F388216

General Info

Members Datasets Scaffolds Average Seq Length
287 153 574 792

Family's Representative Sequence

Representative Sequence 3300048906|Ga0496103_0045820|Ga0496103_0045820_17_2665
Length 855
Sequence VDRDPALAAVGAVQRNVDARAAEVALARAGGQPRRGRRGGRAAAEEGERYDKVHRDTNRPRKSDRLDLDIRILGNTLSSMPNGERSGFGSQRKAEQFALQGEWKRLGRAATFVAVITSPATFAWLHGINDIPVLWSLLITFILVIAFRGFIDVVAHKLIPRASTYGVGRDLMEADIVAQRRVWYWRTRFRQLFRAVLIIGATLGVVYALGGTVSDLVNALPVILQALIGFGLQIPLFFLINILILFGPLLFFGLKQMKGYEPGDADWGVKLDDIRGQAEPKADVTKVIELWSAGDEFRKAGGKPERGLLFIGAPGTGKTMLSKGIATSFNSPIVTMPGSGFAQTFIGMDVVVVMFLIRKARKLARKWGNTCMIFIDEIDAVGMRRQALQNYGFQPVGSGFDERPMYGPWGALTPTGDLILEDRQWRDRLFASRAVPSGPIGPGFIGATRDRIQNVMFPGMGGGGGQLALNQLLVQMDGVDEPPFMRKFFTNRINTFLDATYIIPTRIKRLRLRLKPPKPRGEQIYFIGATNVPLDALDPALIRPGRMGRHIWFRTPTKDDRMDIFDLYLGKVSHEENLDRPERRDELARMTNGYSPAMIEQVCSMALTYAHSDGRAEFDRKDLVEAMTTIESGTAVGISYMEQETRAVAIHEAGHAVASHVYMHDVLSTRLSIRMRGRSLGHHQAIKKEEQFSKWRHQEVGELVWSLGAMAAEHVFYGENSDGVGGDIQSATWIASRMVGASGMGPEPLDLRGRVPRIGLRIMNRASGGSMMESDPIARVLGDPSKRKAAAQVIGQAYITARCCVLHNREAVAGVADALVQRKELFGDEVVELLEAAEPRAPVIDVLDEEIWPKL

