F387589

General Info

Members Datasets Scaffolds Average Seq Length
286 203 263 256

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0101036|Ga0495638_0101036_81_932
Length 283
Sequence MDADTVFGHGDLLVAYFYDIMQYRATSRNFTHMLTRHRKELLLARLRQDGQIVAKSLSEELGLSEDTIRRDLRDLASEGLLQRVHGGALPASPAMGNFAERQRISSDAKPAIARAAAAMIAPGQVVFIDGGTTAVQLARALPRDLQCTVVTHSPSVAVELAEHPLIEVVLIGGRLFKHSIVAMGPSALEAIAQIRTDIYFMGVCSVHPESGISTGDFDEAGVKRAISNMAQRTVVLASPEKLVTASPYQIAPLSQVSAIVVNGDAPEALLARYRSLDIDVIKA

Samples

Sample ID Description Type Environment
1 2643221645 Massilia sp. Root351 Isolate Unclassified
2 2643221664 Massilia sp. Root418 Isolate Unclassified
3 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
4 2738541280 Massilia sp. GV090 Isolate Unclassified
5 2738541297 Duganella sp. GV083 Isolate Unclassified
6 2738541300 Massilia sp. GV016 Isolate Unclassified
7 2738541357 Duganella sp. GV053 Isolate Unclassified
8 2738543003 Duganella sp. GV066 Isolate Unclassified
9 2738543018 Massilia sp. GV045 Isolate Unclassified
10 2738543026 Duganella sp. GV089 Isolate Unclassified
11 2738543029 Duganella sp. GV039 Isolate Unclassified
12 2738543030 Massilia sp. GV097 Isolate Unclassified
13 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
14 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
15 2842711865 Duganella sp. R-73148 Isolate Unclassified
16 2849560528 Caulobacter zeae 410 Isolate Unclassified
17 2857553236 Duganella sp. R-74557 Isolate Unclassified
18 2857558681 Duganella sp. R-74565 Isolate Unclassified
19 2857564685 Duganella sp. R-74599 Isolate Unclassified
20 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
21 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
22 2904424332 Duganella sp. 1411 Isolate Rhizosphere
23 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
24 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
25 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
26 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
27 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
28 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
32 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
33 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
34 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
35 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
36 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
90 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
91 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
105 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
106 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
107 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
108 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
115 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
124 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
125 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
133 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
139 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
144 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
148 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
151 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
161 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
164 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
165 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
166 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
167 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
170 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
171 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
172 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
173 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
174 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
175 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
176 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
177 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
178 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
179 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
180 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
181 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
190 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
191 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
192 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
193 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
194 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
195 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
196 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
197 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
198 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
199 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
200 3300053127 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 endosphere Metagenome Endosphere
201 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
202 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
203 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.96
Metatranscriptomes 0
Isolates 8.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.74
Nodule 1.4
Rhizoplane 7.69
Rhizosphere 68.88
Stem 0
Stem Tuber 0
Unclassified 13.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10005145 3300002067 Bacteria 4352
2 JGI25154J39366_1000305 3300002738 Bacteria 28812
3 JGI25152J39213_1002114 3300002773 Bacteria 7788
4 JGI25153J46596_10001040 3300003215 Bacteria 16927
5 JGI25153J46596_10028417 3300003215 Bacteria 1939
6 rootH1_10048940 3300003316 Bacteria 2504
7 rootL2_10093568 3300003322 Bacteria 4499
8 rootH1_10206436 3300003323 Bacteria 1923
9 Ga0055529_1000190 3300003763 Bacteria 84003
10 Ga0055526_1000035 3300003771 Bacteria 135873
11 Ga0055526_1000047 3300003771 Bacteria 120080
12 Ga0055526_1001248 3300003771 Bacteria 18239
13 Ga0055524_1000053 3300003775 Bacteria 144892
14 Ga0070683_100164908 3300005329 Bacteria 2102
