F386671

General Info

Members Datasets Scaffolds Average Seq Length
285 229 570 240

Family's Representative Sequence

Representative Sequence 3300005543|Ga0070672_100367672|Ga0070672_1003676722
Length 271
Sequence MTTSDSSRPAVGRVPSAFATAPADSPKREARRRLDSAGDATKPDHTARVLLVLGGTSDIGRATALAFAEDGWTIQLAGRDLDALQREADDIATRTGVTVSVHRFDVLDTPSFGLLGEQARAQDDPDHAATVMRTNYEGPALVLGLLANRFLQRGHGTIVGVSSVAGDRGRASNYVYGSAKAGFSAFLSGLRNRTASSGVHVLTVKPGFVRTRMTRGMALPGALTASPTLVGQQIRDAATKRKDVVYIYPSWRLIMGVIKAIPEGVFKKKKL

Samples

Sample ID Description Type Environment
1 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
29 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
30 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
41 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
44 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
67 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
68 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
69 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
82 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
83 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
91 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
92 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
117 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
127 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
131 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
135 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
172 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
177 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
178 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
179 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
180 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
181 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
182 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
183 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
187 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
190 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
191 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
192 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
193 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
194 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
195 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
196 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
197 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
198 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
199 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
200 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
201 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
202 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
203 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
204 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
205 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
206 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
207 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
208 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
209 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
210 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
