F386698

General Info

Members Datasets Scaffolds Average Seq Length
285 195 274 478

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10021919|Ga0081455_100219192
Length 549
Sequence MANPLLARKPIPQILEEMASENRLRRVLGPVQLSSLGIGAIIGTGIFVLTGIAAHDKAGPALMLSYALAGAACIFAAFCYAEFAAMVPVAGSAYTYAYATLGELLAWIIGWDLVLEYTVASATVAHGWSHYFQNFIGQFGFTLPLGLQNAPFDYHPDTGQLVSTGSIIDLPAVFAATLVTVILVKGIRESASFNTAMVVLKVVIVFLVIILGFPHVNPNNWTPFAPYGYTGISLFGHTVTGMTGAAGEPLGMIAGAATIFFAYIGFDSVSTHAEEARNPQRDVPIGILASLFICTALYIAVAAVITGMVHYKDIDIDAPIPSAFAAVGMPWAQLMISTGALAGITSVLLVLMLSQPRVMLAMARDGLVPQSFFSAVHERFRTPWKSSILTGVMVAVLGGFLPLRILAELVNIGTLLAFVIVCAAVLVLRKTHPEMHRPFRCPWVPFVPVMGILLCLMLMCSLPGENWLRLIIWLAIGLGGLVWRTVQLFFVQDVQTGLVWATKILTDPFHDIMLYHKAPLYLLRGELLDTEHVVDDEDITDEDLKPKSS