Samples

Sample ID Description Type Environment
1 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
149 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.61
Metatranscriptomes 1.39
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.74
Nodule 0
Rhizoplane 12.54
Rhizosphere 84.67
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496103_0045820 3300048906 Bacteria 2699
2 JGI25407J50210_10001065 3300003373 Bacteria 6030
3 Ga0070658_10021525 3300005327 Bacteria 5168
4 Ga0070683_100004857 3300005329 Bacteria 11133
5 Ga0070683_100017157 3300005329 Bacteria 6394
6 Ga0070683_100034593 3300005329 Bacteria 4617
7 Ga0070683_100037398 3300005329 Bacteria 4443
8 Ga0070683_100069484 3300005329 Bacteria 3284
9 Ga0070680_100026620 3300005336 Bacteria 4625
10 Ga0070682_100017071 3300005337 Bacteria 4228
11 Ga0070682_100029743 3300005337 Bacteria 3291
12 Ga0070660_100019780 3300005339 Bacteria 4939
13 Ga0070687_100011588 3300005343 Bacteria 3863
14 Ga0070661_100037065 3300005344 Bacteria 3547
15 Ga0070668_100002260 3300005347 Bacteria 14185
16 Ga0070714_100020072 3300005435 Bacteria 5452
17 Ga0070701_10013129 3300005438 Bacteria 3759
18 Ga0070678_100005860 3300005456 Bacteria 7148
19 Ga0070681_10003519 3300005458 Bacteria 14668
20 Ga0070681_10024458 3300005458 Bacteria 6081
21 Ga0070684_100002778 3300005535 Bacteria 12962
22 Ga0070684_100007210 3300005535 Bacteria 8637
23 Ga0070684_100098217 3300005535 Eukaryota 2612
24 Ga0070696_100020774 3300005546 Bacteria 4449
25 Ga0070693_100001407 3300005547 Bacteria 10846
26 Ga0070664_100012004 3300005564 Bacteria 7036
27 Ga0070664_100028412 3300005564 Bacteria 4652
28 Ga0070664_100049041 3300005564 Bacteria 3570
29 Ga0070664_100080450 3300005564 Bacteria 2806
30 Ga0068857_100009424 3300005577 Bacteria 8473
31 Ga0068857_100069917 3300005577 Bacteria 3126
32 Ga0068856_100003081 3300005614 Bacteria 17023
33 Ga0068856_100041404 3300005614 Bacteria 4527
34 Ga0068852_100040229 3300005616 Bacteria 3942
35 Ga0068852_100048716 3300005616 Bacteria 3622
36 Ga0081455_10007935 3300005937 Bacteria 11107
37 Ga0081455_10010024 3300005937 Bacteria 9683
38 Ga0081455_10033264 3300005937 Bacteria 4635
39 Ga0081538_10000544 3300005981 Bacteria 41533
40 Ga0081538_10000785 3300005981 Bacteria 34657
41 Ga0081538_10009328 3300005981 Bacteria 8207
42 Ga0081538_10017969 3300005981 Bacteria 5338
43 Ga0081540_1001250 3300005983 Bacteria 22199
44 Ga0081540_1003958 3300005983 Bacteria 11507
45 Ga0081540_1008637 3300005983 Bacteria 7098
46 Ga0081539_10001584 3300005985 Bacteria 37596
47 Ga0081539_10002963 3300005985 Bacteria 22294
48 Ga0081539_10005201 3300005985 Bacteria 13497
49 Ga0081539_10008219 3300005985 Bacteria 9177
50 Ga0070717_10046006 3300006028 Bacteria 3569
51 Ga0070717_10049543 3300006028 Bacteria 3448
52 Ga0075364_10009547 3300006051 Bacteria 5824
53 Ga0070715_10004026 3300006163 Bacteria 4767
54 Ga0070716_100016534 3300006173 Bacteria 3810
55 Ga0068871_100058859 3300006358 Bacteria 3129
56 Ga0075428_100006201 3300006844 Bacteria 13298
57 Ga0075428_100034596 3300006844 Bacteria 5571
58 Ga0075433_10002007 3300006852 Bacteria 15334
59 Ga0075434_100001220 3300006871 Bacteria 21365
60 Ga0075434_100025869 3300006871 Bacteria 5744
61 Ga0105240_10003205 3300009093 Bacteria 25672
62 Ga0105240_10009224 3300009093 Bacteria 13997
63 Ga0111539_10075998 3300009094 Bacteria 3955
64 Ga0105247_10015606 3300009101 Bacteria 4549
65 Ga0114129_10012973 3300009147 Bacteria 11862
