F386219

General Info

Members Datasets Scaffolds Average Seq Length
284 149 284 530

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10001704|Ga0213876_100017045
Length 547
Sequence MMEAPTVFQRRIVIGAGVCVAAFVLVAIRLVDVTLIKVGGGESVSGPAVIARADLTDRNGELLARDLPVKDLYARPHEFWDKPQAAHDLAAATGADEDRLLAGFNNARHPYVLIARRITPGAEAKVMHLGLPGLEFEPASKRYYPDGRIAAQLLGVTDPDNNGVSGLEMGLQDRLRDAAARGDGAVATSIDSRVQYILAHEVAEARKTFSAHAAGGIVMDVKTGEILAMTSQPDFDPNQRKLEDGDSTRNIIAQDVYELGSIFKIFSFTLAFEDHTLKSLDEVFKIGQGLQIGKYTIHEAERMPATLAARDILAQSSNIGTSQIALRSGGARQREFLSSLGLLKPLKTVLPETARPLYPGANWGMIETATVSFGHGISVSPLSFVAAAASVINGGRQITPTFIRQPAGTDNRSVQVIKPETSAQMRDLLRYVVTNGTGRKADIPGYDVGGKTGSAQVPGPNGHYLAHALRTSFFAAFPVHNPRYVVFVLMDQPHGTKETGGFALAAYTAVPAAAHVIARIAPLLGVPNAPEPAKEAAKPAPVYGRSL

