F386953

General Info

Members Datasets Scaffolds Average Seq Length
285 220 570 352

Family's Representative Sequence

Representative Sequence 3300041491|Ga0451833_1005144|Ga0451833_1005144_274_1428
Length 384
Sequence MNTQTVIRPPRQMRADRVTLAHGGGGKAMRDLIEDVFVSVFQPDGMEDQARLESALLTQPGAKLAFTTDSFVVQPLEFPGGDIGRIAVCGTVNDLAVGGAKPLWLSAAFIIEEGCEVELLRRVVASMRLAADEAGVRIVTGDTKVVERGAADRLFVTTAGVGVIPPGRTLLAGNVQAGDVAIVNGVLGDHGAAILAARGDMMFEADIMSDCQPLGALMEAVIAAAPDVRCARDATRGGLASALNEIAQASGMGIEIDEAALPLRPEVKGVCELLGLDPLYLANEGALVLFVPEAQAQAALAAMQGVEAGRNAAIIGRAVATRHARVVIWDLSLLEIEGGQPIQRVYTNAARLQALAIGQYLQSKGVHPTLEHVAQRCWERERGE

Samples

Sample ID Description Type Environment
1 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
53 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
54 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
116 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
117 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
120 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
121 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
122 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
123 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
124 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
125 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
126 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
127 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
128 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
129 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
130 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
131 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
132 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
133 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
134 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
137 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
138 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
141 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
142 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
143 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
144 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
145 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
146 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
147 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
148 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
149 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
150 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
153 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
156 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
160 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
161 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
162 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
163 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
164 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
165 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
176 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
187 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
188 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
189 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
190 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
191 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
192 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
193 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
194 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
197 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