15 Ga0068869_100200221 3300005334 Bacteria 1574
16 Ga0070691_10267551 3300005341 Bacteria 923
17 Ga0070661_100008244 3300005344 Bacteria 7192
18 Ga0070707_100143081 3300005468 Bacteria 2327
19 Ga0070684_100201412 3300005535 Bacteria 1813
20 Ga0068853_100000080 3300005539 Bacteria 66513
21 Ga0068855_100001109 3300005563 Bacteria 33489
22 Ga0068855_100006929 3300005563 Bacteria 13746
23 Ga0068857_100500724 3300005577 Bacteria 1140
24 Ga0068852_100000225 3300005616 Bacteria 38260
25 Ga0068852_100000287 3300005616 Bacteria 33809
26 Ga0075366_10025932 3300006195 Bacteria 3429
27 Ga0099826_10000006 3300006948 Bacteria 432260
28 Ga0075435_100483256 3300007076 Bacteria 1070
29 Ga0105251_10000730 3300009011 Bacteria 30157
30 Ga0105244_10002881 3300009036 Bacteria 12723
31 Ga0105244_10012867 3300009036 Bacteria 4925
32 Ga0105240_10001982 3300009093 Bacteria 33815
33 Ga0105240_10197774 3300009093 Bacteria 2358
34 Ga0105247_10074604 3300009101 Bacteria 2128
35 Ga0105247_10252536 3300009101 Bacteria 1206
36 Ga0105241_10000287 3300009174 Bacteria 37524
37 Ga0105237_10084996 3300009545 Bacteria 3154
38 Ga0105238_10000716 3300009551 Bacteria 34688
39 Ga0105249_10252385 3300009553 Bacteria 1749
40 Ga0105239_10002150 3300010375 Bacteria 25365
41 Ga0157373_10130551 3300013100 Bacteria 1767
42 Ga0157370_10001105 3300013104 Bacteria 33807
43 Ga0157369_10001102 3300013105 Bacteria 33815
44 Ga0157369_10002503 3300013105 Bacteria 21992
45 Ga0157369_10127319 3300013105 Bacteria 2699
46 Ga0157372_10000816 3300013307 Bacteria 33749
47 Ga0157372_10002569 3300013307 Bacteria 19681
48 Ga0157375_10232735 3300013308 Bacteria 2001
49 Ga0163163_10027473 3300014325 Bacteria 5451
50 Ga0213872_10000524 3300021361 Bacteria 29991
51 Ga0213872_10018251 3300021361 Bacteria 3235
52 Ga0209437_102709 3300025233 Bacteria 3352
53 Ga0207425_1000382 3300025245 Bacteria 30298
54 Ga0209646_1000256 3300025246 Bacteria 52374
55 Ga0209455_1000033 3300025272 Bacteria 504606
56 Ga0209025_1004736 3300025294 Bacteria 11584
57 Ga0209564_1000028 3300025295 Bacteria 510986
58 Ga0209564_1000032 3300025295 Bacteria 464041
59 Ga0209758_1001954 3300025297 Bacteria 22274
60 Ga0209256_1000035 3300025299 Bacteria 386754
61 Ga0207655_1007493 3300025728 Bacteria 7072
62 Ga0207713_1001872 3300025735 Bacteria 15989
63 Ga0207713_1015046 3300025735 Bacteria 3987
64 Ga0207647_10073976 3300025904 Bacteria 2053
65 Ga0207707_10268616 3300025912 Bacteria 1479
66 Ga0207695_10001801 3300025913 Bacteria 33823
67 Ga0207671_10000898 3300025914 Bacteria 37631
68 Ga0207694_10000167 3300025924 Bacteria 67706
69 Ga0207687_10119702 3300025927 Bacteria 1967
70 Ga0207661_10058133 3300025944 Bacteria 3112
71 Ga0207661_10131391 3300025944 Bacteria 2145
72 Ga0207679_10164574 3300025945 Bacteria 1820
73 Ga0207667_10034742 3300025949 Bacteria 5411
74 Ga0207667_10050651 3300025949 Bacteria 4380
75 Ga0207703_10331033 3300026035 Bacteria 1397
76 Ga0207639_10000107 3300026041 Bacteria 67097
77 Ga0207676_10050754 3300026095 Bacteria 3236
78 Ga0207674_10511978 3300026116 Bacteria 1159
79 Ga0207698_10000239 3300026142 Bacteria 34266
80 Ga0209282_1000003 3300027666 Bacteria 856377
81 Ga0307515_10195724 3300028794 Bacteria 1915
82 Ga0316181_1074919 3300030744 Bacteria 2812
83 Ga0265330_10063263 3300031235 Bacteria 1608
84 Ga0265328_10006289 3300031239 Bacteria 5044
85 Ga0307408_100000319 3300031548 Bacteria 46191
86 Ga0265314_10030510 3300031711 Bacteria 3988
87 Ga0307518_10111029 3300031838 Bacteria 1953
88 Ga0307406_10000374 3300031901 Bacteria 25802
89 Ga0307414_10045441 3300032004 Bacteria 3007
90 Ga0373954_0032631 3300035118 Bacteria 2408
91 Ga0373956_0182555 3300035119 Bacteria 992
92 Ga0373957_0087402 3300035120 Bacteria 1235
93 Ga0373924_0152734 3300035410 Bacteria 1010
94 Ga0373947_0296643 3300035725 Bacteria 1077
95 Ga0373925_0100848 3300037068 Bacteria 2219
96 Ga0436361_0011914 3300039447 Bacteria 4907
97 Ga0436361_0027385 3300039447 Bacteria 26503
98 Ga0451789_0699190 3300041443 Bacteria 1434
99 Ga0451791_0029168 3300041451 Bacteria 2032
100 Ga0451793_1313194 3300041452 Bacteria 4094
101 Ga0451797_0943225 3300041453 Unclassified 2468
102 Ga0451841_0138534 3300041498 Bacteria 3134
103 Ga0451853_3762316 3300041512 Unclassified 1427
104 Ga0450906_012513 3300042145 Bacteria 1572
105 Ga0466965_0149831 3300044683 Bacteria 1219
106 Ga0466970_0000140 3300044765 Bacteria 33579
107 Ga0466970_0081351 3300044765 Bacteria 1751
108 Ga0466957_0363398 3300044842 Bacteria 984
109 Ga0495617_000023 3300046452 Bacteria 183865
110 Ga0495617_000687 3300046452 Bacteria 16955
111 Ga0495627_014638 3300046453 Bacteria 2731
112 Ga0495592_0043271 3300046454 Bacteria 3370
113 Ga0495590_0000019 3300046457 Bacteria 213272
114 Ga0495590_0000839 3300046457 Bacteria 13872
115 Ga0495629_0271407 3300046459 Bacteria 1165
116 Ga0495638_0000115 3300046460 Bacteria 129129
117 Ga0495638_0014229 3300046460 Bacteria 5385
118 Ga0495638_0101036 3300046460 Bacteria 1725
119 Ga0495638_0140955 3300046460 Bacteria 1407
120 Ga0495651_0038362 3300046462 Bacteria 3731
121 Ga0495653_0011661 3300046463 Bacteria 7173
122 Ga0495650_0000336 3300046471 Bacteria 83752
123 Ga0495650_0000708 3300046471 Bacteria 42664
124 Ga0495650_0000867 3300046471 Bacteria 36044
125 Ga0495650_0025211 3300046471 Bacteria 2792
126 Ga0495605_0000010 3300046474 Bacteria 319487
127 Ga0495585_0000304 3300046492 Bacteria 49074
128 Ga0495607_0004933 3300046501 Bacteria 9695
129 Ga0495583_0000126 3300046506 Bacteria 128985
130 Ga0495606_0000004 3300046507 Bacteria 406209
131 Ga0495606_0000165 3300046507 Bacteria 116607
132 Ga0495606_0001154 3300046507 Bacteria 37452
133 Ga0495606_0001168 3300046507 Bacteria 37031
134 Ga0495606_0015239 3300046507 Bacteria 5935
135 Ga0495606_0022685 3300046507 Bacteria 4563
136 Ga0495606_0284665 3300046507 Bacteria 902
137 Ga0495610_0000007 3300046512 Bacteria 820919
138 Ga0495610_0004921 3300046512 Bacteria 9699
