F388129

General Info

Members Datasets Scaffolds Average Seq Length
287 200 572 398

Family's Representative Sequence

Representative Sequence 3300041405|Ga0439438_000321|Ga0439438_000321_12208_13587
Length 459
Sequence LRSLDAPVCHSGWGRFAFEKTWLAKLNALLSHLGTGKKPFQSGMLYCNFRVPPFTKDAAYMDNAVATMPPAGTLSSPNATTQVRTRMLAIDALRGLIMLYMLVDHVRETFFLHVQVGDPMDPVNTPPELFLTRISSMVCAPVFVFLTGLSAWLYGQSHNRREVSTFLLKRGAFLVFLELTLVNFAWNATFVPPTLWLQIIWAIGLSMIILAALIHMPRAALAVLGCVIVAGHNLLDGIVLTADSPFFEIWSILHQRSFIEITEYTRARTTYPILPWIGLIALGYCAGPWFSRDADPAQRARRLVTWGLGLLVGFVLIRYLNVYGEKPWTTLENGVRTFMSFMSLTKYPPSLMFLMPTVGVGLLLLAWFQRLEGRPVLEVLSSYGGAPMFFYVMHLLVLKALYLIAVQIWGLNQGKYYGFDSLSGIWLWAAMLGAAFYLPTRWFAQLKQRRRDIAWLKYF

Samples

Sample ID Description Type Environment
1 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
65 3300009982 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_189 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
115 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
116 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
117 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
118 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
130 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
131 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
132 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
141 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
147 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
148 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
162 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
163 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
164 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
165 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
166 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
167 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
168 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
169 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
178 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
179 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
180 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
181 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
182 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
185 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
186 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
187 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
188 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
189 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
190 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
191 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
192 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
193 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
194 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
195 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
196 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
197 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
198 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
199 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
200 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 94.43
Metatranscriptomes 0
Isolates 5.57