211 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
212 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
213 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
214 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
215 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
216 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
217 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
218 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
219 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
220 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
221 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
222 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
223 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
224 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
225 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
226 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
227 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
228 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere
229 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.32
Metatranscriptomes 0
Isolates 13.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.74
Nodule 9.47
Rhizoplane 3.86
Rhizosphere 59.65
Stem 0
Stem Tuber 0
Unclassified 1.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070672_100367672 3300005543 Bacteria 1228
2 JGI25153J46596_10009565 3300003215 Bacteria 4482
3 JGI25153J46596_10012649 3300003215 Bacteria 3621
4 rootH1_10012370 3300003316 Unclassified 1220
5 rootH2_10054744 3300003320 Bacteria 3295
6 JGI25160J50197_1017083 3300003354 Bacteria 2312
7 JGI25160J50197_1018721 3300003354 Bacteria 2147
8 Ga0055542_1005932 3300003762 Bacteria 2677
9 Ga0055524_1023443 3300003775 Bacteria 1986
10 Ga0055531_10007981 3300003794 Bacteria 5662
11 Ga0055543_1004603 3300004625 Bacteria 3701
12 Ga0065165_1003108 3300005262 Bacteria 12328
13 Ga0065165_1009149 3300005262 Bacteria 4487
14 Ga0065165_1018809 3300005262 Bacteria 2486
15 Ga0070683_100090964 3300005329 Bacteria 2865
16 Ga0070680_100346435 3300005336 Bacteria 1263
17 Ga0070669_100033889 3300005353 Bacteria 3696
18 Ga0070675_100018918 3300005354 Bacteria 5486
19 Ga0070667_100301017 3300005367 Bacteria 1444
20 Ga0070662_100195535 3300005457 Bacteria 1602
21 Ga0070681_10194287 3300005458 Bacteria 1949
22 Ga0068867_100143766 3300005459 Bacteria 1867
23 Ga0070665_100181924 3300005548 Bacteria 2103
24 Ga0070664_100156684 3300005564 Bacteria 2013
25 Ga0068854_100266791 3300005578 Bacteria 1373
26 Ga0068852_100084206 3300005616 Bacteria 2829
27 Ga0068864_100319515 3300005618 Bacteria 1458
28 Ga0081455_10098417 3300005937 Bacteria 2354
29 Ga0081539_10079241 3300005985 Bacteria 1731
30 Ga0097621_100097899 3300006237 Bacteria 2463
31 Ga0075370_10098040 3300006353 Bacteria 1695
32 Ga0099825_1026879 3300006941 Bacteria 3005
33 Ga0099824_1008618 3300006942 Bacteria 12970
34 Ga0099823_1064065 3300006944 Bacteria 1817
35 Ga0105240_10249438 3300009093 Bacteria 2054
36 Ga0111539_10325384 3300009094 Bacteria 1789
37 Ga0105237_10019579 3300009545 Bacteria 6990
38 Ga0105237_10100192 3300009545 Bacteria 2888
39 Ga0105238_10589074 3300009551 Bacteria 1119
40 Ga0105249_10787400 3300009553 Unclassified 1014