139 Ga0495610_0010556 3300046512 Bacteria 5727
140 Ga0495610_0013488 3300046512 Bacteria 4854
141 Ga0495610_0023827 3300046512 Bacteria 3318
142 Ga0495610_0044268 3300046512 Bacteria 2210
143 Ga0495620_0029256 3300046515 Bacteria 2552
144 Ga0495628_0021530 3300046516 Bacteria 5300
145 Ga0495643_0000264 3300046522 Bacteria 76021
146 Ga0495643_0000736 3300046522 Bacteria 37311
147 Ga0495648_0000004 3300046524 Bacteria 373639
148 Ga0495648_0021759 3300046524 Bacteria 4434
149 Ga0495642_0001783 3300046528 Bacteria 9289
150 Ga0495652_0005888 3300046529 Bacteria 11464
151 Ga0495652_0225648 3300046529 Bacteria 1404
152 Ga0495654_0003881 3300046530 Bacteria 9036
153 Ga0495654_0006212 3300046530 Bacteria 6810
154 Ga0495586_0091902 3300046535 Bacteria 1677
155 Ga0495587_0001934 3300046536 Bacteria 13787
156 Ga0495587_0123120 3300046536 Bacteria 1485
157 Ga0495609_0010586 3300046538 Bacteria 4419
158 Ga0495609_0026903 3300046538 Bacteria 2630
159 Ga0495597_0000046 3300046542 Bacteria 104533
160 Ga0495597_0000143 3300046542 Bacteria 63995
161 Ga0495597_0007756 3300046542 Bacteria 5423
162 Ga0495645_0245771 3300046543 Bacteria 1191
163 Ga0495622_0000011 3300046557 Bacteria 201507
164 Ga0495622_0000142 3300046557 Bacteria 61706
165 Ga0495633_0000065 3300046558 Bacteria 139197
166 Ga0495633_0000146 3300046558 Bacteria 94353
167 Ga0495633_0001622 3300046558 Bacteria 16976
168 Ga0495633_0097667 3300046558 Bacteria 1364
169 Ga0495667_0008460 3300046559 Bacteria 6984
170 Ga0495668_0000117 3300046616 Bacteria 122379
171 Ga0495668_0000781 3300046616 Bacteria 37017
172 Ga0495668_0000905 3300046616 Bacteria 33253
173 Ga0495625_0000345 3300046660 Bacteria 70957
174 Ga0495625_0000369 3300046660 Bacteria 68884
175 Ga0495625_0015198 3300046660 Bacteria 6107
176 Ga0495625_0018861 3300046660 Bacteria 5371
177 Ga0495635_0212009 3300046663 Bacteria 1311
178 Ga0495659_0000071 3300046664 Bacteria 43110
179 Ga0495661_0014300 3300046665 Bacteria 5319
180 Ga0495599_0002047 3300046678 Bacteria 11675
181 Ga0495646_0010098 3300046680 Bacteria 6004
182 Ga0495647_0051125 3300046681 Bacteria 1606
183 Ga0495624_0133559 3300046690 Bacteria 1521
184 Ga0495671_0000009 3300046692 Bacteria 369875
185 Ga0495671_0000053 3300046692 Bacteria 129715
186 Ga0495671_0002887 3300046692 Bacteria 10740
187 Ga0495671_0019035 3300046692 Bacteria 3635
188 Ga0495671_0086779 3300046692 Bacteria 1533
189 Ga0495649_0004660 3300046694 Bacteria 8909
190 Ga0495649_0022960 3300046694 Bacteria 3487
191 Ga0495660_0000894 3300046810 Bacteria 22038
192 Ga0495660_0001062 3300046810 Bacteria 19864
193 Ga0495660_0004778 3300046810 Bacteria 8183
194 Ga0495660_0008591 3300046810 Bacteria 5977
195 Ga0495604_0104790 3300047317 Bacteria 2071
196 Ga0495674_0158976 3300047319 Bacteria 1891
197 Ga0495674_0184016 3300047319 Bacteria 1738
198 Ga0495672_0000099 3300047320 Bacteria 140634
199 Ga0495672_0002665 3300047320 Bacteria 16108
200 Ga0495672_0007019 3300047320 Bacteria 8552
201 Ga0495680_0055184 3300047322 Bacteria 3083
202 Ga0495680_0119533 3300047322 Bacteria 1946
203 Ga0495683_0002587 3300047323 Bacteria 10867
204 Ga0495683_0006186 3300047323 Bacteria 6556
205 Ga0495687_000742 3300047443 Bacteria 35424
206 Ga0495687_001012 3300047443 Bacteria 28084
207 Ga0495675_0118241 3300047444 Bacteria 1651
208 Ga0495679_008212 3300047446 Bacteria 4264
209 Ga0495673_0000031 3300047469 Bacteria 447868
210 Ga0495673_0000032 3300047469 Bacteria 375856
211 Ga0495673_0000105 3300047469 Bacteria 170731
212 Ga0495684_0034009 3300047471 Bacteria 3911
213 Ga0495686_0003911 3300047472 Bacteria 12562
214 Ga0495686_0006093 3300047472 Bacteria 9340
215 Ga0495593_0086081 3300047673 Bacteria 1621
216 Ga0495602_0154917 3300048088 Bacteria 1795
217 Ga0496100_0077136 3300048903 Bacteria 2239
218 Ga0496101_0001181 3300048904 Bacteria 15657
219 Ga0496102_0058110 3300048905 Bacteria 3533
220 Ga0496103_0003237 3300048906 Bacteria 9990
221 Ga0496103_0008141 3300048906 Bacteria 6224
222 Ga0496104_0021563 3300048907 Bacteria 5916
223 Ga0496105_0122052 3300048908 Bacteria 2148
224 Ga0496106_0000195 3300048909 Bacteria 42735
225 Ga0496106_0001408 3300048909 Bacteria 18043
226 Ga0496108_0349129 3300048911 Bacteria 1291
227 Ga0496109_0008896 3300048912 Bacteria 8554
228 Ga0496109_0040423 3300048912 Bacteria 4224
229 Ga0496110_0018512 3300048913 Bacteria 5840
230 Ga0496110_0109545 3300048913 Bacteria 2480
231 Ga0496112_0089499 3300048915 Bacteria 3046
232 Ga0496113_0257661 3300048916 Bacteria 1393
233 Ga0496114_0259423 3300048917 Bacteria 1530
234 Ga0496114_0320873 3300048917 Bacteria 1369
235 Ga0496116_0011667 3300048919 Bacteria 7245
236 Ga0496117_0060049 3300048920 Bacteria 2623
237 Ga0496119_0097123 3300048922 Bacteria 1661
238 Ga0496121_0010556 3300048924 Bacteria 10389
239 Ga0496122_0096537 3300048925 Bacteria 1992
240 Ga0496123_0042311 3300048926 Bacteria 3145
241 Ga0496123_0107109 3300048926 Bacteria 1609
242 Ga0496124_0037810 3300048927 Bacteria 4195
243 Ga0496124_0082446 3300048927 Bacteria 2640
244 Ga0496124_0185128 3300048927 Bacteria 1598
245 Ga0496125_0042655 3300048928 Bacteria 3861
246 Ga0496126_0036207 3300048929 Bacteria 4616
247 Ga0495678_000001 3300049459 Bacteria 1060340
248 Ga0495678_000658 3300049459 Bacteria 31700
249 Ga0495678_005825 3300049459 Bacteria 6682
250 Ga0501249_001986 3300049679 Bacteria 4165
251 Ga0501269_000020 3300049766 Bacteria 54011
252 Ga0495612_0098321 3300053078 Bacteria 1244
253 Ga0495595_0060586 3300053084 Bacteria 1771
254 Ga0495595_0186793 3300053084 Bacteria 1029
255 Ga0495619_0019654 3300053085 Bacteria 4296
256 Ga0500641_0002039 3300053096 Bacteria 7179
257 Ga0500595_001718 3300053119 Bacteria 11430
258 Ga0500618_000324 3300053125 Bacteria 35035
259 Ga0500623_046278 3300053127 Bacteria 2206
260 Ga0500574_000739 3300053141 Bacteria 4345
261 Ga0500586_003127 3300053145 Bacteria 3863
262 Ga0500586_004225 3300053145 Bacteria 3487
263 Ga0500622_0000313 3300053156 Bacteria 49365