Biome Distribution

Category Percentage (%)
Aerial Root 0.7
Bulb 0
Endosphere 7.67
Nodule 0
Rhizoplane 2.44
Rhizosphere 82.23
Stem 0
Stem Tuber 0
Unclassified 1.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439438_000321 3300041405 Bacteria 21641
2 SwRhRL2b_contig_1562608 2162886007 Bacteria 8233
3 SwRhRL2b_contig_3328644 2162886007 Bacteria 2597
4 SwRhRL2b_contig_522126 2162886007 Bacteria 4895
5 MBSR1b_contig_2179444 2162886012 Bacteria 2607
6 Ga0065704_10001714 3300005289 Bacteria 13211
7 Ga0065704_10074760 3300005289 Bacteria 6036
8 Ga0065715_10138009 3300005293 Bacteria 1898
9 Ga0070658_10071531 3300005327 Bacteria 2841
10 Ga0070658_10323034 3300005327 Bacteria 1318
11 Ga0070676_10016196 3300005328 Bacteria 4120
12 Ga0070690_100004253 3300005330 Bacteria 7930
13 Ga0070670_100007153 3300005331 Bacteria 9453
14 Ga0070670_100014525 3300005331 Bacteria 6762
15 Ga0070670_100087481 3300005331 Bacteria 2678
16 Ga0068869_100001235 3300005334 Bacteria 15080
17 Ga0070666_10090666 3300005335 Bacteria 2099
18 Ga0070682_100051874 3300005337 Bacteria 2565
19 Ga0070689_100005700 3300005340 Bacteria 8535
20 Ga0070661_100003450 3300005344 Bacteria 10916
21 Ga0070692_10035735 3300005345 Bacteria 2517
22 Ga0070668_100016227 3300005347 Bacteria 5571
23 Ga0070668_100024277 3300005347 Bacteria 4592
24 Ga0070669_100000052 3300005353 Bacteria 114467
25 Ga0070675_100000591 3300005354 Bacteria 24843
26 Ga0070671_100008061 3300005355 Bacteria 8431
27 Ga0070671_100052663 3300005355 Bacteria 3384
28 Ga0070673_100000639 3300005364 Bacteria 19231
29 Ga0070673_100031109 3300005364 Bacteria 4002
30 Ga0070688_100003743 3300005365 Bacteria 7873
31 Ga0070659_100071585 3300005366 Bacteria 2757
32 Ga0070659_100170758 3300005366 Bacteria 1781
33 Ga0070667_100046038 3300005367 Bacteria 3669
34 Ga0070714_100158412 3300005435 Unclassified 2046
35 Ga0070713_100034127 3300005436 Bacteria 4083
36 Ga0070701_10011544 3300005438 Bacteria 3954
37 Ga0070700_100014454 3300005441 Bacteria 4457
38 Ga0070678_100188492 3300005456 Bacteria 1694
39 Ga0070662_100001082 3300005457 Bacteria 16613
40 Ga0070662_100002616 3300005457 Bacteria 11104
41 Ga0070662_100014076 3300005457 Bacteria 5335
42 Ga0068867_100019389 3300005459 Bacteria 4848
43 Ga0070685_10013730 3300005466 Bacteria 4279
44 Ga0070672_100022513 3300005543 Bacteria 4630
45 Ga0070686_100001134 3300005544 Bacteria 15311
46 Ga0070665_100003088 3300005548 Bacteria 17930
47 Ga0070665_100003721 3300005548 Bacteria 16149
48 Ga0070665_100012654 3300005548 Bacteria 8498
49 Ga0070664_100000407 3300005564 Bacteria 32028
50 Ga0068857_100024251 3300005577 Bacteria 5339
51 Ga0068857_100034658 3300005577 Bacteria 4465
52 Ga0068852_100071713 3300005616 Bacteria 3042
53 Ga0068859_100002908 3300005617 Bacteria 17396
54 Ga0068864_100017127 3300005618 Bacteria 6043
55 Ga0068861_100001806 3300005719 Bacteria 13779
56 Ga0068861_100006940 3300005719 Bacteria 7736
57 Ga0068870_10012194 3300005840 Bacteria 4009
58 Ga0068863_100000673 3300005841 Bacteria 34509
59 Ga0068863_100000752 3300005841 Bacteria 32413
60 Ga0068863_100062324 3300005841 Bacteria 3527
61 Ga0068858_100007573 3300005842 Bacteria 10489
62 Ga0068860_100000719 3300005843 Bacteria 37763
63 Ga0068860_100016946 3300005843 Bacteria 7101
64 Ga0068862_100000044 3300005844 Bacteria 156665
65 Ga0068862_100000717 3300005844 Bacteria 33735
66 Ga0068862_100002969 3300005844 Bacteria 14815