198 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
199 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
200 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
201 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
202 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
203 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
204 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
205 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
206 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
207 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
208 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
209 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
210 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
211 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
212 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
213 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
214 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
215 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
216 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
217 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
218 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
219 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
220 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.23
Metatranscriptomes 0
Isolates 8.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.16
Nodule 5.61
Rhizoplane 0
Rhizosphere 83.86
Stem 0
Stem Tuber 0
Unclassified 1.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451833_1005144 3300041491 Bacteria 1631
2 JGI24748J21848_1000028 3300002074 Bacteria 91962
3 JGI24034J26672_10000058 3300002239 Bacteria 41887
4 Ga0065714_10002184 3300005288 Bacteria 284511
5 Ga0065704_10003133 3300005289 Bacteria 6841
6 Ga0065712_10000112 3300005290 Bacteria 340011
7 Ga0065715_10092051 3300005293 Bacteria 5362
8 Ga0065715_10093112 3300005293 Bacteria 4805
9 Ga0065715_10179253 3300005293 Bacteria 1488
10 Ga0065707_10003810 3300005295 Unclassified 4443
11 Ga0070690_100023307 3300005330 Bacteria 3796
12 Ga0068869_100295831 3300005334 Bacteria 1306
13 Ga0070666_10031039 3300005335 Bacteria 3526
14 Ga0070682_100002158 3300005337 Bacteria 10919
15 Ga0070689_100000416 3300005340 Bacteria 25090
16 Ga0070692_10007562 3300005345 Bacteria 4791
17 Ga0070669_100020783 3300005353 Bacteria 4690
18 Ga0070675_100063365 3300005354 Bacteria 3056
19 Ga0070671_100043293 3300005355 Bacteria 3741
20 Ga0070674_100009876 3300005356 Bacteria 5742
21 Ga0070673_100004028 3300005364 Bacteria 9250
22 Ga0070688_100025808 3300005365 Bacteria 3484
23 Ga0070703_10004982 3300005406 Bacteria 3705
24 Ga0070713_100064614 3300005436 Bacteria 3072
25 Ga0070710_10082998 3300005437 Bacteria 1874
26 Ga0070710_10090841 3300005437 Bacteria 1801
27 Ga0070711_100174777 3300005439 Bacteria 1640
28 Ga0070705_100033667 3300005440 Bacteria 2858
29 Ga0070705_100052170 3300005440 Bacteria 2388
30 Ga0070694_100000876 3300005444 Bacteria 16961
31 Ga0070708_100485175 3300005445 Bacteria 1166
32 Ga0070678_100038840 3300005456 Bacteria 3354
33 Ga0070685_10001656 3300005466 Bacteria 11705
34 Ga0070706_100000211 3300005467 Bacteria 71647
35 Ga0070707_100052932 3300005468 Bacteria 3892
36 Ga0070707_100426947 3300005468 Bacteria 1286
37 Ga0070698_100094740 3300005471 Bacteria 2964
38 Ga0070698_100255463 3300005471 Bacteria 1685
39 Ga0070699_100137841 3300005518 Bacteria 2153
40 Ga0070679_100062104 3300005530 Bacteria 3724
41 Ga0068853_100005525 3300005539 Bacteria 9914
42 Ga0070672_100015726 3300005543 Bacteria 5402