Samples

Sample ID Description Type Environment
1 2582580736 Prauserella sp. Am3 Isolate Unclassified
2 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
3 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
4 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
5 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
6 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
7 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
8 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
9 2902330777 Methylobacterium sp. 2A Isolate Unclassified
10 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
11 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
58 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
66 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
75 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
104 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
105 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
124 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
125 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
130 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
131 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
132 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
135 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
146 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
149 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
150 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
151 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
180 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
181 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
190 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
191 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
192 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.79
Metatranscriptomes 0.35
Isolates 3.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.05
Nodule 0
Rhizoplane 1.75
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 3.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10159405 3300005293 Bacteria 1644
2 Ga0070690_100017741 3300005330 Bacteria 4288
3 Ga0070670_100000010 3300005331 Bacteria 277365
4 Ga0070670_100009615 3300005331 Bacteria 8254
5 Ga0070666_10001027 3300005335 Bacteria 17099
6 Ga0068868_100054390 3300005338 Bacteria 3154
7 Ga0070689_100038362 3300005340 Bacteria 3665
8 Ga0070669_100000022 3300005353 Bacteria 177723
9 Ga0070669_100002061 3300005353 Bacteria 14544
10 Ga0070671_100000060 3300005355 Bacteria 73698
11 Ga0070688_100006392 3300005365 Bacteria 6300
12 Ga0070688_100073830 3300005365 Bacteria 2188
13 Ga0070667_100004209 3300005367 Bacteria 12151
14 Ga0070703_10000034 3300005406 Bacteria 66916
15 Ga0070709_10000017 3300005434 Bacteria 144321
16 Ga0070711_100000012 3300005439 Bacteria 162760
17 Ga0070711_100034434 3300005439 Bacteria 3378
18 Ga0070711_100087506 3300005439 Bacteria 2237
19 Ga0070705_100000814 3300005440 Bacteria 17531
20 Ga0070681_10011305 3300005458 Bacteria 8832
21 Ga0068867_100035300 3300005459 Bacteria 3626
22 Ga0070685_10000001 3300005466 Bacteria 349867
23 Ga0070706_100000061 3300005467 Bacteria 130709
24 Ga0070706_100270262 3300005467 Bacteria 1586
25 Ga0070707_100007348 3300005468 Bacteria 10233
26 Ga0070698_100131251 3300005471 Bacteria 2461
27 Ga0070699_100000079 3300005518 Bacteria 92794
28 Ga0070697_100124342 3300005536 Bacteria 2160
29 Ga0070696_100000165 3300005546 Bacteria 37489
30 Ga0070693_100005216 3300005547 Bacteria 6218
31 Ga0070665_100000479 3300005548 Bacteria 57667
32 Ga0070665_100004986 3300005548 Bacteria 13771
33 Ga0070665_100036872 3300005548 Bacteria 4917
34 Ga0070704_100196873 3300005549 Bacteria 1624
35 Ga0068855_100039345 3300005563 Bacteria 5613
36 Ga0068859_100037855 3300005617 Bacteria 4841
37 Ga0068864_100000018 3300005618 Bacteria 277365
38 Ga0068858_100005423 3300005842 Bacteria 12496
39 Ga0068860_100005932 3300005843 Bacteria 12294
40 Ga0068860_100005981 3300005843 Bacteria 12247
41 Ga0068862_100010455 3300005844 Bacteria 7663
42 Ga0081455_10021919 3300005937 Bacteria 5983
43 Ga0081455_10154664 3300005937 Bacteria 1764
44 Ga0081539_10052705 3300005985 Bacteria 2282
45 Ga0070716_100017081 3300006173 Bacteria 3755
46 Ga0097621_100001309 3300006237 Bacteria 17131
47 Ga0068871_100005027 3300006358 Bacteria 9238
48 Ga0075428_100003928 3300006844 Bacteria 16311
49 Ga0075428_100219413 3300006844 Bacteria 2054
50 Ga0075430_100063750 3300006846 Bacteria 3095
51 Ga0075431_100003400 3300006847 Bacteria 15428
52 Ga0075431_100058098 3300006847 Bacteria 3990
53 Ga0075431_100095264 3300006847 Bacteria 3073
54 Ga0075433_10006395 3300006852 Bacteria 9313
55 Ga0075434_100002661 3300006871 Bacteria 15775
56 Ga0075434_100012051 3300006871 Bacteria 8184
57 Ga0075434_100268097 3300006871 Bacteria 1727
58 Ga0068865_100109924 3300006881 Bacteria 2032
59 Ga0075436_100002195 3300006914 Bacteria 13464
60 Ga0075436_100002606 3300006914 Bacteria 12391
61 Ga0097620_100037857 3300006931 Bacteria 4841
62 Ga0099794_10023305 3300007265 Bacteria 2830
63 Ga0099795_10000001 3300007788 Bacteria 179944