67 Ga0081540_1014652 3300005983 Bacteria 5010
68 Ga0070717_10024211 3300006028 Bacteria 4818
69 Ga0075366_10085948 3300006195 Bacteria 1882
70 Ga0075370_10002567 3300006353 Bacteria 8456
71 Ga0075370_10062969 3300006353 Bacteria 2114
72 Ga0075428_100000169 3300006844 Bacteria 60729
73 Ga0075428_100080482 3300006844 Bacteria 3555
74 Ga0075428_100137007 3300006844 Bacteria 2661
75 Ga0075430_100001922 3300006846 Bacteria 17042
76 Ga0075431_100004977 3300006847 Bacteria 13075
77 Ga0075431_100124371 3300006847 Bacteria 2661
78 Ga0075429_100000416 3300006880 Bacteria 31687
79 Ga0075429_100021711 3300006880 Bacteria 5565
80 Ga0075429_100091758 3300006880 Bacteria 2649
81 Ga0097620_100002908 3300006931 Bacteria 17396
82 Ga0097620_100090705 3300006931 Bacteria 3107
83 Ga0111539_10000211 3300009094 Bacteria 69441
84 Ga0111539_10057748 3300009094 Bacteria 4607
85 Ga0111539_10256269 3300009094 Bacteria 2037
86 Ga0105247_10001669 3300009101 Bacteria 15666
87 Ga0114129_10001827 3300009147 Bacteria 28986
88 Ga0114129_10005882 3300009147 Bacteria 17371
89 Ga0105243_10199893 3300009148 Bacteria 1752
90 Ga0105241_10285717 3300009174 Bacteria 1411
91 Ga0105248_10000481 3300009177 Bacteria 45536
92 Ga0105248_10010788 3300009177 Bacteria 10088
93 Ga0105248_10016758 3300009177 Bacteria 8069
94 Ga0105237_10342640 3300009545 Bacteria 1499
95 Ga0105238_10003752 3300009551 Bacteria 15094
96 Ga0105249_10000045 3300009553 Bacteria 182927
97 Ga0105249_10020305 3300009553 Bacteria 5939
98 Ga0105249_10040327 3300009553 Bacteria 4240
99 Ga0105249_10051581 3300009553 Bacteria 3753
100 Ga0105148_100109 3300009978 Bacteria 12939
101 Ga0105147_100659 3300009982 Bacteria 2769
102 Ga0105246_10000004 3300011119 Bacteria 86087
103 Ga0157373_10060100 3300013100 Unclassified 2693
104 Ga0157375_10008494 3300013308 Bacteria 8993
105 Ga0163163_10000701 3300014325 Bacteria 28457
106 Ga0157380_10014944 3300014326 Bacteria 5692
107 Ga0163161_10006435 3300017792 Bacteria 8130
108 Ga0163161_10016603 3300017792 Bacteria 5143
109 Ga0163161_10040900 3300017792 Bacteria 3330
110 Ga0163161_10069231 3300017792 Bacteria 2579
111 Ga0209147_100270 3300025229 Bacteria 46982
112 Ga0209257_1000431 3300025304 Bacteria 80748
113 Ga0207710_10001776 3300025900 Bacteria 10419
114 Ga0207688_10032141 3300025901 Bacteria 2899
115 Ga0207680_10073800 3300025903 Bacteria 2122
116 Ga0207645_10008684 3300025907 Bacteria 7075
117 Ga0207643_10150697 3300025908 Bacteria 1394
118 Ga0207705_10069126 3300025909 Bacteria 2558
119 Ga0207662_10006075 3300025918 Bacteria 6497
120 Ga0207649_10068093 3300025920 Bacteria 2262
121 Ga0207694_10010462 3300025924 Bacteria 6997
122 Ga0207650_10073423 3300025925 Bacteria 2576
123 Ga0207650_10212868 3300025925 Bacteria 1552
124 Ga0207659_10002166 3300025926 Bacteria 11666
125 Ga0207700_10030368 3300025928 Plasmid 3826
126 Ga0207664_10098187 3300025929 Unclassified 2415
127 Ga0207690_10101783 3300025932 Bacteria 2053
128 Ga0207706_10002386 3300025933 Bacteria 18343
129 Ga0207706_10003863 3300025933 Bacteria 14262
130 Ga0207706_10049996 3300025933 Bacteria 3694
131 Ga0207709_10074926 3300025935 Bacteria 2161
132 Ga0207670_10001889 3300025936 Bacteria 10941
133 Ga0207669_10027784 3300025937 Bacteria 3104
134 Ga0207691_10004610 3300025940 Bacteria 13346
135 Ga0207711_10006568 3300025941 Bacteria 9792
136 Ga0207689_10006371 3300025942 Bacteria 10450