43 Ga0070686_100033018 3300005544 Bacteria 3177
44 Ga0070696_100152615 3300005546 Bacteria 1697
45 Ga0070665_100333201 3300005548 Bacteria 1522
46 Ga0070704_100030167 3300005549 Bacteria 3631
47 Ga0068857_100047545 3300005577 Bacteria 3809
48 Ga0068856_100039867 3300005614 Bacteria 4612
49 Ga0070702_100005431 3300005615 Bacteria 5934
50 Ga0070702_100020826 3300005615 Bacteria 3441
51 Ga0068852_100165780 3300005616 Bacteria 2067
52 Ga0068859_100091829 3300005617 Bacteria 3087
53 Ga0068859_100125349 3300005617 Bacteria 2637
54 Ga0068864_100050000 3300005618 Bacteria 3597
55 Ga0068861_100015075 3300005719 Bacteria 5440
56 Ga0068861_100039746 3300005719 Bacteria 3513
57 Ga0068863_100038498 3300005841 Bacteria 4549
58 Ga0068863_100062339 3300005841 Bacteria 3526
59 Ga0068858_100000298 3300005842 Bacteria 53388
60 Ga0068858_100071353 3300005842 Bacteria 3221
61 Ga0068858_100111840 3300005842 Bacteria 2551
62 Ga0068858_100210698 3300005842 Bacteria 1839
63 Ga0068860_100006748 3300005843 Bacteria 11513
64 Ga0068862_100016173 3300005844 Bacteria 6205
65 Ga0068862_100088225 3300005844 Bacteria 2698
66 Ga0081540_1024472 3300005983 Bacteria 3503
67 Ga0075363_100055297 3300006048 Bacteria 2126
68 Ga0070716_100022718 3300006173 Bacteria 3318
69 Ga0070712_100086387 3300006175 Bacteria 2286
70 Ga0075366_10007210 3300006195 Bacteria 6127
71 Ga0068871_100003688 3300006358 Bacteria 10523
72 Ga0075428_100001747 3300006844 Bacteria 23193
73 Ga0075433_10099229 3300006852 Bacteria 2578
74 Ga0075433_10374038 3300006852 Bacteria 1258
75 Ga0075434_100044625 3300006871 Bacteria 4397
76 Ga0075429_100174553 3300006880 Bacteria 1883
77 Ga0097620_100091824 3300006931 Bacteria 3087
78 Ga0097620_100125336 3300006931 Bacteria 2637
79 Ga0075435_100009246 3300007076 Bacteria 7119
80 Ga0105240_10001052 3300009093 Bacteria 48878
81 Ga0111539_10001541 3300009094 Bacteria 30689
82 Ga0111539_10028904 3300009094 Bacteria 6760
83 Ga0111539_10066850 3300009094 Bacteria 4246
84 Ga0105247_10000047 3300009101 Bacteria 151385
85 Ga0114129_10020741 3300009147 Bacteria 9338
86 Ga0114129_10074149 3300009147 Bacteria 4740
87 Ga0105243_10000028 3300009148 Bacteria 190789
88 Ga0105243_10011544 3300009148 Bacteria 6683
89 Ga0105241_10253542 3300009174 Bacteria 1493
90 Ga0105242_10000102 3300009176 Bacteria 60306
91 Ga0105242_10033755 3300009176 Bacteria 4099
92 Ga0105249_10014961 3300009553 Bacteria 6862
93 Ga0157378_10101099 3300013297 Bacteria 2633
94 Ga0157378_10124542 3300013297 Bacteria 2380
95 Ga0163162_10109760 3300013306 Bacteria 2856
96 Ga0157375_10054038 3300013308 Bacteria 3954
97 Ga0157375_10466052 3300013308 Bacteria 1429
98 Ga0163163_10051473 3300014325 Bacteria 4061
99 Ga0163163_10078782 3300014325 Bacteria 3292
100 Ga0157380_10002570 3300014326 Bacteria 12264
101 Ga0157380_10043272 3300014326 Bacteria 3525
102 Ga0157377_10054730 3300014745 Bacteria 2260
103 Ga0163161_10016130 3300017792 Bacteria 5215
104 Ga0213876_10000184 3300021384 Bacteria 64563
105 Ga0207672_1000194 3300025223 Bacteria 8523
106 Ga0207697_10007953 3300025315 Bacteria 4685
107 Ga0207653_10000047 3300025885 Bacteria 91340
108 Ga0207692_10039149 3300025898 Bacteria 2330
109 Ga0207710_10000001 3300025900 Bacteria 1797433
110 Ga0207647_10007570 3300025904 Bacteria 7833
111 Ga0207647_10087299 3300025904 Bacteria 1863
112 Ga0207643_10030504 3300025908 Bacteria 3001
113 Ga0207684_10000450 3300025910 Bacteria 54199
114 Ga0207695_10000960 3300025913 Bacteria 51384
115 Ga0207693_10042289 3300025915 Bacteria 3587
116 Ga0207693_10094804 3300025915 Bacteria 2339
117 Ga0207663_10037577 3300025916 Bacteria 2920
