F388152

General Info

Members Datasets Scaffolds Average Seq Length
287 223 574 298

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0019927|Ga0466969_0019927_1064_2086
Length 340
Sequence MGPVKTSAPFVSTCGFWTIRSMILDNGAVETRRLRLLVELSRLGSMRAVAETVGTTTSTVSQQIAVLAREMGTDLIEPEGRRVRLTPAGRRLAEHGEVILAAVESARLDLAPDAEPNGTLRVAGYATAIRAHLLPLVGELATSHPRLHVLVREHEPAEALDLLAADEADLALTYDYNLAPVTEDPALHATPLWTAPWGLGVPAHDDVPGSADTCAVFARFRTRDWVVNSRNTADETVIRTLASMAGFTPRITHRADSLDLVQDMILAGLGVGLLPMGTPTFPGVRLLPLTGPDVVLRAFAVTRHGRRAWPPLTLVTRLLVQRTAAAASPSSRPDGRGVDG

Samples

Sample ID Description Type Environment
1 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
73 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
80 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
104 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
107 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
108 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
109 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
110 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
111 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
112 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
122 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
123 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
124 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
125 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
126 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
127 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
128 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
138 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
139 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
144 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
147 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
148 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
149 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
152 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
153 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
154 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
155 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
156 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
157 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
161 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
162 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
163 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
164 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
165 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
171 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
172 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
173 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
186 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
191 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
192 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
195 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
196 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
197 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
198 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
199 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
200 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
201 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
202 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
203 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
204 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
205 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