137 Ga0207679_10025485 3300025945 Bacteria 4068
138 Ga0207651_10003704 3300025960 Bacteria 7560
139 Ga0207712_10000174 3300025961 Bacteria 66500
140 Ga0207712_10013280 3300025961 Bacteria 5279
141 Ga0207712_10016496 3300025961 Bacteria 4785
142 Ga0207668_10041884 3300025972 Bacteria 3098
143 Ga0207703_10013556 3300026035 Bacteria 6350
144 Ga0207708_10006014 3300026075 Bacteria 8995
145 Ga0207641_10001988 3300026088 Bacteria 19523
146 Ga0207641_10005043 3300026088 Bacteria 11314
147 Ga0207648_10020913 3300026089 Bacteria 5891
148 Ga0207676_10004990 3300026095 Bacteria 9400
149 Ga0207674_10010477 3300026116 Bacteria 10496
150 Ga0207674_10038358 3300026116 Bacteria 4973
151 Ga0207675_100001556 3300026118 Bacteria 22976
152 Ga0207675_100003763 3300026118 Bacteria 14783
153 Ga0207683_10223239 3300026121 Bacteria 1717
154 Ga0209969_1010682 3300027360 Bacteria 1315
155 Ga0209971_1001221 3300027682 Bacteria 6473
156 Ga0209974_10006763 3300027876 Bacteria 3980
157 Ga0207428_10069769 3300027907 Bacteria 2763
158 Ga0268266_10013702 3300028379 Bacteria 6982
159 Ga0268266_10036991 3300028379 Bacteria 4159
160 Ga0268266_10074872 3300028379 Bacteria 2940
161 Ga0268265_10000045 3300028380 Bacteria 180378
162 Ga0268265_10004640 3300028380 Bacteria 9485
163 Ga0268264_10000524 3300028381 Bacteria 48665
164 Ga0268264_10014572 3300028381 Bacteria 6458
165 Ga0307513_10089646 3300031456 Bacteria 3139
166 Ga0307509_10000016 3300031507 Bacteria 266991
167 Ga0307509_10187000 3300031507 Bacteria 1928
168 Ga0307408_100000014 3300031548 Bacteria 377369
169 Ga0307408_100001600 3300031548 Bacteria 16741
170 Ga0307514_10000560 3300031649 Bacteria 71030
171 Ga0307405_10000297 3300031731 Bacteria 18437
172 Ga0307410_10002932 3300031852 Bacteria 8409
173 Ga0307406_10000823 3300031901 Bacteria 17414
174 Ga0307412_10000737 3300031911 Bacteria 18923
175 Ga0307412_10033539 3300031911 Bacteria 3264
176 Ga0307416_100003578 3300032002 Bacteria 9166
177 Ga0307416_100144466 3300032002 Bacteria 2169
178 Ga0307416_100292080 3300032002 Bacteria 1614
179 Ga0373927_0004782 3300035695 Bacteria 9430
180 Ga0373925_0000104 3300037068 Bacteria 91673
181 Ga0395900_0258838 3300037418 Bacteria 1739
182 Ga0395898_0036455 3300037466 Bacteria 4883
183 Ga0395905_0007177 3300037471 Bacteria 11126
184 Ga0395901_0002077 3300038443 Bacteria 20538
185 Ga0439447_000067 3300041407 Bacteria 36945
186 Ga0439466_0000144 3300041411 Bacteria 28352
187 Ga0439432_006607 3300042006 Bacteria 4132
188 Ga0439452_007468 3300042010 Bacteria 3345
189 Ga0451576_0022736 3300045051 Bacteria 6793
190 Ga0495627_000127 3300046453 Bacteria 92757
191 Ga0495627_001046 3300046453 Bacteria 18418
192 Ga0495653_0000642 3300046463 Bacteria 26614
193 Ga0495650_0000393 3300046471 Bacteria 74346
194 Ga0495585_0000343 3300046492 Bacteria 45216
195 Ga0495585_0083030 3300046492 Bacteria 1734
196 Ga0495606_0000112 3300046507 Bacteria 138076
197 Ga0495610_0000282 3300046512 Bacteria 53033
198 Ga0495610_0000786 3300046512 Bacteria 29752
199 Ga0495610_0041022 3300046512 Bacteria 2327
200 Ga0495637_0008431 3300046520 Bacteria 5064
201 Ga0495637_0024871 3300046520 Bacteria 2706
202 Ga0495643_0108807 3300046522 Bacteria 1411
203 Ga0495648_0002132 3300046524 Bacteria 18628
204 Ga0495633_0004556 3300046558 Bacteria 8749
205 Ga0495633_0009425 3300046558 Bacteria 5395
206 Ga0495633_0026786 3300046558 Bacteria 2825
207 Ga0495625_0000085 3300046660 Bacteria 151877