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042145 Ga0450906_012513 Ga0450906_012513_272_1117 214
2 3300048906 Ga0496103_0003237 Ga0496103_0003237_2876_3640 226
3 3300044765 Ga0466970_0081351 Ga0466970_0081351_891_1643 229
4 3300041512 Ga0451853_3762316 Ga0451853_3762316_192_887 231
5 3300048917 Ga0496114_0259423 Ga0496114_0259423_58_834 231
6 3300009101 Ga0105247_10252536 Ga0105247_102525361 232
7 3300046515 Ga0495620_0029256 Ga0495620_0029256_492_1190 232
8 3300031548 Ga0307408_100000319 Ga0307408_1000003195 236
9 3300031901 Ga0307406_10000374 Ga0307406_1000037426 236
10 3300025949 Ga0207667_10050651 Ga0207667_100506515 238
11 iso_pu_bacteria 2904424332 2904429414 239
12 3300044683 Ga0466965_0149831 Ga0466965_0149831_249_1001 241
13 3300044765 Ga0466970_0000140 Ga0466970_0000140_3202_3957 241
14 3300044842 Ga0466957_0363398 Ga0466957_0363398_12_767 241
15 3300048909 Ga0496106_0000195 Ga0496106_0000195_7891_8649 241
16 3300046681 Ga0495647_0051125 Ga0495647_0051125_613_1377 244
17 3300046558 Ga0495633_0097667 Ga0495633_0097667_264_1040 245
18 iso_pu_bacteria 2721755702 2723643391 246
19 iso_pu_bacteria 2935409751 2935411837 246
20 iso_pu_bacteria 2643221645 2644249902 247
21 iso_pu_bacteria 2643221664 2644358573 247
22 iso_pu_bacteria 2738541280 2738739499 247
23 iso_pu_bacteria 2738541297 2738827622 247
24 iso_pu_bacteria 2738541300 2738846075 247
25 iso_pu_bacteria 2738541357 2739151418 247
26 iso_pu_bacteria 2738543003 2739193338 247
27 iso_pu_bacteria 2738543018 2739275772 247
28 iso_pu_bacteria 2738543026 2739319814 247
29 iso_pu_bacteria 2738543029 2739338055 247
30 iso_pu_bacteria 2738543030 2739344816 247
31 iso_pu_bacteria 2842348783 2842355114 247
32 iso_pu_bacteria 2842454564 2842460327 247
33 iso_pu_bacteria 2842711865 2842713041 247
34 iso_pu_bacteria 2849560528 2849563648 247
35 iso_pu_bacteria 2857553236 2857555596 247
36 iso_pu_bacteria 2857558681 2857563003 247
37 iso_pu_bacteria 2857564685 2857569242 247
38 iso_pu_bacteria 2898329390 2898334235 247
39 iso_pu_bacteria 2900634093 2900641178 247
40 3300046557 Ga0495622_0000011 Ga0495622_0000011_148260_149036 248
41 3300046810 Ga0495660_0008591 Ga0495660_0008591_1044_1883 250
42 3300002067 JGI24735J21928_10005145 JGI24735J21928_100051453 251
43 3300002738 JGI25154J39366_1000305 JGI25154J39366_10003059 251
44 3300002773 JGI25152J39213_1002114 JGI25152J39213_10021145 251
45 3300003215 JGI25153J46596_10001040 JGI25153J46596_100010405 251
46 3300003215 JGI25153J46596_10028417 JGI25153J46596_100284172 251
47 3300003316 rootH1_10048940 rootH1_100489401 251
48 3300003322 rootL2_10093568 rootL2_100935684 251
49 3300003323 rootH1_10206436 rootH1_102064362 251
50 3300003763 Ga0055529_1000190 Ga0055529_100019043 251
51 3300003771 Ga0055526_1000035 Ga0055526_100003521 251
52 3300003771 Ga0055526_1000047 Ga0055526_100004789 251
53 3300003771 Ga0055526_1001248 Ga0055526_100124820 251
54 3300003775 Ga0055524_1000053 Ga0055524_100005385 251
55 3300005329 Ga0070683_100164908 Ga0070683_1001649082 251
56 3300005334 Ga0068869_100200221 Ga0068869_1002002212 251
57 3300005341 Ga0070691_10267551 Ga0070691_102675512 251
58 3300005344 Ga0070661_100008244 Ga0070661_1000082446 251
59 3300005468 Ga0070707_100143081 Ga0070707_1001430812 251
60 3300005535 Ga0070684_100201412 Ga0070684_1002014122 251
61 3300005539 Ga0068853_100000080 Ga0068853_10000008031 251
62 3300005563 Ga0068855_100001109 Ga0068855_1000011093 251
63 3300005563 Ga0068855_100006929 Ga0068855_1000069294 251
64 3300005577 Ga0068857_100500724 Ga0068857_1005007242 251
65 3300005616 Ga0068852_100000225 Ga0068852_10000022530 251
66 3300005616 Ga0068852_100000287 Ga0068852_10000028729 251
67 3300006195 Ga0075366_10025932 Ga0075366_100259324 251
68 3300006948 Ga0099826_10000006 Ga0099826_10000006125 251
69 3300007076 Ga0075435_100483256 Ga0075435_1004832561 251
70 3300009011 Ga0105251_10000730 Ga0105251_1000073025 251
71 3300009036 Ga0105244_10002881 Ga0105244_100028817 251
72 3300009036 Ga0105244_10012867 Ga0105244_100128671 251
73 3300009093 Ga0105240_10001982 Ga0105240_100019823 251
74 3300009093 Ga0105240_10197774 Ga0105240_101977743 251
75 3300009101 Ga0105247_10074604 Ga0105247_100746043 251
76 3300009174 Ga0105241_10000287 Ga0105241_100002876 251
77 3300009545 Ga0105237_10084996 Ga0105237_100849962 251
78 3300009551 Ga0105238_10000716 Ga0105238_1000071629 251