66 Ga0114129_10064387 3300009147 Bacteria 5116
67 Ga0114129_10116275 3300009147 Bacteria 3686
68 Ga0105241_10031768 3300009174 Bacteria 3954
69 Ga0105242_10017398 3300009176 Bacteria 5602
70 Ga0105248_10075282 3300009177 Bacteria 3794
71 Ga0105238_10052706 3300009551 Bacteria 4089
72 Ga0105239_10064446 3300010375 Bacteria 4023
73 Ga0105246_10004955 3300011119 Bacteria 8103
74 Ga0157370_10002608 3300013104 Bacteria 21678
75 Ga0157369_10016491 3300013105 Bacteria 8308
76 Ga0157369_10025873 3300013105 Bacteria 6510
77 Ga0163162_10053631 3300013306 Bacteria 4053
78 Ga0163162_10122434 3300013306 Bacteria 2706
79 Ga0157377_10012398 3300014745 Bacteria 4286
80 Ga0157376_10047231 3300014969 Bacteria 3553
81 Ga0197907_10474999 3300020069 Bacteria 3677
82 Ga0206356_10563514 3300020070 Bacteria 4147
83 Ga0206356_11828652 3300020070 Bacteria 4985
84 Ga0224712_10002688 3300022467 Bacteria 4453
85 Ga0207647_10033371 3300025904 Bacteria 3296
86 Ga0207685_10006391 3300025905 Bacteria 3205
87 Ga0207705_10039772 3300025909 Bacteria 3371
88 Ga0207707_10003482 3300025912 Bacteria 13924
89 Ga0207707_10047834 3300025912 Bacteria 3725
90 Ga0207695_10055207 3300025913 Bacteria 4141
91 Ga0207693_10005943 3300025915 Bacteria 10129
92 Ga0207693_10006106 3300025915 Bacteria 9982
93 Ga0207693_10022323 3300025915 Bacteria 5028
94 Ga0207660_10023156 3300025917 Bacteria 4192
95 Ga0207662_10008201 3300025918 Bacteria 5715
96 Ga0207657_10040505 3300025919 Bacteria 4127
97 Ga0207657_10045116 3300025919 Bacteria 3871
98 Ga0207649_10023911 3300025920 Bacteria 3545
99 Ga0207652_10055588 3300025921 Bacteria 3405
100 Ga0207687_10028503 3300025927 Bacteria 3751
101 Ga0207700_10014430 3300025928 Bacteria 5177
102 Ga0207664_10002612 3300025929 Bacteria 11927
103 Ga0207664_10003085 3300025929 Bacteria 11067
104 Ga0207664_10020648 3300025929 Bacteria 4886
105 Ga0207664_10026507 3300025929 Bacteria 4382
106 Ga0207706_10017930 3300025933 Bacteria 6372
107 Ga0207665_10003357 3300025939 Bacteria 10720
108 Ga0207689_10017083 3300025942 Bacteria 6140
109 Ga0207661_10002628 3300025944 Bacteria 12366
110 Ga0207679_10056535 3300025945 Bacteria 2897
111 Ga0207678_10008341 3300026067 Bacteria 9135
112 Ga0207678_10021803 3300026067 Bacteria 5618
113 Ga0207708_10001058 3300026075 Bacteria 20624
114 Ga0207702_10011621 3300026078 Bacteria 7336
115 Ga0207702_10013054 3300026078 Bacteria 6909
116 Ga0207702_10017015 3300026078 Bacteria 6017
117 Ga0207648_10014827 3300026089 Bacteria 7189
118 Ga0207674_10005350 3300026116 Bacteria 15263
119 Ga0207674_10016512 3300026116 Bacteria 8079
120 Ga0207674_10044113 3300026116 Bacteria 4595
121 Ga0207675_100033716 3300026118 Bacteria 4770
122 Ga0207675_100043361 3300026118 Bacteria 4201
123 Ga0207683_10003559 3300026121 Bacteria 13587
124 Ga0207683_10008727 3300026121 Bacteria 8657
125 Ga0207428_10005966 3300027907 Bacteria 11280
126 Ga0207428_10006103 3300027907 Bacteria 11139
127 Ga0307416_100065314 3300032002 Bacteria 2990
128 Ga0373951_0003305 3300035091 Bacteria 3942
129 Ga0395899_0002146 3300037312 Bacteria 16204
130 Ga0395899_0008114 3300037312 Bacteria 8089
131 Ga0395899_0011712 3300037312 Bacteria 6714
132 Ga0395899_0016728 3300037312 Bacteria 5591
133 Ga0395899_0046588 3300037312 Bacteria 3230
134 Ga0395900_0006336 3300037418 Bacteria 12336
135 Ga0395900_0009388 3300037418 Bacteria 10028
136 Ga0395900_0015056 3300037418 Bacteria 7884