206 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
207 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
208 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
209 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
210 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
211 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
212 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
213 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
214 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
215 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
216 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
217 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
218 2902582711 Micromonospora sp. AP08 Isolate Unclassified
219 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
220 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
221 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
222 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
223 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.52
Metatranscriptomes 0
Isolates 3.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.62
Nodule 0
Rhizoplane 4.18
Rhizosphere 79.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466969_0019927 3300044656 Bacteria 3478
2 rootL2_10325271 3300003322 Bacteria 1451
3 Ga0070683_100241499 3300005329 Bacteria 1718
4 Ga0070670_100198907 3300005331 Bacteria 1741
5 Ga0070682_100006368 3300005337 Bacteria 6626
6 Ga0070682_100024633 3300005337 Bacteria 3583
7 Ga0068868_100039884 3300005338 Bacteria 3651
8 Ga0070692_10007260 3300005345 Bacteria 4872
9 Ga0070668_100572439 3300005347 Bacteria 985
10 Ga0070675_100111513 3300005354 Bacteria 2315
11 Ga0070674_100040149 3300005356 Bacteria 3164
12 Ga0070673_100008610 3300005364 Bacteria 6794
13 Ga0070659_100156106 3300005366 Bacteria 1864
14 Ga0070714_100001076 3300005435 Bacteria 19530
15 Ga0070714_100069787 3300005435 Bacteria 3036
16 Ga0070713_100010502 3300005436 Bacteria 6690
17 Ga0070711_100168886 3300005439 Bacteria 1665
18 Ga0070685_10115092 3300005466 Bacteria 1663
19 Ga0070679_100081047 3300005530 Bacteria 3235
20 Ga0070684_100127406 3300005535 Bacteria 2294
21 Ga0070684_100277905 3300005535 Bacteria 1534
22 Ga0070672_100003797 3300005543 Bacteria 9828
23 Ga0070686_100092402 3300005544 Bacteria 2026
24 Ga0070665_100282885 3300005548 Bacteria 1661
25 Ga0070702_100030319 3300005615 Bacteria 2948
26 Ga0070702_100064363 3300005615 Bacteria 2145
27 Ga0068852_100001902 3300005616 Bacteria 14205
28 Ga0068866_10016449 3300005718 Bacteria 3308
29 Ga0068861_100046060 3300005719 Bacteria 3287
30 Ga0068870_10014911 3300005840 Bacteria 3679
31 Ga0081538_10002852 3300005981 Bacteria 16527
32 Ga0081539_10002295 3300005985 Bacteria 27678
33 Ga0075365_10017011 3300006038 Bacteria 4440
34 Ga0075365_10074294 3300006038 Bacteria 2292
35 Ga0075364_10141883 3300006051 Bacteria 1616
36 Ga0070716_100017134 3300006173 Bacteria 3751
37 Ga0068865_100041986 3300006881 Bacteria 3116
38 Ga0075435_100108727 3300007076 Bacteria 2304
39 Ga0111539_10055482 3300009094 Bacteria 4710
40 Ga0105245_10130108 3300009098 Bacteria 2360
41 Ga0105245_10234232 3300009098 Bacteria 1777
42 Ga0114129_10692875 3300009147 Bacteria 1310
43 Ga0105243_10008255 3300009148 Bacteria 7999
44 Ga0105243_10271517 3300009148 Bacteria 1523
45 Ga0105249_10054812 3300009553 Bacteria 3646
46 Ga0105246_10104674 3300011119 Bacteria 2067
47 Ga0105246_10364641 3300011119 Bacteria 1188
48 Ga0157372_10581260 3300013307 Bacteria 1306
49 Ga0157375_10040760 3300013308 Bacteria 4480