79 3300009553 Ga0105249_10252385 Ga0105249_102523853 251
80 3300010375 Ga0105239_10002150 Ga0105239_100021506 251
81 3300013100 Ga0157373_10130551 Ga0157373_101305512 251
82 3300013104 Ga0157370_10001105 Ga0157370_100011053 251
83 3300013105 Ga0157369_10001102 Ga0157369_100011023 251
84 3300013105 Ga0157369_10002503 Ga0157369_100025036 251
85 3300013105 Ga0157369_10127319 Ga0157369_101273192 251
86 3300013307 Ga0157372_10000816 Ga0157372_100008163 251
87 3300013307 Ga0157372_10002569 Ga0157372_100025693 251
88 3300013308 Ga0157375_10232735 Ga0157375_102327352 251
89 3300014325 Ga0163163_10027473 Ga0163163_100274736 251
90 3300021361 Ga0213872_10000524 Ga0213872_1000052421 251
91 3300021361 Ga0213872_10018251 Ga0213872_100182513 251
92 3300025233 Ga0209437_102709 Ga0209437_1027092 251
93 3300025245 Ga0207425_1000382 Ga0207425_100038214 251
94 3300025246 Ga0209646_1000256 Ga0209646_100025633 251
95 3300025272 Ga0209455_1000033 Ga0209455_1000033131 251
96 3300025294 Ga0209025_1004736 Ga0209025_10047363 251
97 3300025295 Ga0209564_1000028 Ga0209564_1000028164 251
98 3300025295 Ga0209564_1000032 Ga0209564_1000032297 251
99 3300025297 Ga0209758_1001954 Ga0209758_100195415 251
100 3300025299 Ga0209256_1000035 Ga0209256_1000035281 251
101 3300025728 Ga0207655_1007493 Ga0207655_10074938 251
102 3300025735 Ga0207713_1001872 Ga0207713_100187212 251
103 3300025735 Ga0207713_1015046 Ga0207713_10150462 251
104 3300025904 Ga0207647_10073976 Ga0207647_100739761 251
105 3300025912 Ga0207707_10268616 Ga0207707_102686162 251
106 3300025913 Ga0207695_10001801 Ga0207695_1000180128 251
107 3300025914 Ga0207671_10000898 Ga0207671_1000089830 251
108 3300025924 Ga0207694_10000167 Ga0207694_1000016731 251
109 3300025927 Ga0207687_10119702 Ga0207687_101197022 251
110 3300025944 Ga0207661_10058133 Ga0207661_100581332 251
111 3300025944 Ga0207661_10131391 Ga0207661_101313912 251
112 3300025945 Ga0207679_10164574 Ga0207679_101645742 251
113 3300025949 Ga0207667_10034742 Ga0207667_100347426 251
114 3300026035 Ga0207703_10331033 Ga0207703_103310332 251
115 3300026041 Ga0207639_10000107 Ga0207639_1000010730 251
116 3300026095 Ga0207676_10050754 Ga0207676_100507544 251
117 3300026116 Ga0207674_10511978 Ga0207674_105119782 251
118 3300026142 Ga0207698_10000239 Ga0207698_1000023928 251
119 3300027666 Ga0209282_1000003 Ga0209282_1000003247 251
120 3300028794 Ga0307515_10195724 Ga0307515_101957242 251
121 3300030744 Ga0316181_1074919 Ga0316181_10749192 251
122 3300031235 Ga0265330_10063263 Ga0265330_100632632 251
123 3300031239 Ga0265328_10006289 Ga0265328_100062893 251
124 3300031711 Ga0265314_10030510 Ga0265314_100305104 251
125 3300031838 Ga0307518_10111029 Ga0307518_101110291 251
126 3300032004 Ga0307414_10045441 Ga0307414_100454412 251
127 3300035118 Ga0373954_0032631 Ga0373954_0032631_1345_2109 251
128 3300035119 Ga0373956_0182555 Ga0373956_0182555_99_863 251
129 3300035120 Ga0373957_0087402 Ga0373957_0087402_255_1019 251
130 3300035410 Ga0373924_0152734 Ga0373924_0152734_37_801 251
131 3300035725 Ga0373947_0296643 Ga0373947_0296643_256_1023 251
132 3300037068 Ga0373925_0100848 Ga0373925_0100848_1337_2104 251
133 3300039447 Ga0436361_0011914 Ga0436361_0011914_775_1545 251
134 3300039447 Ga0436361_0027385 Ga0436361_0027385_2404_3210 251
135 3300041443 Ga0451789_0699190 Ga0451789_0699190_59_820 251
136 3300041451 Ga0451791_0029168 Ga0451791_0029168_437_1198 251
137 3300041452 Ga0451793_1313194 Ga0451793_1313194_1029_1790 251
138 3300041453 Ga0451797_0943225 Ga0451797_0943225_993_1754 251
139 3300041498 Ga0451841_0138534 Ga0451841_0138534_1713_2474 251
140 3300046452 Ga0495617_000023 Ga0495617_000023_46686_47477 251
141 3300046452 Ga0495617_000687 Ga0495617_000687_12202_12969 251
142 3300046453 Ga0495627_014638 Ga0495627_014638_522_1277 251
143 3300046454 Ga0495592_0043271 Ga0495592_0043271_1847_2611 251
144 3300046457 Ga0495590_0000019 Ga0495590_0000019_42039_42818 251
145 3300046457 Ga0495590_0000839 Ga0495590_0000839_4087_4842 251
146 3300046459 Ga0495629_0271407 Ga0495629_0271407_65_829 251
147 3300046460 Ga0495638_0000115 Ga0495638_0000115_97560_98369 251
148 3300046460 Ga0495638_0014229 Ga0495638_0014229_2721_3548 251
149 3300046460 Ga0495638_0101036 Ga0495638_0101036_81_932 251
150 3300046460 Ga0495638_0140955 Ga0495638_0140955_508_1284 251
151 3300046462 Ga0495651_0038362 Ga0495651_0038362_1085_1849 251
152 3300046463 Ga0495653_0011661 Ga0495653_0011661_2562_3326 251