137 Ga0395900_0045693 3300037418 Bacteria 4510
138 Ga0395900_0074619 3300037418 Bacteria 3487
139 Ga0395898_0004499 3300037466 Bacteria 15240
140 Ga0395898_0007530 3300037466 Bacteria 11569
141 Ga0395898_0014201 3300037466 Bacteria 8190
142 Ga0395898_0021002 3300037466 Bacteria 6624
143 Ga0395898_0024083 3300037466 Bacteria 6144
144 Ga0395898_0038788 3300037466 Bacteria 4718
145 Ga0395898_0041246 3300037466 Bacteria 4559
146 Ga0395905_0009085 3300037471 Bacteria 9744
147 Ga0395905_0009318 3300037471 Bacteria 9602
148 Ga0395905_0031990 3300037471 Bacteria 4949
149 Ga0395905_0039618 3300037471 Bacteria 4421
150 Ga0395905_0060825 3300037471 Bacteria 3532
151 Ga0436364_0623169 3300037853 Bacteria 35147
152 Ga0436364_1210507 3300037853 Bacteria 11262
153 Ga0395901_0001428 3300038443 Bacteria 24903
154 Ga0395901_0002070 3300038443 Bacteria 20577
155 Ga0395901_0005332 3300038443 Bacteria 12992
156 Ga0395901_0009489 3300038443 Bacteria 9872
157 Ga0395901_0012459 3300038443 Bacteria 8630
158 Ga0395901_0025550 3300038443 Bacteria 6064
159 Ga0395901_0027191 3300038443 Bacteria 5877
160 Ga0395901_0028217 3300038443 Bacteria 5774
161 Ga0395901_0104355 3300038443 Archaea 2975
162 Ga0436365_1908817 3300039437 Bacteria 5198
163 Ga0466964_0001572 3300044706 Bacteria 7856
164 Ga0466964_0015640 3300044706 Bacteria 2889
165 Ga0466971_0019303 3300044719 Bacteria 3027
166 Ga0466967_0006664 3300045976 Bacteria 8211
167 Ga0466967_0009558 3300045976 Bacteria 7204
168 Ga0466967_0020133 3300045976 Bacteria 5383
169 Ga0466967_0021590 3300045976 Bacteria 5234
170 Ga0466967_0027359 3300045976 Bacteria 4742
171 Ga0466967_0038176 3300045976 Bacteria 4117
172 Ga0466967_0039506 3300045976 Bacteria 4057
173 Ga0466967_0119436 3300045976 Bacteria 2433
174 Ga0495603_0027164 3300046455 Bacteria 3455
175 Ga0495650_0000264 3300046471 Bacteria 101105
176 Ga0495584_0015112 3300046491 Bacteria 3934
177 Ga0495594_0002049 3300046499 Bacteria 10498
178 Ga0495581_0001294 3300047315 Bacteria 13799
179 Ga0495676_0006198 3300047321 Bacteria 10998
180 Ga0495676_0010509 3300047321 Bacteria 8390
181 Ga0496102_0015394 3300048905 Bacteria 6662
182 Ga0496104_0027634 3300048907 Bacteria 5252
183 Ga0496104_0050944 3300048907 Bacteria 3906
184 Ga0496104_0114296 3300048907 Bacteria 2589
185 Ga0496105_0036406 3300048908 Bacteria 4054
186 Ga0496106_0000191 3300048909 Bacteria 43221
187 Ga0496107_0000666 3300048910 Bacteria 19465
188 Ga0496107_0029142 3300048910 Bacteria 3925
189 Ga0496107_0041676 3300048910 Bacteria 3297
190 Ga0496108_0001077 3300048911 Bacteria 21310
191 Ga0496108_0020263 3300048911 Bacteria 5465
192 Ga0496108_0046464 3300048911 Bacteria 3627
193 Ga0496108_0048291 3300048911 Bacteria 3558
194 Ga0496109_0021815 3300048912 Bacteria 5667
195 Ga0496109_0024932 3300048912 Bacteria 5324
196 Ga0496109_0033765 3300048912 Bacteria 4605
197 Ga0496110_0004374 3300048913 Bacteria 10939
198 Ga0496110_0023811 3300048913 Bacteria 5211
199 Ga0496110_0082064 3300048913 Bacteria 2874
200 Ga0496111_0002818 3300048914 Bacteria 10596
201 Ga0496111_0003001 3300048914 Bacteria 10334
202 Ga0496111_0011903 3300048914 Bacteria 5878
203 Ga0496111_0036650 3300048914 Bacteria 3507
204 Ga0496111_0038182 3300048914 Bacteria 3440
205 Ga0496112_0000741 3300048915 Bacteria 22777
206 Ga0496112_0014256 3300048915 Bacteria 7366
207 Ga0496112_0015796 3300048915 Bacteria 7054
208 Ga0496112_0017313 3300048915 Bacteria 6769
209 Ga0496112_0024379 3300048915 Bacteria 5791