41 Ga0105239_10047764 3300010375 Bacteria 4692
42 Ga0105239_10088456 3300010375 Bacteria 3415
43 Ga0163162_10242624 3300013306 Bacteria 1933
44 Ga0157375_10430016 3300013308 Bacteria 1486
45 Ga0157376_10132514 3300014969 Bacteria 2226
46 Ga0157376_10299490 3300014969 Bacteria 1522
47 Ga0214544_1000072 3300021320 Bacteria 124664
48 Ga0213874_10017637 3300021377 Unclassified 1918
49 Ga0213875_10001431 3300021388 Bacteria 15500
50 Ga0213871_10007183 3300021441 Bacteria 2395
51 Ga0209563_103035 3300025230 Bacteria 3588
52 Ga0209148_1000275 3300025254 Bacteria 80696
53 Ga0209233_1005419 3300025261 Bacteria 4234
54 Ga0209233_1005680 3300025261 Bacteria 4115
55 Ga0209233_1027725 3300025261 Bacteria 1368
56 Ga0209564_1004992 3300025295 Bacteria 7807
57 Ga0209758_1000546 3300025297 Bacteria 59757
58 Ga0209758_1004442 3300025297 Bacteria 11664
59 Ga0209758_1035261 3300025297 Bacteria 1974
60 Ga0209256_1005688 3300025299 Bacteria 7005
61 Ga0207426_1008211 3300025302 Bacteria 4250
62 Ga0207426_1010176 3300025302 Bacteria 3669
63 Ga0209257_1001004 3300025304 Bacteria 38186
64 Ga0207688_10235434 3300025901 Bacteria 1106
65 Ga0207647_10141057 3300025904 Bacteria 1412
66 Ga0207654_10026658 3300025911 Bacteria 3132
67 Ga0207695_10000107 3300025913 Bacteria 252606
68 Ga0207695_10294353 3300025913 Bacteria 1515
69 Ga0207671_10339118 3300025914 Bacteria 1191
70 Ga0207660_10268526 3300025917 Bacteria 1351
71 Ga0207681_10287320 3300025923 Bacteria 1297
72 Ga0207659_10006386 3300025926 Bacteria 7220
73 Ga0207644_10130122 3300025931 Bacteria 1926
74 Ga0207706_10085984 3300025933 Bacteria 2764
75 Ga0207691_10035791 3300025940 Bacteria 4603
76 Ga0207691_10533134 3300025940 Bacteria 996
77 Ga0207679_10023451 3300025945 Bacteria 4221
78 Ga0207712_10374097 3300025961 Bacteria 1190
79 Ga0207668_10254731 3300025972 Bacteria 1427
80 Ga0209389_1000153 3300027296 Bacteria 58606
81 Ga0209589_1000098 3300027357 Bacteria 88220
82 Ga0209489_100283 3300027361 Bacteria 88220
83 Ga0209489_100936 3300027361 Bacteria 58586
84 Ga0209700_100011 3300027363 Bacteria 362159
85 Ga0209700_100299 3300027363 Bacteria 88220
86 Ga0268266_10070159 3300028379 Bacteria 3037
87 Ga0268266_10349808 3300028379 Bacteria 1389
88 Ga0268265_10067277 3300028380 Bacteria 2773
89 Ga0265338_10011497 3300028800 Bacteria 10219
90 Ga0265339_10000836 3300031249 Bacteria 23772
91 Ga0307414_10517883 3300032004 Bacteria 1058
92 Ga0307411_10519620 3300032005 Bacteria 1010
93 Ga0307510_10009621 3300033180 Bacteria 11521
94 Ga0373937_0282781 3300036401 Bacteria 1567
95 Ga0395905_0000042 3300037471 Bacteria 247894
96 Ga0436364_1097450 3300037853 Bacteria 76851
97 Ga0436363_0594211 3300039450 Plasmid 4363
98 Ga0451807_1330170 3300041486 Unclassified 859
99 Ga0439442_007517 3300042002 Bacteria 2192
100 Ga0439449_0027790 3300042007 Bacteria 2110
101 Ga0466969_0002980 3300044656 Bacteria 9027
102 Ga0466972_0000214 3300044658 Bacteria 40946
103 Ga0466972_0005666 3300044658 Bacteria 6264
104 Ga0466966_0000209 3300044684 Bacteria 39062
105 Ga0466966_0032562 3300044684 Bacteria 3377
106 Ga0466961_0000110 3300044693 Bacteria 54241
107 Ga0466961_0102256 3300044693 Bacteria 1805
108 Ga0466964_0015935 3300044706 Bacteria 2864
