F387714

General Info

Members Datasets Scaffolds Average Seq Length
286 163 264 519

Family's Representative Sequence

Representative Sequence 3300053737|Ga0500601_001077|Ga0500601_001077_1354_3036
Length 560
Sequence VAAGGRRQGISLRPGFVPFPDYLPAAAHRAASVVGSMSFARSLFTVSGLTVMSRVAGFVRDTLTAMFLGAGPVADAFFVAQRLPNLFRSLFAEGAFTAAFVPLYTTEQERHGQEAAQRFAGQALMVLLAALLPFSVLVMLFMPQVMLLLAPGFENSPEKYQLAVHFSTITFPYLALISVTALQTGVLNAQGRFGPGAAAPIAFNLVLIAGLFLARFLNWDVGYTLAWSVTISGVVQMLWLMVSCYRAKLSIPFVKPHMGEASKRLFRRIGPGAIGAGAAQVNLLISTILASTLPTGAVSYLFYADRLNQLPLGIVGIAVATTLLPLLSRHIEAGREGHARHYMGRAIEFCLMLGLPATIGLALAAQPIIQTLFEHGKFTHEDTLATAETLAAYSLGIPAFLLVKAFAAGFFARHDTATPVKVALVAMAVNVVASVLLLGPLKHTGIALANSLAVWTNAILLYISLRRKVGAIGDTTLLRRVPRLLLSAFCMSAATWVLVVLTTDWFTASGLGHKALALSGIIGVSSLVYTVLLQVTGAFKLQELLALLRRKPTMPEIIEG