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
116 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
120 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
147 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.52
Nodule 0
Rhizoplane 0
Rhizosphere 92.96
Stem 0
Stem Tuber 0
Unclassified 3.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000008 3300003214 Bacteria 478603
2 Ga0070658_10019660 3300005327 Bacteria 5408
3 Ga0070658_10027552 3300005327 Bacteria 4558
4 Ga0070683_100048322 3300005329 Bacteria 3933
5 Ga0070666_10014845 3300005335 Bacteria 4963
6 Ga0070680_100000033 3300005336 Bacteria 70320
7 Ga0070680_100030604 3300005336 Bacteria 4325
8 Ga0070680_100037437 3300005336 Bacteria 3920
9 Ga0068868_100008352 3300005338 Bacteria 7412
10 Ga0070691_10002499 3300005341 Bacteria 8184
11 Ga0070673_100133154 3300005364 Unclassified 2089
12 Ga0070667_100041951 3300005367 Bacteria 3837
13 Ga0070709_10000425 3300005434 Bacteria 25583
14 Ga0070713_100000007 3300005436 Bacteria 186402
15 Ga0070711_100025075 3300005439 Bacteria 3897
16 Ga0070678_100020103 3300005456 Bacteria 4374
17 Ga0070678_100026715 3300005456 Bacteria 3908
18 Ga0070681_10000002 3300005458 Bacteria 821814
19 Ga0070681_10101285 3300005458 Bacteria 2826
20 Ga0068867_100002010 3300005459 Bacteria 14200
21 Ga0070679_100000132 3300005530 Bacteria 59984
22 Ga0070679_100020525 3300005530 Bacteria 6442
23 Ga0070679_100138952 3300005530 Bacteria 2410
24 Ga0068853_100000268 3300005539 Bacteria 36709
25 Ga0068853_100009726 3300005539 Bacteria 7756
26 Ga0068853_100010936 3300005539 Bacteria 7356
27 Ga0070665_100005488 3300005548 Bacteria 13067
28 Ga0070665_100012171 3300005548 Bacteria 8674
29 Ga0070665_100080774 3300005548 Bacteria 3257
30 Ga0070665_100176516 3300005548 Bacteria 2137
31 Ga0068855_100020954 3300005563 Bacteria 7839
32 Ga0068855_100043089 3300005563 Bacteria 5347
33 Ga0068855_100134916 3300005563 Bacteria 2816
34 Ga0068855_100136752 3300005563 Bacteria 2795
35 Ga0068857_100023693 3300005577 Bacteria 5404
36 Ga0068856_100001033 3300005614 Bacteria 29595
37 Ga0068856_100005319 3300005614 Bacteria 12709
38 Ga0068856_100050533 3300005614 Bacteria 4099
39 Ga0068852_100069476 3300005616 Unclassified 3087
40 Ga0068852_100221875 3300005616 Bacteria 1798
41 Ga0068859_100069253 3300005617 Bacteria 3563
42 Ga0068863_100012044 3300005841 Bacteria 8356
43 Ga0068858_100015466 3300005842 Bacteria 7177
44 Ga0070712_100000771 3300006175 Bacteria 18893
45 Ga0070712_100012461 3300006175 Bacteria 5406
46 Ga0097621_100001594 3300006237 Bacteria 15517
47 Ga0068871_100000187 3300006358 Bacteria 42079
48 Ga0068871_100032483 3300006358 Bacteria 4124
49 Ga0068871_100073385 3300006358 Bacteria 2821
50 Ga0075428_100159959 3300006844 Bacteria 2445
51 Ga0068865_100002404 3300006881 Bacteria 11044
52 Ga0075436_100000024 3300006914 Bacteria 115057
53 Ga0075436_100007694 3300006914 Bacteria 7361
54 Ga0075436_100041147 3300006914 Bacteria 3189
55 Ga0097620_100069252 3300006931 Bacteria 3563
56 Ga0105240_10000582 3300009093 Bacteria 67645
57 Ga0105240_10005535 3300009093 Bacteria 18812
58 Ga0105240_10008320 3300009093 Bacteria 14846
59 Ga0105240_10029919 3300009093 Bacteria 7086
60 Ga0105240_10109764 3300009093 Bacteria 3340
61 Ga0105245_10016978 3300009098 Bacteria 6353
62 Ga0105241_10006774 3300009174 Bacteria 8431
63 Ga0105241_10067535 3300009174 Bacteria 2767
64 Ga0105241_10104520 3300009174 Unclassified 2257
65 Ga0105242_10039820 3300009176 Bacteria 3784
66 Ga0105248_10000015 3300009177 Bacteria 322959
67 Ga0105248_10013044 3300009177 Bacteria 9160
68 Ga0105237_10015519 3300009545 Bacteria 7925
69 Ga0105237_10064659 3300009545 Bacteria 3654
70 Ga0105238_10001006 3300009551 Bacteria 28764
71 Ga0105238_10030822 3300009551 Bacteria 5458
72 Ga0105238_10040094 3300009551 Bacteria 4747
73 Ga0105238_10162204 3300009551 Bacteria 2211
74 Ga0105238_10180306 3300009551 Bacteria 2089
75 Ga0105238_10223033 3300009551 Bacteria 1861
76 Ga0105249_10114175 3300009553 Unclassified 2557
77 Ga0105239_10074244 3300010375 Bacteria 3739
78 Ga0105239_10093133 3300010375 Bacteria 3327
79 Ga0105239_10098343 3300010375 Bacteria 3235
80 Ga0105239_10199655 3300010375 Bacteria 2240
81 Ga0105246_10035415 3300011119 Bacteria 3336
82 Ga0157370_10005161 3300013104 Bacteria 14724
83 Ga0157369_10011773 3300013105 Bacteria 9934
84 Ga0157369_10077403 3300013105 Bacteria 3564
85 Ga0157369_10226786 3300013105 Bacteria 1954
86 Ga0157378_10201149 3300013297 Bacteria 1884
87 Ga0163162_10042146 3300013306 Bacteria 4567
88 Ga0157372_10045006 3300013307 Bacteria 4893
89 Ga0157375_10022319 3300013308 Bacteria 5824
90 Ga0163163_10000150 3300014325 Bacteria 72638