64 Ga0105240_10008577 3300009093 Bacteria 14607
65 Ga0105240_10013483 3300009093 Bacteria 11227
66 Ga0105240_10046892 3300009093 Bacteria 5472
67 Ga0105240_10056372 3300009093 Bacteria 4918
68 Ga0111539_10028757 3300009094 Bacteria 6779
69 Ga0111539_10062944 3300009094 Bacteria 4390
70 Ga0111539_10070304 3300009094 Bacteria 4133
71 Ga0111539_10163295 3300009094 Bacteria 2605
72 Ga0105245_10020252 3300009098 Bacteria 5831
73 Ga0114129_10052984 3300009147 Bacteria 5692
74 Ga0114129_10325762 3300009147 Bacteria 2041
75 Ga0105248_10017705 3300009177 Bacteria 7859
76 Ga0105237_10026150 3300009545 Bacteria 5964
77 Ga0105035_100416 3300009988 Bacteria 2648
78 Ga0099796_10000001 3300010159 Bacteria 107173
79 Ga0157374_10008848 3300013296 Bacteria 8619
80 Ga0157374_10018024 3300013296 Bacteria 6226
81 Ga0157374_10091849 3300013296 Bacteria 2895
82 Ga0157378_10001324 3300013297 Bacteria 22249
83 Ga0157378_10014707 3300013297 Bacteria 6855
84 Ga0163162_10016546 3300013306 Bacteria 7207
85 Ga0157375_10007106 3300013308 Bacteria 9777
86 Ga0157375_10159779 3300013308 Bacteria 2395
87 Ga0163163_10000203 3300014325 Bacteria 61545
88 Ga0163163_10002837 3300014325 Bacteria 14648
89 Ga0157379_10004663 3300014968 Bacteria 11761
90 Ga0157376_10004036 3300014969 Bacteria 10152
91 Ga0209233_1006390 3300025261 Bacteria 3805
92 Ga0207653_10000015 3300025885 Bacteria 150553
93 Ga0207710_10006937 3300025900 Bacteria 4819
94 Ga0207699_10000017 3300025906 Bacteria 189613
95 Ga0207645_10034407 3300025907 Bacteria 3256
96 Ga0207705_10080202 3300025909 Bacteria 2378
97 Ga0207684_10000138 3300025910 Bacteria 132416
98 Ga0207707_10001248 3300025912 Bacteria 23844
99 Ga0207695_10000007 3300025913 Bacteria 1092551
100 Ga0207695_10013545 3300025913 Bacteria 9717
101 Ga0207663_10000014 3300025916 Bacteria 164118
102 Ga0207663_10094108 3300025916 Bacteria 1996
103 Ga0207646_10041323 3300025922 Bacteria 4146
104 Ga0207681_10000217 3300025923 Bacteria 45567
105 Ga0207681_10001462 3300025923 Bacteria 15228
106 Ga0207650_10000003 3300025925 Bacteria 1123235
107 Ga0207650_10010911 3300025925 Bacteria 6245
108 Ga0207687_10020057 3300025927 Bacteria 4433
109 Ga0207687_10057527 3300025927 Bacteria 2732
110 Ga0207644_10000036 3300025931 Bacteria 128383
111 Ga0207644_10047061 3300025931 Bacteria 3076
112 Ga0207711_10000987 3300025941 Bacteria 27279
113 Ga0207711_10002694 3300025941 Bacteria 15698
114 Ga0207667_10029945 3300025949 Bacteria 5896
115 Ga0207658_10000007 3300025986 Bacteria 329651
116 Ga0207658_10009511 3300025986 Bacteria 6598
117 Ga0207703_10027439 3300026035 Bacteria 4485
118 Ga0207678_10139423 3300026067 Bacteria 2069
119 Ga0207641_10004933 3300026088 Bacteria 11459
120 Ga0207641_10051264 3300026088 Bacteria 3494
121 Ga0207648_10039384 3300026089 Bacteria 4156
122 Ga0207676_10000003 3300026095 Bacteria 1123235
123 Ga0209179_1000006 3300027512 Bacteria 101289
124 Ga0268266_10000436 3300028379 Bacteria 62554
125 Ga0268266_10006739 3300028379 Bacteria 10475
126 Ga0268266_10034651 3300028379 Bacteria 4294
127 Ga0268265_10001881 3300028380 Bacteria 16701
128 Ga0268264_10000009 3300028381 Bacteria 724972
129 Ga0268264_10018231 3300028381 Bacteria 5741
130 Ga0265338_10028701 3300028800 Bacteria 5542
131 Ga0265760_10021496 3300031090 Bacteria 1868
132 Ga0265320_10000032 3300031240 Bacteria 141785
133 Ga0265325_10042687 3300031241 Bacteria 2369
134 Ga0265331_10006655 3300031250 Bacteria 6790
135 Ga0265327_10000027 3300031251 Bacteria 364541
136 Ga0265316_10000072 3300031344 Bacteria 103360
137 Ga0265316_10001983 3300031344 Bacteria 21551
138 Ga0265316_10011831 3300031344 Bacteria 7849
139 Ga0307410_10057227 3300031852 Bacteria 2654
140 Ga0307407_10036795 3300031903 Bacteria 2700
141 Ga0307409_100024783 3300031995 Bacteria 4192
142 Ga0373923_0033297 3300035111 Bacteria 2086
143 Ga0373953_0058681 3300035117 Bacteria 1569
144 Ga0373956_0052937 3300035119 Bacteria 1826
145 Ga0373946_0049469 3300035171 Bacteria 1753
146 Ga0373955_0027302 3300035172 Bacteria 2949
147 Ga0373931_0005440 3300035691 Bacteria 5889
148 Ga0373927_0096505 3300035695 Bacteria 1921
149 Ga0373937_0004624 3300036401 Bacteria 11687
150 Ga0373937_0015613 3300036401 Bacteria 6723
151 Ga0373925_0130836 3300037068 Bacteria 1956
152 Ga0436362_0853061 3300039453 Bacteria 1762
153 Ga0451577_0044529 3300042876 Bacteria 3973
154 Ga0451577_0140287 3300042876 Bacteria 2172
155 Ga0466972_0008439 3300044658 Bacteria 5165
156 Ga0466965_0006231 3300044683 Bacteria 5398
157 Ga0466966_0003624 3300044684 Bacteria 10191
158 Ga0466961_0007211 3300044693 Bacteria 7070
159 Ga0453684_0000530 3300044712 Bacteria 145639
160 Ga0453684_0013255 3300044712 Bacteria 13427
161 Ga0453684_0023935 3300044712 Bacteria 8956
162 Ga0453684_0089361 3300044712 Bacteria 3810
163 Ga0466968_0057921 3300044735 Bacteria 1666
164 Ga0466957_0005376 3300044842 Bacteria 7190
165 Ga0466958_0006188 3300045836 Bacteria 6494
166 Ga0495592_0024922 3300046454 Bacteria 4545
167 Ga0495592_0091787 3300046454 Bacteria 2177
168 Ga0495651_0000055 3300046462 Bacteria 83743