109 Ga0453684_0001542 3300044712 Bacteria 64357
110 Ga0466968_0000951 3300044735 Bacteria 10202
111 Ga0466960_0022166 3300044901 Bacteria 2836
112 Ga0466959_0003995 3300045049 Bacteria 9801
113 Ga0466958_0088730 3300045836 Bacteria 1911
114 Ga0466967_0382634 3300045976 Bacteria 1366
115 Ga0495592_0018513 3300046454 Bacteria 5297
116 Ga0495592_0039275 3300046454 Bacteria 3556
117 Ga0495603_0073093 3300046455 Bacteria 2015
118 Ga0495603_0093591 3300046455 Bacteria 1756
119 Ga0495629_0104422 3300046459 Bacteria 1976
120 Ga0495651_0006859 3300046462 Bacteria 8702
121 Ga0495651_0099408 3300046462 Bacteria 2169
122 Ga0495580_0049723 3300046472 Bacteria 2966
123 Ga0495662_0000799 3300046476 Bacteria 15271
124 Ga0495664_0043565 3300046477 Bacteria 2659
125 Ga0495664_0138023 3300046477 Bacteria 1478
126 Ga0495585_0078389 3300046492 Bacteria 1792
127 Ga0495606_0038163 3300046507 Bacteria 3252
128 Ga0495608_0001341 3300046511 Bacteria 17555
129 Ga0495608_0012281 3300046511 Bacteria 5949
130 Ga0495616_0064605 3300046513 Bacteria 1785
131 Ga0495618_0119299 3300046514 Bacteria 1689
132 Ga0495628_0040606 3300046516 Bacteria 3717
133 Ga0495630_0195412 3300046517 Bacteria 1544
134 Ga0495632_0111528 3300046519 Bacteria 1284
135 Ga0495648_0000160 3300046524 Bacteria 80523
136 Ga0495648_0007591 3300046524 Bacteria 8661
137 Ga0495666_0071059 3300046526 Bacteria 1655
138 Ga0495652_0024498 3300046529 Bacteria 5342
139 Ga0495652_0043136 3300046529 Bacteria 3887
140 Ga0495652_0066938 3300046529 Bacteria 3012
141 Ga0495652_0472988 3300046529 Bacteria 873
142 Ga0495665_0059980 3300046531 Bacteria 2008
143 Ga0495640_0037121 3300046533 Bacteria 3439
144 Ga0495586_0027781 3300046535 Bacteria 3027
145 Ga0495587_0016285 3300046536 Bacteria 4627
146 Ga0495587_0185779 3300046536 Bacteria 1177
147 Ga0495597_0178287 3300046542 Bacteria 860
148 Ga0495645_0011155 3300046543 Bacteria 6320
149 Ga0495645_0026995 3300046543 Bacteria 4171
150 Ga0495622_0018922 3300046557 Bacteria 3209
151 Ga0495667_0003759 3300046559 Bacteria 10205
152 Ga0495667_0034361 3300046559 Bacteria 3391
153 Ga0495634_0022666 3300046642 Bacteria 4424
154 Ga0495634_0069342 3300046642 Bacteria 2326
155 Ga0495635_0026946 3300046663 Bacteria 3998
156 Ga0495635_0397619 3300046663 Bacteria 915
157 Ga0495657_0008309 3300046675 Bacteria 7953
158 Ga0495657_0016912 3300046675 Bacteria 5302
159 Ga0495657_0041954 3300046675 Bacteria 3127
160 Ga0495657_0082641 3300046675 Bacteria 2075
161 Ga0495599_0313268 3300046678 Bacteria 945
162 Ga0495623_0362297 3300046679 Bacteria 787
163 Ga0495646_0050174 3300046680 Bacteria 2530
164 Ga0495646_0101166 3300046680 Bacteria 1652
165 Ga0495613_0059214 3300046689 Bacteria 2808
166 Ga0495613_0287902 3300046689 Bacteria 1139
167 Ga0495624_0092806 3300046690 Bacteria 1861
168 Ga0495649_0036800 3300046694 Bacteria 2688
169 Ga0495600_0119216 3300046809 Bacteria 1716
170 Ga0495604_0000573 3300047317 Bacteria 32294
171 Ga0495604_0022104 3300047317 Bacteria 5076
172 Ga0495604_0089022 3300047317 Bacteria 2295
173 Ga0495676_0006714 3300047321 Bacteria 10594
174 Ga0495676_0122645 3300047321 Bacteria 1888
175 Ga0495680_0014667 3300047322 Bacteria 6778
176 Ga0495683_0038343 3300047323 Bacteria 2427