91 Ga0163163_10027864 3300014325 Bacteria 5417
92 Ga0157379_10001081 3300014968 Bacteria 22242
93 Ga0157379_10002727 3300014968 Bacteria 14903
94 Ga0157379_10004054 3300014968 Bacteria 12495
95 Ga0157379_10010760 3300014968 Bacteria 7973
96 Ga0157379_10057922 3300014968 Bacteria 3463
97 Ga0157379_10077507 3300014968 Bacteria 2976
98 Ga0163161_10013800 3300017792 Bacteria 5627
99 Ga0213876_10001704 3300021384 Bacteria 13366
100 Ga0213876_10002380 3300021384 Bacteria 11072
101 Ga0209233_1000006 3300025261 Bacteria 1473685
102 Ga0209233_1006955 3300025261 Bacteria 3614
103 Ga0209455_1010303 3300025272 Bacteria 2386
104 Ga0209758_1000032 3300025297 Bacteria 481623
105 Ga0207699_10000188 3300025906 Bacteria 37593
106 Ga0207705_10010091 3300025909 Bacteria 6876
107 Ga0207707_10000002 3300025912 Bacteria 1142054
108 Ga0207707_10078074 3300025912 Bacteria 2891
109 Ga0207695_10000004 3300025913 Bacteria 1288665
110 Ga0207695_10003813 3300025913 Bacteria 20893
111 Ga0207695_10012101 3300025913 Bacteria 10371
112 Ga0207695_10015692 3300025913 Bacteria 8910
113 Ga0207695_10019234 3300025913 Bacteria 7865
114 Ga0207695_10026315 3300025913 Bacteria 6494
115 Ga0207695_10028971 3300025913 Bacteria 6128
116 Ga0207695_10075315 3300025913 Bacteria 3434
117 Ga0207671_10025169 3300025914 Bacteria 4472
118 Ga0207693_10000349 3300025915 Bacteria 42666
119 Ga0207693_10002656 3300025915 Bacteria 15531
120 Ga0207663_10021204 3300025916 Bacteria 3696
121 Ga0207660_10000010 3300025917 Bacteria 92859
122 Ga0207660_10015232 3300025917 Bacteria 5072
123 Ga0207660_10039484 3300025917 Bacteria 3300
124 Ga0207657_10008311 3300025919 Bacteria 10562
125 Ga0207657_10028915 3300025919 Bacteria 5050
126 Ga0207649_10047712 3300025920 Bacteria 2638
127 Ga0207652_10000053 3300025921 Bacteria 118700
128 Ga0207694_10000015 3300025924 Bacteria 363898
129 Ga0207694_10044269 3300025924 Bacteria 3437
130 Ga0207700_10000014 3300025928 Bacteria 229475
131 Ga0207704_10034164 3300025938 Bacteria 2899
132 Ga0207711_10000003 3300025941 Bacteria 1042791
133 Ga0207711_10000005 3300025941 Bacteria 822972
134 Ga0207711_10000009 3300025941 Bacteria 580864
135 Ga0207689_10015014 3300025942 Bacteria 6568
136 Ga0207689_10071766 3300025942 Unclassified 2844
137 Ga0207661_10153451 3300025944 Unclassified 1993
138 Ga0207667_10000226 3300025949 Bacteria 79075
139 Ga0207667_10020312 3300025949 Bacteria 7393
140 Ga0207667_10094518 3300025949 Bacteria 3086
141 Ga0207651_10096525 3300025960 Unclassified 2180
142 Ga0207640_10051077 3300025981 Bacteria 2686
143 Ga0207658_10016551 3300025986 Bacteria 5074
144 Ga0207677_10005794 3300026023 Bacteria 6719
145 Ga0207703_10046117 3300026035 Bacteria 3509
146 Ga0207639_10000349 3300026041 Bacteria 31906
147 Ga0207639_10029786 3300026041 Bacteria 4000
148 Ga0207702_10000011 3300026078 Bacteria 284514
149 Ga0207702_10007401 3300026078 Bacteria 9370
150 Ga0207648_10021744 3300026089 Bacteria 5764
151 Ga0207648_10087615 3300026089 Bacteria 2717
152 Ga0207648_10146910 3300026089 Bacteria 2080
153 Ga0207674_10000002 3300026116 Bacteria 279738
154 Ga0207683_10034168 3300026121 Bacteria 4418
155 Ga0268266_10001115 3300028379 Bacteria 33566
156 Ga0268266_10007220 3300028379 Bacteria 10048
157 Ga0268266_10021691 3300028379 Bacteria 5473
158 Ga0268266_10025537 3300028379 Bacteria 5025
159 Ga0268264_10087193 3300028381 Bacteria 2683
160 Ga0265318_10000025 3300028577 Bacteria 159237
161 Ga0265318_10006245 3300028577 Bacteria 5507
162 Ga0265338_10000007 3300028800 Bacteria 498229
163 Ga0265338_10013206 3300028800 Bacteria 9347
164 Ga0265338_10032459 3300028800 Bacteria 5093
165 Ga0265338_10097663 3300028800 Bacteria 2405
166 Ga0265330_10009181 3300031235 Bacteria 4712
167 Ga0265332_10005687 3300031238 Bacteria 5730
168 Ga0265332_10007815 3300031238 Bacteria 4828
169 Ga0265332_10030413 3300031238 Bacteria 2359
170 Ga0265320_10000209 3300031240 Bacteria 47757
171 Ga0265320_10035109 3300031240 Bacteria 2544
172 Ga0265325_10000001 3300031241 Bacteria 726814
173 Ga0265325_10000451 3300031241 Bacteria 29659
174 Ga0265325_10004278 3300031241 Bacteria 9054
175 Ga0265340_10000052 3300031247 Bacteria 54270
176 Ga0265340_10000319 3300031247 Bacteria 25435
177 Ga0265339_10001432 3300031249 Bacteria 17696
178 Ga0265339_10002951 3300031249 Bacteria 12022
179 Ga0265339_10009082 3300031249 Bacteria 6281
180 Ga0265331_10002115 3300031250 Bacteria 13691
181 Ga0265331_10002902 3300031250 Bacteria 11329
182 Ga0265331_10012910 3300031250 Bacteria 4505
183 Ga0265331_10019124 3300031250 Bacteria 3540
184 Ga0265331_10022977 3300031250 Bacteria 3175
185 Ga0265316_10012567 3300031344 Bacteria 7583
186 Ga0265316_10018546 3300031344 Bacteria 5976