118 Ga0207662_10002706 3300025918 Bacteria 8944
119 Ga0207662_10123723 3300025918 Bacteria 1624
120 Ga0207646_10063921 3300025922 Bacteria 3285
121 Ga0207659_10206365 3300025926 Bacteria 1572
122 Ga0207700_10008825 3300025928 Bacteria 6264
123 Ga0207644_10000207 3300025931 Bacteria 40948
124 Ga0207686_10000019 3300025934 Bacteria 187616
125 Ga0207686_10000278 3300025934 Bacteria 38127
126 Ga0207709_10000064 3300025935 Bacteria 191119
127 Ga0207670_10000123 3300025936 Bacteria 51150
128 Ga0207670_10216859 3300025936 Bacteria 1462
129 Ga0207691_10002057 3300025940 Bacteria 19664
130 Ga0207711_10126901 3300025941 Bacteria 2283
131 Ga0207651_10003700 3300025960 Bacteria 7563
132 Ga0207712_10076918 3300025961 Bacteria 2417
133 Ga0207703_10001434 3300026035 Bacteria 21777
134 Ga0207703_10187163 3300026035 Bacteria 1831
135 Ga0207708_10059286 3300026075 Bacteria 2922
136 Ga0207702_10415481 3300026078 Bacteria 1300
137 Ga0207648_10190302 3300026089 Bacteria 1818
138 Ga0207676_10023658 3300026095 Bacteria 4536
139 Ga0207675_100001348 3300026118 Bacteria 24637
140 Ga0207675_100025975 3300026118 Bacteria 5450
141 Ga0207675_100099807 3300026118 Bacteria 2734
142 Ga0207683_10057698 3300026121 Bacteria 3408
143 Ga0207698_10151788 3300026142 Bacteria 2012
144 Ga0207698_10245754 3300026142 Unclassified 1634
145 Ga0207428_10001808 3300027907 Bacteria 21907
146 Ga0207428_10003461 3300027907 Bacteria 15324
147 Ga0268266_10305111 3300028379 Bacteria 1486
148 Ga0268265_10024322 3300028380 Bacteria 4284
149 Ga0268264_10292980 3300028381 Bacteria 1529
150 Ga0268264_10374749 3300028381 Bacteria 1361
151 Ga0265318_10000404 3300028577 Bacteria 33512
152 Ga0307517_10020464 3300028786 Bacteria 8426
153 Ga0265331_10016598 3300031250 Bacteria 3863
154 Ga0307513_10054955 3300031456 Bacteria 4264
155 Ga0307509_10077905 3300031507 Bacteria 3437
156 Ga0265313_10035664 3300031595 Bacteria 2503
157 Ga0316579_10034367 3300031691 Bacteria 2333
158 Ga0316579_10105468 3300031691 Bacteria 1351
159 Ga0316576_10026352 3300031727 Bacteria 4079
160 Ga0316576_10032430 3300031727 Bacteria 3712
161 Ga0316576_10078261 3300031727 Bacteria 2450
162 Ga0316578_10034750 3300031728 Bacteria 2895
163 Ga0316578_10061158 3300031728 Bacteria 2218
164 Ga0307516_10142460 3300031730 Bacteria 2165
165 Ga0316583_10041590 3300032133 Bacteria 1626
166 Ga0307507_10000329 3300033179 Bacteria 96032
167 Ga0307507_10072256 3300033179 Bacteria 3111
168 Ga0373934_0028170 3300035086 Bacteria 2187
169 Ga0373936_0013813 3300035113 Unclassified 3082
170 Ga0373954_0092334 3300035118 Bacteria 1455
171 Ga0373957_0015724 3300035120 Bacteria 2610
172 Ga0316574_0096877 3300035398 Bacteria 1885
173 Ga0316574_0108939 3300035398 Bacteria 1775
174 Ga0316574_0136119 3300035398 Bacteria 1582
175 Ga0373924_0053153 3300035410 Bacteria 1682
176 Ga0373927_0115914 3300035695 Bacteria 1747
177 Ga0373933_0002822 3300035724 Bacteria 9706
178 Ga0373933_0024939 3300035724 Bacteria 3427
179 Ga0373937_0002589 3300036401 Bacteria 15052
180 Ga0373937_0004883 3300036401 Bacteria 11395
181 Ga0373937_0016693 3300036401 Bacteria 6524
182 Ga0373937_0056798 3300036401 Bacteria 3595
183 Ga0373937_0284947 3300036401 Bacteria 1561
184 Ga0316582_0008690 3300036647 Bacteria 5466
185 Ga0316582_0169488 3300036647 Bacteria 1482
186 Ga0316581_0006924 3300037588 Archaea 3022
187 Ga0400489_94303 3300039093 Bacteria 3293
188 Ga0436365_1849791 3300039437 Bacteria 109940
189 Ga0436360_0665768 3300039438 Bacteria 8498
190 Ga0436361_0129296 3300039447 Bacteria 2314
191 Ga0436361_0548194 3300039447 Bacteria 1880