169 Ga0495651_0011115 3300046462 Bacteria 6924
170 Ga0495653_0001394 3300046463 Bacteria 18788
171 Ga0495608_0003445 3300046511 Bacteria 11334
172 Ga0495628_0000473 3300046516 Bacteria 36747
173 Ga0495628_0010993 3300046516 Bacteria 7665
174 Ga0495630_0042270 3300046517 Bacteria 3404
175 Ga0495652_0000766 3300046529 Bacteria 36983
176 Ga0495587_0000286 3300046536 Bacteria 35751
177 Ga0495645_0029870 3300046543 Bacteria 3969
178 Ga0495667_0000335 3300046559 Bacteria 29842
179 Ga0495667_0002225 3300046559 Bacteria 12980
180 Ga0495634_0103986 3300046642 Bacteria 1832
181 Ga0495657_0002088 3300046675 Bacteria 16983
182 Ga0495657_0045559 3300046675 Bacteria 2976
183 Ga0495599_0000779 3300046678 Bacteria 17940
184 Ga0495613_0093471 3300046689 Bacteria 2177
185 Ga0495600_0000494 3300046809 Bacteria 20403
186 Ga0495604_0009754 3300047317 Bacteria 7596
187 Ga0495674_0000967 3300047319 Bacteria 27498
188 Ga0495674_0057929 3300047319 Bacteria 3389
189 Ga0495680_0002307 3300047322 Bacteria 19599
190 Ga0495680_0002427 3300047322 Bacteria 19073
191 Ga0495675_0000161 3300047444 Bacteria 47741
192 Ga0495684_0001169 3300047471 Bacteria 21119
193 Ga0495684_0013634 3300047471 Bacteria 6259
194 Ga0495602_0050742 3300048088 Bacteria 3704
195 Ga0495602_0054609 3300048088 Bacteria 3525
196 Ga0496100_0029105 3300048903 Bacteria 3414
197 Ga0496104_0030300 3300048907 Bacteria 5026
198 Ga0496106_0167767 3300048909 Bacteria 1739
199 Ga0496110_0029321 3300048913 Bacteria 4734
200 Ga0496115_0033775 3300048918 Bacteria 4040
201 Ga0496124_0144838 3300048927 Bacteria 1871
202 Ga0501032_0033844 3300049569 Bacteria 3500
203 Ga0501033_0064437 3300049570 Bacteria 2697
204 Ga0501034_0011941 3300049571 Bacteria 8977
205 Ga0501034_0113192 3300049571 Bacteria 2703
206 Ga0501037_0001226 3300049573 Bacteria 18935
207 Ga0501037_0033511 3300049573 Bacteria 3793
208 Ga0501038_0009238 3300049574 Bacteria 9047
209 Ga0501038_0012697 3300049574 Bacteria 7698
210 Ga0501038_0035067 3300049574 Bacteria 4408
211 Ga0501039_0002566 3300049575 Bacteria 13558
212 Ga0501039_0015134 3300049575 Bacteria 5902
213 Ga0501039_0018396 3300049575 Bacteria 5363
214 Ga0501040_0003622 3300049576 Bacteria 10001
215 Ga0501040_0008836 3300049576 Bacteria 6546
216 Ga0501041_0000151 3300049577 Bacteria 30783
217 Ga0501042_0002658 3300049578 Bacteria 11001
218 Ga0501042_0006019 3300049578 Bacteria 7854
219 Ga0501043_0000185 3300049579 Bacteria 56468
220 Ga0501046_0023877 3300049580 Bacteria 5022
221 Ga0501047_0086350 3300049581 Bacteria 3015
222 Ga0501067_0012369 3300049583 Bacteria 4732
223 Ga0501067_0154528 3300049583 Bacteria 1278
224 Ga0501068_0000123 3300049584 Bacteria 34311
225 Ga0501068_0015811 3300049584 Bacteria 4343
226 Ga0501070_0005639 3300049586 Bacteria 10678
227 Ga0501070_0072898 3300049586 Bacteria 2842
228 Ga0501071_0009054 3300049587 Bacteria 6608
229 Ga0501072_0000002 3300049588 Bacteria 319523
230 Ga0501072_0001485 3300049588 Bacteria 17560
231 Ga0501074_0022753 3300049590 Bacteria 4556
232 Ga0501074_0125012 3300049590 Bacteria 1839
233 Ga0501075_0004408 3300049591 Bacteria 9526
234 Ga0501075_0005662 3300049591 Bacteria 8551
235 Ga0501076_0000836 3300049592 Bacteria 20010
236 Ga0501076_0005880 3300049592 Bacteria 8848
237 Ga0501076_0111288 3300049592 Bacteria 2213
238 Ga0501077_0001467 3300049593 Bacteria 14189
239 Ga0501077_0021804 3300049593 Bacteria 4056
240 Ga0501077_0121842 3300049593 Bacteria 1653
241 Ga0501079_0000190 3300049741 Bacteria 35319
242 Ga0501079_0006199 3300049741 Bacteria 8974
243 Ga0501079_0007188 3300049741 Bacteria 8405
244 Ga0501080_0012940 3300049742 Bacteria 7660
245 Ga0501081_0001762 3300049743 Bacteria 13424
246 Ga0501081_0007305 3300049743 Bacteria 7174
247 Ga0501083_0008528 3300049744 Bacteria 7236
248 Ga0501083_0012829 3300049744 Bacteria 5860
249 Ga0501044_0018184 3300049823 Bacteria 7539
250 Ga0501044_0059972 3300049823 Bacteria 3897
251 Ga0501045_0001028 3300049824 Bacteria 18350
252 nmdc:mga05p37_412956_c1 3300050507 Bacteria 1573
253 nmdc:mga05p37_52357_c1 3300050507 Bacteria 5020
254 nmdc:mga0qj67_66571_c1 3300050509 Bacteria 2869
255 nmdc:mga06r32_11525_c1 3300050510 Bacteria 7964
256 nmdc:mga08y16_112943_c1 3300050511 Bacteria 2828
257 nmdc:mga0n895_101377_c1 3300050512 Bacteria 2889
258 nmdc:mga0n895_258010_c1 3300050512 Bacteria 1769
259 nmdc:mga0n895_26184_c1 3300050512 Bacteria 5520
260 nmdc:mga0rr50_122708_c1 3300050513 Bacteria 2070
261 nmdc:mga0rr50_203711_c1 3300050513 Bacteria 1627
262 nmdc:mga08x19_19_c1 3300050514 Bacteria 315774
263 Ga0500595_025065 3300053119 Bacteria 2074
264 Ga0500564_009200 3300053138 Bacteria 4288
265 Ga0501084_0000024 3300054114 Bacteria 137282
266 Ga0501084_0010440 3300054114 Bacteria 7679
267 Ga0501084_0011239 3300054114 Bacteria 7412
268 Ga0501084_0022179 3300054114 Bacteria 5298
269 Ga0501082_0001580 3300060353 Bacteria 20090
270 Ga0501082_0040085 3300060353 Bacteria 4040
271 Ga0501082_0042686 3300060353 Bacteria 3909
272 Ga0530510_0001037 3300061734 Bacteria 18387
273 Ga0530510_0005962 3300061734 Bacteria 8453
274 Ga0530510_0109967 3300061734 Bacteria 2018