187 Ga0265316_10024255 3300031344 Bacteria 5088
188 Ga0265316_10132410 3300031344 Bacteria 1877
189 Ga0265316_10135685 3300031344 Unclassified 1851
190 Ga0307513_10149996 3300031456 Bacteria 2242
191 Ga0265313_10000650 3300031595 Bacteria 35724
192 Ga0265313_10001440 3300031595 Bacteria 22235
193 Ga0265313_10001587 3300031595 Bacteria 21094
194 Ga0265313_10001684 3300031595 Bacteria 20414
195 Ga0265313_10011626 3300031595 Bacteria 5457
196 Ga0265314_10018585 3300031711 Bacteria 5415
197 Ga0265314_10026331 3300031711 Bacteria 4371
198 Ga0265314_10037964 3300031711 Bacteria 3484
199 Ga0265314_10066086 3300031711 Bacteria 2440
200 Ga0265314_10104535 3300031711 Bacteria 1813
201 Ga0265342_10021142 3300031712 Bacteria 4161
202 Ga0265342_10037689 3300031712 Bacteria 2947
203 Ga0307516_10008477 3300031730 Bacteria 11623
204 Ga0373955_0002238 3300035172 Bacteria 8401
205 Ga0373931_0031320 3300035691 Bacteria 2745
206 Ga0373935_0054178 3300035692 Bacteria 2553
207 Ga0373933_0012128 3300035724 Bacteria 4759
208 Ga0373933_0044886 3300035724 Bacteria 2619
209 Ga0373937_0004280 3300036401 Bacteria 12093
210 Ga0395899_0068274 3300037312 Bacteria 2607
211 Ga0395901_0032465 3300038443 Bacteria 5387
212 Ga0395901_0061638 3300038443 Bacteria 3903
213 Ga0436365_0274668 3300039437 Bacteria 5579
214 Ga0436365_1159256 3300039437 Bacteria 23999
215 Ga0436365_1797404 3300039437 Bacteria 129057
216 Ga0436363_0215436 3300039450 Bacteria 12449
217 Ga0495580_0106146 3300046472 Bacteria 1951
218 Ga0495664_0017281 3300046477 Bacteria 4122
219 Ga0495664_0065686 3300046477 Unclassified 2163
220 Ga0495587_0014488 3300046536 Bacteria 4944
221 Ga0495609_0003969 3300046538 Bacteria 8278
222 Ga0495645_0043349 3300046543 Bacteria 3282
223 Ga0495622_0046599 3300046557 Unclassified 2014
224 Ga0495624_0083179 3300046690 Unclassified 1980
225 Ga0496121_0000701 3300048924 Bacteria 62310
226 Ga0496126_0000406 3300048929 Bacteria 87599
227 Ga0495682_0000834 3300049460 Bacteria 19318
228 Ga0501033_0021952 3300049570 Bacteria 4815
229 Ga0501033_0026645 3300049570 Bacteria 4349
230 Ga0501034_0090265 3300049571 Bacteria 3062
231 Ga0501037_0016569 3300049573 Bacteria 5423
232 Ga0501037_0023881 3300049573 Bacteria 4522
233 Ga0501038_0028464 3300049574 Bacteria 4964
234 Ga0501039_0005729 3300049575 Bacteria 9412
235 Ga0501042_0038887 3300049578 Bacteria 3379
236 Ga0501043_0009572 3300049579 Bacteria 7596
237 Ga0501043_0025279 3300049579 Bacteria 4658
238 Ga0501046_0005080 3300049580 Bacteria 11799
239 Ga0501046_0050905 3300049580 Bacteria 3271
240 Ga0501046_0077143 3300049580 Bacteria 2580
241 Ga0501047_0009275 3300049581 Bacteria 9294
242 Ga0501047_0010846 3300049581 Bacteria 8613
243 Ga0501047_0014040 3300049581 Bacteria 7611
244 Ga0501047_0031065 3300049581 Bacteria 5151
245 Ga0501047_0047193 3300049581 Bacteria 4161
246 Ga0501047_0086753 3300049581 Bacteria 3007
247 Ga0501047_0087453 3300049581 Bacteria 2994
248 Ga0501048_0006440 3300049582 Bacteria 8923
249 Ga0501067_0001834 3300049583 Bacteria 11678
250 Ga0501067_0002326 3300049583 Bacteria 10506
251 Ga0501069_0010317 3300049585 Bacteria 4944
252 Ga0501070_0047747 3300049586 Bacteria 3557
253 Ga0501072_0008795 3300049588 Bacteria 7668
254 Ga0501073_0002703 3300049589 Bacteria 13275
255 Ga0501073_0019776 3300049589 Bacteria 4859
256 Ga0501073_0060548 3300049589 Bacteria 2642
257 Ga0501074_0005979 3300049590 Bacteria 8779
258 Ga0501079_0017428 3300049741 Bacteria 5485
259 Ga0501080_0045669 3300049742 Bacteria 4077
260 Ga0501080_0051751 3300049742 Bacteria 3823
261 Ga0501080_0081220 3300049742 Bacteria 3012
262 Ga0501083_0000426 3300049744 Bacteria 27116
263 Ga0501083_0019125 3300049744 Bacteria 4770
264 Ga0501035_0003779 3300049822 Bacteria 14432
265 Ga0501035_0014290 3300049822 Bacteria 7329
266 Ga0501035_0019362 3300049822 Bacteria 6262
267 Ga0501035_0087427 3300049822 Bacteria 2747
268 Ga0501035_0108906 3300049822 Bacteria 2428
269 Ga0501035_0112637 3300049822 Bacteria 2384
270 Ga0501044_0008013 3300049823 Bacteria 11609
271 Ga0501044_0009729 3300049823 Bacteria 10460
272 Ga0501044_0010182 3300049823 Bacteria 10213
273 Ga0501044_0049132 3300049823 Bacteria 4355
274 Ga0501044_0198007 3300049823 Bacteria 1968
275 nmdc:mga0n895_82334_c1 3300050512 Bacteria 3208
276 nmdc:mga08x19_86_c1 3300050514 Bacteria 83486
277 Ga0500643_000008 3300053087 Bacteria 457931
278 Ga0500595_003953 3300053119 Bacteria 6774
279 Ga0500573_0000062 3300053140 Bacteria 67407
280 Ga0500619_001333 3300053154 Bacteria 4333
281 Ga0500639_007815 3300053163 Bacteria 5562
282 Ga0501084_0000074 3300054114 Bacteria 72522
283 Ga0501084_0010338 3300054114 Bacteria 7722
284 Ga0501082_0033995 3300060353 Bacteria 4397