192 Ga0439435_0024771 3300042436 Bacteria 1586
193 Ga0495629_0075831 3300046459 Bacteria 2348
194 Ga0495629_0131156 3300046459 Bacteria 1746
195 Ga0495582_0057101 3300046473 Bacteria 2152
196 Ga0495664_0003168 3300046477 Bacteria 8933
197 Ga0495608_0005119 3300046511 Bacteria 9367
198 Ga0495618_0131946 3300046514 Bacteria 1598
199 Ga0495628_0106773 3300046516 Bacteria 2156
200 Ga0495630_0083334 3300046517 Bacteria 2414
201 Ga0495587_0002191 3300046536 Bacteria 13062
202 Ga0495587_0057316 3300046536 Bacteria 2290
203 Ga0495645_0000500 3300046543 Bacteria 27082
204 Ga0495667_0027046 3300046559 Bacteria 3866
205 Ga0495667_0039895 3300046559 Bacteria 3119
206 Ga0495634_0050893 3300046642 Bacteria 2780
207 Ga0495635_0147732 3300046663 Bacteria 1600
208 Ga0495588_0058828 3300046674 Bacteria 1987
209 Ga0495623_0024434 3300046679 Bacteria 3894
210 Ga0495646_0202043 3300046680 Bacteria 1082
211 Ga0495613_0003026 3300046689 Bacteria 12571
212 Ga0495676_0008376 3300047321 Bacteria 9485
213 Ga0495680_0036498 3300047322 Bacteria 3945
214 Ga0495680_0142861 3300047322 Bacteria 1750
215 Ga0495675_0010430 3300047444 Bacteria 5807
216 Ga0495675_0054564 3300047444 Bacteria 2536
217 Ga0495684_0004392 3300047471 Bacteria 11016
218 Ga0495684_0080760 3300047471 Bacteria 2468
219 Ga0495602_0000143 3300048088 Bacteria 66782
220 Ga0495602_0157820 3300048088 Bacteria 1775
221 Ga0496119_0019141 3300048922 Bacteria 5058
222 Ga0496119_0061745 3300048922 Bacteria 2236
223 Ga0496120_0001773 3300048923 Bacteria 24305
224 Ga0496121_0019996 3300048924 Bacteria 6661
225 Ga0496121_0032166 3300048924 Bacteria 4775
226 Ga0496126_0085370 3300048929 Bacteria 2783
227 Ga0501292_002932 3300049515 Bacteria 2239
228 Ga0501034_0000813 3300049571 Bacteria 46435
229 Ga0501036_0120249 3300049572 Bacteria 2218
230 Ga0501038_0266452 3300049574 Bacteria 1352
231 Ga0501040_0065609 3300049576 Bacteria 2500
232 Ga0501042_0097283 3300049578 Bacteria 2115
233 Ga0501047_0014085 3300049581 Bacteria 7599
234 Ga0501072_0024686 3300049588 Bacteria 4679
235 Ga0501072_0251651 3300049588 Bacteria 1407
236 Ga0501075_0164324 3300049591 Bacteria 1693
237 Ga0501077_0009914 3300049593 Bacteria 5930
238 Ga0501081_0119950 3300049743 Bacteria 1872
239 Ga0501044_0030609 3300049823 Bacteria 5671
240 Ga0501044_0062819 3300049823 Bacteria 3795
241 Ga0501045_0027504 3300049824 Bacteria 4099
242 nmdc:mga06z11_31239_c1 3300050494 Bacteria 2586
243 nmdc:mga05p37_69073_c1 3300050507 Bacteria 4345
244 nmdc:mga08y16_148975_c1 3300050511 Bacteria 2433
245 nmdc:mga08y16_2541_c1 3300050511 Bacteria 18766
246 nmdc:mga0a205_276460_c1 3300050515 Bacteria 1555
247 Ga0495601_0001154 3300053077 Bacteria 14443
248 Ga0495601_0022600 3300053077 Bacteria 3862
249 Ga0495601_0072437 3300053077 Bacteria 2201
250 Ga0495612_0000641 3300053078 Bacteria 14041
251 Ga0495619_0002435 3300053085 Bacteria 12200
252 Ga0495619_0010266 3300053085 Bacteria 5896
253 Ga0500566_0061114 3300053094 Bacteria 2133
254 Ga0500572_000461 3300053111 Bacteria 14114
255 Ga0500559_0001272 3300053136 Bacteria 14741
256 Ga0500616_0012720 3300053153 Bacteria 4916
257 Ga0500639_041708 3300053163 Bacteria 2412
258 Ga0500596_002169 3300053735 Bacteria 3895
259 Ga0501084_0035304 3300054114 Bacteria 4179
260 Ga0530510_0017491 3300061734 Bacteria 5081
261 2503203576 2503198000 Bacteria 6884444
262 2508693046 2508501042 Bacteria 8719808
263 2588514022 2588253730 Bacteria 6881675
264 2694633337 2693429783 Bacteria 7019804
265 2694635049 2693429784 Bacteria 7241525
266 2756671351 2756170246 Bacteria 7451806
267 2792751025 2791355123 Bacteria 8049106