208 Ga0495661_0000066 3300046665 Bacteria 127316
209 Ga0495661_0038156 3300046665 Bacteria 2995
210 Ga0495671_0000040 3300046692 Bacteria 167933
211 Ga0495673_0066088 3300047469 Bacteria 1534
212 Ga0495681_0000022 3300047470 Bacteria 165281
213 Ga0495681_0000030 3300047470 Bacteria 129910
214 Ga0495681_0000111 3300047470 Bacteria 70509
215 Ga0495681_0000118 3300047470 Bacteria 69538
216 Ga0495686_0001689 3300047472 Bacteria 22933
217 Ga0496108_0000566 3300048911 Bacteria 28953
218 Ga0496108_0000711 3300048911 Bacteria 25847
219 Ga0496109_0021856 3300048912 Bacteria 5664
220 Ga0496110_0045491 3300048913 Bacteria 3837
221 Ga0496111_0060549 3300048914 Bacteria 2744
222 Ga0496112_0030976 3300048915 Bacteria 5183
223 Ga0496112_0118634 3300048915 Bacteria 2616
224 Ga0496121_0000192 3300048924 Bacteria 136529
225 Ga0496121_0000692 3300048924 Bacteria 62873
226 Ga0496122_0012953 3300048925 Bacteria 8229
227 Ga0496122_0049141 3300048925 Bacteria 3235
228 Ga0496123_0047550 3300048926 Bacteria 2897
229 Ga0496123_0111789 3300048926 Bacteria 1559
230 Ga0496124_0055939 3300048927 Bacteria 3331
231 Ga0496124_0117524 3300048927 Bacteria 2130
232 Ga0496125_0001524 3300048928 Bacteria 33228
233 Ga0496125_0005047 3300048928 Bacteria 14893
234 Ga0496125_0141558 3300048928 Bacteria 1671
235 Ga0496126_0005527 3300048929 Bacteria 14387
236 Ga0496126_0017044 3300048929 Bacteria 7248
237 Ga0495678_014637 3300049459 Bacteria 3642
238 Ga0501290_006368 3300049513 Bacteria 1479
239 Ga0501299_004992 3300049522 Bacteria 2016
240 Ga0501300_000677 3300049523 Bacteria 5122
241 Ga0501072_0032904 3300049588 Bacteria 4061
242 Ga0501211_000349 3300049658 Bacteria 4297
243 Ga0501235_001734 3300049669 Bacteria 4678
244 Ga0501257_000364 3300049686 Bacteria 8828
245 nmdc:mga07m45_99_c1 3300050496 Bacteria 17780
246 nmdc:mga05p37_73523_c1 3300050507 Bacteria 4207
247 nmdc:mga09592_173715_c1 3300050508 Bacteria 1864
248 nmdc:mga0qj67_7509_c1 3300050509 Bacteria 8054
249 nmdc:mga06r32_2068_c1 3300050510 Bacteria 17962
250 nmdc:mga06r32_48_c1 3300050510 Bacteria 73903
251 nmdc:mga08y16_140693_c1 3300050511 Bacteria 2509
252 nmdc:mga08y16_5163_c1 3300050511 Bacteria 7787
253 nmdc:mga08y16_67_c1 3300050511 Bacteria 46512
254 nmdc:mga0a205_148812_c1 3300050515 Bacteria 2241
255 Ga0500651_0054338 3300053093 Bacteria 2510
256 Ga0500608_000285 3300053122 Bacteria 19720
257 Ga0500618_017535 3300053125 Bacteria 1780
258 Ga0500642_0000372 3300053130 Bacteria 15100
259 Ga0500655_000167 3300053133 Bacteria 16069
260 Ga0500564_000817 3300053138 Bacteria 9953
261 Ga0500590_000179 3300053148 Bacteria 18932
262 Ga0500590_027879 3300053148 Bacteria 2930
263 Ga0500616_0000073 3300053153 Bacteria 231290
264 Ga0500624_000017 3300053157 Bacteria 132088
265 Ga0500624_001731 3300053157 Bacteria 3205
266 Ga0500636_0013527 3300053177 Bacteria 4792
267 Ga0500637_0000007 3300053178 Bacteria 93788
268 Ga0500570_006984 3300053724 Bacteria 6162
269 Ga0500625_000005 3300053729 Bacteria 209509
270 Ga0500645_010022 3300053730 Bacteria 3156
271 2585263102 2582581305 Bacteria 4895574
272 2739793784 2739367756 Bacteria 4553612
273 2809064191 2808606401 Bacteria 4586670
274 2809065515 2808606401 Bacteria 4586670
275 2809080159 2808606404 Bacteria 4652788
276 2809081496 2808606404 Bacteria 4652788
277 2809084488 2808606405 Bacteria 4586632
278 2809085847 2808606405 Bacteria 4586632