210 Ga0496113_0004425 3300048916 Bacteria 8633
211 Ga0496113_0035026 3300048916 Bacteria 3668
212 Ga0496114_0039642 3300048917 Bacteria 3898
213 Ga0496115_0004211 3300048918 Bacteria 10397
214 Ga0496115_0013761 3300048918 Bacteria 6125
215 Ga0496115_0019899 3300048918 Bacteria 5172
216 Ga0501031_0004960 3300049568 Bacteria 8651
217 Ga0501032_0006008 3300049569 Bacteria 8954
218 Ga0501032_0006245 3300049569 Bacteria 8772
219 Ga0501033_0007842 3300049570 Bacteria 8269
220 Ga0501034_0005178 3300049571 Bacteria 14307
221 Ga0501036_0012756 3300049572 Bacteria 6972
222 Ga0501037_0002745 3300049573 Bacteria 12735
223 Ga0501037_0020337 3300049573 Bacteria 4900
224 Ga0501038_0001754 3300049574 Bacteria 20155
225 Ga0501038_0008611 3300049574 Bacteria 9364
226 Ga0501040_0002630 3300049576 Bacteria 11580
227 Ga0501040_0010742 3300049576 Bacteria 5987
228 Ga0501041_0004349 3300049577 Bacteria 8193
229 Ga0501041_0007109 3300049577 Bacteria 6565
230 Ga0501042_0001750 3300049578 Bacteria 12974
231 Ga0501042_0010154 3300049578 Bacteria 6300
232 Ga0501043_0003063 3300049579 Bacteria 13890
233 Ga0501043_0012652 3300049579 Bacteria 6599
234 Ga0501046_0001490 3300049580 Bacteria 22446
235 Ga0501046_0008230 3300049580 Bacteria 9106
236 Ga0501048_0002474 3300049582 Bacteria 14101
237 Ga0501048_0005839 3300049582 Bacteria 9363
238 Ga0501048_0012556 3300049582 Bacteria 6301
239 Ga0501067_0006493 3300049583 Bacteria 6484
240 Ga0501068_0001389 3300049584 Bacteria 12857
241 Ga0501068_0008006 3300049584 Bacteria 5861
242 Ga0501068_0009631 3300049584 Bacteria 5409
243 Ga0501068_0023081 3300049584 Bacteria 3644
244 Ga0501069_0001579 3300049585 Bacteria 11263
245 Ga0501069_0003042 3300049585 Bacteria 8611
246 Ga0501070_0007088 3300049586 Bacteria 9532
247 Ga0501071_0008146 3300049587 Bacteria 6911
248 Ga0501072_0006768 3300049588 Bacteria 8704
249 Ga0501073_0003049 3300049589 Bacteria 12566
250 Ga0501073_0011941 3300049589 Bacteria 6341
251 Ga0501074_0003376 3300049590 Bacteria 11309
252 Ga0501074_0010554 3300049590 Bacteria 6703
253 Ga0501075_0007146 3300049591 Bacteria 7726
254 Ga0501075_0017566 3300049591 Bacteria 5166
255 Ga0501076_0002895 3300049592 Bacteria 11884
256 Ga0501077_0006799 3300049593 Bacteria 7037
257 Ga0501077_0008115 3300049593 Bacteria 6491
258 Ga0501079_0007928 3300049741 Bacteria 8051
259 Ga0501079_0009351 3300049741 Bacteria 7425
260 Ga0501079_0062999 3300049741 Bacteria 2861
261 Ga0501080_0004320 3300049742 Bacteria 12621
262 Ga0501081_0003541 3300049743 Bacteria 9977
263 Ga0501081_0018305 3300049743 Bacteria 4649
264 Ga0501083_0002701 3300049744 Bacteria 12234
265 Ga0501035_0035012 3300049822 Bacteria 4561
266 Ga0501035_0038326 3300049822 Bacteria 4340
267 Ga0501044_0031029 3300049823 Bacteria 5627
268 Ga0501044_0041596 3300049823 Bacteria 4784
269 Ga0501045_0002085 3300049824 Bacteria 13516
270 nmdc:mga0yw44_37755_c1 3300050492 Unclassified 2854
271 nmdc:mga05p37_13214_c1 3300050507 Bacteria 9884
272 nmdc:mga05p37_69029_c1 3300050507 Bacteria 4347
273 nmdc:mga09592_80172_c1 3300050508 Bacteria 2779
274 nmdc:mga0qj67_22386_c1 3300050509 Bacteria 4855
275 nmdc:mga08y16_13815_c1 3300050511 Bacteria 8498
276 nmdc:mga0n895_38110_c1 3300050512 Bacteria 4656
277 nmdc:mga0n895_5732_c1 3300050512 Bacteria 10424
278 nmdc:mga0a205_3597_c1 3300050515 Bacteria 13872
279 Ga0500556_0000607 3300053104 Bacteria 22959
280 Ga0500616_0007971 3300053153 Bacteria 6649