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
3 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
4 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
5 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
6 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
7 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
8 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
9 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
10 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
11 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
12 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
13 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
14 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
15 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
16 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
17 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
109 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
110 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
115 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
116 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
117 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
118 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
119 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
120 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
121 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
127 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
150 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
151 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
152 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
153 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
154 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
155 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
158 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
159 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
160 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
161 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
162 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
163 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.31
Metatranscriptomes 0
Isolates 7.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.34
Nodule 0.7
Rhizoplane 1.75
Rhizosphere 76.22
Stem 0
Stem Tuber 0
Unclassified 13.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000034 3300002459 Bacteria 86962
2 rootH2_10026912 3300003320 Bacteria 15387
3 Ga0070670_100000016 3300005331 Bacteria 226440
4 Ga0070670_100000033 3300005331 Bacteria 158509
5 Ga0070670_100000575 3300005331 Bacteria 29013
6 Ga0070670_100002773 3300005331 Bacteria 14474
7 Ga0070666_10000273 3300005335 Bacteria 34295
8 Ga0070666_10000551 3300005335 Bacteria 22656
9 Ga0070680_100002528 3300005336 Bacteria 13549
10 Ga0070668_100000003 3300005347 Bacteria 195738
11 Ga0070668_100000019 3300005347 Bacteria 98356
12 Ga0070668_100015742 3300005347 Bacteria 5658
13 Ga0070668_100062151 3300005347 Bacteria 2893
14 Ga0070668_100097570 3300005347 Bacteria 2324
15 Ga0070669_100000005 3300005353 Bacteria 309134
16 Ga0070669_100000096 3300005353 Bacteria 86930
17 Ga0070669_100080094 3300005353 Bacteria 2430
18 Ga0070671_100000045 3300005355 Bacteria 85779
19 Ga0070671_100000645 3300005355 Bacteria 25008
20 Ga0070659_100056337 3300005366 Bacteria 3100
21 Ga0070667_100000035 3300005367 Bacteria 173461
22 Ga0070667_100000094 3300005367 Bacteria 111140
23 Ga0070667_100000111 3300005367 Bacteria 105176
24 Ga0070667_100000425 3300005367 Bacteria 44629
25 Ga0070667_100041822 3300005367 Bacteria 3844
26 Ga0070711_100129567 3300005439 Bacteria 1877
27 Ga0070708_100056795 3300005445 Bacteria 3483
28 Ga0070681_10007334 3300005458 Bacteria 10772
29 Ga0070681_10164229 3300005458 Bacteria 2144
30 Ga0070679_100000410 3300005530 Bacteria 36467
31 Ga0070679_100138683 3300005530 Bacteria 2413
32 Ga0070684_100091054 3300005535 Bacteria 2713
33 Ga0068853_100002796 3300005539 Bacteria 13196
34 Ga0070665_100039230 3300005548 Bacteria 4763
35 Ga0068855_100001082 3300005563 Bacteria 33864
36 Ga0068855_100114905 3300005563 Bacteria 3086
37 Ga0068857_100029421 3300005577 Bacteria 4848
38 Ga0068857_100085683 3300005577 Bacteria 2816
39 Ga0068854_100031651 3300005578 Bacteria 3677
40 Ga0068856_100165591 3300005614 Bacteria 2222
41 Ga0068859_100000162 3300005617 Bacteria 65033
42 Ga0068864_100000017 3300005618 Bacteria 285607
43 Ga0068864_100000042 3300005618 Bacteria 162930
44 Ga0068864_100000659 3300005618 Bacteria 28839
45 Ga0068864_100045589 3300005618 Bacteria 3761
46 Ga0068861_100003298 3300005719 Bacteria 10677
47 Ga0068863_100000018 3300005841 Bacteria 206948
48 Ga0068863_100000057 3300005841 Bacteria 123606
49 Ga0068863_100005544 3300005841 Bacteria 12411
50 Ga0068863_100034640 3300005841 Bacteria 4808
51 Ga0068863_100057980 3300005841 Bacteria 3665
52 Ga0068858_100000954 3300005842 Bacteria 29922
53 Ga0068860_100000143 3300005843 Bacteria 116787
54 Ga0068860_100000176 3300005843 Bacteria 105176