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049583 Ga0501067_0154528 Ga0501067_0154528_16_1266 359
2 3300048927 Ga0496124_0144838 Ga0496124_0144838_636_1847 370
3 3300007788 Ga0099795_10000001 Ga0099795_1000000169 387
4 3300010159 Ga0099796_10000001 Ga0099796_1000000154 387
5 3300027512 Ga0209179_1000006 Ga0209179_100000679 387
6 3300005335 Ga0070666_10001027 Ga0070666_1000102711 392
7 3300005338 Ga0068868_100054390 Ga0068868_1000543903 392
8 3300005340 Ga0070689_100038362 Ga0070689_1000383621 392
9 3300005548 Ga0070665_100036872 Ga0070665_1000368723 392
10 3300005842 Ga0068858_100005423 Ga0068858_10000542313 392
11 3300005843 Ga0068860_100005932 Ga0068860_1000059325 392
12 3300006237 Ga0097621_100001309 Ga0097621_10000130911 392
13 3300006358 Ga0068871_100005027 Ga0068871_1000050273 392
14 3300006881 Ga0068865_100109924 Ga0068865_1001099242 392
15 3300013296 Ga0157374_10018024 Ga0157374_100180246 392
16 3300013306 Ga0163162_10016546 Ga0163162_100165464 392
17 3300013308 Ga0157375_10007106 Ga0157375_1000710610 392
18 3300014325 Ga0163163_10002837 Ga0163163_1000283712 392
19 3300014968 Ga0157379_10004663 Ga0157379_1000466312 392
20 3300014969 Ga0157376_10004036 Ga0157376_100040365 392
21 3300025927 Ga0207687_10057527 Ga0207687_100575272 392
22 3300025931 Ga0207644_10047061 Ga0207644_100470612 392
23 3300025941 Ga0207711_10002694 Ga0207711_1000269411 392
24 3300025986 Ga0207658_10009511 Ga0207658_100095112 392
25 3300026088 Ga0207641_10004933 Ga0207641_1000493310 392
26 3300028379 Ga0268266_10034651 Ga0268266_100346513 392
27 3300028381 Ga0268264_10018231 Ga0268264_100182315 392
28 3300048907 Ga0496104_0030300 Ga0496104_0030300_3148_4551 392
29 3300048909 Ga0496106_0167767 Ga0496106_0167767_141_1544 392
30 3300048913 Ga0496110_0029321 Ga0496110_0029321_84_1487 392
31 3300048903 Ga0496100_0029105 Ga0496100_0029105_258_1661 397
32 3300005439 Ga0070711_100087506 Ga0070711_1000875062 399
33 3300025916 Ga0207663_10094108 Ga0207663_100941081 399
34 3300048918 Ga0496115_0033775 Ga0496115_0033775_1840_3243 399
35 3300031090 Ga0265760_10021496 Ga0265760_100214962 409
36 3300005439 Ga0070711_100034434 Ga0070711_1000344342 424
37 3300025261 Ga0209233_1006390 Ga0209233_10063901 427
38 3300025913 Ga0207695_10000007 Ga0207695_10000007484 427
39 3300026067 Ga0207678_10139423 Ga0207678_101394232 427
40 3300054114 Ga0501084_0022179 Ga0501084_0022179_45_1391 428
41 iso_pu_bacteria 2902330777 2902336528 428
42 3300009093 Ga0105240_10008577 Ga0105240_100085772 430
43 3300009545 Ga0105237_10026150 Ga0105237_100261504 430
44 iso_pu_bacteria 2928125067 2928128646 430
45 3300044735 Ga0466968_0057921 Ga0466968_0057921_32_1426 431
46 3300005563 Ga0068855_100039345 Ga0068855_1000393455 432
47 3300009093 Ga0105240_10056372 Ga0105240_100563726 432
48 3300025913 Ga0207695_10013545 Ga0207695_100135459 432
49 3300025949 Ga0207667_10029945 Ga0207667_100299455 432
50 3300028800 Ga0265338_10028701 Ga0265338_100287015 432
51 3300044684 Ga0466966_0003624 Ga0466966_0003624_4254_5681 432
52 3300044693 Ga0466961_0007211 Ga0466961_0007211_2152_3579 432
53 3300044842 Ga0466957_0005376 Ga0466957_0005376_1691_3118 432
54 3300045836 Ga0466958_0006188 Ga0466958_0006188_2032_3459 432
55 iso_pu_bacteria 2889306138 2889306876 432
56 iso_pu_bacteria 2902405164 2902411585 432
57 3300049569 Ga0501032_0033844 Ga0501032_0033844_538_2010 433
58 3300049571 Ga0501034_0011941 Ga0501034_0011941_7495_8967 433
59 3300049573 Ga0501037_0001226 Ga0501037_0001226_11300_12772 433
60 3300049574 Ga0501038_0012697 Ga0501038_0012697_3771_5243 433
61 3300049575 Ga0501039_0002566 Ga0501039_0002566_7235_8707 433
62 3300049579 Ga0501043_0000185 Ga0501043_0000185_11309_12781 433
63 3300049586 Ga0501070_0005639 Ga0501070_0005639_8669_10141 433
64 3300049823 Ga0501044_0059972 Ga0501044_0059972_2400_3872 433
65 3300009094 Ga0111539_10062944 Ga0111539_100629443 435
66 iso_pu_bacteria 2595698237 2596373461 435
67 3300005536 Ga0070697_100124342 Ga0070697_1001243421 439
68 3300009093 Ga0105240_10046892 Ga0105240_100468923 439
69 3300031852 Ga0307410_10057227 Ga0307410_100572272 439
70 3300031903 Ga0307407_10036795 Ga0307407_100367951 439
71 3300031995 Ga0307409_100024783 Ga0307409_1000247833 439
72 3300035171 Ga0373946_0049469 Ga0373946_0049469_73_1488 439
73 3300044712 Ga0453684_0023935 Ga0453684_0023935_4654_6174 439
74 3300048088 Ga0495602_0050742 Ga0495602_0050742_2195_3637 439
75 3300044658 Ga0466972_0008439 Ga0466972_0008439_121_1602 443
76 3300025907 Ga0207645_10034407 Ga0207645_100344072 445
77 3300005330 Ga0070690_100017741 Ga0070690_1000177413 448
78 3300005331 Ga0070670_100009615 Ga0070670_1000096159 448
79 3300005365 Ga0070688_100073830 Ga0070688_1000738302 448
80 3300005459 Ga0068867_100035300 Ga0068867_1000353003 448
81 3300025925 Ga0207650_10010911 Ga0207650_100109114 448
82 3300026089 Ga0207648_10039384 Ga0207648_100393844 448
83 3300035691 Ga0373931_0005440 Ga0373931_0005440_1496_3067 448
84 3300005331 Ga0070670_100000010 Ga0070670_1000000109 450
85 3300005353 Ga0070669_100002061 Ga0070669_1000020616 450
86 3300005355 Ga0070671_100000060 Ga0070671_10000006028 450
87 3300005365 Ga0070688_100006392 Ga0070688_1000063924 450
88 3300005367 Ga0070667_100004209 Ga0070667_1000042099 450
89 3300005466 Ga0070685_10000001 Ga0070685_10000001158 450
90 3300005548 Ga0070665_100004986 Ga0070665_10000498612 450
91 3300005617 Ga0068859_100037855 Ga0068859_1000378553 450
92 3300005618 Ga0068864_100000018 Ga0068864_100000018285 450
93 3300005843 Ga0068860_100005981 Ga0068860_10000598111 450
94 3300005844 Ga0068862_100010455 Ga0068862_1000104555 450
95 3300006931 Ga0097620_100037857 Ga0097620_1000378574 450
96 3300009177 Ga0105248_10017705 Ga0105248_100177057 450
97 3300014325 Ga0163163_10000203 Ga0163163_1000020356 450
98 3300025900 Ga0207710_10006937 Ga0207710_100069374 450