153 3300046471 Ga0495650_0000336 Ga0495650_0000336_35720_36511 251
154 3300046471 Ga0495650_0000708 Ga0495650_0000708_37688_38467 251
155 3300046471 Ga0495650_0000867 Ga0495650_0000867_4543_5352 251
156 3300046471 Ga0495650_0025211 Ga0495650_0025211_672_1499 251
157 3300046474 Ga0495605_0000010 Ga0495605_0000010_130660_131415 251
158 3300046492 Ga0495585_0000304 Ga0495585_0000304_11507_12358 251
159 3300046501 Ga0495607_0004933 Ga0495607_0004933_4492_5271 251
160 3300046506 Ga0495583_0000126 Ga0495583_0000126_97417_98226 251
161 3300046507 Ga0495606_0000004 Ga0495606_0000004_198796_199587 251
162 3300046507 Ga0495606_0000165 Ga0495606_0000165_95476_96315 251
163 3300046507 Ga0495606_0001154 Ga0495606_0001154_27381_28148 251
164 3300046507 Ga0495606_0001168 Ga0495606_0001168_32179_32952 251
165 3300046507 Ga0495606_0015239 Ga0495606_0015239_864_1643 251
166 3300046507 Ga0495606_0022685 Ga0495606_0022685_493_1260 251
167 3300046507 Ga0495606_0284665 Ga0495606_0284665_72_851 251
168 3300046512 Ga0495610_0000007 Ga0495610_0000007_449924_450775 251
169 3300046512 Ga0495610_0004921 Ga0495610_0004921_5074_5850 251
170 3300046512 Ga0495610_0010556 Ga0495610_0010556_3672_4448 251
171 3300046512 Ga0495610_0013488 Ga0495610_0013488_2283_3050 251
172 3300046512 Ga0495610_0023827 Ga0495610_0023827_1268_2044 251
173 3300046512 Ga0495610_0044268 Ga0495610_0044268_1271_2062 251
174 3300046516 Ga0495628_0021530 Ga0495628_0021530_1807_2571 251
175 3300046522 Ga0495643_0000264 Ga0495643_0000264_36977_37753 251
176 3300046522 Ga0495643_0000736 Ga0495643_0000736_5016_5825 251
177 3300046524 Ga0495648_0000004 Ga0495648_0000004_36704_37513 251
178 3300046524 Ga0495648_0021759 Ga0495648_0021759_1067_1918 251
179 3300046528 Ga0495642_0001783 Ga0495642_0001783_4556_5365 251
180 3300046529 Ga0495652_0005888 Ga0495652_0005888_7249_8085 251
181 3300046529 Ga0495652_0225648 Ga0495652_0225648_477_1313 251
182 3300046530 Ga0495654_0003881 Ga0495654_0003881_5745_6596 251
183 3300046530 Ga0495654_0006212 Ga0495654_0006212_1463_2221 251
184 3300046535 Ga0495586_0091902 Ga0495586_0091902_686_1450 251
185 3300046536 Ga0495587_0001934 Ga0495587_0001934_7822_8586 251
186 3300046536 Ga0495587_0123120 Ga0495587_0123120_289_1056 251
187 3300046538 Ga0495609_0010586 Ga0495609_0010586_3637_4395 251
188 3300046538 Ga0495609_0026903 Ga0495609_0026903_1363_2172 251
189 3300046542 Ga0495597_0000046 Ga0495597_0000046_70682_71452 251
190 3300046542 Ga0495597_0000143 Ga0495597_0000143_31740_32549 251
191 3300046542 Ga0495597_0007756 Ga0495597_0007756_2850_3608 251
192 3300046543 Ga0495645_0245771 Ga0495645_0245771_232_996 251
193 3300046557 Ga0495622_0000142 Ga0495622_0000142_30129_30938 251
194 3300046558 Ga0495633_0000065 Ga0495633_0000065_46757_47530 251
195 3300046558 Ga0495633_0000146 Ga0495633_0000146_4402_5211 251
196 3300046558 Ga0495633_0001622 Ga0495633_0001622_6048_6815 251
197 3300046559 Ga0495667_0008460 Ga0495667_0008460_2234_2998 251
198 3300046616 Ga0495668_0000117 Ga0495668_0000117_105997_106788 251
199 3300046616 Ga0495668_0000781 Ga0495668_0000781_5317_6108 251
200 3300046616 Ga0495668_0000905 Ga0495668_0000905_28189_28968 251
201 3300046660 Ga0495625_0000345 Ga0495625_0000345_5294_6049 251
202 3300046660 Ga0495625_0000369 Ga0495625_0000369_30753_31562 251
203 3300046660 Ga0495625_0015198 Ga0495625_0015198_96_881 251
204 3300046660 Ga0495625_0018861 Ga0495625_0018861_2160_2936 251
205 3300046663 Ga0495635_0212009 Ga0495635_0212009_164_928 251
206 3300046664 Ga0495659_0000071 Ga0495659_0000071_22036_22794 251
207 3300046665 Ga0495661_0014300 Ga0495661_0014300_1626_2417 251
208 3300046678 Ga0495599_0002047 Ga0495599_0002047_1838_2602 251
209 3300046680 Ga0495646_0010098 Ga0495646_0010098_1655_2419 251
210 3300046690 Ga0495624_0133559 Ga0495624_0133559_693_1457 251
211 3300046692 Ga0495671_0000009 Ga0495671_0000009_50930_51685 251
212 3300046692 Ga0495671_0000053 Ga0495671_0000053_92512_93270 251
213 3300046692 Ga0495671_0002887 Ga0495671_0002887_2517_3308 251
214 3300046692 Ga0495671_0019035 Ga0495671_0019035_723_1490 251
215 3300046692 Ga0495671_0086779 Ga0495671_0086779_383_1159 251
216 3300046694 Ga0495649_0004660 Ga0495649_0004660_3176_3952 251
217 3300046694 Ga0495649_0022960 Ga0495649_0022960_2521_3288 251
218 3300046810 Ga0495660_0000894 Ga0495660_0000894_18804_19562 251