177 Ga0495687_074329 3300047443 Bacteria 1352
178 Ga0495675_0002868 3300047444 Bacteria 10339
179 Ga0495675_0003014 3300047444 Bacteria 10114
180 Ga0495673_0050723 3300047469 Bacteria 1820
181 Ga0495684_0011087 3300047471 Bacteria 6967
182 Ga0495593_0015901 3300047673 Bacteria 4251
183 Ga0495593_0140826 3300047673 Bacteria 1222
184 Ga0495602_0006250 3300048088 Bacteria 12494
185 Ga0495602_0094502 3300048088 Bacteria 2470
186 Ga0495602_0128958 3300048088 Bacteria 2020
187 Ga0496101_0378060 3300048904 Bacteria 1114
188 Ga0496103_0382209 3300048906 Bacteria 905
189 Ga0496104_0007130 3300048907 Bacteria 9854
190 Ga0496105_0025607 3300048908 Bacteria 4804
191 Ga0496107_0073616 3300048910 Bacteria 2485
192 Ga0496110_0759678 3300048913 Bacteria 873
193 Ga0496112_0190327 3300048915 Bacteria 2014
194 Ga0496113_0167009 3300048916 Bacteria 1742
195 Ga0496114_0131966 3300048917 Bacteria 2158
196 Ga0496114_0373632 3300048917 Bacteria 1262
197 Ga0496116_0074485 3300048919 Bacteria 2135
198 Ga0496117_0058970 3300048920 Bacteria 2655
199 Ga0496117_0175657 3300048920 Bacteria 1238
200 Ga0496118_0166211 3300048921 Bacteria 1356
201 Ga0496119_0023419 3300048922 Bacteria 4379
202 Ga0496119_0099626 3300048922 Bacteria 1634
203 Ga0496120_0018079 3300048923 Bacteria 4552
204 Ga0496120_0041600 3300048923 Bacteria 2690
205 Ga0496124_0275792 3300048927 Bacteria 1229
206 Ga0496126_0220092 3300048929 Bacteria 1595
207 Ga0495682_0008635 3300049460 Bacteria 4010
208 Ga0501031_0020681 3300049568 Bacteria 4291
209 Ga0501031_0073480 3300049568 Bacteria 2226
210 Ga0501032_0022612 3300049569 Bacteria 4357
211 Ga0501033_0124758 3300049570 Bacteria 1867
212 Ga0501034_0457462 3300049571 Bacteria 1193
213 Ga0501037_0115156 3300049573 Bacteria 1935
214 Ga0501038_0212611 3300049574 Bacteria 1546
215 Ga0501046_0144802 3300049580 Bacteria 1795
216 Ga0501047_0000005 3300049581 Bacteria 456524
217 Ga0501047_0035167 3300049581 Bacteria 4839
218 Ga0501047_0042586 3300049581 Bacteria 4387
219 Ga0501070_0205488 3300049586 Bacteria 1617
220 Ga0501083_0004346 3300049744 Bacteria 9981
221 Ga0501282_011410 3300049778 Bacteria 955
222 Ga0501035_0014770 3300049822 Bacteria 7211
223 Ga0501035_0124776 3300049822 Bacteria 2248
224 Ga0501044_0249485 3300049823 Bacteria 1716
225 Ga0501044_0972629 3300049823 Bacteria 721
226 nmdc:mga06z11_113441_c1 3300050494 Bacteria 1503
227 nmdc:mga0sz30_21024_c2 3300050516 Bacteria 1942
228 Ga0495601_0237966 3300053077 Bacteria 1189
229 Ga0495612_0045482 3300053078 Bacteria 1797
230 Ga0495619_0052740 3300053085 Bacteria 2689
231 Ga0495619_0054598 3300053085 Bacteria 2645
232 Ga0500643_000049 3300053087 Bacteria 147107
233 Ga0500583_0036998 3300053092 Bacteria 2190
234 Ga0500566_0044762 3300053094 Bacteria 2549
235 Ga0500640_120326 3300053095 Bacteria 1053
236 Ga0500555_095000 3300053103 Bacteria 762
237 Ga0500592_010400 3300053116 Bacteria 1482
238 Ga0500642_0027803 3300053130 Bacteria 2325
239 Ga0500652_120809 3300053131 Bacteria 1095
240 Ga0500559_0009737 3300053136 Bacteria 4148
241 Ga0500568_0073714 3300053139 Bacteria 1303
242 Ga0500577_0050005 3300053142 Bacteria 1566
243 Ga0500620_012569 3300053155 Bacteria 2310
244 Ga0500634_0157309 3300053161 Bacteria 1054