55 Ga0068860_100002770 3300005843 Bacteria 18221
56 Ga0068860_100092476 3300005843 Bacteria 2882
57 Ga0068862_100000005 3300005844 Bacteria 350713
58 Ga0068862_100000010 3300005844 Bacteria 285607
59 Ga0068862_100000168 3300005844 Bacteria 72749
60 Ga0068862_100000877 3300005844 Bacteria 29301
61 Ga0068862_100001062 3300005844 Bacteria 26306
62 Ga0070716_100057625 3300006173 Bacteria 2233
63 Ga0075436_100076518 3300006914 Bacteria 2317
64 Ga0097620_100000162 3300006931 Bacteria 65033
65 Ga0105251_10002120 3300009011 Bacteria 15958
66 Ga0105240_10018002 3300009093 Bacteria 9502
67 Ga0105240_10019364 3300009093 Bacteria 9095
68 Ga0105240_10052486 3300009093 Bacteria 5124
69 Ga0105247_10005739 3300009101 Bacteria 7770
70 Ga0105247_10012383 3300009101 Bacteria 5122
71 Ga0105248_10000105 3300009177 Bacteria 94143
72 Ga0105248_10000455 3300009177 Bacteria 46647
73 Ga0105248_10004227 3300009177 Bacteria 15883
74 Ga0105248_10028887 3300009177 Bacteria 6182
75 Ga0105248_10061601 3300009177 Bacteria 4213
76 Ga0105237_10009506 3300009545 Bacteria 10408
77 Ga0105249_10000726 3300009553 Bacteria 29928
78 Ga0105249_10006675 3300009553 Bacteria 10049
79 Ga0105239_10000060 3300010375 Bacteria 155195
80 Ga0157370_10000971 3300013104 Bacteria 36295
81 Ga0157370_10074536 3300013104 Bacteria 3201
82 Ga0157369_10053983 3300013105 Bacteria 4340
83 Ga0163162_10029572 3300013306 Bacteria 5422
84 Ga0157372_10091105 3300013307 Bacteria 3468
85 Ga0157380_10000316 3300014326 Bacteria 29249
86 Ga0213873_10011296 3300021358 Bacteria 1907
87 Ga0213872_10003163 3300021361 Bacteria 9240
88 Ga0213875_10000105 3300021388 Bacteria 96051
89 Ga0207697_10000413 3300025315 Bacteria 24173
90 Ga0207713_1024951 3300025735 Bacteria 2771
91 Ga0207710_10006441 3300025900 Bacteria 5012
92 Ga0207710_10048757 3300025900 Bacteria 1896
93 Ga0207680_10000535 3300025903 Bacteria 18090
94 Ga0207680_10099263 3300025903 Bacteria 1868
95 Ga0207707_10126452 3300025912 Bacteria 2236
96 Ga0207695_10047714 3300025913 Bacteria 4529
97 Ga0207695_10074251 3300025913 Bacteria 3462
98 Ga0207671_10004497 3300025914 Bacteria 13274
99 Ga0207660_10001882 3300025917 Bacteria 13991
100 Ga0207652_10094983 3300025921 Bacteria 2626
101 Ga0207681_10000003 3300025923 Bacteria 713245
102 Ga0207681_10000030 3300025923 Bacteria 173766
103 Ga0207681_10067936 3300025923 Bacteria 2473
104 Ga0207694_10014013 3300025924 Bacteria 6046
105 Ga0207650_10000012 3300025925 Bacteria 437889
106 Ga0207650_10000057 3300025925 Bacteria 156913
107 Ga0207650_10001273 3300025925 Bacteria 18290
108 Ga0207650_10003128 3300025925 Bacteria 11399
109 Ga0207644_10000017 3300025931 Bacteria 177818
110 Ga0207644_10000754 3300025931 Bacteria 20540
111 Ga0207711_10000031 3300025941 Bacteria 203323
112 Ga0207711_10003396 3300025941 Bacteria 13789
113 Ga0207711_10036682 3300025941 Bacteria 4161
114 Ga0207711_10047881 3300025941 Bacteria 3657
115 Ga0207667_10001543 3300025949 Bacteria 28962
116 Ga0207667_10255846 3300025949 Bacteria 1791
117 Ga0207712_10000476 3300025961 Bacteria 33733
118 Ga0207712_10000565 3300025961 Bacteria 29915
119 Ga0207712_10002695 3300025961 Bacteria 11335
120 Ga0207668_10000006 3300025972 Bacteria 191468
121 Ga0207668_10000296 3300025972 Bacteria 32653
122 Ga0207668_10001238 3300025972 Bacteria 15207
123 Ga0207668_10006565 3300025972 Bacteria 6875
124 Ga0207668_10048369 3300025972 Bacteria 2918
125 Ga0207640_10006006 3300025981 Bacteria 6636
126 Ga0207658_10000026 3300025986 Bacteria 178292
127 Ga0207658_10000072 3300025986 Bacteria 112469
128 Ga0207658_10000901 3300025986 Bacteria 24758
129 Ga0207658_10009679 3300025986 Bacteria 6540
130 Ga0207703_10000234 3300026035 Bacteria 63325
131 Ga0207703_10010614 3300026035 Bacteria 7197
132 Ga0207639_10003148 3300026041 Bacteria 11093
133 Ga0207641_10000002 3300026088 Bacteria 981004
134 Ga0207641_10000096 3300026088 Bacteria 123585
135 Ga0207641_10000660 3300026088 Bacteria 37609
136 Ga0207641_10000779 3300026088 Bacteria 34088
137 Ga0207641_10001802 3300026088 Bacteria 20604
138 Ga0207641_10003011 3300026088 Bacteria 15212
139 Ga0207641_10045531 3300026088 Bacteria 3694
140 Ga0207676_10000005 3300026095 Bacteria 698744
141 Ga0207676_10000009 3300026095 Bacteria 545256
142 Ga0207676_10012288 3300026095 Bacteria 6130
143 Ga0207676_10033271 3300026095 Bacteria 3893
144 Ga0207674_10000748 3300026116 Bacteria 42600
145 Ga0207674_10018387 3300026116 Bacteria 7598
146 Ga0207674_10028354 3300026116 Bacteria 5911
147 Ga0207675_100003556 3300026118 Bacteria 15186
148 Ga0268265_10000001 3300028380 Bacteria 1230727
149 Ga0268265_10000003 3300028380 Bacteria 949201
150 Ga0268265_10000074 3300028380 Bacteria 127599
151 Ga0268265_10000424 3300028380 Bacteria 45348
152 Ga0268265_10001457 3300028380 Bacteria 19873
153 Ga0268264_10000076 3300028381 Bacteria 255518
154 Ga0268264_10000215 3300028381 Bacteria 113994
155 Ga0268264_10000234 3300028381 Bacteria 105863
156 Ga0268264_10003069 3300028381 Bacteria 14459
157 Ga0268264_10004464 3300028381 Bacteria 11937
158 Ga0307517_10137255 3300028786 Bacteria 1734