268 2874594187 2874590934 Bacteria 8299676
269 2874651958 2874645413 Bacteria 8214782
270 2876773585 2876771140 Bacteria 8287509
271 2876824787 2876818435 Bacteria 8274608
272 2879081514 2879074833 Bacteria 8279565
273 2881154826 2881147464 Bacteria 7779814
274 2882638030 2882632389 Bacteria 8154593
275 2885309199 2885305155 Bacteria 7348390
276 2898796370 2898795034 Bacteria 4294459
277 2924714924 2924710171 Bacteria 6752351
278 2958094376 2958092219 Bacteria 6861151
279 2977901895 2977898635 Bacteria 6675551
280 3004217590 3004211236 Bacteria 7417683
281 3004219937 3004218560 Bacteria 7421728
282 8001847938 8001845381 Bacteria 5804942
283 8016613010 8016603502 Bacteria 8731218
284 8019564350 8019555841 Bacteria 9642137
285 8019574429 8019565922 Bacteria 9639779
286 Ga0451833_1005144
287 JGI24748J21848_1000028
288 JGI24034J26672_10000058
289 Ga0065714_10002184
290 Ga0065704_10003133
291 Ga0065712_10000112
292 Ga0065715_10092051
293 Ga0065715_10093112
294 Ga0065715_10179253
295 Ga0065707_10003810
296 Ga0070690_100023307
297 Ga0068869_100295831
298 Ga0070666_10031039
299 Ga0070682_100002158
300 Ga0070689_100000416
301 Ga0070692_10007562
302 Ga0070669_100020783
303 Ga0070675_100063365
304 Ga0070671_100043293
305 Ga0070674_100009876
306 Ga0070673_100004028
307 Ga0070688_100025808
308 Ga0070703_10004982
309 Ga0070713_100064614
310 Ga0070710_10082998
311 Ga0070710_10090841
312 Ga0070711_100174777
313 Ga0070705_100033667
314 Ga0070705_100052170
315 Ga0070694_100000876
316 Ga0070708_100485175
317 Ga0070678_100038840
318 Ga0070685_10001656
319 Ga0070706_100000211
320 Ga0070707_100052932
321 Ga0070707_100426947
322 Ga0070698_100094740
323 Ga0070698_100255463
324 Ga0070699_100137841
325 Ga0070679_100062104
326 Ga0068853_100005525
327 Ga0070672_100015726
328 Ga0070686_100033018
329 Ga0070696_100152615
330 Ga0070665_100333201
331 Ga0070704_100030167
332 Ga0068857_100047545
333 Ga0068856_100039867
334 Ga0070702_100005431
335 Ga0070702_100020826
336 Ga0068852_100165780
337 Ga0068859_100091829
338 Ga0068859_100125349
339 Ga0068864_100050000
340 Ga0068861_100015075
341 Ga0068861_100039746
342 Ga0068863_100038498
343 Ga0068863_100062339
344 Ga0068858_100000298
345 Ga0068858_100071353
346 Ga0068858_100111840
347 Ga0068858_100210698
348 Ga0068860_100006748
349 Ga0068862_100016173
350 Ga0068862_100088225
351 Ga0081540_1024472
352 Ga0075363_100055297
353 Ga0070716_100022718
354 Ga0070712_100086387
355 Ga0075366_10007210
356 Ga0068871_100003688
357 Ga0075428_100001747
358 Ga0075433_10099229
359 Ga0075433_10374038
360 Ga0075434_100044625
361 Ga0075429_100174553
362 Ga0097620_100091824
363 Ga0097620_100125336
364 Ga0075435_100009246
365 Ga0105240_10001052
366 Ga0111539_10001541
367 Ga0111539_10028904
368 Ga0111539_10066850
369 Ga0105247_10000047
370 Ga0114129_10020741
371 Ga0114129_10074149
372 Ga0105243_10000028
373 Ga0105243_10011544
374 Ga0105241_10253542
375 Ga0105242_10000102
376 Ga0105242_10033755
377 Ga0105249_10014961
378 Ga0157378_10101099
379 Ga0157378_10124542
380 Ga0163162_10109760
381 Ga0157375_10054038
382 Ga0157375_10466052
383 Ga0163163_10051473
384 Ga0163163_10078782
385 Ga0157380_10002570
386 Ga0157380_10043272
387 Ga0157377_10054730
388 Ga0163161_10016130
389 Ga0213876_10000184
390 Ga0207672_1000194
391 Ga0207697_10007953
392 Ga0207653_10000047
393 Ga0207692_10039149
394 Ga0207710_10000001
395 Ga0207647_10007570
396 Ga0207647_10087299
397 Ga0207643_10030504
398 Ga0207684_10000450
399 Ga0207695_10000960
400 Ga0207693_10042289
401 Ga0207693_10094804
402 Ga0207663_10037577
403 Ga0207662_10002706