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300039450 Ga0436363_0215436 Ga0436363_0215436_9538_10965 444
2 3300049581 Ga0501047_0031065 Ga0501047_0031065_15_1445 454
3 3300049822 Ga0501035_0112637 Ga0501035_0112637_879_2354 465
4 3300031344 Ga0265316_10132410 Ga0265316_101324102 490
5 3300031240 Ga0265320_10035109 Ga0265320_100351092 491
6 3300048924 Ga0496121_0000701 Ga0496121_0000701_15953_17560 491
7 3300053163 Ga0500639_007815 Ga0500639_007815_2786_4396 491
8 3300049581 Ga0501047_0009275 Ga0501047_0009275_52_1620 494
9 3300049823 Ga0501044_0198007 Ga0501044_0198007_43_1611 494
10 3300028577 Ga0265318_10000025 Ga0265318_10000025140 496
11 3300013105 Ga0157369_10077403 Ga0157369_100774033 499
12 3300005539 Ga0068853_100000268 Ga0068853_10000026837 500
13 3300026041 Ga0207639_10000349 Ga0207639_100003496 500
14 3300028800 Ga0265338_10000007 Ga0265338_1000000786 500
15 3300031241 Ga0265325_10000001 Ga0265325_10000001701 500
16 3300031249 Ga0265339_10001432 Ga0265339_1000143211 500
17 3300031250 Ga0265331_10002115 Ga0265331_100021153 500
18 3300031595 Ga0265313_10000650 Ga0265313_1000065024 500
19 3300046477 Ga0495664_0065686 Ga0495664_0065686_285_1877 500
20 3300046543 Ga0495645_0043349 Ga0495645_0043349_288_1880 500
21 3300053154 Ga0500619_001333 Ga0500619_001333_1249_2856 500
22 3300035172 Ga0373955_0002238 Ga0373955_0002238_1722_3323 501
23 3300046477 Ga0495664_0017281 Ga0495664_0017281_2218_3831 501
24 3300005539 Ga0068853_100009726 Ga0068853_1000097263 502
25 3300005563 Ga0068855_100020954 Ga0068855_1000209542 502
26 3300006844 Ga0075428_100159959 Ga0075428_1001599592 502
27 3300009093 Ga0105240_10000582 Ga0105240_1000058249 502
28 3300009551 Ga0105238_10030822 Ga0105238_100308226 502
29 3300010375 Ga0105239_10074244 Ga0105239_100742444 502
30 3300010375 Ga0105239_10199655 Ga0105239_101996552 502
31 3300025913 Ga0207695_10000004 Ga0207695_10000004151 502
32 3300025920 Ga0207649_10047712 Ga0207649_100477123 502
33 3300025924 Ga0207694_10000015 Ga0207694_10000015214 502
34 3300025949 Ga0207667_10000226 Ga0207667_1000022632 502
35 3300031241 Ga0265325_10004278 Ga0265325_100042783 502
36 3300031711 Ga0265314_10037964 Ga0265314_100379642 502
37 3300049460 Ga0495682_0000834 Ga0495682_0000834_9170_10771 502
38 3300005336 Ga0070680_100000033 Ga0070680_10000003316 503
39 3300005458 Ga0070681_10000002 Ga0070681_10000002203 503
40 3300005530 Ga0070679_100000132 Ga0070679_1000001328 503
41 3300010375 Ga0105239_10098343 Ga0105239_100983432 503
42 3300025912 Ga0207707_10000002 Ga0207707_10000002749 503
43 3300025917 Ga0207660_10000010 Ga0207660_1000001057 503
44 3300025921 Ga0207652_10000053 Ga0207652_1000005315 503
45 3300054114 Ga0501084_0000074 Ga0501084_0000074_45807_47393 503
46 3300031250 Ga0265331_10019124 Ga0265331_100191243 504
47 3300031344 Ga0265316_10135685 Ga0265316_101356852 504
48 3300039437 Ga0436365_0274668 Ga0436365_0274668_1205_2791 505
49 3300048929 Ga0496126_0000406 Ga0496126_0000406_27050_28666 505
50 3300049581 Ga0501047_0010846 Ga0501047_0010846_1873_3498 505
51 3300049583 Ga0501067_0002326 Ga0501067_0002326_3835_5460 505
52 3300049588 Ga0501072_0008795 Ga0501072_0008795_2173_3798 505
53 3300049589 Ga0501073_0019776 Ga0501073_0019776_2319_3944 505
54 3300005842 Ga0068858_100015466 Ga0068858_1000154664 506
55 3300009174 Ga0105241_10067535 Ga0105241_100675352 506
56 3300009177 Ga0105248_10000015 Ga0105248_10000015260 506
57 3300014968 Ga0157379_10001081 Ga0157379_1000108110 506
58 3300021384 Ga0213876_10002380 Ga0213876_100023808 506
59 3300025941 Ga0207711_10000003 Ga0207711_10000003868 506
60 3300025941 Ga0207711_10000005 Ga0207711_10000005266 506
61 3300025941 Ga0207711_10000009 Ga0207711_10000009390 506
62 3300028800 Ga0265338_10097663 Ga0265338_100976633 506
63 3300039437 Ga0436365_1797404 Ga0436365_1797404_47054_48655 506
64 3300005327 Ga0070658_10019660 Ga0070658_100196602 507
65 3300005548 Ga0070665_100080774 Ga0070665_1000807742 507
66 3300025919 Ga0207657_10008311 Ga0207657_1000831111 507
67 3300028800 Ga0265338_10032459 Ga0265338_100324593 507
68 3300031235 Ga0265330_10009181 Ga0265330_100091812 507
69 3300031238 Ga0265332_10007815 Ga0265332_100078156 507
70 3300031241 Ga0265325_10000451 Ga0265325_1000045111 507
71 3300031247 Ga0265340_10000052 Ga0265340_1000005224 507
72 3300031247 Ga0265340_10000319 Ga0265340_1000031917 507
73 3300031249 Ga0265339_10002951 Ga0265339_100029517 507
74 3300031249 Ga0265339_10009082 Ga0265339_100090824 507
75 3300031344 Ga0265316_10012567 Ga0265316_1001256710 507
76 3300031344 Ga0265316_10018546 Ga0265316_100185464 507
77 3300031344 Ga0265316_10024255 Ga0265316_100242552 507
78 3300031595 Ga0265313_10001684 Ga0265313_100016846 507
79 3300031595 Ga0265313_10011626 Ga0265313_100116262 507
80 3300031711 Ga0265314_10066086 Ga0265314_100660862 507
81 3300031712 Ga0265342_10021142 Ga0265342_100211422 507
82 3300006175 Ga0070712_100012461 Ga0070712_1000124612 508
83 3300014968 Ga0157379_10057922 Ga0157379_100579224 508
84 3300025915 Ga0207693_10000349 Ga0207693_1000034937 508
85 3300025944 Ga0207661_10153451 Ga0207661_101534511 508
86 3300035724 Ga0373933_0044886 Ga0373933_0044886_805_2403 508
87 3300036401 Ga0373937_0004280 Ga0373937_0004280_4147_5745 508
88 3300046472 Ga0495580_0106146 Ga0495580_0106146_321_1919 508
89 3300005341 Ga0070691_10002499 Ga0070691_100024993 509
90 3300005434 Ga0070709_10000425 Ga0070709_1000042513 509
91 3300005436 Ga0070713_100000007 Ga0070713_100000007175 509
92 3300005439 Ga0070711_100025075 Ga0070711_1000250753 509
93 3300005539 Ga0068853_100010936 Ga0068853_1000109366 509
94 3300005563 Ga0068855_100043089 Ga0068855_1000430893 509
95 3300005577 Ga0068857_100023693 Ga0068857_1000236932 509