50 Ga0157375_10228097 3300013308 Bacteria 2021
51 Ga0157375_10322841 3300013308 Bacteria 1708
52 Ga0157375_10646546 3300013308 Bacteria 1214
53 Ga0163163_10021579 3300014325 Bacteria 6080
54 Ga0157380_10220119 3300014326 Bacteria 1698
55 Ga0182008_10116036 3300014497 Bacteria 1328
56 Ga0157377_10006474 3300014745 Bacteria 5590
57 Ga0157377_10225278 3300014745 Bacteria 1202
58 Ga0163161_10012615 3300017792 Bacteria 5872
59 Ga0207688_10046096 3300025901 Bacteria 2433
60 Ga0207688_10076413 3300025901 Bacteria 1907
61 Ga0207688_10130035 3300025901 Bacteria 1475
62 Ga0207643_10001516 3300025908 Bacteria 13265
63 Ga0207643_10111113 3300025908 Bacteria 1615
64 Ga0207662_10048950 3300025918 Bacteria 2506
65 Ga0207652_10113985 3300025921 Bacteria 2400
66 Ga0207659_10085024 3300025926 Bacteria 2349
67 Ga0207687_10045321 3300025927 Bacteria 3039
68 Ga0207700_10035524 3300025928 Bacteria 3591
69 Ga0207700_10036313 3300025928 Bacteria 3557
70 Ga0207700_10141719 3300025928 Bacteria 1976
71 Ga0207664_10013070 3300025929 Bacteria 5950
72 Ga0207664_10068492 3300025929 Bacteria 2851
73 Ga0207690_10035925 3300025932 Bacteria 3205
74 Ga0207669_10297674 3300025937 Bacteria 1225
75 Ga0207704_10005731 3300025938 Bacteria 5741
76 Ga0207704_10323616 3300025938 Bacteria 1190
77 Ga0207691_10026781 3300025940 Bacteria 5410
78 Ga0207651_10075444 3300025960 Bacteria 2406
79 Ga0207668_10002457 3300025972 Bacteria 10817
80 Ga0207640_10008609 3300025981 Bacteria 5670
81 Ga0207677_10091721 3300026023 Bacteria 2210
82 Ga0207677_10095516 3300026023 Bacteria 2173
83 Ga0207678_10113284 3300026067 Bacteria 2314
84 Ga0207678_10174441 3300026067 Bacteria 1836
85 Ga0207708_10002864 3300026075 Bacteria 12703
86 Ga0207708_10549442 3300026075 Bacteria 974
87 Ga0207648_10003390 3300026089 Bacteria 16733
88 Ga0207675_100028886 3300026118 Bacteria 5166
89 Ga0207683_10040737 3300026121 Bacteria 4055
90 Ga0207683_10047326 3300026121 Bacteria 3766
91 Ga0207683_10309762 3300026121 Bacteria 1445
92 Ga0207683_10564142 3300026121 Bacteria 1053
93 Ga0265337_1001999 3300028556 Bacteria 9681
94 Ga0265326_10003113 3300028558 Bacteria 5497
95 Ga0265319_1001264 3300028563 Bacteria 15378
96 Ga0265334_10005614 3300028573 Bacteria 5480
97 Ga0265318_10020508 3300028577 Bacteria 2666
98 Ga0265323_10003166 3300028653 Bacteria 7329
99 Ga0265336_10020293 3300028666 Bacteria 2134
100 Ga0307517_10005656 3300028786 Bacteria 18747
101 Ga0307517_10099028 3300028786 Bacteria 2315
102 Ga0307515_10000453 3300028794 Bacteria 97971
103 Ga0307515_10014931 3300028794 Bacteria 14353
104 Ga0307515_10031871 3300028794 Bacteria 8757
105 Ga0307515_10060606 3300028794 Bacteria 5392
106 Ga0265338_10003263 3300028800 Bacteria 23059
107 Ga0265324_10004768 3300029957 Bacteria 6004
108 Ga0307512_10003331 3300030522 Bacteria 18848
109 Ga0265332_10010918 3300031238 Bacteria 4035
110 Ga0265320_10008233 3300031240 Bacteria 6397
111 Ga0265325_10006662 3300031241 Bacteria 6988
112 Ga0265340_10007497 3300031247 Bacteria 5922
113 Ga0265316_10039413 3300031344 Bacteria 3794
114 Ga0307513_10016595 3300031456 Bacteria 8875
115 Ga0307509_10249898 3300031507 Bacteria 1558
116 Ga0307408_100190914 3300031548 Bacteria 1650
117 Ga0307508_10004053 3300031616 Bacteria 14495
118 Ga0307508_10014392 3300031616 Bacteria 7216
119 Ga0307508_10175370 3300031616 Bacteria 1747
120 Ga0307514_10234446 3300031649 Bacteria 1108
121 Ga0265342_10007517 3300031712 Bacteria 7968
122 Ga0307516_10000479 3300031730 Bacteria 53051
123 Ga0307516_10036644 3300031730 Bacteria 4908
124 Ga0307516_10075809 3300031730 Bacteria 3217