404 Ga0207662_10123723
405 Ga0207646_10063921
406 Ga0207659_10206365
407 Ga0207700_10008825
408 Ga0207644_10000207
409 Ga0207686_10000019
410 Ga0207686_10000278
411 Ga0207709_10000064
412 Ga0207670_10000123
413 Ga0207670_10216859
414 Ga0207691_10002057
415 Ga0207711_10126901
416 Ga0207651_10003700
417 Ga0207712_10076918
418 Ga0207703_10001434
419 Ga0207703_10187163
420 Ga0207708_10059286
421 Ga0207702_10415481
422 Ga0207648_10190302
423 Ga0207676_10023658
424 Ga0207675_100001348
425 Ga0207675_100025975
426 Ga0207675_100099807
427 Ga0207683_10057698
428 Ga0207698_10151788
429 Ga0207698_10245754
430 Ga0207428_10001808
431 Ga0207428_10003461
432 Ga0268266_10305111
433 Ga0268265_10024322
434 Ga0268264_10292980
435 Ga0268264_10374749
436 Ga0265318_10000404
437 Ga0307517_10020464
438 Ga0265331_10016598
439 Ga0307513_10054955
440 Ga0307509_10077905
441 Ga0265313_10035664
442 Ga0316579_10034367
443 Ga0316579_10105468
444 Ga0316576_10026352
445 Ga0316576_10032430
446 Ga0316576_10078261
447 Ga0316578_10034750
448 Ga0316578_10061158
449 Ga0307516_10142460
450 Ga0316583_10041590
451 Ga0307507_10000329
452 Ga0307507_10072256
453 Ga0373934_0028170
454 Ga0373936_0013813
455 Ga0373954_0092334
456 Ga0373957_0015724
457 Ga0316574_0096877
458 Ga0316574_0108939
459 Ga0316574_0136119
460 Ga0373924_0053153
461 Ga0373927_0115914
462 Ga0373933_0002822
463 Ga0373933_0024939
464 Ga0373937_0002589
465 Ga0373937_0004883
466 Ga0373937_0016693
467 Ga0373937_0056798
468 Ga0373937_0284947
469 Ga0316582_0008690
470 Ga0316582_0169488
471 Ga0316581_0006924
472 Ga0400489_94303
473 Ga0436365_1849791
474 Ga0436360_0665768
475 Ga0436361_0129296
476 Ga0436361_0548194
477 Ga0439435_0024771
478 Ga0495629_0075831
479 Ga0495629_0131156
480 Ga0495582_0057101
481 Ga0495664_0003168
482 Ga0495608_0005119
483 Ga0495618_0131946
484 Ga0495628_0106773
485 Ga0495630_0083334
486 Ga0495587_0002191
487 Ga0495587_0057316
488 Ga0495645_0000500
489 Ga0495667_0027046
490 Ga0495667_0039895
491 Ga0495634_0050893
492 Ga0495635_0147732
493 Ga0495588_0058828
494 Ga0495623_0024434
495 Ga0495646_0202043
496 Ga0495613_0003026
497 Ga0495676_0008376
498 Ga0495680_0036498
499 Ga0495680_0142861
500 Ga0495675_0010430
501 Ga0495675_0054564
502 Ga0495684_0004392
503 Ga0495684_0080760
504 Ga0495602_0000143
505 Ga0495602_0157820
506 Ga0496119_0019141
507 Ga0496119_0061745
508 Ga0496120_0001773
509 Ga0496121_0019996
510 Ga0496121_0032166
511 Ga0496126_0085370
512 Ga0501292_002932
513 Ga0501034_0000813
514 Ga0501036_0120249
515 Ga0501038_0266452
516 Ga0501040_0065609
517 Ga0501042_0097283
518 Ga0501047_0014085
519 Ga0501072_0024686
520 Ga0501072_0251651
521 Ga0501075_0164324
522 Ga0501077_0009914
523 Ga0501081_0119950
524 Ga0501044_0030609
525 Ga0501044_0062819
526 Ga0501045_0027504
527 nmdc:mga06z11_31239_c1
528 nmdc:mga05p37_69073_c1
529 nmdc:mga08y16_148975_c1
530 nmdc:mga08y16_2541_c1
531 nmdc:mga0a205_276460_c1
532 Ga0495601_0001154
533 Ga0495601_0022600
534 Ga0495601_0072437
535 Ga0495612_0000641
536 Ga0495619_0002435
537 Ga0495619_0010266
538 Ga0500566_0061114
539 Ga0500572_000461
540 Ga0500559_0001272
541 Ga0500616_0012720
542 Ga0500639_041708
543 Ga0500596_002169
544 Ga0501084_0035304
545 Ga0530510_0017491
546 2503203576
547 2508693046
548 2588514022
549 2694633337
550 2694635049
551 2756671351
552 2792751025
553 2874594187
554 2874651958
555 2876773585
556 2876824787
557 2879081514
558 2881154826
559 2882638030
560 2885309199
561 2898796370
562 2924714924
563 2958094376
564 2977901895
565 3004217590
566 3004219937
567 8001847938
568 8016613010
569 8019564350
570 8019574429