99 3300025923 Ga0207681_10001462 Ga0207681_1000146211 450
100 3300025925 Ga0207650_10000003 Ga0207650_10000003491 450
101 3300025931 Ga0207644_10000036 Ga0207644_1000003620 450
102 3300025941 Ga0207711_10000987 Ga0207711_1000098718 450
103 3300025986 Ga0207658_10000007 Ga0207658_10000007280 450
104 3300026035 Ga0207703_10027439 Ga0207703_100274392 450
105 3300026088 Ga0207641_10051264 Ga0207641_100512644 450
106 3300026095 Ga0207676_10000003 Ga0207676_10000003604 450
107 3300028379 Ga0268266_10006739 Ga0268266_100067397 450
108 3300028380 Ga0268265_10001881 Ga0268265_100018814 450
109 3300028381 Ga0268264_10000009 Ga0268264_10000009173 450
110 3300031250 Ga0265331_10006655 Ga0265331_100066552 450
111 3300031251 Ga0265327_10000027 Ga0265327_10000027270 450
112 3300053119 Ga0500595_025065 Ga0500595_025065_336_1799 450
113 3300053138 Ga0500564_009200 Ga0500564_009200_1533_2990 450
114 3300031240 Ga0265320_10000032 Ga0265320_10000032105 451
115 3300039453 Ga0436362_0853061 Ga0436362_0853061_131_1606 451
116 3300044683 Ga0466965_0006231 Ga0466965_0006231_354_1835 452
117 3300031344 Ga0265316_10000072 Ga0265316_1000007277 453
118 3300009988 Ga0105035_100416 Ga0105035_1004162 454
119 3300035111 Ga0373923_0033297 Ga0373923_0033297_599_2032 455
120 3300035117 Ga0373953_0058681 Ga0373953_0058681_30_1463 455
121 3300035119 Ga0373956_0052937 Ga0373956_0052937_362_1795 455
122 3300035172 Ga0373955_0027302 Ga0373955_0027302_1279_2712 455
123 3300036401 Ga0373937_0015613 Ga0373937_0015613_1661_3094 455
124 3300049583 Ga0501067_0012369 Ga0501067_0012369_733_2244 456
125 3300049584 Ga0501068_0000123 Ga0501068_0000123_18090_19601 456
126 3300049586 Ga0501070_0072898 Ga0501070_0072898_769_2280 456
127 3300049588 Ga0501072_0000002 Ga0501072_0000002_47834_49345 456
128 3300049593 Ga0501077_0021804 Ga0501077_0021804_761_2272 456
129 3300049741 Ga0501079_0007188 Ga0501079_0007188_1182_2693 456
130 3300049744 Ga0501083_0012829 Ga0501083_0012829_1784_3295 456
131 3300049823 Ga0501044_0018184 Ga0501044_0018184_5391_6902 456
132 3300054114 Ga0501084_0000024 Ga0501084_0000024_35067_36578 456
133 3300061734 Ga0530510_0109967 Ga0530510_0109967_10_1521 456
134 3300005468 Ga0070707_100007348 Ga0070707_1000073485 457
135 3300025922 Ga0207646_10041323 Ga0207646_100413235 457
136 iso_pu_bacteria 2816332139 2816505299 457
137 3300005467 Ga0070706_100270262 Ga0070706_1002702621 458
138 3300005471 Ga0070698_100131251 Ga0070698_1001312511 458
139 3300006852 Ga0075433_10006395 Ga0075433_100063956 459
140 3300006871 Ga0075434_100012051 Ga0075434_1000120518 459
141 3300006914 Ga0075436_100002195 Ga0075436_1000021953 459
142 3300050507 nmdc:mga05p37_412956_c1 nmdc:mga05p37_412956_c1_18_1487 459
143 iso_pu_bacteria 2842888712 2842890878 459
144 3300046689 Ga0495613_0093471 Ga0495613_0093471_33_1571 460
145 3300044712 Ga0453684_0000530 Ga0453684_0000530_130694_132223 461
146 3300049571 Ga0501034_0113192 Ga0501034_0113192_356_1942 462
147 3300035695 Ga0373927_0096505 Ga0373927_0096505_254_1702 463
148 3300037068 Ga0373925_0130836 Ga0373925_0130836_324_1772 463
149 3300006847 Ga0075431_100003400 Ga0075431_1000034002 464
150 3300009094 Ga0111539_10070304 Ga0111539_100703043 464
151 3300050512 nmdc:mga0n895_26184_c1 nmdc:mga0n895_26184_c1_2127_3599 464
152 3300050513 nmdc:mga0rr50_122708_c1 nmdc:mga0rr50_122708_c1_115_1587 464
153 3300005547 Ga0070693_100005216 Ga0070693_1000052164 465
154 3300050512 nmdc:mga0n895_101377_c1 nmdc:mga0n895_101377_c1_886_2376 465
155 3300009147 Ga0114129_10325762 Ga0114129_103257622 466
156 3300013296 Ga0157374_10091849 Ga0157374_100918492 466
157 3300046454 Ga0495592_0024922 Ga0495592_0024922_1695_3218 466
158 3300046462 Ga0495651_0011115 Ga0495651_0011115_3785_5308 466
159 3300046463 Ga0495653_0001394 Ga0495653_0001394_2070_3593 466
160 3300046511 Ga0495608_0003445 Ga0495608_0003445_7331_8854 466
161 3300046516 Ga0495628_0000473 Ga0495628_0000473_26315_27838 466
162 3300046529 Ga0495652_0000766 Ga0495652_0000766_14174_15697 466
163 3300046536 Ga0495587_0000286 Ga0495587_0000286_25233_26756 466
164 3300046559 Ga0495667_0000335 Ga0495667_0000335_15404_16927 466
165 3300046675 Ga0495657_0002088 Ga0495657_0002088_11507_13030 466
166 3300046678 Ga0495599_0000779 Ga0495599_0000779_52_1575 466
167 3300046809 Ga0495600_0000494 Ga0495600_0000494_5588_7111 466
168 3300047319 Ga0495674_0000967 Ga0495674_0000967_22403_23926 466
169 3300047322 Ga0495680_0002307 Ga0495680_0002307_14904_16427 466
170 3300047444 Ga0495675_0000161 Ga0495675_0000161_44054_45577 466
171 3300047471 Ga0495684_0001169 Ga0495684_0001169_8519_10042 466
172 3300048088 Ga0495602_0054609 Ga0495602_0054609_1933_3456 466
173 3300009093 Ga0105240_10013483 Ga0105240_100134836 467
174 iso_pu_bacteria 2687453341 2688391131 467
175 3300005549 Ga0070704_100196873 Ga0070704_1001968731 468
176 3300013297 Ga0157378_10014707 Ga0157378_100147074 468
177 3300031344 Ga0265316_10011831 Ga0265316_100118312 469
178 iso_pu_bacteria 2866612099 2866618193 469
179 3300013308 Ga0157375_10159779 Ga0157375_101597792 471
180 iso_pu_bacteria 2582580736 2583152903 471
181 3300006871 Ga0075434_100268097 Ga0075434_1002680972 472
182 3300050512 nmdc:mga0n895_258010_c1 nmdc:mga0n895_258010_c1_121_1602 472
183 3300042876 Ga0451577_0140287 Ga0451577_0140287_423_1904 473
184 3300046454 Ga0495592_0091787 Ga0495592_0091787_663_2144 473
185 3300049573 Ga0501037_0033511 Ga0501037_0033511_503_1993 474
186 3300049574 Ga0501038_0009238 Ga0501038_0009238_6921_8411 474
187 3300049575 Ga0501039_0015134 Ga0501039_0015134_468_1958 474
188 3300049576 Ga0501040_0003622 Ga0501040_0003622_1862_3352 474
189 3300049577 Ga0501041_0000151 Ga0501041_0000151_1902_3392 474
190 3300049578 Ga0501042_0006019 Ga0501042_0006019_1774_3264 474
191 3300049580 Ga0501046_0023877 Ga0501046_0023877_1959_3449 474
192 3300049584 Ga0501068_0015811 Ga0501068_0015811_30_1520 474