125 Ga0307405_10085245 3300031731 Bacteria 2076
126 Ga0307410_10022809 3300031852 Bacteria 3877
127 Ga0326468_10004135 3300031889 Bacteria 1257
128 Ga0307406_10059182 3300031901 Bacteria 2465
129 Ga0307406_10170772 3300031901 Bacteria 1573
130 Ga0307412_10490958 3300031911 Bacteria 1020
131 Ga0307409_100009037 3300031995 Bacteria 6095
132 Ga0307409_100102702 3300031995 Bacteria 2376
133 Ga0307409_100122363 3300031995 Bacteria 2206
134 Ga0307416_100059627 3300032002 Bacteria 3102
135 Ga0307416_100223434 3300032002 Bacteria 1808
136 Ga0307416_100568137 3300032002 Bacteria 1210
137 Ga0307414_10032494 3300032004 Bacteria 3437
138 Ga0307411_10120160 3300032005 Bacteria 1899
139 Ga0307411_10126185 3300032005 Bacteria 1862
140 Ga0307415_100011359 3300032126 Bacteria 5092
141 Ga0307415_100043547 3300032126 Bacteria 2995
142 Ga0307510_10188524 3300033180 Bacteria 1614
143 Ga0373934_0025177 3300035086 Bacteria 2303
144 Ga0373923_0009038 3300035111 Bacteria 3580
145 Ga0373936_0000108 3300035113 Bacteria 29723
146 Ga0373945_0001295 3300035116 Bacteria 7585
147 Ga0373953_0051346 3300035117 Bacteria 1667
148 Ga0373954_0067894 3300035118 Bacteria 1690
149 Ga0373956_0004928 3300035119 Bacteria 5348
150 Ga0373955_0014759 3300035172 Bacteria 3810
151 Ga0373942_0000097 3300035207 Bacteria 19569
152 Ga0373962_0029807 3300035242 Bacteria 1489
153 Ga0373935_0001352 3300035692 Bacteria 13569
154 Ga0373935_0079982 3300035692 Bacteria 2122
155 Ga0373927_0011591 3300035695 Bacteria 5871
156 Ga0373933_0023387 3300035724 Bacteria 3529
157 Ga0373947_0230704 3300035725 Bacteria 1219
158 Ga0373925_0000515 3300037068 Bacteria 38779
159 Ga0373925_0002819 3300037068 Bacteria 13703
160 Ga0395905_0482292 3300037471 Bacteria 1139
161 Ga0436364_0110791 3300037853 Bacteria 1540
162 Ga0436364_0783049 3300037853 Bacteria 3897
163 Ga0436364_0928804 3300037853 Bacteria 2315
164 Ga0436365_0619243 3300039437 Bacteria 2356
165 Ga0451789_0322377 3300041443 Bacteria 5018
166 Ga0451791_0720764 3300041451 Bacteria 4434
167 Ga0451793_0141256 3300041452 Bacteria 9769
168 Ga0451795_1585942 3300041456 Bacteria 1871
169 Ga0451833_1038318 3300041491 Bacteria 1318
170 Ga0451843_0223086 3300041509 Bacteria 3252
171 Ga0451853_2278787 3300041512 Bacteria 2882
172 Ga0466965_0029193 3300044683 Bacteria 2683
173 Ga0466961_0030706 3300044693 Bacteria 3452
174 Ga0466963_0150292 3300044694 Bacteria 1617
175 Ga0466970_0057518 3300044765 Bacteria 2079
176 Ga0466957_0091758 3300044842 Bacteria 1904
177 Ga0466960_0005069 3300044901 Bacteria 5205
178 Ga0466960_0123475 3300044901 Bacteria 1358
179 Ga0466967_0038737 3300045976 Bacteria 4091
180 Ga0466967_0158960 3300045976 Bacteria 2120
181 Ga0466967_0264161 3300045976 Bacteria 1647
182 Ga0495653_0081648 3300046463 Bacteria 2388
183 Ga0495650_0023553 3300046471 Bacteria 2929
184 Ga0495605_0101998 3300046474 Bacteria 1318
185 Ga0495662_0027390 3300046476 Bacteria 2754
186 Ga0495594_0084486 3300046499 Bacteria 1775
187 Ga0495608_0106455 3300046511 Bacteria 1805
188 Ga0495618_0019178 3300046514 Bacteria 4206
189 Ga0495628_0111280 3300046516 Bacteria 2106
190 Ga0495630_0014525 3300046517 Bacteria 5739
191 Ga0495643_0010362 3300046522 Bacteria 5740
192 Ga0495652_0049471 3300046529 Bacteria 3598
193 Ga0495665_0020445 3300046531 Bacteria 3556
194 Ga0495587_0066475 3300046536 Bacteria 2103
195 Ga0495667_0014669 3300046559 Bacteria 5294
196 Ga0495667_0014793 3300046559 Bacteria 5273
197 Ga0495634_0005484 3300046642 Bacteria 9754
198 Ga0495634_0140096 3300046642 Bacteria 1536