279 2880522650 2880518877 Bacteria 5012590
280 2880523122 2880518877 Bacteria 5012590
281 2919140022 2919138771 Bacteria 5281312
282 2919140627 2919138771 Bacteria 5281312
283 2919712327 2919709256 Bacteria 4318106
284 2928028227 2928027323 Bacteria 4382488
285 2984558568 2984555340 Bacteria 4247089
286 2993358114 2993356040 Bacteria 4247105
287 Ga0439438_000321
288 SwRhRL2b_contig_1562608
289 SwRhRL2b_contig_3328644
290 SwRhRL2b_contig_522126
291 MBSR1b_contig_2179444
292 Ga0065704_10001714
293 Ga0065704_10074760
294 Ga0065715_10138009
295 Ga0070658_10071531
296 Ga0070658_10323034
297 Ga0070676_10016196
298 Ga0070690_100004253
299 Ga0070670_100007153
300 Ga0070670_100014525
301 Ga0070670_100087481
302 Ga0068869_100001235
303 Ga0070666_10090666
304 Ga0070682_100051874
305 Ga0070689_100005700
306 Ga0070661_100003450
307 Ga0070692_10035735
308 Ga0070668_100016227
309 Ga0070668_100024277
310 Ga0070669_100000052
311 Ga0070675_100000591
312 Ga0070671_100008061
313 Ga0070671_100052663
314 Ga0070673_100000639
315 Ga0070673_100031109
316 Ga0070688_100003743
317 Ga0070659_100071585
318 Ga0070659_100170758
319 Ga0070667_100046038
320 Ga0070714_100158412
321 Ga0070713_100034127
322 Ga0070701_10011544
323 Ga0070700_100014454
324 Ga0070678_100188492
325 Ga0070662_100001082
326 Ga0070662_100002616
327 Ga0070662_100014076
328 Ga0068867_100019389
329 Ga0070685_10013730
330 Ga0070672_100022513
331 Ga0070686_100001134
332 Ga0070665_100003088
333 Ga0070665_100003721
334 Ga0070665_100012654
335 Ga0070664_100000407
336 Ga0068857_100024251
337 Ga0068857_100034658
338 Ga0068852_100071713
339 Ga0068859_100002908
340 Ga0068864_100017127
341 Ga0068861_100001806
342 Ga0068861_100006940
343 Ga0068870_10012194
344 Ga0068863_100000673
345 Ga0068863_100000752
346 Ga0068863_100062324
347 Ga0068858_100007573
348 Ga0068860_100000719
349 Ga0068860_100016946
350 Ga0068862_100000044
351 Ga0068862_100000717
352 Ga0068862_100002969
353 Ga0081540_1014652
354 Ga0070717_10024211
355 Ga0075366_10085948
356 Ga0075370_10002567
357 Ga0075370_10062969
358 Ga0075428_100000169
359 Ga0075428_100080482
360 Ga0075428_100137007
361 Ga0075430_100001922
362 Ga0075431_100004977
363 Ga0075431_100124371
364 Ga0075429_100000416
365 Ga0075429_100021711
366 Ga0075429_100091758
367 Ga0097620_100002908
368 Ga0097620_100090705
369 Ga0111539_10000211
370 Ga0111539_10057748
371 Ga0111539_10256269
372 Ga0105247_10001669
373 Ga0114129_10001827
374 Ga0114129_10005882
375 Ga0105243_10199893
376 Ga0105241_10285717
377 Ga0105248_10000481
378 Ga0105248_10010788
379 Ga0105248_10016758
380 Ga0105237_10342640
381 Ga0105238_10003752
382 Ga0105249_10000045
383 Ga0105249_10020305
384 Ga0105249_10040327
385 Ga0105249_10051581
386 Ga0105148_100109
387 Ga0105147_100659
388 Ga0105246_10000004
389 Ga0157373_10060100
390 Ga0157375_10008494
391 Ga0163163_10000701
392 Ga0157380_10014944
393 Ga0163161_10006435
394 Ga0163161_10016603
395 Ga0163161_10040900
396 Ga0163161_10069231
397 Ga0209147_100270
398 Ga0209257_1000431
399 Ga0207710_10001776
400 Ga0207688_10032141
401 Ga0207680_10073800
402 Ga0207645_10008684
403 Ga0207643_10150697
404 Ga0207705_10069126
405 Ga0207662_10006075
406 Ga0207649_10068093
407 Ga0207694_10010462
408 Ga0207650_10073423
409 Ga0207650_10212868
410 Ga0207659_10002166
411 Ga0207700_10030368
412 Ga0207664_10098187
413 Ga0207690_10101783
414 Ga0207706_10002386
415 Ga0207706_10003863
416 Ga0207706_10049996