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02769

AIRS_C

AIR synthase related protein, C-terminal domain

176

328

0.94

PF00586

AIRS

AIR synthase related protein, N-terminal domain

46

164

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vti-assembly1.cif.gz_C crystal structure of hype-hypf complex 0.9757 61 338
3vyt-assembly1.cif.gz_C crystal structure of the hypc-hypd-hype complex (form i inward) 0.9632 61 347
2z1f-assembly1.cif.gz_A crystal structure of hype from thermococcus kodakaraensis (inward form) 0.9591 61 347
2rb9-assembly2.cif.gz_C crystal structure of e.coli hype 0.9522 23 347
2i6r-assembly2.cif.gz_D crystal structure of e. coli hype, a hydrogenase maturation protein 0.9522 22 347
ID Description Score Start End Superfamily
3vtiD02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9741 168 338 3.90.650.10
3vtiD01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9694 61 166 3.30.1330.10
3vtiD02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9629 168 338 3.90.650.10
3vysC01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9603 61 161 3.30.1330.10
2z1tA02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9601 168 347 3.90.650.10
ID Description Score Start End GO Terms
AF-X1IZ93-F1-model_v4 Hydrogenase expression/formation protein HypE 0.9864 96 248 GO:0051604
AF-X1MCR4-F1-model_v4 Hydrogenase expression/formation protein HypE 0.9847 62 347 GO:0051604
AF-M1X1U9-F1-model_v4 deleted 0.9837 56 347
AF-A0A2N2SIU5-F1-model_v4 Hydrogenase expression/formation protein HypE 0.9834 60 347 GO:0051604
AF-A0A2M7P649-F1-model_v4 Hydrogenase expression/formation protein HypE 0.9833 59 347 GO:0051604

Map