193 3300049587 Ga0501071_0009054 Ga0501071_0009054_3245_4735 474
194 3300049588 Ga0501072_0001485 Ga0501072_0001485_5096_6586 474
195 3300049590 Ga0501074_0022753 Ga0501074_0022753_541_2031 474
196 3300049591 Ga0501075_0005662 Ga0501075_0005662_1835_3325 474
197 3300049592 Ga0501076_0000836 Ga0501076_0000836_16656_18146 474
198 3300049593 Ga0501077_0001467 Ga0501077_0001467_6492_7982 474
199 3300049741 Ga0501079_0000190 Ga0501079_0000190_1038_2528 474
200 3300049743 Ga0501081_0007305 Ga0501081_0007305_1775_3265 474
201 3300049744 Ga0501083_0008528 Ga0501083_0008528_741_2231 474
202 3300049824 Ga0501045_0001028 Ga0501045_0001028_15029_16519 474
203 3300054114 Ga0501084_0010440 Ga0501084_0010440_4325_5815 474
204 3300060353 Ga0501082_0040085 Ga0501082_0040085_649_2139 474
205 3300061734 Ga0530510_0001037 Ga0530510_0001037_1869_3359 474
206 iso_pu_bacteria 2899359706 2899363876 475
207 3300005353 Ga0070669_100000022 Ga0070669_10000002228 476
208 3300006847 Ga0075431_100058098 Ga0075431_1000580982 476
209 3300025923 Ga0207681_10000217 Ga0207681_1000021728 476
210 3300036401 Ga0373937_0004624 Ga0373937_0004624_5613_7109 477
211 3300049581 Ga0501047_0086350 Ga0501047_0086350_1392_2885 477
212 3300054114 Ga0501084_0011239 Ga0501084_0011239_776_2269 477
213 3300060353 Ga0501082_0042686 Ga0501082_0042686_1824_3317 477
214 3300009094 Ga0111539_10163295 Ga0111539_101632952 480
215 3300009098 Ga0105245_10020252 Ga0105245_100202523 480
216 3300013296 Ga0157374_10008848 Ga0157374_100088482 480
217 3300013297 Ga0157378_10001324 Ga0157378_100013245 480
218 3300025927 Ga0207687_10020057 Ga0207687_100200572 480
219 3300046517 Ga0495630_0042270 Ga0495630_0042270_374_1909 480
220 3300046642 Ga0495634_0103986 Ga0495634_0103986_152_1675 480
221 3300050511 nmdc:mga08y16_112943_c1 nmdc:mga08y16_112943_c1_614_2212 480
222 3300005937 Ga0081455_10154664 Ga0081455_101546642 481
223 3300006844 Ga0075428_100003928 Ga0075428_1000039287 481
224 3300006871 Ga0075434_100002661 Ga0075434_1000026618 481
225 3300005985 Ga0081539_10052705 Ga0081539_100527052 482
226 3300042876 Ga0451577_0044529 Ga0451577_0044529_1436_2941 482
227 3300044712 Ga0453684_0089361 Ga0453684_0089361_1136_2641 482
228 3300049592 Ga0501076_0111288 Ga0501076_0111288_665_2179 482
229 3300007265 Ga0099794_10023305 Ga0099794_100233051 484
230 3300025909 Ga0207705_10080202 Ga0207705_100802022 484
231 3300031344 Ga0265316_10001983 Ga0265316_1000198315 484
232 3300005548 Ga0070665_100000479 Ga0070665_10000047920 486
233 3300009094 Ga0111539_10028757 Ga0111539_100287574 486
234 3300028379 Ga0268266_10000436 Ga0268266_1000043644 486
235 3300046462 Ga0495651_0000055 Ga0495651_0000055_934_2454 486
236 3300046543 Ga0495645_0029870 Ga0495645_0029870_1223_2743 486
237 3300046559 Ga0495667_0002225 Ga0495667_0002225_1830_3350 486
238 3300047322 Ga0495680_0002427 Ga0495680_0002427_15973_17493 486
239 3300005458 Ga0070681_10011305 Ga0070681_100113054 487
240 3300025912 Ga0207707_10001248 Ga0207707_1000124811 487
241 3300031241 Ga0265325_10042687 Ga0265325_100426872 487
242 3300046516 Ga0495628_0010993 Ga0495628_0010993_1052_2575 487
243 3300046675 Ga0495657_0045559 Ga0495657_0045559_418_1941 487
244 3300047317 Ga0495604_0009754 Ga0495604_0009754_4087_5610 487
245 3300047319 Ga0495674_0057929 Ga0495674_0057929_552_2075 487
246 3300047471 Ga0495684_0013634 Ga0495684_0013634_4328_5851 487
247 3300050513 nmdc:mga0rr50_203711_c1 nmdc:mga0rr50_203711_c1_86_1615 487
248 3300044712 Ga0453684_0013255 Ga0453684_0013255_6645_8171 489
249 3300049570 Ga0501033_0064437 Ga0501033_0064437_80_1609 489
250 3300049574 Ga0501038_0035067 Ga0501038_0035067_1742_3271 489
251 3300049575 Ga0501039_0018396 Ga0501039_0018396_1612_3141 489
252 3300049576 Ga0501040_0008836 Ga0501040_0008836_982_2511 489
253 3300049578 Ga0501042_0002658 Ga0501042_0002658_1960_3489 489
254 3300049590 Ga0501074_0125012 Ga0501074_0125012_220_1749 489
255 3300049591 Ga0501075_0004408 Ga0501075_0004408_3915_5444 489
256 3300049592 Ga0501076_0005880 Ga0501076_0005880_2085_3614 489
257 3300049593 Ga0501077_0121842 Ga0501077_0121842_48_1577 489
258 3300049741 Ga0501079_0006199 Ga0501079_0006199_5373_6902 489
259 3300049742 Ga0501080_0012940 Ga0501080_0012940_4743_6272 489
260 3300049743 Ga0501081_0001762 Ga0501081_0001762_10520_12049 489
261 3300060353 Ga0501082_0001580 Ga0501082_0001580_13015_14544 489
262 3300061734 Ga0530510_0005962 Ga0530510_0005962_1246_2775 489
263 3300005434 Ga0070709_10000017 Ga0070709_10000017102 492
264 3300006847 Ga0075431_100095264 Ga0075431_1000952642 492
265 3300009147 Ga0114129_10052984 Ga0114129_100529842 492
266 3300025906 Ga0207699_10000017 Ga0207699_1000001729 492
267 3300050507 nmdc:mga05p37_52357_c1 nmdc:mga05p37_52357_c1_1401_2966 492
268 3300050510 nmdc:mga06r32_11525_c1 nmdc:mga06r32_11525_c1_4342_5907 492
269 3300006914 Ga0075436_100002606 Ga0075436_10000260611 493
270 3300050514 nmdc:mga08x19_19_c1 nmdc:mga08x19_19_c1_217602_219149 493
271 3300005406 Ga0070703_10000034 Ga0070703_100000348 494
272 3300005467 Ga0070706_100000061 Ga0070706_10000006197 494
273 3300005937 Ga0081455_10021919 Ga0081455_100219192 494
274 3300006844 Ga0075428_100219413 Ga0075428_1002194131 494
275 3300006846 Ga0075430_100063750 Ga0075430_1000637502 494
276 3300025885 Ga0207653_10000015 Ga0207653_1000001583 494
277 3300025910 Ga0207684_10000138 Ga0207684_1000013894 494
278 3300050509 nmdc:mga0qj67_66571_c1 nmdc:mga0qj67_66571_c1_434_2011 494
279 3300005439 Ga0070711_100000012 Ga0070711_100000012104 495
280 3300006173 Ga0070716_100017081 Ga0070716_1000170813 495
281 3300025916 Ga0207663_10000014 Ga0207663_10000014102 495
282 3300005293 Ga0065715_10159405 Ga0065715_101594051 498
283 3300005440 Ga0070705_100000814 Ga0070705_1000008148 498
284 3300005518 Ga0070699_100000079 Ga0070699_10000007932 498
285 3300005546 Ga0070696_100000165 Ga0070696_1000001651 498