96 3300005614 Ga0068856_100001033 Ga0068856_10000103313 509
97 3300005614 Ga0068856_100005319 Ga0068856_1000053194 509
98 3300006175 Ga0070712_100000771 Ga0070712_1000007715 509
99 3300006914 Ga0075436_100000024 Ga0075436_10000002429 509
100 3300006914 Ga0075436_100007694 Ga0075436_1000076946 509
101 3300006914 Ga0075436_100041147 Ga0075436_1000411473 509
102 3300009093 Ga0105240_10005535 Ga0105240_1000553513 509
103 3300009093 Ga0105240_10008320 Ga0105240_100083207 509
104 3300009545 Ga0105237_10015519 Ga0105237_100155195 509
105 3300009551 Ga0105238_10001006 Ga0105238_1000100621 509
106 3300010375 Ga0105239_10093133 Ga0105239_100931332 509
107 3300013104 Ga0157370_10005161 Ga0157370_1000516110 509
108 3300013105 Ga0157369_10011773 Ga0157369_100117735 509
109 3300014968 Ga0157379_10004054 Ga0157379_100040544 509
110 3300025906 Ga0207699_10000188 Ga0207699_1000018828 509
111 3300025913 Ga0207695_10003813 Ga0207695_1000381315 509
112 3300025913 Ga0207695_10012101 Ga0207695_100121019 509
113 3300025914 Ga0207671_10025169 Ga0207671_100251693 509
114 3300025915 Ga0207693_10002656 Ga0207693_100026565 509
115 3300025916 Ga0207663_10021204 Ga0207663_100212044 509
116 3300025928 Ga0207700_10000014 Ga0207700_1000001447 509
117 3300025949 Ga0207667_10020312 Ga0207667_100203126 509
118 3300025949 Ga0207667_10094518 Ga0207667_100945184 509
119 3300025981 Ga0207640_10051077 Ga0207640_100510772 509
120 3300025986 Ga0207658_10016551 Ga0207658_100165515 509
121 3300026041 Ga0207639_10029786 Ga0207639_100297863 509
122 3300026078 Ga0207702_10000011 Ga0207702_10000011272 509
123 3300026078 Ga0207702_10007401 Ga0207702_100074015 509
124 3300026116 Ga0207674_10000002 Ga0207674_10000002267 509
125 3300031240 Ga0265320_10000209 Ga0265320_1000020931 509
126 3300031711 Ga0265314_10018585 Ga0265314_100185853 509
127 3300031711 Ga0265314_10026331 Ga0265314_100263313 509
128 3300031711 Ga0265314_10104535 Ga0265314_101045351 509
129 3300035691 Ga0373931_0031320 Ga0373931_0031320_982_2583 509
130 3300035692 Ga0373935_0054178 Ga0373935_0054178_93_1694 509
131 3300035724 Ga0373933_0012128 Ga0373933_0012128_1437_3038 509
132 3300050512 nmdc:mga0n895_82334_c1 nmdc:mga0n895_82334_c1_1340_2941 509
133 3300050514 nmdc:mga08x19_86_c1 nmdc:mga08x19_86_c1_68193_69794 509
134 3300005336 Ga0070680_100037437 Ga0070680_1000374372 511
135 3300005458 Ga0070681_10101285 Ga0070681_101012853 511
136 3300005548 Ga0070665_100176516 Ga0070665_1001765161 511
137 3300009093 Ga0105240_10029919 Ga0105240_100299195 511
138 3300009093 Ga0105240_10109764 Ga0105240_101097643 511
139 3300009551 Ga0105238_10162204 Ga0105238_101622041 511
140 3300009551 Ga0105238_10180306 Ga0105238_101803062 511
141 3300009551 Ga0105238_10223033 Ga0105238_102230332 511
142 3300013105 Ga0157369_10226786 Ga0157369_102267862 511
143 3300025913 Ga0207695_10015692 Ga0207695_100156924 511
144 3300025913 Ga0207695_10019234 Ga0207695_100192345 511
145 3300025913 Ga0207695_10026315 Ga0207695_100263155 511
146 3300025917 Ga0207660_10039484 Ga0207660_100394842 511
147 3300025924 Ga0207694_10044269 Ga0207694_100442692 511
148 3300026089 Ga0207648_10087615 Ga0207648_100876153 511
149 3300028379 Ga0268266_10025537 Ga0268266_100255374 511
150 3300031250 Ga0265331_10012910 Ga0265331_100129103 511
151 3300037312 Ga0395899_0068274 Ga0395899_0068274_805_2409 511
152 3300038443 Ga0395901_0032465 Ga0395901_0032465_1041_2645 511
153 3300046536 Ga0495587_0014488 Ga0495587_0014488_1572_3176 511
154 3300049570 Ga0501033_0026645 Ga0501033_0026645_2381_4003 511
155 3300049581 Ga0501047_0014040 Ga0501047_0014040_2938_4560 511
156 3300049581 Ga0501047_0086753 Ga0501047_0086753_581_2203 511
157 3300049589 Ga0501073_0060548 Ga0501073_0060548_455_2077 511
158 3300049742 Ga0501080_0051751 Ga0501080_0051751_269_1891 511
159 3300049822 Ga0501035_0087427 Ga0501035_0087427_389_1993 511
160 3300049823 Ga0501044_0009729 Ga0501044_0009729_8360_9964 511
161 3300053087 Ga0500643_000008 Ga0500643_000008_369297_370916 511
162 3300028577 Ga0265318_10006245 Ga0265318_100062453 512
163 3300031238 Ga0265332_10030413 Ga0265332_100304132 512
164 3300031250 Ga0265331_10002902 Ga0265331_100029028 512
165 3300031456 Ga0307513_10149996 Ga0307513_101499962 512
166 3300031595 Ga0265313_10001440 Ga0265313_1000144012 512
167 3300031730 Ga0307516_10008477 Ga0307516_100084774 512
168 3300049822 Ga0501035_0014290 Ga0501035_0014290_1515_3128 512
169 3300005335 Ga0070666_10014845 Ga0070666_100148453 513
170 3300005338 Ga0068868_100008352 Ga0068868_1000083525 513
171 3300005364 Ga0070673_100133154 Ga0070673_1001331542 513
172 3300005367 Ga0070667_100041951 Ga0070667_1000419513 513
173 3300005456 Ga0070678_100020103 Ga0070678_1000201032 513
174 3300005456 Ga0070678_100026715 Ga0070678_1000267153 513
175 3300005459 Ga0068867_100002010 Ga0068867_1000020109 513
176 3300005530 Ga0070679_100138952 Ga0070679_1001389523 513
177 3300005614 Ga0068856_100050533 Ga0068856_1000505333 513
178 3300005616 Ga0068852_100069476 Ga0068852_1000694762 513
179 3300005617 Ga0068859_100069253 Ga0068859_1000692533 513
180 3300006358 Ga0068871_100073385 Ga0068871_1000733851 513
181 3300006881 Ga0068865_100002404 Ga0068865_1000024043 513
182 3300006931 Ga0097620_100069252 Ga0097620_1000692523 513
183 3300009098 Ga0105245_10016978 Ga0105245_100169786 513
184 3300009174 Ga0105241_10006774 Ga0105241_100067744 513
185 3300009176 Ga0105242_10039820 Ga0105242_100398202 513
186 3300011119 Ga0105246_10035415 Ga0105246_100354152 513
187 3300013297 Ga0157378_10201149 Ga0157378_102011492 513
188 3300013306 Ga0163162_10042146 Ga0163162_100421463 513
189 3300013307 Ga0157372_10045006 Ga0157372_100450062 513
190 3300013308 Ga0157375_10022319 Ga0157375_100223194 513
191 3300014325 Ga0163163_10027864 Ga0163163_100278643 513