281 Ga0500616_0019586 3300053153 Bacteria 3812
282 Ga0501084_0008001 3300054114 Bacteria 8704
283 Ga0501084_0011210 3300054114 Bacteria 7424
284 Ga0501082_0042878 3300060353 Bacteria 3899
285 Ga0466962_0016769 3300061719 Bacteria 3531
286 Ga0530510_0025968 3300061734 Bacteria 4188
287 Ga0530510_0038832 3300061734 Bacteria 3438
288 Ga0496103_0045820
289 JGI25407J50210_10001065
290 Ga0070658_10021525
291 Ga0070683_100004857
292 Ga0070683_100017157
293 Ga0070683_100034593
294 Ga0070683_100037398
295 Ga0070683_100069484
296 Ga0070680_100026620
297 Ga0070682_100017071
298 Ga0070682_100029743
299 Ga0070660_100019780
300 Ga0070687_100011588
301 Ga0070661_100037065
302 Ga0070668_100002260
303 Ga0070714_100020072
304 Ga0070701_10013129
305 Ga0070678_100005860
306 Ga0070681_10003519
307 Ga0070681_10024458
308 Ga0070684_100002778
309 Ga0070684_100007210
310 Ga0070684_100098217
311 Ga0070696_100020774
312 Ga0070693_100001407
313 Ga0070664_100012004
314 Ga0070664_100028412
315 Ga0070664_100049041
316 Ga0070664_100080450
317 Ga0068857_100009424
318 Ga0068857_100069917
319 Ga0068856_100003081
320 Ga0068856_100041404
321 Ga0068852_100040229
322 Ga0068852_100048716
323 Ga0081455_10007935
324 Ga0081455_10010024
325 Ga0081455_10033264
326 Ga0081538_10000544
327 Ga0081538_10000785
328 Ga0081538_10009328
329 Ga0081538_10017969
330 Ga0081540_1001250
331 Ga0081540_1003958
332 Ga0081540_1008637
333 Ga0081539_10001584
334 Ga0081539_10002963
335 Ga0081539_10005201
336 Ga0081539_10008219
337 Ga0070717_10046006
338 Ga0070717_10049543
339 Ga0075364_10009547
340 Ga0070715_10004026
341 Ga0070716_100016534
342 Ga0068871_100058859
343 Ga0075428_100006201
344 Ga0075428_100034596
345 Ga0075433_10002007
346 Ga0075434_100001220
347 Ga0075434_100025869
348 Ga0105240_10003205
349 Ga0105240_10009224
350 Ga0111539_10075998
351 Ga0105247_10015606
352 Ga0114129_10012973
353 Ga0114129_10064387
354 Ga0114129_10116275
355 Ga0105241_10031768
356 Ga0105242_10017398
357 Ga0105248_10075282
358 Ga0105238_10052706
359 Ga0105239_10064446
360 Ga0105246_10004955
361 Ga0157370_10002608
362 Ga0157369_10016491
363 Ga0157369_10025873
364 Ga0163162_10053631
365 Ga0163162_10122434
366 Ga0157377_10012398
367 Ga0157376_10047231
368 Ga0197907_10474999
369 Ga0206356_10563514
370 Ga0206356_11828652
371 Ga0224712_10002688
372 Ga0207647_10033371
373 Ga0207685_10006391
374 Ga0207705_10039772
375 Ga0207707_10003482
376 Ga0207707_10047834
377 Ga0207695_10055207
378 Ga0207693_10005943
379 Ga0207693_10006106
380 Ga0207693_10022323
381 Ga0207660_10023156
382 Ga0207662_10008201
383 Ga0207657_10040505
384 Ga0207657_10045116
385 Ga0207649_10023911
386 Ga0207652_10055588
387 Ga0207687_10028503
388 Ga0207700_10014430
389 Ga0207664_10002612
390 Ga0207664_10003085
391 Ga0207664_10020648
392 Ga0207664_10026507
393 Ga0207706_10017930
394 Ga0207665_10003357
395 Ga0207689_10017083
396 Ga0207661_10002628
397 Ga0207679_10056535
398 Ga0207678_10008341
399 Ga0207678_10021803
400 Ga0207708_10001058
401 Ga0207702_10011621
402 Ga0207702_10013054
403 Ga0207702_10017015
404 Ga0207648_10014827
405 Ga0207674_10005350
406 Ga0207674_10016512
407 Ga0207674_10044113
408 Ga0207675_100033716
409 Ga0207675_100043361
410 Ga0207683_10003559
411 Ga0207683_10008727
412 Ga0207428_10005966
413 Ga0207428_10006103
414 Ga0307416_100065314
415 Ga0373951_0003305
416 Ga0395899_0002146
417 Ga0395899_0008114
418 Ga0395899_0011712
419 Ga0395899_0016728
420 Ga0395899_0046588