159 Ga0265331_10000473 3300031250 Bacteria 38543
160 Ga0265327_10000620 3300031251 Bacteria 58447
161 Ga0307406_10041655 3300031901 Bacteria 2862
162 Ga0307412_10001827 3300031911 Bacteria 11791
163 Ga0307412_10023886 3300031911 Bacteria 3768
164 Ga0307414_10014236 3300032004 Bacteria 4760
165 Ga0373934_0042179 3300035086 Bacteria 1802
166 Ga0373955_0006321 3300035172 Bacteria 5397
167 Ga0373924_0028308 3300035410 Bacteria 2233
168 Ga0373933_0058460 3300035724 Bacteria 2319
169 Ga0373937_0004376 3300036401 Bacteria 11996
170 Ga0373937_0020791 3300036401 Bacteria 5887
171 Ga0373937_0135243 3300036401 Bacteria 2305
172 Ga0436364_0184827 3300037853 Bacteria 146498
173 Ga0436364_1140114 3300037853 Bacteria 3088
174 Ga0436361_0169644 3300039447 Bacteria 41174
175 Ga0436363_0160521 3300039450 Bacteria 1843
176 Ga0453684_0128224 3300044712 Bacteria 3049
177 Ga0451576_0031870 3300045051 Bacteria 5618
178 Ga0495638_0000014 3300046460 Bacteria 417060
179 Ga0495650_0001110 3300046471 Bacteria 29443
180 Ga0495583_0000072 3300046506 Bacteria 182057
181 Ga0495583_0000201 3300046506 Bacteria 100380
182 Ga0495606_0000842 3300046507 Bacteria 46207
183 Ga0495616_0000013 3300046513 Bacteria 202334
184 Ga0495616_0015286 3300046513 Bacteria 4269
185 Ga0495632_0000171 3300046519 Bacteria 66639
186 Ga0495637_0017991 3300046520 Bacteria 3283
187 Ga0495643_0040324 3300046522 Bacteria 2550
188 Ga0495648_0000021 3300046524 Bacteria 246945
189 Ga0495597_0008249 3300046542 Bacteria 5229
190 Ga0495633_0017149 3300046558 Bacteria 3711
191 Ga0495633_0017924 3300046558 Bacteria 3605
192 Ga0495668_0011160 3300046616 Bacteria 5396
193 Ga0495668_0012949 3300046616 Bacteria 4937
194 Ga0495669_0057104 3300046684 Bacteria 1761
195 Ga0495671_0000028 3300046692 Bacteria 234938
196 Ga0495671_0012961 3300046692 Bacteria 4536
197 Ga0495673_0000058 3300047469 Bacteria 235044
198 Ga0495673_0008417 3300047469 Bacteria 5811
199 Ga0495673_0024803 3300047469 Bacteria 2890
200 Ga0495686_0000201 3300047472 Bacteria 110982
201 Ga0495686_0000368 3300047472 Bacteria 73088
202 Ga0495686_0001220 3300047472 Bacteria 29446
203 Ga0495686_0001904 3300047472 Bacteria 20835
204 Ga0495686_0003497 3300047472 Bacteria 13569
205 Ga0496102_0000143 3300048905 Bacteria 96813
206 Ga0496102_0118254 3300048905 Bacteria 2474
207 Ga0496103_0000098 3300048906 Bacteria 96109
208 Ga0496111_0011075 3300048914 Bacteria 6070
209 Ga0496115_0044630 3300048918 Bacteria 3537
210 Ga0496116_0001473 3300048919 Bacteria 26338
211 Ga0496117_0000121 3300048920 Bacteria 171532
212 Ga0496117_0011238 3300048920 Bacteria 8037
213 Ga0496117_0011739 3300048920 Bacteria 7811
214 Ga0496117_0106690 3300048920 Bacteria 1757
215 Ga0496118_0000095 3300048921 Bacteria 164850
216 Ga0496118_0000332 3300048921 Bacteria 80480
217 Ga0496118_0008908 3300048921 Bacteria 10252
218 Ga0496118_0029839 3300048921 Bacteria 4564
219 Ga0496119_0014638 3300048922 Bacteria 6114
220 Ga0496119_0042808 3300048922 Bacteria 2868
221 Ga0496121_0000173 3300048924 Bacteria 143397
222 Ga0496121_0000374 3300048924 Bacteria 92048
223 Ga0496121_0003854 3300048924 Bacteria 20866
224 Ga0496122_0005310 3300048925 Bacteria 15411
225 Ga0496122_0012502 3300048925 Bacteria 8440
226 Ga0496123_0001988 3300048926 Bacteria 26435
227 Ga0496124_0000119 3300048927 Bacteria 163996
228 Ga0496125_0020658 3300048928 Bacteria 6176
229 Ga0496126_0002709 3300048929 Bacteria 23404
230 Ga0495682_0007900 3300049460 Bacteria 4209
231 Ga0501032_0000062 3300049569 Bacteria 93886
232 Ga0501033_0101674 3300049570 Bacteria 2097
233 Ga0501034_0000001 3300049571 Bacteria 2184493
234 Ga0501034_0053276 3300049571 Bacteria 4075
235 Ga0501034_0172317 3300049571 Bacteria 2131
236 Ga0501036_0018350 3300049572 Bacteria 5859
237 Ga0501038_0040605 3300049574 Bacteria 4061
238 Ga0501039_0000041 3300049575 Bacteria 113488
239 Ga0501043_0016347 3300049579 Bacteria 5820
240 Ga0501047_0001707 3300049581 Bacteria 21355
241 Ga0501249_000238 3300049679 Bacteria 16346
242 Ga0501044_0082012 3300049823 Bacteria 3264
243 Ga0495619_0015739 3300053085 Bacteria 4788
244 Ga0500643_000195 3300053087 Bacteria 57960
245 Ga0500643_002495 3300053087 Bacteria 9439
246 Ga0500643_014133 3300053087 Bacteria 2787
247 Ga0500555_000576 3300053103 Bacteria 14497
248 Ga0500555_012712 3300053103 Bacteria 2424
249 Ga0500562_000120 3300053108 Bacteria 25714
250 Ga0500592_000031 3300053116 Bacteria 47686
251 Ga0500594_0005695 3300053118 Bacteria 2770
252 Ga0500597_005661 3300053120 Bacteria 4059
253 Ga0500655_000093 3300053133 Bacteria 23271
254 Ga0500604_0000987 3300053151 Bacteria 7918
255 Ga0500622_0003135 3300053156 Bacteria 11340
256 Ga0500624_000008 3300053157 Bacteria 181801
257 Ga0500624_000060 3300053157 Bacteria 68534
258 Ga0500624_000409 3300053157 Bacteria 13234
259 Ga0500627_0000090 3300053158 Bacteria 30885
260 Ga0500636_0017044 3300053177 Bacteria 4286
261 Ga0500637_0000101 3300053178 Bacteria 31079
262 Ga0500637_0055456 3300053178 Bacteria 2263
263 Ga0500570_000450 3300053724 Bacteria 15827
264 Ga0500601_001077 3300053737 Bacteria 3086