245 Ga0500636_0002161 3300053177 Bacteria 10852
246 Ga0500661_027113 3300055283 Bacteria 1012
247 2513639836 2513237094 Bacteria 8789602
248 2513873614 2513237139 Bacteria 8737671
249 2513889585 2513237141 Bacteria 8496279
250 2745081596 2744054633 Bacteria 8678936
251 2805915698 2802429603 Bacteria 8777136
252 2824606103 2824600985 Bacteria 8488197
253 2824612239 2824609381 Bacteria 8672835
254 2824677563 2824671348 Bacteria 8369588
255 2824699070 2824696289 Bacteria 8335049
256 2841965933 2841957949 Bacteria 8652217
257 2841972573 2841966195 Bacteria 8673214
258 2844315209 2844315083 Bacteria 8138177
259 2847942066 2847939898 Bacteria 8606328
260 2849082953 2849076700 Bacteria 7039503
261 2874628895 2874628541 Bacteria 8630250
262 2876809444 2876808645 Bacteria 8824342
263 2879116674 2879110137 Bacteria 8907982
264 2888390763 2888388044 Bacteria 7304136
265 2903732109 2903727486 Bacteria 8281579
266 2906603158 2906602504 Bacteria 8295279
267 2906633380 2906626472 Bacteria 8826946
268 2908776168 2908775508 Bacteria 8092255
269 2912730647 2912723979 Bacteria 8557534
270 2912762273 2912757875 Bacteria 7940295
271 2919470384 2919468124 Bacteria 9133025
272 2922398933 2922393267 Bacteria 8285685
273 2932794404 2932794094 Bacteria 7915132
274 2932806688 2932801729 Bacteria 7987968
275 2935888459 2935883170 Bacteria 7964738
276 2941535598 2941531003 Bacteria 7653939
277 3005593160 3005587118 Bacteria 7794411
278 3005710912 3005710791 Bacteria 7622528
279 3005718214 3005718088 Bacteria 8283608
280 3006397727 3006393351 Bacteria 6615579
281 8006928561 8006926726 Bacteria 6749210
282 8016586471 8016583857 Bacteria 10421953
283 8019652574 8019648815 Bacteria 10014479
284 8056877979 8056875544 Bacteria 4355797
285 8056971201 8056967851 Bacteria 9038162
286 Ga0070672_100367672
287 JGI25153J46596_10009565
288 JGI25153J46596_10012649
289 rootH1_10012370
290 rootH2_10054744
291 JGI25160J50197_1017083
292 JGI25160J50197_1018721
293 Ga0055542_1005932
294 Ga0055524_1023443
295 Ga0055531_10007981
296 Ga0055543_1004603
297 Ga0065165_1003108
298 Ga0065165_1009149
299 Ga0065165_1018809
300 Ga0070683_100090964
301 Ga0070680_100346435
302 Ga0070669_100033889
303 Ga0070675_100018918
304 Ga0070667_100301017
305 Ga0070662_100195535
306 Ga0070681_10194287
307 Ga0068867_100143766
308 Ga0070665_100181924
309 Ga0070664_100156684
310 Ga0068854_100266791
311 Ga0068852_100084206
312 Ga0068864_100319515
313 Ga0081455_10098417
314 Ga0081539_10079241
315 Ga0097621_100097899
316 Ga0075370_10098040
317 Ga0099825_1026879
318 Ga0099824_1008618
319 Ga0099823_1064065
320 Ga0105240_10249438
321 Ga0111539_10325384
322 Ga0105237_10019579
323 Ga0105237_10100192
324 Ga0105238_10589074
325 Ga0105249_10787400
326 Ga0105239_10047764
327 Ga0105239_10088456
328 Ga0163162_10242624
329 Ga0157375_10430016
330 Ga0157376_10132514
331 Ga0157376_10299490
332 Ga0214544_1000072
333 Ga0213874_10017637
334 Ga0213875_10001431
335 Ga0213871_10007183
336 Ga0209563_103035
337 Ga0209148_1000275
338 Ga0209233_1005419
339 Ga0209233_1005680
340 Ga0209233_1027725
341 Ga0209564_1004992
342 Ga0209758_1000546
343 Ga0209758_1004442
344 Ga0209758_1035261
345 Ga0209256_1005688
346 Ga0207426_1008211
347 Ga0207426_1010176