199 Ga0495635_0000206 3300046663 Bacteria 37472
200 Ga0495635_0011928 3300046663 Bacteria 6088
201 Ga0495657_0048498 3300046675 Bacteria 2864
202 Ga0495599_0039351 3300046678 Bacteria 2971
203 Ga0495623_0031141 3300046679 Bacteria 3431
204 Ga0495623_0106868 3300046679 Bacteria 1700
205 Ga0495658_0100168 3300046683 Bacteria 1729
206 Ga0495658_0253229 3300046683 Bacteria 1108
207 Ga0495624_0028340 3300046690 Bacteria 3661
208 Ga0495660_0076301 3300046810 Bacteria 1766
209 Ga0495581_0014959 3300047315 Bacteria 4501
210 Ga0495604_0000789 3300047317 Bacteria 26718
211 Ga0495674_0028090 3300047319 Bacteria 5135
212 Ga0495676_0004805 3300047321 Bacteria 12381
213 Ga0495680_0014156 3300047322 Bacteria 6926
214 Ga0495680_0016712 3300047322 Bacteria 6294
215 Ga0495687_009206 3300047443 Bacteria 5554
216 Ga0495675_0014609 3300047444 Bacteria 4961
217 Ga0495685_018100 3300047447 Bacteria 2415
218 Ga0495681_0006090 3300047470 Bacteria 7971
219 Ga0495684_0012898 3300047471 Bacteria 6452
220 Ga0495593_0011780 3300047673 Bacteria 5015
221 Ga0495602_0079402 3300048088 Bacteria 2768
222 Ga0495602_0344991 3300048088 Bacteria 1076
223 Ga0496108_0000068 3300048911 Bacteria 115391
224 Ga0496108_0127115 3300048911 Bacteria 2189
225 Ga0496108_0349067 3300048911 Bacteria 1291
226 Ga0496109_0065339 3300048912 Bacteria 3330
227 Ga0496109_0600019 3300048912 Bacteria 1037
228 Ga0496111_0308426 3300048914 Bacteria 1173
229 Ga0496115_0236928 3300048918 Bacteria 1504
230 Ga0501031_0030412 3300049568 Bacteria 3522
231 Ga0501031_0285452 3300049568 Bacteria 1070
232 Ga0501032_0037234 3300049569 Bacteria 3318
233 Ga0501033_0380321 3300049570 Bacteria 986
234 Ga0501034_0471691 3300049571 Bacteria 1171
235 Ga0501037_0262707 3300049573 Bacteria 1206
236 Ga0501039_0096222 3300049575 Bacteria 2309
237 Ga0501040_0052143 3300049576 Bacteria 2799
238 Ga0501041_0119085 3300049577 Bacteria 1640
239 Ga0501046_0176120 3300049580 Bacteria 1602
240 Ga0501048_0106945 3300049582 Bacteria 1975
241 Ga0501048_0152705 3300049582 Bacteria 1633
242 Ga0501067_0015303 3300049583 Bacteria 4245
243 Ga0501067_0081490 3300049583 Bacteria 1794
244 Ga0501067_0177100 3300049583 Bacteria 1188
245 Ga0501068_0040832 3300049584 Bacteria 2787
246 Ga0501068_0083181 3300049584 Bacteria 1967
247 Ga0501070_0268150 3300049586 Bacteria 1395
248 Ga0501071_0092009 3300049587 Bacteria 2228
249 Ga0501074_0056420 3300049590 Bacteria 2831
250 Ga0501075_0074301 3300049591 Bacteria 2571
251 Ga0501076_0054352 3300049592 Bacteria 3173
252 Ga0501076_0080907 3300049592 Bacteria 2608
253 Ga0501077_0029148 3300049593 Bacteria 3509
254 Ga0501079_0032519 3300049741 Bacteria 4011
255 Ga0501081_0244564 3300049743 Bacteria 1309
256 Ga0501045_0301508 3300049824 Bacteria 1192
257 nmdc:mga00v17_137820_c1 3300050491 Bacteria 1563
258 nmdc:mga0yw44_78926_c1 3300050492 Bacteria 2059
259 nmdc:mga06z11_304430_c1 3300050494 Bacteria 948
260 nmdc:mga07m45_160388_c1 3300050496 Bacteria 1305
261 nmdc:mga05p37_561140_c1 3300050507 Bacteria 1297
262 nmdc:mga08y16_390800_c1 3300050511 Bacteria 1425
263 nmdc:mga0rr50_202246_c1 3300050513 Bacteria 1632
264 Ga0495655_0019256 3300053083 Bacteria 1513
265 Ga0500578_0012937 3300053086 Bacteria 5381
266 Ga0500644_0017063 3300053088 Bacteria 2101
267 Ga0500566_0032563 3300053094 Bacteria 3041
268 Ga0500560_005759 3300053107 Bacteria 2772
269 Ga0500569_000726 3300053109 Bacteria 5728
270 Ga0500652_026491 3300053131 Bacteria 2233
271 Ga0500561_0001070 3300053137 Bacteria 4406
272 Ga0500600_0031376 3300053149 Bacteria 3123
273 Ga0500600_0035486 3300053149 Bacteria 2905