192 3300014968 Ga0157379_10010760 Ga0157379_100107604 513
193 3300014968 Ga0157379_10077507 Ga0157379_100775072 513
194 3300017792 Ga0163161_10013800 Ga0163161_100138003 513
195 3300025913 Ga0207695_10075315 Ga0207695_100753154 513
196 3300025938 Ga0207704_10034164 Ga0207704_100341643 513
197 3300025942 Ga0207689_10015014 Ga0207689_100150145 513
198 3300025960 Ga0207651_10096525 Ga0207651_100965252 513
199 3300026023 Ga0207677_10005794 Ga0207677_100057943 513
200 3300026035 Ga0207703_10046117 Ga0207703_100461172 513
201 3300026089 Ga0207648_10021744 Ga0207648_100217442 513
202 3300026089 Ga0207648_10146910 Ga0207648_101469102 513
203 3300026121 Ga0207683_10034168 Ga0207683_100341684 513
204 3300028381 Ga0268264_10087193 Ga0268264_100871933 513
205 3300031595 Ga0265313_10001587 Ga0265313_1000158710 513
206 3300046557 Ga0495622_0046599 Ga0495622_0046599_174_1778 513
207 3300046690 Ga0495624_0083179 Ga0495624_0083179_355_1959 513
208 3300049570 Ga0501033_0021952 Ga0501033_0021952_1265_2890 513
209 3300049571 Ga0501034_0090265 Ga0501034_0090265_796_2415 513
210 3300049573 Ga0501037_0016569 Ga0501037_0016569_2360_3979 513
211 3300049574 Ga0501038_0028464 Ga0501038_0028464_2270_3889 513
212 3300049575 Ga0501039_0005729 Ga0501039_0005729_2840_4459 513
213 3300049578 Ga0501042_0038887 Ga0501042_0038887_834_2453 513
214 3300049579 Ga0501043_0025279 Ga0501043_0025279_2773_4392 513
215 3300049580 Ga0501046_0005080 Ga0501046_0005080_5441_7060 513
216 3300049581 Ga0501047_0087453 Ga0501047_0087453_608_2227 513
217 3300049582 Ga0501048_0006440 Ga0501048_0006440_1743_3362 513
218 3300049583 Ga0501067_0001834 Ga0501067_0001834_4944_6563 513
219 3300049585 Ga0501069_0010317 Ga0501069_0010317_2102_3721 513
220 3300049586 Ga0501070_0047747 Ga0501070_0047747_964_2583 513
221 3300049589 Ga0501073_0002703 Ga0501073_0002703_10951_12570 513
222 3300049590 Ga0501074_0005979 Ga0501074_0005979_508_2127 513
223 3300049741 Ga0501079_0017428 Ga0501079_0017428_381_2000 513
224 3300049742 Ga0501080_0045669 Ga0501080_0045669_2078_3697 513
225 3300049742 Ga0501080_0081220 Ga0501080_0081220_501_2120 513
226 3300049744 Ga0501083_0000426 Ga0501083_0000426_966_2585 513
227 3300049744 Ga0501083_0019125 Ga0501083_0019125_1986_3593 513
228 3300049822 Ga0501035_0003779 Ga0501035_0003779_5078_6703 513
229 3300049822 Ga0501035_0108906 Ga0501035_0108906_139_1758 513
230 3300049823 Ga0501044_0008013 Ga0501044_0008013_7715_9340 513
231 3300049823 Ga0501044_0049132 Ga0501044_0049132_1909_3528 513
232 3300054114 Ga0501084_0010338 Ga0501084_0010338_5028_6647 513
233 3300060353 Ga0501082_0033995 Ga0501082_0033995_1455_3074 513
234 3300003214 JGI25165J46597_1000008 JGI25165J46597_1000008110 514
235 3300005327 Ga0070658_10027552 Ga0070658_100275525 514
236 3300005329 Ga0070683_100048322 Ga0070683_1000483223 514
237 3300005336 Ga0070680_100030604 Ga0070680_1000306042 514
238 3300005530 Ga0070679_100020525 Ga0070679_1000205255 514
239 3300005548 Ga0070665_100005488 Ga0070665_1000054885 514
240 3300005548 Ga0070665_100012171 Ga0070665_1000121712 514
241 3300005563 Ga0068855_100134916 Ga0068855_1001349163 514
242 3300005563 Ga0068855_100136752 Ga0068855_1001367522 514
243 3300005616 Ga0068852_100221875 Ga0068852_1002218752 514
244 3300005841 Ga0068863_100012044 Ga0068863_1000120446 514
245 3300006237 Ga0097621_100001594 Ga0097621_10000159413 514
246 3300006358 Ga0068871_100000187 Ga0068871_10000018732 514
247 3300006358 Ga0068871_100032483 Ga0068871_1000324834 514
248 3300009174 Ga0105241_10104520 Ga0105241_101045201 514
249 3300009177 Ga0105248_10013044 Ga0105248_100130448 514
250 3300009545 Ga0105237_10064659 Ga0105237_100646592 514
251 3300009551 Ga0105238_10040094 Ga0105238_100400943 514
252 3300009553 Ga0105249_10114175 Ga0105249_101141752 514
253 3300014325 Ga0163163_10000150 Ga0163163_1000015021 514
254 3300014968 Ga0157379_10002727 Ga0157379_1000272711 514
255 3300021384 Ga0213876_10001704 Ga0213876_100017045 514
256 3300025261 Ga0209233_1000006 Ga0209233_10000061058 514
257 3300025261 Ga0209233_1006955 Ga0209233_10069554 514
258 3300025272 Ga0209455_1010303 Ga0209455_10103032 514
259 3300025297 Ga0209758_1000032 Ga0209758_1000032354 514
260 3300025909 Ga0207705_10010091 Ga0207705_100100913 514
261 3300025912 Ga0207707_10078074 Ga0207707_100780742 514
262 3300025913 Ga0207695_10028971 Ga0207695_100289712 514
263 3300025917 Ga0207660_10015232 Ga0207660_100152325 514
264 3300025919 Ga0207657_10028915 Ga0207657_100289155 514
265 3300025942 Ga0207689_10071766 Ga0207689_100717662 514
266 3300028379 Ga0268266_10001115 Ga0268266_1000111524 514
267 3300028379 Ga0268266_10007220 Ga0268266_100072206 514
268 3300028379 Ga0268266_10021691 Ga0268266_100216912 514
269 3300028800 Ga0265338_10013206 Ga0265338_100132063 514
270 3300031238 Ga0265332_10005687 Ga0265332_100056874 514
271 3300031250 Ga0265331_10022977 Ga0265331_100229772 514
272 3300031712 Ga0265342_10037689 Ga0265342_100376892 514
273 3300038443 Ga0395901_0061638 Ga0395901_0061638_629_2236 514
274 3300039437 Ga0436365_1159256 Ga0436365_1159256_16407_18089 514
275 3300046538 Ga0495609_0003969 Ga0495609_0003969_3602_5218 514
276 3300049573 Ga0501037_0023881 Ga0501037_0023881_2389_3999 514
277 3300049579 Ga0501043_0009572 Ga0501043_0009572_5148_6758 514
278 3300049580 Ga0501046_0050905 Ga0501046_0050905_243_1853 514
279 3300049580 Ga0501046_0077143 Ga0501046_0077143_14_1633 514
280 3300049581 Ga0501047_0047193 Ga0501047_0047193_2126_3745 514
281 3300049822 Ga0501035_0019362 Ga0501035_0019362_4102_5712 514
282 3300049823 Ga0501044_0010182 Ga0501044_0010182_2065_3675 514
283 3300053119 Ga0500595_003953 Ga0500595_003953_4281_5891 514
284 3300053140 Ga0500573_0000062 Ga0500573_0000062_34249_35865 514

