 498
181 3300049592 Ga0501076_0104598 Ga0501076_0104598_567_2075 498
182 3300049741 Ga0501079_0007203 Ga0501079_0007203_5787_7304 498
183 3300049742 Ga0501080_0014633 Ga0501080_0014633_5210_6727 498
184 3300049743 Ga0501081_0008844 Ga0501081_0008844_3075_4592 498
185 3300049823 Ga0501044_0000676 Ga0501044_0000676_12162_13679 498
186 3300049824 Ga0501045_0013114 Ga0501045_0013114_1411_2928 498
187 3300049824 Ga0501045_0130801 Ga0501045_0130801_80_1600 498
188 3300050511 nmdc:mga08y16_25989_c1 nmdc:mga08y16_25989_c1_3076_4593 498
189 3300054114 Ga0501084_0080306 Ga0501084_0080306_187_1695 498
190 3300060353 Ga0501082_0053178 Ga0501082_0053178_1967_3475 498
191 3300061734 Ga0530510_0127988 Ga0530510_0127988_144_1652 498
192 3300045976 Ga0466967_0094435 Ga0466967_0094435_919_2439 500
193 3300049571 Ga0501034_0001349 Ga0501034_0001349_26307_27809 500
194 3300049571 Ga0501034_0003176 Ga0501034_0003176_9922_11424 500
195 3300049571 Ga0501034_0120368 Ga0501034_0120368_787_2289 500
196 3300031995 Ga0307409_100001873 Ga0307409_10000187310 502
197 3300032126 Ga0307415_100025455 Ga0307415_1000254554 502
198 3300036401 Ga0373937_0017613 Ga0373937_0017613_583_2091 502
199 3300046462 Ga0495651_0013504 Ga0495651_0013504_3274_4782 502
200 3300046675 Ga0495657_0001706 Ga0495657_0001706_9187_10695 502
201 3300047317 Ga0495604_0039150 Ga0495604_0039150_617_2125 502
202 3300049571 Ga0501034_0000312 Ga0501034_0000312_26201_27709 502
203 3300049584 Ga0501068_0000667 Ga0501068_0000667_8993_10501 502
204 3300049589 Ga0501073_0012657 Ga0501073_0012657_2670_4178 502
205 3300049590 Ga0501074_0002153 Ga0501074_0002153_5628_7136 502
206 3300049742 Ga0501080_0005255 Ga0501080_0005255_83_1591 502
207 3300053084 Ga0495595_0010451 Ga0495595_0010451_1200_2708 502
208 3300053085 Ga0495619_0005863 Ga0495619_0005863_5796_7304 502
209 3300060353 Ga0501082_0185378 Ga0501082_0185378_54_1562 502
210 3300031727 Ga0316576_10014401 Ga0316576_100144012 503
211 3300035398 Ga0316574_0002995 Ga0316574_0002995_3732_5243 503
212 3300036647 Ga0316582_0004262 Ga0316582_0004262_5332_6843 503
213 3300036712 Ga0316584_0070989 Ga0316584_0070989_814_2325 503
214 3300048917 Ga0496114_0067441 Ga0496114_0067441_224_1735 503
215 3300049571 Ga0501034_0167595 Ga0501034_0167595_620_2131 503
216 3300049585 Ga0501069_0029841 Ga0501069_0029841_235_1746 503
217 3300049586 Ga0501070_0004183 Ga0501070_0004183_5298_6809 503
218 3300049589 Ga0501073_0002645 Ga0501073_0002645_3242_4753 503
219 3300049590 Ga0501074_0027276 Ga0501074_0027276_2583_4094 503
220 3300049741 Ga0501079_0025657 Ga0501079_0025657_2334_3845 503
221 3300049742 Ga0501080_0018599 Ga0501080_0018599_2715_4226 503
222 3300049744 Ga0501083_0000155 Ga0501083_0000155_43336_44847 503
223 3300050494 nmdc:mga06z11_51155_c1 nmdc:mga06z11_51155_c1_234_1745 503
224 3300053080 Ga0500635_0004063 Ga0500635_0004063_1135_2646 503
225 3300054114 Ga0501084_0000314 Ga0501084_0000314_3063_4574 503
226 3300006051 Ga0075364_10002418 Ga0075364_100024182 504
227 3300006051 Ga0075364_10041290 Ga0075364_100412902 504
228 3300009098 Ga0105245_10002773 Ga0105245_100027737 504
229 3300032126 Ga0307415_100077856 Ga0307415_1000778562 504
230 3300050491 nmdc:mga00v17_12854_c1 nmdc:mga00v17_12854_c1_756_2270 504
231 3300003911 JGI25405J52794_10007014 JGI25405J52794_100070142 505
232 3300005937 Ga0081455_10003054 Ga0081455_100030543 505
233 3300005937 Ga0081455_10017807 Ga0081455_100178077 505
234 3300005981 Ga0081538_10012628 Ga0081538_100126286 505
235 3300005981 Ga0081538_10015711 Ga0081538_100157112 505
236 3300005981 Ga0081538_10033329 Ga0081538_100333293 505
237 3300006844 Ga0075428_100001516 Ga0075428_1000015163 505
238 3300006844 Ga0075428_100010421 Ga0075428_1000104213 505
239 3300006844 Ga0075428_100082882 Ga0075428_1000828823 505
240 3300006846 Ga0075430_100001068 Ga0075430_10000106818 505
241 3300006846 Ga0075430_100026361 Ga0075430_1000263615 505
242 3300006846 Ga0075430_100129345 Ga0075430_1001293451 505
243 3300006846 Ga0075430_100167377 Ga0075430_1001673772 505
244 3300006847 Ga0075431_100027285 Ga0075431_1000272853 505
245 3300006847 Ga0075431_100050421 Ga0075431_1000504213 505
246 3300006880 Ga0075429_100000303 Ga0075429_10000030326 505
247 3300006880 Ga0075429_100014427 Ga0075429_1000144274 505
248 3300006880 Ga0075429_100053209 Ga0075429_1000532092 505
249 3300009094 Ga0111539_10053495 Ga0111539_100534956 505
250 3300009147 Ga0114129_10000100 Ga0114129_100001009 505
251 3300009147 Ga0114129_10019673 Ga0114129_100196734 505
252 3300009147 Ga0114129_10053147 Ga0114129_100531473 505
253 3300009147 Ga0114129_10157172 Ga0114129_101571723 505
254 3300027907 Ga0207428_10051249 Ga0207428_100512491 505
255 3300042008 Ga0439450_000487 Ga0439450_000487_3278_4795 505
256 3300046517 Ga0495630_0053272 Ga0495630_0053272_1485_3002 505
257 3300046689 Ga0495613_0019455 Ga0495613_0019455_268_1785 505
258 3300049572 Ga0501036_0004581 Ga0501036_0004581_7323_8840 505
259 3300049573 Ga0501037_0055593 Ga0501037_0055593_792_2309 505
260 3300049574 Ga0501038_0030222 Ga0501038_0030222_2872_4389 505
261 3300049576 Ga0501040_0048652 Ga0501040_0048652_659_2176 505
262 3300049578 Ga0501042_0076856 Ga0501042_0076856_738_2255 505
263 3300049582 Ga0501048_0051952 Ga0501048_0051952_332_1849 505
264 3300049588 Ga0501072_0001611 Ga0501072_0001611_2740_4257 505
265 3300049592 Ga0501076_0002311 Ga0501076_0002311_681_2198 505
266 3300049741 Ga0501079_0013056 Ga0501079_0013056_2950_4467 505
267 3300049823 Ga0501044_0140409 Ga0501044_0140409_104_1621 505
268 3300049824 Ga0501045_0037887 Ga0501045_0037887_207_1724 505
269 3300050507 nmdc:mga05p37_168244_c1 nmdc:mga05p37_168244_c1_885_2402 505
270 3300050507 nmdc:mga05p37_174112_c1 nmdc:mga05p37_174112_c1_1015_2532 505
271 3300050507 nmdc:mga05p37_39431_c1 nmdc:mga05p37_39431_c1_1519_3036 505
272 3300050507 nmdc:mga05p37_804_c2 nmdc:mga05p37_804_c2_7017_8534 505
273 3300050507 nmdc:mga05p37_86064_c1 nmdc:mga05p37_86064_c1_2295_3812 505
274 3300050508 nmdc:mga09592_1658_c1 nmdc:mga09592_1658_c1_5297_6814 505
275 3300050508 nmdc:mga09592_22018_c1 nmdc:mga09592_22018_c1_2640_4157 505
276 3300050508 nmdc:mga09592_33511_c1 nmdc:mga09592_33511_c1_2582_4099 505
277 3300050508 nmdc:mga09592_73020_c1 nmdc:mga09592_73020_c1_89_1606 505
278 3300050509 nmdc:mga0qj67_12340_c1 nmdc:mga0qj67_12340_c1_2194_3711 505
279 3300050509 nmdc:mga0qj67_42571_c1 nmdc:mga0qj67_42571_c1_1812_3329 505
280 3300050509 nmdc:mga0qj67_9407_c1 nmdc:mga0qj67_9407_c1_5297_6814 505
281 3300050510 nmdc:mga06r32_532_c1 nmdc:mga06r32_532_c1_457_1974 505
282 3300050510 nmdc:mga06r32_7283_c1 nmdc:mga06r32_7283_c1_2802_4319 505
283 3300050511 nmdc:mga08y16_34959_c1 nmdc:mga08y16_34959_c1_2945_4462 505
284 3300053094 Ga0500566_0061556 Ga0500566_0061556_228_1745 505
285 3300053153 Ga0500616_0004781 Ga0500616_0004781_5701_7221 505
286 3300054114 Ga0501084_0006165 Ga0501084_0006165_7653_9170 505
287 3300061734 Ga0530510_0022734 Ga0530510_0022734_624_2141 505
288 3300003911 JGI25405J52794_10006262 JGI25405J52794_100062622 560