348 Ga0209257_1001004
349 Ga0207688_10235434
350 Ga0207647_10141057
351 Ga0207654_10026658
352 Ga0207695_10000107
353 Ga0207695_10294353
354 Ga0207671_10339118
355 Ga0207660_10268526
356 Ga0207681_10287320
357 Ga0207659_10006386
358 Ga0207644_10130122
359 Ga0207706_10085984
360 Ga0207691_10035791
361 Ga0207691_10533134
362 Ga0207679_10023451
363 Ga0207712_10374097
364 Ga0207668_10254731
365 Ga0209389_1000153
366 Ga0209589_1000098
367 Ga0209489_100283
368 Ga0209489_100936
369 Ga0209700_100011
370 Ga0209700_100299
371 Ga0268266_10070159
372 Ga0268266_10349808
373 Ga0268265_10067277
374 Ga0265338_10011497
375 Ga0265339_10000836
376 Ga0307414_10517883
377 Ga0307411_10519620
378 Ga0307510_10009621
379 Ga0373937_0282781
380 Ga0395905_0000042
381 Ga0436364_1097450
382 Ga0436363_0594211
383 Ga0451807_1330170
384 Ga0439442_007517
385 Ga0439449_0027790
386 Ga0466969_0002980
387 Ga0466972_0000214
388 Ga0466972_0005666
389 Ga0466966_0000209
390 Ga0466966_0032562
391 Ga0466961_0000110
392 Ga0466961_0102256
393 Ga0466964_0015935
394 Ga0453684_0001542
395 Ga0466968_0000951
396 Ga0466960_0022166
397 Ga0466959_0003995
398 Ga0466958_0088730
399 Ga0466967_0382634
400 Ga0495592_0018513
401 Ga0495592_0039275
402 Ga0495603_0073093
403 Ga0495603_0093591
404 Ga0495629_0104422
405 Ga0495651_0006859
406 Ga0495651_0099408
407 Ga0495580_0049723
408 Ga0495662_0000799
409 Ga0495664_0043565
410 Ga0495664_0138023
411 Ga0495585_0078389
412 Ga0495606_0038163
413 Ga0495608_0001341
414 Ga0495608_0012281
415 Ga0495616_0064605
416 Ga0495618_0119299
417 Ga0495628_0040606
418 Ga0495630_0195412
419 Ga0495632_0111528
420 Ga0495648_0000160
421 Ga0495648_0007591
422 Ga0495666_0071059
423 Ga0495652_0024498
424 Ga0495652_0043136
425 Ga0495652_0066938
426 Ga0495652_0472988
427 Ga0495665_0059980
428 Ga0495640_0037121
429 Ga0495586_0027781
430 Ga0495587_0016285
431 Ga0495587_0185779
432 Ga0495597_0178287
433 Ga0495645_0011155
434 Ga0495645_0026995
435 Ga0495622_0018922
436 Ga0495667_0003759
437 Ga0495667_0034361
438 Ga0495634_0022666
439 Ga0495634_0069342
440 Ga0495635_0026946
441 Ga0495635_0397619
442 Ga0495657_0008309
443 Ga0495657_0016912
444 Ga0495657_0041954
445 Ga0495657_0082641
446 Ga0495599_0313268
447 Ga0495623_0362297
448 Ga0495646_0050174
449 Ga0495646_0101166
450 Ga0495613_0059214
451 Ga0495613_0287902
452 Ga0495624_0092806
453 Ga0495649_0036800
454 Ga0495600_0119216
455 Ga0495604_0000573
456 Ga0495604_0022104
457 Ga0495604_0089022
458 Ga0495676_0006714
459 Ga0495676_0122645
460 Ga0495680_0014667
461 Ga0495683_0038343
462 Ga0495687_074329
463 Ga0495675_0002868
464 Ga0495675_0003014
465 Ga0495673_0050723
466 Ga0495684_0011087
467 Ga0495593_0015901
468 Ga0495593_0140826
469 Ga0495602_0006250
470 Ga0495602_0094502
471 Ga0495602_0128958
472 Ga0496101_0378060
473 Ga0496103_0382209
474 Ga0496104_0007130
475 Ga0496105_0025607
476 Ga0496107_0073616
477 Ga0496110_0759678
478 Ga0496112_0190327
479 Ga0496113_0167009
480 Ga0496114_0131966
481 Ga0496114_0373632
482 Ga0496116_0074485
483 Ga0496117_0058970
484 Ga0496117_0175657
485 Ga0496118_0166211
486 Ga0496119_0023419
487 Ga0496119_0099626
488 Ga0496120_0018079
489 Ga0496120_0041600
490 Ga0496124_0275792
491 Ga0496126_0220092