421 Ga0395900_0006336
422 Ga0395900_0009388
423 Ga0395900_0015056
424 Ga0395900_0045693
425 Ga0395900_0074619
426 Ga0395898_0004499
427 Ga0395898_0007530
428 Ga0395898_0014201
429 Ga0395898_0021002
430 Ga0395898_0024083
431 Ga0395898_0038788
432 Ga0395898_0041246
433 Ga0395905_0009085
434 Ga0395905_0009318
435 Ga0395905_0031990
436 Ga0395905_0039618
437 Ga0395905_0060825
438 Ga0436364_0623169
439 Ga0436364_1210507
440 Ga0395901_0001428
441 Ga0395901_0002070
442 Ga0395901_0005332
443 Ga0395901_0009489
444 Ga0395901_0012459
445 Ga0395901_0025550
446 Ga0395901_0027191
447 Ga0395901_0028217
448 Ga0395901_0104355
449 Ga0436365_1908817
450 Ga0466964_0001572
451 Ga0466964_0015640
452 Ga0466971_0019303
453 Ga0466967_0006664
454 Ga0466967_0009558
455 Ga0466967_0020133
456 Ga0466967_0021590
457 Ga0466967_0027359
458 Ga0466967_0038176
459 Ga0466967_0039506
460 Ga0466967_0119436
461 Ga0495603_0027164
462 Ga0495650_0000264
463 Ga0495584_0015112
464 Ga0495594_0002049
465 Ga0495581_0001294
466 Ga0495676_0006198
467 Ga0495676_0010509
468 Ga0496102_0015394
469 Ga0496104_0027634
470 Ga0496104_0050944
471 Ga0496104_0114296
472 Ga0496105_0036406
473 Ga0496106_0000191
474 Ga0496107_0000666
475 Ga0496107_0029142
476 Ga0496107_0041676
477 Ga0496108_0001077
478 Ga0496108_0020263
479 Ga0496108_0046464
480 Ga0496108_0048291
481 Ga0496109_0021815
482 Ga0496109_0024932
483 Ga0496109_0033765
484 Ga0496110_0004374
485 Ga0496110_0023811
486 Ga0496110_0082064
487 Ga0496111_0002818
488 Ga0496111_0003001
489 Ga0496111_0011903
490 Ga0496111_0036650
491 Ga0496111_0038182
492 Ga0496112_0000741
493 Ga0496112_0014256
494 Ga0496112_0015796
495 Ga0496112_0017313
496 Ga0496112_0024379
497 Ga0496113_0004425
498 Ga0496113_0035026
499 Ga0496114_0039642
500 Ga0496115_0004211
501 Ga0496115_0013761
502 Ga0496115_0019899
503 Ga0501031_0004960
504 Ga0501032_0006008
505 Ga0501032_0006245
506 Ga0501033_0007842
507 Ga0501034_0005178
508 Ga0501036_0012756
509 Ga0501037_0002745
510 Ga0501037_0020337
511 Ga0501038_0001754
512 Ga0501038_0008611
513 Ga0501040_0002630
514 Ga0501040_0010742
515 Ga0501041_0004349
516 Ga0501041_0007109
517 Ga0501042_0001750
518 Ga0501042_0010154
519 Ga0501043_0003063
520 Ga0501043_0012652
521 Ga0501046_0001490
522 Ga0501046_0008230
523 Ga0501048_0002474
524 Ga0501048_0005839
525 Ga0501048_0012556
526 Ga0501067_0006493
527 Ga0501068_0001389
528 Ga0501068_0008006
529 Ga0501068_0009631
530 Ga0501068_0023081
531 Ga0501069_0001579
532 Ga0501069_0003042
533 Ga0501070_0007088
534 Ga0501071_0008146
535 Ga0501072_0006768
536 Ga0501073_0003049
537 Ga0501073_0011941
538 Ga0501074_0003376
539 Ga0501074_0010554
540 Ga0501075_0007146
541 Ga0501075_0017566
542 Ga0501076_0002895
543 Ga0501077_0006799
544 Ga0501077_0008115
545 Ga0501079_0007928
546 Ga0501079_0009351
547 Ga0501079_0062999
548 Ga0501080_0004320
549 Ga0501081_0003541
550 Ga0501081_0018305
551 Ga0501083_0002701
552 Ga0501035_0035012
553 Ga0501035_0038326
554 Ga0501044_0031029
555 Ga0501044_0041596
556 Ga0501045_0002085
557 nmdc:mga0yw44_37755_c1
558 nmdc:mga05p37_13214_c1
559 nmdc:mga05p37_69029_c1
560 nmdc:mga09592_80172_c1
561 nmdc:mga0qj67_22386_c1
562 nmdc:mga08y16_13815_c1
563 nmdc:mga0n895_38110_c1
564 nmdc:mga0n895_5732_c1
565 nmdc:mga0a205_3597_c1
566 Ga0500556_0000607
567 Ga0500616_0007971
568 Ga0500616_0019586
569 Ga0501084_0008001
570 Ga0501084_0011210
571 Ga0501082_0042878
572 Ga0466962_0016769
573 Ga0530510_0025968
574 Ga0530510_0038832