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

214

511

0.92

PF03717

PBP_dimer

Penicillin-binding Protein dimerisation domain

48

178

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6r42-assembly1.cif.gz_A structure of r504c mutant of pseudomonas aeruginosa penicillin-binding protein 3 (pbp3) in complex with piperacillin 0.9054 50 507
3ocn-assembly1.cif.gz_A crystal structure of penicillin-binding protein 3 from pseudomonas aeruginosa in complex with ceftazidime 0.8948 50 502
3pbo-assembly1.cif.gz_A crystal structure of pbp3 complexed with ceftazidime 0.8929 50 506
7lc4-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa pbp3 in complex with gamma-lactam yu253911 0.8906 50 506
7ly1-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa pbp3 in complex with vaborbactam 0.8905 51 506
ID Description Score Start End Superfamily
3oc2A02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9307 186 502 3.30.450.330
5df7A02 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9109 185 503 3.40.710.10
3equB02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9104 186 505 3.30.450.330
3oc2A02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9023 186 502 3.30.450.330
3equB02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.8905 186 505 3.30.450.330
ID Description Score Start End GO Terms
AF-A0A4V1SIF8-F1-model_v4 Penicillin-binding protein 2 0.9636 282 502 GO:0005886
GO:0008658
GO:0071555
AF-A0A7V9N016-F1-model_v4 Penicillin-binding protein 2 0.9582 110 514 GO:0005886
GO:0008658
GO:0071555
AF-A0A850NYI1-F1-model_v4 Penicillin-binding protein 2 0.9484 387 506 GO:0005886
GO:0008658
GO:0071555
AF-A0A836QQU9-F1-model_v4 Penicillin-binding protein 2 0.9437 182 494 GO:0005886
GO:0008658
GO:0071555
AF-A0A6L8G6S7-F1-model_v4 Penicillin-binding protein 2 0.9388 252 503 GO:0005886
GO:0008658
GO:0071555

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pLDDT pTM Quality
89.15 0.83 High
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Predicted Structure (AlphaFold2)

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