492 Ga0495682_0008635
493 Ga0501031_0020681
494 Ga0501031_0073480
495 Ga0501032_0022612
496 Ga0501033_0124758
497 Ga0501034_0457462
498 Ga0501037_0115156
499 Ga0501038_0212611
500 Ga0501046_0144802
501 Ga0501047_0000005
502 Ga0501047_0035167
503 Ga0501047_0042586
504 Ga0501070_0205488
505 Ga0501083_0004346
506 Ga0501282_011410
507 Ga0501035_0014770
508 Ga0501035_0124776
509 Ga0501044_0249485
510 Ga0501044_0972629
511 nmdc:mga06z11_113441_c1
512 nmdc:mga0sz30_21024_c2
513 Ga0495601_0237966
514 Ga0495612_0045482
515 Ga0495619_0052740
516 Ga0495619_0054598
517 Ga0500643_000049
518 Ga0500583_0036998
519 Ga0500566_0044762
520 Ga0500640_120326
521 Ga0500555_095000
522 Ga0500592_010400
523 Ga0500642_0027803
524 Ga0500652_120809
525 Ga0500559_0009737
526 Ga0500568_0073714
527 Ga0500577_0050005
528 Ga0500620_012569
529 Ga0500634_0157309
530 Ga0500636_0002161
531 Ga0500661_027113
532 2513639836
533 2513873614
534 2513889585
535 2745081596
536 2805915698
537 2824606103
538 2824612239
539 2824677563
540 2824699070
541 2841965933
542 2841972573
543 2844315209
544 2847942066
545 2849082953
546 2874628895
547 2876809444
548 2879116674
549 2888390763
550 2903732109
551 2906603158
552 2906633380
553 2908776168
554 2912730647
555 2912762273
556 2919470384
557 2922398933
558 2932794404
559 2932806688
560 2935888459
561 2941535598
562 3005593160
563 3005710912
564 3005718214
565 3006397727
566 8006928561
567 8016586471
568 8019652574
569 8056877979
570 8056971201

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

111

219

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

111

229

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rku-assembly1.cif.gz_D substrate fingerprint and the structure of nadp+ dependent serine dehydrogenase from saccharomyces cerevisiae complexed with nadp+ 0.9183 4 221
7e6o-assembly1.cif.gz_C crystal structure of polyol dehydrogenase from paracoccus denitrificans 0.9183 5 188
4cqm-assembly1.cif.gz_J crystal structure of heterotetrameric human ketoacyl reductase complexed with nad and nadp 0.9123 5 229
1k2w-assembly1.cif.gz_A crystal structure of sorbitol dehydrogenase from r. sphaeroides 0.9084 5 191
1w4z-assembly1.cif.gz_B-2 structure of actinorhodin polyketide (actiii) reductase 0.908 1 213
ID Description Score Start End Superfamily
af_P9WGR3_8_247_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.946 7 243 3.40.50.720
af_P9WGR3_8_247_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9307 7 243 3.40.50.720
af_P95150_9_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9222 5 244 3.40.50.720
af_O15229_1_369_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9205 1 34 3.50.50.60
af_Q10782_3_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9187 2 239 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A382N7W7-F1-model_v4 Uncharacterized protein 0.9962 34 174 GO:0016020
GO:0016491
AF-A0A5C2M7D3-F1-model_v4 SDR family oxidoreductase 0.9934 4 246 GO:0016020
GO:0016491
AF-A0A257W400-F1-model_v4 Short-chain dehydrogenase 0.993 5 162
AF-A0A1M7AHD6-F1-model_v4 Short-chain dehydrogenase 0.9915 5 246 GO:0016020
GO:0016491
AF-A0A6N9BZN4-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9903 81 246 GO:0016020
GO:0016491

Map