417 Ga0207709_10074926
418 Ga0207670_10001889
419 Ga0207669_10027784
420 Ga0207691_10004610
421 Ga0207711_10006568
422 Ga0207689_10006371
423 Ga0207679_10025485
424 Ga0207651_10003704
425 Ga0207712_10000174
426 Ga0207712_10013280
427 Ga0207712_10016496
428 Ga0207668_10041884
429 Ga0207703_10013556
430 Ga0207708_10006014
431 Ga0207641_10001988
432 Ga0207641_10005043
433 Ga0207648_10020913
434 Ga0207676_10004990
435 Ga0207674_10010477
436 Ga0207674_10038358
437 Ga0207675_100001556
438 Ga0207675_100003763
439 Ga0207683_10223239
440 Ga0209969_1010682
441 Ga0209971_1001221
442 Ga0209974_10006763
443 Ga0207428_10069769
444 Ga0268266_10013702
445 Ga0268266_10036991
446 Ga0268266_10074872
447 Ga0268265_10000045
448 Ga0268265_10004640
449 Ga0268264_10000524
450 Ga0268264_10014572
451 Ga0307513_10089646
452 Ga0307509_10000016
453 Ga0307509_10187000
454 Ga0307408_100000014
455 Ga0307408_100001600
456 Ga0307514_10000560
457 Ga0307405_10000297
458 Ga0307410_10002932
459 Ga0307406_10000823
460 Ga0307412_10000737
461 Ga0307412_10033539
462 Ga0307416_100003578
463 Ga0307416_100144466
464 Ga0307416_100292080
465 Ga0373927_0004782
466 Ga0373925_0000104
467 Ga0395900_0258838
468 Ga0395898_0036455
469 Ga0395905_0007177
470 Ga0395901_0002077
471 Ga0439447_000067
472 Ga0439466_0000144
473 Ga0439432_006607
474 Ga0439452_007468
475 Ga0451576_0022736
476 Ga0495627_000127
477 Ga0495627_001046
478 Ga0495653_0000642
479 Ga0495650_0000393
480 Ga0495585_0000343
481 Ga0495585_0083030
482 Ga0495606_0000112
483 Ga0495610_0000282
484 Ga0495610_0000786
485 Ga0495610_0041022
486 Ga0495637_0008431
487 Ga0495637_0024871
488 Ga0495643_0108807
489 Ga0495648_0002132
490 Ga0495633_0004556
491 Ga0495633_0009425
492 Ga0495633_0026786
493 Ga0495625_0000085
494 Ga0495661_0000066
495 Ga0495661_0038156
496 Ga0495671_0000040
497 Ga0495673_0066088
498 Ga0495681_0000022
499 Ga0495681_0000030
500 Ga0495681_0000111
501 Ga0495681_0000118
502 Ga0495686_0001689
503 Ga0496108_0000566
504 Ga0496108_0000711
505 Ga0496109_0021856
506 Ga0496110_0045491
507 Ga0496111_0060549
508 Ga0496112_0030976
509 Ga0496112_0118634
510 Ga0496121_0000192
511 Ga0496121_0000692
512 Ga0496122_0012953
513 Ga0496122_0049141
514 Ga0496123_0047550
515 Ga0496123_0111789
516 Ga0496124_0055939
517 Ga0496124_0117524
518 Ga0496125_0001524
519 Ga0496125_0005047
520 Ga0496125_0141558
521 Ga0496126_0005527
522 Ga0496126_0017044
523 Ga0495678_014637
524 Ga0501290_006368
525 Ga0501299_004992
526 Ga0501300_000677
527 Ga0501072_0032904
528 Ga0501211_000349
529 Ga0501235_001734
530 Ga0501257_000364
531 nmdc:mga07m45_99_c1
532 nmdc:mga05p37_73523_c1
533 nmdc:mga09592_173715_c1
534 nmdc:mga0qj67_7509_c1
535 nmdc:mga06r32_2068_c1
536 nmdc:mga06r32_48_c1
537 nmdc:mga08y16_140693_c1
538 nmdc:mga08y16_5163_c1
539 nmdc:mga08y16_67_c1
540 nmdc:mga0a205_148812_c1
541 Ga0500651_0054338
542 Ga0500608_000285
543 Ga0500618_017535
544 Ga0500642_0000372
545 Ga0500655_000167
546 Ga0500564_000817
547 Ga0500590_000179
548 Ga0500590_027879
549 Ga0500616_0000073
550 Ga0500624_000017
551 Ga0500624_001731
552 Ga0500636_0013527
553 Ga0500637_0000007
554 Ga0500570_006984
555 Ga0500625_000005
556 Ga0500645_010022
557 2585263102
558 2739793784
559 2809064191
560 2809065515
561 2809080159
562 2809081496
563 2809084488
564 2809085847
565 2880522650
566 2880523122
567 2919140022
568 2919140627
569 2919712327
570 2928028227
571 2984558568
572 2993358114