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036401 Ga0373937_0135243 Ga0373937_0135243_843_2285 448
2 3300031251 Ga0265327_10000620 Ga0265327_1000062020 464
3 3300005577 Ga0068857_100085683 Ga0068857_1000856832 465
4 3300026116 Ga0207674_10028354 Ga0207674_100283544 465
5 3300031911 Ga0307412_10023886 Ga0307412_100238863 465
6 3300025924 Ga0207694_10014013 Ga0207694_100140134 470
7 3300035172 Ga0373955_0006321 Ga0373955_0006321_527_2077 472
8 3300035410 Ga0373924_0028308 Ga0373924_0028308_152_1702 472
9 3300036401 Ga0373937_0020791 Ga0373937_0020791_3045_4595 472
10 3300053085 Ga0495619_0015739 Ga0495619_0015739_319_1869 472
11 3300053108 Ga0500562_000120 Ga0500562_000120_11949_13514 474
12 3300005563 Ga0068855_100001082 Ga0068855_10000108213 479
13 3300005614 Ga0068856_100165591 Ga0068856_1001655912 479
14 3300009093 Ga0105240_10019364 Ga0105240_100193649 479
15 3300025913 Ga0207695_10047714 Ga0207695_100477142 479
16 3300025949 Ga0207667_10001543 Ga0207667_100015439 479
17 3300044712 Ga0453684_0128224 Ga0453684_0128224_1215_2744 482
18 3300047472 Ga0495686_0000368 Ga0495686_0000368_38785_40350 483
19 3300021361 Ga0213872_10003163 Ga0213872_1000316311 484
20 3300039447 Ga0436361_0169644 Ga0436361_0169644_33315_34889 484
21 3300006173 Ga0070716_100057625 Ga0070716_1000576252 486
22 3300021358 Ga0213873_10011296 Ga0213873_100112962 487
23 3300046506 Ga0495583_0000201 Ga0495583_0000201_66372_67934 490
24 3300048914 Ga0496111_0011075 Ga0496111_0011075_326_1885 490
25 3300048925 Ga0496122_0005310 Ga0496122_0005310_2864_4423 490
26 3300048926 Ga0496123_0001988 Ga0496123_0001988_10423_11982 490
27 3300049460 Ga0495682_0007900 Ga0495682_0007900_105_1667 490
28 3300053103 Ga0500555_000576 Ga0500555_000576_7451_9013 490
29 3300009177 Ga0105248_10028887 Ga0105248_100288873 495
30 3300025941 Ga0207711_10047881 Ga0207711_100478813 495
31 3300049569 Ga0501032_0000062 Ga0501032_0000062_14341_15870 495
32 3300049571 Ga0501034_0000001 Ga0501034_0000001_1892018_1893547 495
33 3300049572 Ga0501036_0018350 Ga0501036_0018350_4279_5808 495
34 3300049575 Ga0501039_0000041 Ga0501039_0000041_29175_30704 495
35 iso_pu_bacteria 2897803580 2897806912 495
36 3300046507 Ga0495606_0000842 Ga0495606_0000842_19360_20925 496
37 3300053103 Ga0500555_012712 Ga0500555_012712_607_2172 496
38 iso_pu_bacteria 2597490356 2599101359 496
39 iso_pu_bacteria 2842333319 2842333879 496
40 iso_pu_bacteria 2846952575 2846953917 496
41 iso_pu_bacteria 2848858292 2848859896 496
42 3300005439 Ga0070711_100129567 Ga0070711_1001295672 497
43 3300037853 Ga0436364_1140114 Ga0436364_1140114_365_1915 497
44 3300005445 Ga0070708_100056795 Ga0070708_1000567952 498
45 iso_pu_bacteria 2511231221 2512033454 498
46 iso_pu_bacteria 2522572158 2523103432 498
47 iso_pu_bacteria 2597490356 2599102724 498
48 iso_pu_bacteria 2842333319 2842335581 498
49 iso_pu_bacteria 2846952575 2846952598 498
50 iso_pu_bacteria 2848858292 2848861088 498
51 iso_pu_bacteria 2897803580 2897808938 498
52 3300003320 rootH2_10026912 rootH2_1002691211 499
53 3300005336 Ga0070680_100002528 Ga0070680_1000025285 499
54 3300005366 Ga0070659_100056337 Ga0070659_1000563372 499
55 3300005458 Ga0070681_10007334 Ga0070681_100073345 499
56 3300005458 Ga0070681_10164229 Ga0070681_101642292 499
57 3300005530 Ga0070679_100000410 Ga0070679_10000041014 499
58 3300005530 Ga0070679_100138683 Ga0070679_1001386833 499
59 3300005535 Ga0070684_100091054 Ga0070684_1000910542 499
60 3300006914 Ga0075436_100076518 Ga0075436_1000765181 499
61 3300013104 Ga0157370_10000971 Ga0157370_1000097128 499
62 3300013104 Ga0157370_10074536 Ga0157370_100745362 499
63 3300013105 Ga0157369_10053983 Ga0157369_100539832 499
64 3300013307 Ga0157372_10091105 Ga0157372_100911053 499
65 3300025912 Ga0207707_10126452 Ga0207707_101264522 499
66 3300025917 Ga0207660_10001882 Ga0207660_100018828 499
67 3300025921 Ga0207652_10094983 Ga0207652_100949832 499
68 3300028786 Ga0307517_10137255 Ga0307517_101372552 499
69 3300035086 Ga0373934_0042179 Ga0373934_0042179_114_1679 499
70 3300035724 Ga0373933_0058460 Ga0373933_0058460_72_1736 499
71 3300036401 Ga0373937_0004376 Ga0373937_0004376_6402_8066 499
72 3300046460 Ga0495638_0000014 Ga0495638_0000014_354101_355687 499
73 3300046506 Ga0495583_0000072 Ga0495583_0000072_119319_120905 499
74 3300046519 Ga0495632_0000171 Ga0495632_0000171_55651_57237 499
75 3300046520 Ga0495637_0017991 Ga0495637_0017991_114_1676 499
76 3300046522 Ga0495643_0040324 Ga0495643_0040324_792_2354 499
77 3300046524 Ga0495648_0000021 Ga0495648_0000021_61322_62908 499
78 3300046542 Ga0495597_0008249 Ga0495597_0008249_229_1791 499
79 3300046558 Ga0495633_0017924 Ga0495633_0017924_417_2003 499
80 3300046616 Ga0495668_0011160 Ga0495668_0011160_3331_4893 499
81 3300046684 Ga0495669_0057104 Ga0495669_0057104_105_1667 499
82 3300046692 Ga0495671_0000028 Ga0495671_0000028_172147_173733 499
83 3300047469 Ga0495673_0000058 Ga0495673_0000058_61258_62844 499
84 3300048918 Ga0496115_0044630 Ga0496115_0044630_155_1720 499
85 3300053156 Ga0500622_0003135 Ga0500622_0003135_8365_9927 499
86 3300053177 Ga0500636_0017044 Ga0500636_0017044_884_2446 499
87 3300053724 Ga0500570_000450 Ga0500570_000450_12979_14541 499
88 3300039450 Ga0436363_0160521 Ga0436363_0160521_274_1818 500
89 3300049571 Ga0501034_0053276 Ga0501034_0053276_1457_3016 501
90 3300049571 Ga0501034_0172317 Ga0501034_0172317_314_1858 501
91 3300031250 Ga0265331_10000473 Ga0265331_1000047323 502
92 3300048925 Ga0496122_0012502 Ga0496122_0012502_5026_6600 502
93 3300053133 Ga0500655_000093 Ga0500655_000093_8725_10287 502
94 3300053178 Ga0500637_0055456 Ga0500637_0055456_577_2151 502
95 3300053737 Ga0500601_001077 Ga0500601_001077_1354_3036 502
96 iso_pu_bacteria 8054002106 8054005862 502