274 Ga0500616_0002546 3300053153 Bacteria 15030
275 Ga0500633_0000607 3300053160 Bacteria 5914
276 Ga0500634_0009501 3300053161 Bacteria 4926
277 Ga0530510_0463458 3300061734 Bacteria 959
278 2554259731 2554235005 Bacteria 6457341
279 2623586254 2622736626 Bacteria 7181580
280 2744958154 2744054611 Bacteria 5611514
281 2793975521 2791355406 Bacteria 11364898
282 2902587391 2902582711 Bacteria 6187705
283 2915365160 2915358134 Bacteria 6050864
284 8047902472 8047893842 Bacteria 11723082
285 8048370268 8048369669 Bacteria 11666822
286 8048389153 8048379754 Bacteria 11877923
287 8054163970 8054160619 Bacteria 7783213
288 Ga0466969_0019927
289 rootL2_10325271
290 Ga0070683_100241499
291 Ga0070670_100198907
292 Ga0070682_100006368
293 Ga0070682_100024633
294 Ga0068868_100039884
295 Ga0070692_10007260
296 Ga0070668_100572439
297 Ga0070675_100111513
298 Ga0070674_100040149
299 Ga0070673_100008610
300 Ga0070659_100156106
301 Ga0070714_100001076
302 Ga0070714_100069787
303 Ga0070713_100010502
304 Ga0070711_100168886
305 Ga0070685_10115092
306 Ga0070679_100081047
307 Ga0070684_100127406
308 Ga0070684_100277905
309 Ga0070672_100003797
310 Ga0070686_100092402
311 Ga0070665_100282885
312 Ga0070702_100030319
313 Ga0070702_100064363
314 Ga0068852_100001902
315 Ga0068866_10016449
316 Ga0068861_100046060
317 Ga0068870_10014911
318 Ga0081538_10002852
319 Ga0081539_10002295
320 Ga0075365_10017011
321 Ga0075365_10074294
322 Ga0075364_10141883
323 Ga0070716_100017134
324 Ga0068865_100041986
325 Ga0075435_100108727
326 Ga0111539_10055482
327 Ga0105245_10130108
328 Ga0105245_10234232
329 Ga0114129_10692875
330 Ga0105243_10008255
331 Ga0105243_10271517
332 Ga0105249_10054812
333 Ga0105246_10104674
334 Ga0105246_10364641
335 Ga0157372_10581260
336 Ga0157375_10040760
337 Ga0157375_10228097
338 Ga0157375_10322841
339 Ga0157375_10646546
340 Ga0163163_10021579
341 Ga0157380_10220119
342 Ga0182008_10116036
343 Ga0157377_10006474
344 Ga0157377_10225278
345 Ga0163161_10012615
346 Ga0207688_10046096
347 Ga0207688_10076413
348 Ga0207688_10130035
349 Ga0207643_10001516
350 Ga0207643_10111113
351 Ga0207662_10048950
352 Ga0207652_10113985
353 Ga0207659_10085024
354 Ga0207687_10045321
355 Ga0207700_10035524
356 Ga0207700_10036313
357 Ga0207700_10141719
358 Ga0207664_10013070
359 Ga0207664_10068492
360 Ga0207690_10035925
361 Ga0207669_10297674
362 Ga0207704_10005731
363 Ga0207704_10323616
364 Ga0207691_10026781
365 Ga0207651_10075444
366 Ga0207668_10002457
367 Ga0207640_10008609
368 Ga0207677_10091721
369 Ga0207677_10095516
370 Ga0207678_10113284
371 Ga0207678_10174441
372 Ga0207708_10002864
373 Ga0207708_10549442
374 Ga0207648_10003390
375 Ga0207675_100028886
376 Ga0207683_10040737
377 Ga0207683_10047326
378 Ga0207683_10309762
379 Ga0207683_10564142
380 Ga0265337_1001999
381 Ga0265326_10003113
382 Ga0265319_1001264
383 Ga0265334_10005614
384 Ga0265318_10020508
385 Ga0265323_10003166
386 Ga0265336_10020293
387 Ga0307517_10005656
388 Ga0307517_10099028
389 Ga0307515_10000453
390 Ga0307515_10014931
391 Ga0307515_10031871
392 Ga0307515_10060606
393 Ga0265338_10003263
394 Ga0265324_10004768
395 Ga0307512_10003331
396 Ga0265332_10010918
397 Ga0265320_10008233
398 Ga0265325_10006662
399 Ga0265340_10007497
400 Ga0265316_10039413
401 Ga0307513_10016595
402 Ga0307509_10249898
403 Ga0307408_100190914
404 Ga0307508_10004053
405 Ga0307508_10014392
406 Ga0307508_10175370
407 Ga0307514_10234446
408 Ga0265342_10007517
409 Ga0307516_10000479
410 Ga0307516_10036644
411 Ga0307516_10075809
412 Ga0307405_10085245
413 Ga0307410_10022809