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07786

HGSNAT_cat

Heparan-alpha-glucosaminide N-acetyltransferase, catalytic

86

323

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qfd-assembly1.cif.gz_A co-crystal structure of compound 2 (3-(7-hydroxy-2-oxo-4-phenyl-2h-chromen-6-yl)propanoic acid) and fad bound to human daao at 2.85a 0.3566 191 227
8sgt-assembly1.cif.gz_A cryo-em structure of human ncx1 in ca2+ bound, activated state (group ii in the presence of 0.5 mm ca2+) 0.2715 207 381
8hnb-assembly1.cif.gz_A cryo-em structure of human oatp1b1 in apo state 0.2532 17 383
6w2y-assembly1.cif.gz_A cryoem structure of gabab1b homodimer 0.2458 19 308
6n3i-assembly1.cif.gz_A crystal structure of a double trp xyle mutants (g58w/l315w) 0.2435 18 341
ID Description Score Start End Superfamily
af_P25747_215_375_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4778 222 381 1.20.1250.20
af_Q9VM80_3_333_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.4738 191 221 3.40.50.720
af_P25747_215_375_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4256 222 381 1.20.1250.20
af_A0A087WSB9_85_220_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.3551 153 308 1.20.140.150
af_Q23576_271_466_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3532 14 149 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2D5JZU4-F1-model_v4 Heparan-alpha-glucosaminide N-acetyltransferase catalytic domain-containing protein 0.9773 23 391 GO:0016020
AF-A0A009MER9-F1-model_v4 Heparan-alpha-glucosaminide N-acetyltransferase catalytic domain-containing protein 0.9736 30 391 GO:0016020
AF-A0A158S750-F1-model_v4 Heparan-alpha-glucosaminide N-acetyltransferase catalytic domain-containing protein 0.9714 34 391 GO:0016020
AF-A0A5A9YQN6-F1-model_v4 DUF1624 domain-containing protein 0.9706 111 224 GO:0016020
AF-A0A5C8S005-F1-model_v4 DUF1624 domain-containing protein 0.9686 50 391 GO:0016020

Map