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

308

396

0.94

PF17862

AAA_lid_3

AAA+ lid domain

583

625

0.94

PF01434

Peptidase_M41

Peptidase family M41

638

833

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vlf-assembly2.cif.gz_D crystal structure of yeast proteasome interacting protein 0.8937 488 558
4a3v-assembly2.cif.gz_D yeast regulatory particle proteasome assembly chaperone hsm3 in complex with rpt1 c-terminal fragment 0.8887 483 561
1iy2-assembly1.cif.gz_A crystal structure of the ftsh atpase domain from thermus thermophilus 0.8845 185 554
2dzn-assembly2.cif.gz_D crystal structure analysis of yeast nas6p complexed with the proteasome subunit, rpt3 0.8789 492 556
6oa9-assembly1.cif.gz_D cdc48-npl4 complex processing poly-ubiquitinated substrate in the presence of atp 0.8706 196 555
ID Description Score Start End Superfamily
af_A0A0P0V4Q4_512_626_1.20.58.760 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Peptidase M41 0.926 565 666 1.20.58.760
af_P54813_417_488_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9175 484 558 1.10.8.60
4a3vD01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9095 484 557 1.10.8.60
af_Q18787_348_419_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9085 483 557 1.10.8.60
af_A0A1D6HNL9_347_418_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9067 484 558 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A833S2A3-F1-model_v4 AAA+ ATPase domain-containing protein 0.8793 186 539 GO:0005524
GO:0008237
GO:0016887
AF-A0A3N5MAI4-F1-model_v4 Peptidase M41 domain-containing protein 0.86 492 779 GO:0004176
GO:0004222
GO:0005524
GO:0005886
GO:0006508
GO:0030163
AF-A0A0F8H325-F1-model_v4 AAA+ ATPase domain-containing protein 0.8557 184 560 GO:0005524
GO:0016887
AF-A0A7W0S4T8-F1-model_v4 AAA family ATPase 0.8507 92 799 GO:0004176
GO:0004222
GO:0005524
GO:0005886
GO:0006508
GO:0016887
GO:0030163
AF-A0A7S0HSE2-F1-model_v4 AAA+ ATPase domain-containing protein 0.8467 197 560 GO:0005524
GO:0009507
GO:0016887

Map