97 3300032004 Ga0307414_10014236 Ga0307414_100142362 503
98 iso_pu_bacteria 2582581305 2585260266 503
99 3300005347 Ga0070668_100015742 Ga0070668_1000157424 504
100 3300025972 Ga0207668_10006565 Ga0207668_100065653 504
101 3300048920 Ga0496117_0011739 Ga0496117_0011739_446_2029 504
102 3300048921 Ga0496118_0008908 Ga0496118_0008908_2638_4221 504
103 3300005331 Ga0070670_100000016 Ga0070670_10000001679 507
104 3300005367 Ga0070667_100000425 Ga0070667_1000004255 507
105 3300005618 Ga0068864_100000017 Ga0068864_100000017210 507
106 3300005841 Ga0068863_100000018 Ga0068863_100000018130 507
107 3300005844 Ga0068862_100000010 Ga0068862_100000010101 507
108 3300009011 Ga0105251_10002120 Ga0105251_100021209 507
109 3300009101 Ga0105247_10005739 Ga0105247_100057396 507
110 3300009177 Ga0105248_10000105 Ga0105248_100001056 507
111 3300009177 Ga0105248_10004227 Ga0105248_1000422713 507
112 3300009553 Ga0105249_10000726 Ga0105249_100007265 507
113 3300013306 Ga0163162_10029572 Ga0163162_100295726 507
114 3300025735 Ga0207713_1024951 Ga0207713_10249513 507
115 3300025900 Ga0207710_10048757 Ga0207710_100487571 507
116 3300025925 Ga0207650_10000057 Ga0207650_1000005780 507
117 3300025941 Ga0207711_10000031 Ga0207711_10000031101 507
118 3300025941 Ga0207711_10036682 Ga0207711_100366822 507
119 3300025961 Ga0207712_10000565 Ga0207712_100005655 507
120 3300026088 Ga0207641_10000002 Ga0207641_10000002385 507
121 3300026095 Ga0207676_10000005 Ga0207676_10000005423 507
122 3300028380 Ga0268265_10000003 Ga0268265_10000003605 507
123 3300045051 Ga0451576_0031870 Ga0451576_0031870_2583_4154 507
124 3300046513 Ga0495616_0015286 Ga0495616_0015286_141_1718 507
125 3300047469 Ga0495673_0008417 Ga0495673_0008417_1061_2623 507
126 3300047472 Ga0495686_0001220 Ga0495686_0001220_496_2061 507
127 3300047472 Ga0495686_0001904 Ga0495686_0001904_820_2385 507
128 3300047472 Ga0495686_0003497 Ga0495686_0003497_2915_4480 507
129 3300048905 Ga0496102_0000143 Ga0496102_0000143_59182_60795 507
130 3300048906 Ga0496103_0000098 Ga0496103_0000098_59166_60779 507
131 3300048919 Ga0496116_0001473 Ga0496116_0001473_6109_7722 507
132 3300048920 Ga0496117_0000121 Ga0496117_0000121_42867_44480 507
133 3300048920 Ga0496117_0011238 Ga0496117_0011238_2203_3777 507
134 3300048921 Ga0496118_0000095 Ga0496118_0000095_127053_128666 507
135 3300048921 Ga0496118_0000332 Ga0496118_0000332_15834_17408 507
136 3300048922 Ga0496119_0042808 Ga0496119_0042808_761_2374 507
137 3300048927 Ga0496124_0000119 Ga0496124_0000119_127053_128666 507
138 3300048928 Ga0496125_0020658 Ga0496125_0020658_2952_4514 507
139 3300049679 Ga0501249_000238 Ga0501249_000238_2834_4411 507
140 3300053087 Ga0500643_000195 Ga0500643_000195_41576_43141 507
141 3300053087 Ga0500643_014133 Ga0500643_014133_133_1695 507
142 3300053116 Ga0500592_000031 Ga0500592_000031_20004_21569 507
143 3300053158 Ga0500627_0000090 Ga0500627_0000090_8372_9937 507
144 iso_pu_bacteria 2643221541 2643728052 508
145 iso_pu_bacteria 2643221605 2644039214 508
146 iso_pu_bacteria 2643221606 2644042998 508
147 iso_pu_bacteria 2643221671 2644395571 508
148 iso_pu_bacteria 2808606401 2809064893 508
149 iso_pu_bacteria 2808606404 2809080941 508
150 iso_pu_bacteria 2808606405 2809085225 508
151 iso_pu_bacteria 2880518877 2880521958 508
152 3300048924 Ga0496121_0000374 Ga0496121_0000374_33007_34590 510
153 3300005367 Ga0070667_100000111 Ga0070667_1000001114 511
154 3300005578 Ga0068854_100031651 Ga0068854_1000316512 511
155 3300005843 Ga0068860_100000176 Ga0068860_1000001764 511
156 3300009093 Ga0105240_10018002 Ga0105240_1001800211 511
157 3300009093 Ga0105240_10052486 Ga0105240_100524862 511
158 3300009545 Ga0105237_10009506 Ga0105237_100095068 511
159 3300010375 Ga0105239_10000060 Ga0105239_1000006033 511
160 3300021388 Ga0213875_10000105 Ga0213875_1000010582 511
161 3300025903 Ga0207680_10099263 Ga0207680_100992631 511
162 3300025913 Ga0207695_10074251 Ga0207695_100742512 511
163 3300025914 Ga0207671_10004497 Ga0207671_100044975 511
164 3300025986 Ga0207658_10000901 Ga0207658_1000090123 511
165 3300026088 Ga0207641_10045531 Ga0207641_100455312 511
166 3300028381 Ga0268264_10000234 Ga0268264_100002343 511
167 3300037853 Ga0436364_0184827 Ga0436364_0184827_29044_30633 511
168 3300047469 Ga0495673_0024803 Ga0495673_0024803_480_2066 511
169 3300047472 Ga0495686_0000201 Ga0495686_0000201_54261_55847 511
170 3300048920 Ga0496117_0106690 Ga0496117_0106690_85_1677 511
171 3300048921 Ga0496118_0029839 Ga0496118_0029839_2949_4541 511
172 3300048922 Ga0496119_0014638 Ga0496119_0014638_2110_3696 511
173 3300048924 Ga0496121_0000173 Ga0496121_0000173_107895_109481 511
174 3300048924 Ga0496121_0003854 Ga0496121_0003854_15946_17532 511
175 3300048929 Ga0496126_0002709 Ga0496126_0002709_3527_5113 511
176 3300049570 Ga0501033_0101674 Ga0501033_0101674_293_1879 511
177 3300049579 Ga0501043_0016347 Ga0501043_0016347_3835_5412 511
178 3300049581 Ga0501047_0001707 Ga0501047_0001707_579_2156 511
179 3300049823 Ga0501044_0082012 Ga0501044_0082012_1273_2850 511
180 3300053087 Ga0500643_002495 Ga0500643_002495_2045_3619 511
181 3300053120 Ga0500597_005661 Ga0500597_005661_101_1684 511
182 3300053157 Ga0500624_000008 Ga0500624_000008_36383_37966 511
183 3300053178 Ga0500637_0000101 Ga0500637_0000101_8982_10565 511
184 3300002459 JGI24751J29686_10000034 JGI24751J29686_1000003426 512
185 3300005331 Ga0070670_100000033 Ga0070670_100000033106 512
186 3300005331 Ga0070670_100000575 Ga0070670_10000057520 512
187 3300005331 Ga0070670_100002773 Ga0070670_10000277311 512
188 3300005335 Ga0070666_10000273 Ga0070666_1000027311 512
189 3300005335 Ga0070666_10000551 Ga0070666_1000055118 512
190 3300005347 Ga0070668_100000003 Ga0070668_100000003131 512
191 3300005347 Ga0070668_100000019 Ga0070668_10000001981 512