219 3300046810 Ga0495660_0001062 Ga0495660_0001062_55_834 251
220 3300046810 Ga0495660_0004778 Ga0495660_0004778_3268_4059 251
221 3300047317 Ga0495604_0104790 Ga0495604_0104790_1132_1896 251
222 3300047319 Ga0495674_0158976 Ga0495674_0158976_326_1093 251
223 3300047319 Ga0495674_0184016 Ga0495674_0184016_549_1313 251
224 3300047320 Ga0495672_0000099 Ga0495672_0000099_63726_64502 251
225 3300047320 Ga0495672_0002665 Ga0495672_0002665_5628_6386 251
226 3300047320 Ga0495672_0007019 Ga0495672_0007019_7709_8464 251
227 3300047322 Ga0495680_0055184 Ga0495680_0055184_2096_2863 251
228 3300047322 Ga0495680_0119533 Ga0495680_0119533_385_1149 251
229 3300047323 Ga0495683_0002587 Ga0495683_0002587_10056_10847 251
230 3300047323 Ga0495683_0006186 Ga0495683_0006186_1504_2259 251
231 3300047443 Ga0495687_000742 Ga0495687_000742_5686_6495 251
232 3300047443 Ga0495687_001012 Ga0495687_001012_4597_5376 251
233 3300047444 Ga0495675_0118241 Ga0495675_0118241_443_1207 251
234 3300047446 Ga0495679_008212 Ga0495679_008212_2323_3174 251
235 3300047469 Ga0495673_0000031 Ga0495673_0000031_230393_231244 251
236 3300047469 Ga0495673_0000032 Ga0495673_0000032_242964_243815 251
237 3300047469 Ga0495673_0000105 Ga0495673_0000105_74913_75680 251
238 3300047471 Ga0495684_0034009 Ga0495684_0034009_1315_2079 251
239 3300047472 Ga0495686_0003911 Ga0495686_0003911_3231_4022 251
240 3300047472 Ga0495686_0006093 Ga0495686_0006093_6300_7058 251
241 3300047673 Ga0495593_0086081 Ga0495593_0086081_553_1317 251
242 3300048088 Ga0495602_0154917 Ga0495602_0154917_272_1036 251
243 3300048903 Ga0496100_0077136 Ga0496100_0077136_1131_1886 251
244 3300048904 Ga0496101_0001181 Ga0496101_0001181_5632_6387 251
245 3300048905 Ga0496102_0058110 Ga0496102_0058110_2354_3109 251
246 3300048906 Ga0496103_0008141 Ga0496103_0008141_2646_3401 251
247 3300048907 Ga0496104_0021563 Ga0496104_0021563_552_1316 251
248 3300048908 Ga0496105_0122052 Ga0496105_0122052_752_1516 251
249 3300048909 Ga0496106_0001408 Ga0496106_0001408_11567_12322 251
250 3300048911 Ga0496108_0349129 Ga0496108_0349129_323_1078 251
251 3300048912 Ga0496109_0008896 Ga0496109_0008896_7024_7788 251
252 3300048912 Ga0496109_0040423 Ga0496109_0040423_1383_2138 251
253 3300048913 Ga0496110_0018512 Ga0496110_0018512_4847_5611 251
254 3300048913 Ga0496110_0109545 Ga0496110_0109545_1110_1865 251
255 3300048915 Ga0496112_0089499 Ga0496112_0089499_328_1083 251
256 3300048916 Ga0496113_0257661 Ga0496113_0257661_368_1123 251
257 3300048917 Ga0496114_0320873 Ga0496114_0320873_533_1297 251
258 3300048919 Ga0496116_0011667 Ga0496116_0011667_1381_2136 251
259 3300048920 Ga0496117_0060049 Ga0496117_0060049_993_1748 251
260 3300048922 Ga0496119_0097123 Ga0496119_0097123_591_1346 251
261 3300048924 Ga0496121_0010556 Ga0496121_0010556_4668_5423 251
262 3300048925 Ga0496122_0096537 Ga0496122_0096537_339_1094 251
263 3300048926 Ga0496123_0042311 Ga0496123_0042311_1956_2711 251
264 3300048926 Ga0496123_0107109 Ga0496123_0107109_24_815 251
265 3300048927 Ga0496124_0037810 Ga0496124_0037810_3346_4179 251
266 3300048927 Ga0496124_0082446 Ga0496124_0082446_1657_2412 251
267 3300048927 Ga0496124_0185128 Ga0496124_0185128_149_925 251
268 3300048928 Ga0496125_0042655 Ga0496125_0042655_461_1216 251
269 3300048929 Ga0496126_0036207 Ga0496126_0036207_2448_3299 251
270 3300049459 Ga0495678_000001 Ga0495678_000001_541474_542250 251
271 3300049459 Ga0495678_000658 Ga0495678_000658_5518_6294 251
272 3300049459 Ga0495678_005825 Ga0495678_005825_5673_6482 251
273 3300049679 Ga0501249_001986 Ga0501249_001986_1700_2476 251
274 3300049766 Ga0501269_000020 Ga0501269_000020_25382_26158 251
275 3300053078 Ga0495612_0098321 Ga0495612_0098321_456_1220 251
276 3300053084 Ga0495595_0060586 Ga0495595_0060586_75_839 251
277 3300053084 Ga0495595_0186793 Ga0495595_0186793_190_957 251
278 3300053085 Ga0495619_0019654 Ga0495619_0019654_2622_3386 251
279 3300053096 Ga0500641_0002039 Ga0500641_0002039_6137_6892 251
280 3300053119 Ga0500595_001718 Ga0500595_001718_4496_5251 251
281 3300053125 Ga0500618_000324 Ga0500618_000324_14880_15731 251
282 3300053127 Ga0500623_046278 Ga0500623_046278_384_1139 251
283 3300053141 Ga0500574_000739 Ga0500574_000739_2107_2862 251
284 3300053145 Ga0500586_003127 Ga0500586_003127_2537_3388 251
285 3300053145 Ga0500586_004225 Ga0500586_004225_1275_2042 251
286 3300053156 Ga0500622_0000313 Ga0500622_0000313_20147_20902 251