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13906

AA_permease_C

C-terminus of AA_permease

439

483

0.97

PF00324

AA_permease

Amino acid permease

32

463

0.87

PF13520

AA_permease_2

Amino acid permease

28

483

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.8793 5 470
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.8789 1 470
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.872 5 470
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.8716 1 470
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.7822 30 470
ID Description Score Start End Superfamily
af_P71892_30_474_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8866 24 474 1.20.1740.10
af_P71892_30_474_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8808 24 474 1.20.1740.10
af_O05896_24_492_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8555 24 481 1.20.1740.10
af_Q4CYX3_37_503_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8479 25 489 1.20.1740.10
af_Q4CYX3_37_503_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8427 25 489 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A534SK11-F1-model_v4 Amino acid permease 0.9296 2 214 GO:0015171
GO:0016020
AF-A0A4U3BLU4-F1-model_v4 deleted 0.9128 1 420
AF-A0A4U3BLU4-F1-model_v4 deleted 0.9106 1 420
AF-A0A2T5G635-F1-model_v4 Amino acid permease-associated region 0.9053 1 470 GO:0015171
GO:0016020
AF-A0A0W0VRD7-F1-model_v4 Amino acid transporter PotE 0.8989 5 485 GO:0015171
GO:0016020

Feature Viewer

pLDDT pTM Quality
72.82 0.76 High
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Predicted Structure (AlphaFold2)

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