192 3300005347 Ga0070668_100062151 Ga0070668_1000621512 512
193 3300005347 Ga0070668_100097570 Ga0070668_1000975702 512
194 3300005353 Ga0070669_100000005 Ga0070669_10000000519 512
195 3300005353 Ga0070669_100000096 Ga0070669_10000009630 512
196 3300005353 Ga0070669_100080094 Ga0070669_1000800942 512
197 3300005355 Ga0070671_100000045 Ga0070671_10000004581 512
198 3300005355 Ga0070671_100000645 Ga0070671_10000064518 512
199 3300005367 Ga0070667_100000035 Ga0070667_100000035149 512
200 3300005367 Ga0070667_100000094 Ga0070667_10000009497 512
201 3300005367 Ga0070667_100041822 Ga0070667_1000418223 512
202 3300005539 Ga0068853_100002796 Ga0068853_1000027965 512
203 3300005548 Ga0070665_100039230 Ga0070665_1000392302 512
204 3300005563 Ga0068855_100114905 Ga0068855_1001149053 512
205 3300005577 Ga0068857_100029421 Ga0068857_1000294213 512
206 3300005617 Ga0068859_100000162 Ga0068859_10000016283 512
207 3300005618 Ga0068864_100000042 Ga0068864_100000042108 512
208 3300005618 Ga0068864_100000659 Ga0068864_10000065919 512
209 3300005618 Ga0068864_100045589 Ga0068864_1000455893 512
210 3300005719 Ga0068861_100003298 Ga0068861_1000032982 512
211 3300005841 Ga0068863_100000057 Ga0068863_10000005797 512
212 3300005841 Ga0068863_100005544 Ga0068863_1000055448 512
213 3300005841 Ga0068863_100034640 Ga0068863_1000346403 512
214 3300005841 Ga0068863_100057980 Ga0068863_1000579802 512
215 3300005842 Ga0068858_100000954 Ga0068858_10000095411 512
216 3300005843 Ga0068860_100000143 Ga0068860_100000143114 512
217 3300005843 Ga0068860_100002770 Ga0068860_10000277017 512
218 3300005843 Ga0068860_100092476 Ga0068860_1000924761 512
219 3300005844 Ga0068862_100000005 Ga0068862_10000000526 512
220 3300005844 Ga0068862_100000168 Ga0068862_10000016855 512
221 3300005844 Ga0068862_100000877 Ga0068862_1000008773 512
222 3300005844 Ga0068862_100001062 Ga0068862_10000106218 512
223 3300006931 Ga0097620_100000162 Ga0097620_10000016283 512
224 3300009101 Ga0105247_10012383 Ga0105247_100123833 512
225 3300009177 Ga0105248_10000455 Ga0105248_1000045536 512
226 3300009177 Ga0105248_10061601 Ga0105248_100616014 512
227 3300009553 Ga0105249_10006675 Ga0105249_1000667511 512
228 3300014326 Ga0157380_10000316 Ga0157380_1000031613 512
229 3300025315 Ga0207697_10000413 Ga0207697_100004139 512
230 3300025900 Ga0207710_10006441 Ga0207710_100064414 512
231 3300025903 Ga0207680_10000535 Ga0207680_1000053524 512
232 3300025923 Ga0207681_10000003 Ga0207681_10000003292 512
233 3300025923 Ga0207681_10000030 Ga0207681_10000030171 512
234 3300025923 Ga0207681_10067936 Ga0207681_100679362 512
235 3300025925 Ga0207650_10000012 Ga0207650_10000012300 512
236 3300025925 Ga0207650_10001273 Ga0207650_1000127319 512
237 3300025925 Ga0207650_10003128 Ga0207650_100031286 512
238 3300025931 Ga0207644_10000017 Ga0207644_10000017173 512
239 3300025931 Ga0207644_10000754 Ga0207644_100007545 512
240 3300025941 Ga0207711_10003396 Ga0207711_100033968 512
241 3300025949 Ga0207667_10255846 Ga0207667_102558461 512
242 3300025961 Ga0207712_10000476 Ga0207712_1000047630 512
243 3300025961 Ga0207712_10002695 Ga0207712_1000269511 512
244 3300025972 Ga0207668_10000006 Ga0207668_10000006127 512
245 3300025972 Ga0207668_10000296 Ga0207668_1000029632 512
246 3300025972 Ga0207668_10001238 Ga0207668_1000123810 512
247 3300025972 Ga0207668_10048369 Ga0207668_100483692 512
248 3300025981 Ga0207640_10006006 Ga0207640_100060063 512
249 3300025986 Ga0207658_10000026 Ga0207658_1000002673 512
250 3300025986 Ga0207658_10000072 Ga0207658_1000007223 512
251 3300025986 Ga0207658_10009679 Ga0207658_100096794 512
252 3300026035 Ga0207703_10000234 Ga0207703_1000023458 512
253 3300026035 Ga0207703_10010614 Ga0207703_100106146 512
254 3300026041 Ga0207639_10003148 Ga0207639_100031484 512
255 3300026088 Ga0207641_10000096 Ga0207641_1000009694 512
256 3300026088 Ga0207641_10000660 Ga0207641_1000066010 512
257 3300026088 Ga0207641_10000779 Ga0207641_1000077910 512
258 3300026088 Ga0207641_10001802 Ga0207641_100018027 512
259 3300026088 Ga0207641_10003011 Ga0207641_1000301110 512
260 3300026095 Ga0207676_10000009 Ga0207676_10000009289 512
261 3300026095 Ga0207676_10012288 Ga0207676_100122885 512
262 3300026095 Ga0207676_10033271 Ga0207676_100332712 512
263 3300026116 Ga0207674_10000748 Ga0207674_100007484 512
264 3300026116 Ga0207674_10018387 Ga0207674_100183876 512
265 3300026118 Ga0207675_100003556 Ga0207675_10000355621 512
266 3300028380 Ga0268265_10000001 Ga0268265_10000001118 512
267 3300028380 Ga0268265_10000074 Ga0268265_100000744 512
268 3300028380 Ga0268265_10000424 Ga0268265_1000042422 512
269 3300028380 Ga0268265_10001457 Ga0268265_1000145717 512
270 3300028381 Ga0268264_10000076 Ga0268264_10000076114 512
271 3300028381 Ga0268264_10000215 Ga0268264_10000215109 512
272 3300028381 Ga0268264_10003069 Ga0268264_100030694 512
273 3300028381 Ga0268264_10004464 Ga0268264_100044642 512
274 3300031901 Ga0307406_10041655 Ga0307406_100416553 512
275 3300031911 Ga0307412_10001827 Ga0307412_1000182710 512
276 3300046471 Ga0495650_0001110 Ga0495650_0001110_10744_12330 512
277 3300046513 Ga0495616_0000013 Ga0495616_0000013_89585_91171 512
278 3300046558 Ga0495633_0017149 Ga0495633_0017149_549_2135 512
279 3300046616 Ga0495668_0012949 Ga0495668_0012949_2306_3892 512
280 3300046692 Ga0495671_0012961 Ga0495671_0012961_2314_3891 512
281 3300048905 Ga0496102_0118254 Ga0496102_0118254_113_1702 512
282 3300049574 Ga0501038_0040605 Ga0501038_0040605_2315_3913 512
283 3300053118 Ga0500594_0005695 Ga0500594_0005695_438_2015 512
284 3300053151 Ga0500604_0000987 Ga0500604_0000987_5895_7481 512
285 3300053157 Ga0500624_000060 Ga0500624_000060_39180_40769 512
286 3300053157 Ga0500624_000409 Ga0500624_000409_5333_6919 512