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00455

DeoRC

DeoR C terminal sensor domain

104

263

0.98

PF08220

HTH_DeoR

DeoR-like helix-turn-helix domain

38

93

0.96

PF08279

HTH_11

HTH domain

38

86

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7l6l-assembly1.cif.gz_E crystal structure of the dna-binding transcriptional repressor deor from escherichia coli str. k-12 0.9338 75 249
7l6l-assembly1.cif.gz_E crystal structure of the dna-binding transcriptional repressor deor from escherichia coli str. k-12 0.9139 75 249
4xrf-assembly1.cif.gz_A crystal structure of mepr like protein complexed with pseudoligands 0.9038 3 51
1s3j-assembly1.cif.gz_B x-ray crystal structure of yuso protein from bacillus subtilis 0.8961 10 52
1u2w-assembly1.cif.gz_A crystal structure of the staphylococcus aureus pi258 cadc 0.8832 4 58
ID Description Score Start End Superfamily
af_P77721_6_62_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9812 8 58 1.10.10.10
af_P0A9W0_3_58_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9734 3 57 1.10.10.10
af_P39361_78_236_3.40.50.1360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.971 74 229 3.40.50.1360
af_P0ACK2_88_247_3.40.50.1360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.968 74 230 3.40.50.1360
af_P32144_11_67_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9582 8 60 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7L9UAP3-F1-model_v4 DeoR family transcriptional regulator 0.9895 75 251
AF-A0A1N7SL79-F1-model_v4 Transcriptional regulator of sugar metabolism 0.9808 1 251 GO:0003677
GO:0003700
AF-A0A1N7SL79-F1-model_v4 Transcriptional regulator of sugar metabolism 0.9769 1 251 GO:0003677
GO:0003700
AF-A0A6L3XZ69-F1-model_v4 DeoR/GlpR transcriptional regulator 0.9749 1 219 GO:0003677
GO:0003700
AF-A0A5J4KV06-F1-model_v4 DeoR-like transcriptional repressor C-terminal sensor domain-containing protein 0.972 59 251

Feature Viewer

pLDDT pTM Quality
92.37 0.88 High
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Predicted Structure (AlphaFold2)

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