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03136

Pup_ligase

Pup-ligase protein

364

517

0.96

PF03136

Pup_ligase

Pup-ligase protein

5

369

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oyh-assembly1.cif.gz_A crystal structure of depupylase dop in complex with pup and adp/tetrafluoromagnesate 0.938 3 559
7oyf-assembly1.cif.gz_A crystal structure of depupylase dop in complex with pup and adp/trifluoromagnesate 0.9331 3 559
7oy3-assembly1.cif.gz_A crystal structure of depupylase dop in complex with phosphorylated pup and adp 0.9324 3 559
4b0s-assembly1.cif.gz_A structure of the deamidase-depupylase dop of the prokaryotic ubiquitin-like modification pathway in complex with atp 0.9314 3 558
4b0s-assembly1.cif.gz_A structure of the deamidase-depupylase dop of the prokaryotic ubiquitin-like modification pathway in complex with atp 0.9273 3 558
ID Description Score Start End Superfamily
af_P9WNU7_4_423_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.881 6 513 3.30.590.20
af_P9WNU9_3_459_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.8774 6 516 3.30.590.20
af_P9WNU9_3_459_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.8724 6 516 3.30.590.20
af_P9WNU7_4_423_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.869 6 513 3.30.590.20
af_Q555D9_141_219_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.5229 303 345 1.25.40.10

Feature Viewer

pLDDT pTM Quality
84.92 0.84 High
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Predicted Structure (AlphaFold2)

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