414 Ga0326468_10004135
415 Ga0307406_10059182
416 Ga0307406_10170772
417 Ga0307412_10490958
418 Ga0307409_100009037
419 Ga0307409_100102702
420 Ga0307409_100122363
421 Ga0307416_100059627
422 Ga0307416_100223434
423 Ga0307416_100568137
424 Ga0307414_10032494
425 Ga0307411_10120160
426 Ga0307411_10126185
427 Ga0307415_100011359
428 Ga0307415_100043547
429 Ga0307510_10188524
430 Ga0373934_0025177
431 Ga0373923_0009038
432 Ga0373936_0000108
433 Ga0373945_0001295
434 Ga0373953_0051346
435 Ga0373954_0067894
436 Ga0373956_0004928
437 Ga0373955_0014759
438 Ga0373942_0000097
439 Ga0373962_0029807
440 Ga0373935_0001352
441 Ga0373935_0079982
442 Ga0373927_0011591
443 Ga0373933_0023387
444 Ga0373947_0230704
445 Ga0373925_0000515
446 Ga0373925_0002819
447 Ga0395905_0482292
448 Ga0436364_0110791
449 Ga0436364_0783049
450 Ga0436364_0928804
451 Ga0436365_0619243
452 Ga0451789_0322377
453 Ga0451791_0720764
454 Ga0451793_0141256
455 Ga0451795_1585942
456 Ga0451833_1038318
457 Ga0451843_0223086
458 Ga0451853_2278787
459 Ga0466965_0029193
460 Ga0466961_0030706
461 Ga0466963_0150292
462 Ga0466970_0057518
463 Ga0466957_0091758
464 Ga0466960_0005069
465 Ga0466960_0123475
466 Ga0466967_0038737
467 Ga0466967_0158960
468 Ga0466967_0264161
469 Ga0495653_0081648
470 Ga0495650_0023553
471 Ga0495605_0101998
472 Ga0495662_0027390
473 Ga0495594_0084486
474 Ga0495608_0106455
475 Ga0495618_0019178
476 Ga0495628_0111280
477 Ga0495630_0014525
478 Ga0495643_0010362
479 Ga0495652_0049471
480 Ga0495665_0020445
481 Ga0495587_0066475
482 Ga0495667_0014669
483 Ga0495667_0014793
484 Ga0495634_0005484
485 Ga0495634_0140096
486 Ga0495635_0000206
487 Ga0495635_0011928
488 Ga0495657_0048498
489 Ga0495599_0039351
490 Ga0495623_0031141
491 Ga0495623_0106868
492 Ga0495658_0100168
493 Ga0495658_0253229
494 Ga0495624_0028340
495 Ga0495660_0076301
496 Ga0495581_0014959
497 Ga0495604_0000789
498 Ga0495674_0028090
499 Ga0495676_0004805
500 Ga0495680_0014156
501 Ga0495680_0016712
502 Ga0495687_009206
503 Ga0495675_0014609
504 Ga0495685_018100
505 Ga0495681_0006090
506 Ga0495684_0012898
507 Ga0495593_0011780
508 Ga0495602_0079402
509 Ga0495602_0344991
510 Ga0496108_0000068
511 Ga0496108_0127115
512 Ga0496108_0349067
513 Ga0496109_0065339
514 Ga0496109_0600019
515 Ga0496111_0308426
516 Ga0496115_0236928
517 Ga0501031_0030412
518 Ga0501031_0285452
519 Ga0501032_0037234
520 Ga0501033_0380321
521 Ga0501034_0471691
522 Ga0501037_0262707
523 Ga0501039_0096222
524 Ga0501040_0052143
525 Ga0501041_0119085
526 Ga0501046_0176120
527 Ga0501048_0106945
528 Ga0501048_0152705
529 Ga0501067_0015303
530 Ga0501067_0081490
531 Ga0501067_0177100
532 Ga0501068_0040832
533 Ga0501068_0083181
534 Ga0501070_0268150
535 Ga0501071_0092009
536 Ga0501074_0056420
537 Ga0501075_0074301
538 Ga0501076_0054352
539 Ga0501076_0080907
540 Ga0501077_0029148
541 Ga0501079_0032519
542 Ga0501081_0244564
543 Ga0501045_0301508
544 nmdc:mga00v17_137820_c1
545 nmdc:mga0yw44_78926_c1
546 nmdc:mga06z11_304430_c1
547 nmdc:mga07m45_160388_c1
548 nmdc:mga05p37_561140_c1
549 nmdc:mga08y16_390800_c1
550 nmdc:mga0rr50_202246_c1
551 Ga0495655_0019256
552 Ga0500578_0012937
553 Ga0500644_0017063
554 Ga0500566_0032563
555 Ga0500560_005759
556 Ga0500569_000726
557 Ga0500652_026491
558 Ga0500561_0001070
559 Ga0500600_0031376
560 Ga0500600_0035486
561 Ga0500616_0002546
562 Ga0500633_0000607
563 Ga0500634_0009501
564 Ga0530510_0463458
565 2554259731
566 2623586254
567 2744958154
568 2793975521
569 2902587391
570 2915365160
571 8047902472
572 8048370268
573 8048389153
574 8054163970