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03023

MurJ

Lipid II flippase MurJ

64

515

0.96

PF14667

Polysacc_synt_C

Polysaccharide biosynthesis C-terminal domain

389

538

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cc4-assembly1.cif.gz_A structure of murj from escherichia coli 0.918 17 498
7waw-assembly1.cif.gz_A murj inward closed form 0.9127 10 495
7waw-assembly1.cif.gz_A murj inward closed form 0.8932 10 495
6cc4-assembly1.cif.gz_A structure of murj from escherichia coli 0.8678 17 498
7wag-assembly1.cif.gz_A crystal structure of murj squeezed form 0.8654 1 509
ID Description Score Start End Superfamily
af_P76352_100_262_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6996 9 179 1.20.1250.20
af_P76352_100_262_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6791 9 179 1.20.1250.20
af_B7FAP5_60_414_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.5667 42 423 1.10.3080.10
af_B7FAP5_60_414_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.5533 42 423 1.10.3080.10
af_P97829_142_290_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.3925 84 215 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A0B8QJA4-F1-model_v4 Proposed peptidoglycan lipid II flippase murJ 0.9332 88 459 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-J1JZ03-F1-model_v4 Probable lipid II flippase MurJ 0.9318 1 510 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
GO:0071555
AF-A0A7S1EKD6-F1-model_v4 Polysaccharide biosynthesis protein C-terminal domain-containing protein 0.9317 242 444 GO:0005886
GO:0008360
GO:0015648
GO:0034204
AF-A0A7C1MA24-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9309 5 305 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-J1JZ03-F1-model_v4 Probable lipid II flippase MurJ 0.93 1 510 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
GO:0071555

Feature Viewer

pLDDT pTM Quality
83.95 0.84 High
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Predicted Structure (AlphaFold2)

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