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

31

90

0.98

PF03466

LysR_substrate

LysR substrate binding domain

113

324

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xxp-assembly1.cif.gz_B crystal structure of cbnr_dbd-dna complex 0.9431 1 78
5z4y-assembly1.cif.gz_B crystal structure of pacysb ntd domain with space group p4 0.9116 1 79
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9103 1 78
4ihs-assembly1.cif.gz_B crystal structure of benm_dbd/catb site 1 dna complex 0.909 1 78
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.909 1 78
ID Description Score Start End Superfamily
af_Q2G0U3_1_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9574 1 78 1.10.10.10
af_Q47141_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9536 1 80 1.10.10.10
af_P36771_5_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9535 1 78 1.10.10.10
af_P77309_1_86_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9501 1 79 1.10.10.10
af_Q2FZS7_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9483 1 78 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A833KNX1-F1-model_v4 deleted 0.9196 2 73
AF-A0A367M5X4-F1-model_v4 LysR family transcriptional regulator 0.8924 1 87 GO:0000976
GO:0003700
AF-A0A4R5EGG8-F1-model_v4 LysR family transcriptional regulator 0.8803 2 85 GO:0003677
GO:0003700
GO:0032993
AF-A0A367M5X4-F1-model_v4 LysR family transcriptional regulator 0.8739 1 87 GO:0000976
GO:0003700
AF-A0A2N5XFP0-F1-model_v4 LysR family transcriptional regulator 0.8392 89 286 GO:0003677
GO:0003700
GO:0032993

Map