F385851

General Info

Members Datasets Scaffolds Average Seq Length
283 197 208 598

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0001041|Ga0501034_0001041_7867_9777
Length 636
Sequence MRLTRRTEADGETLAVTRAEATAPATTTGAEAPTRAAPVLAVRGLTTSFRVDDRWVPVVRNVGFDIAPGETVAIVGESGSGKSVTSLSIMRLLQKETSRIEGSIQLGGRELLSLSGEEMRRVRGGDIAMIFQEPMTSLNPIFPIGMQIAEALVVHRRISEAEARAEVTRLLDKVRIPNAAARFDEYPHQFSGGMRQRVMIAMALASRPKLLIADEPTTALDVTIQGQILDLIKSLQDEENMAVLFITHDMGVVAEVSDRTLVMYRGETVETGSTDEIFNRGQHPYTRALLAAVPRLGSMKGRALPQRFPVIDVATGEASPPAEVADTVARTKAPVLDVRDLTTRFEVREGIFRRRRGAIHAVENVSFSLFEGETLALVGESGCGKSTTGRSLMRLVPPAGGDIIIDGHDVMELEGARLRTIRRSVQMIFQDPFASLNPRMSVGRAVTEPFIEHRLGTRAQARDKAAALLEKVSLSPDMMRRFPHEFSGGQRQRIAIARALMLDPKIIVADEAVSALDVSIKAQVCNLLLDLQQTLNLAYLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDDPQHPYTRKLMAAVPVPDPARRRLRRNMTSEEIHSPFRPVGYEPTPRTYREVSAGHFVRLD

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
3 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
4 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
5 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
6 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
7 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
8 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
9 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
10 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
11 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
12 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
13 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
14 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
15 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
16 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
17 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
18 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
19 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
20 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
21 2773857925 Microvirga vignae BR3299 Isolate Unclassified
22 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
23 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
24 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
25 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
26 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
27 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
28 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
29 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
30 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
31 2854911287 Brucella lupini LUP21 Isolate Unclassified
32 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
33 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
34 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
35 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
36 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
37 2876601092 Pantoea endophytica 596 Isolate Unclassified
38 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
39 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
40 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
41 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
42 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
43 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
44 2904504865 Serratia marcescens 1822 Isolate Unclassified
45 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
46 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
47 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
48 2919150387 Rahnella aceris 1817 Isolate Unclassified
49 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
50 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
51 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
52 2927143783 Rahnella sp. 2050 Isolate Unclassified
53 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
54 2932401849 Devosia sp. 2618 Isolate Rhizosphere
55 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
56 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
57 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
58 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
59 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
60 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
61 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
62 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
63 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
64 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
65 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
66 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
67 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
68 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
69 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
70 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
71 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
72 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
73 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
74 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
75 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
76 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
77 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
78 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
79 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
80 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
81 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
82 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
83 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
84 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
85 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
86 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
87 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
88 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
89 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
90 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
91 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
92 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
93 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
94 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
95 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
96 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
97 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
98 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
99 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
100 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
101 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
103 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
108 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
109 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
111 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
113 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
115 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
116 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
117 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
129 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
132 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
133 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
134 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
138 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
139 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
140 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
141 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
142 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
143 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
144 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
145 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
146 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
149 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
150 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
151 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
152 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
153 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
156 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
157 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
158 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
166 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
183 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
184 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
185 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
194 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
195 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
196 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
197 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 73.85
Metatranscriptomes 0
Isolates 26.15

Biome Distribution

Category Percentage (%)
Aerial Root 0.71
Bulb 0
Endosphere 21.2
Nodule 2.83
Rhizoplane 2.47
Rhizosphere 47
Stem 0
Stem Tuber 2.12
Unclassified 23.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000067 3300002737 Bacteria 129813
2 JGI25162J39368_1000478 3300002737 Bacteria 30707
3 JGI25163J39215_1000063 3300002771 Bacteria 48409
4 JGI25163J39215_1000665 3300002771 Bacteria 9224
5 JGI25164J39214_1000039 3300002772 Bacteria 129437
6 JGI25164J39214_1000325 3300002772 Bacteria 30707
7 JGI25152J39213_1002251 3300002773 Bacteria 7454
8 JGI25153J46596_10000149 3300003215 Bacteria 70796
9 JGI25153J46596_10005996 3300003215 Bacteria 6248
10 rootH2_10035720 3300003320 Bacteria 11618
11 JGI25161J50226_1000146 3300003374 Bacteria 49133
12 Ga0055538_1000052 3300003751 Bacteria 129813
13 Ga0055538_1000235 3300003751 Bacteria 30707
14 Ga0055539_1000077 3300003752 Bacteria 129445
15 Ga0055539_1000270 3300003752 Bacteria 30707
16 Ga0055533_1000083 3300003756 Bacteria 129813
17 Ga0055533_1000261 3300003756 Bacteria 30707
18 Ga0055525_1000110 3300003759 Bacteria 129813
19 Ga0055525_1000362 3300003759 Bacteria 30707
20 Ga0055526_1000637 3300003771 Bacteria 27216
21 Ga0055528_1000793 3300003790 Bacteria 21884
22 Ga0055540_1003319 3300003792 Bacteria 7843
23 Ga0055531_10004489 3300003794 Bacteria 8475
24 Ga0055541_1000054 3300003841 Bacteria 129813
25 Ga0055541_1000170 3300003841 Bacteria 30707
26 Ga0055543_1000062 3300004625 Bacteria 98034
27 Ga0065704_10000015 3300005289 Bacteria 105766
28 Ga0065704_10000016 3300005289 Bacteria 67854
29 Ga0070666_10066453 3300005335 Bacteria 2447
30 Ga0068855_100003518 3300005563 Bacteria 19169
31 Ga0068855_100015440 3300005563 Bacteria 9193
32 Ga0068857_100001029 3300005577 Bacteria 21555
33 Ga0068852_100000180 3300005616 Bacteria 43078
34 Ga0068860_100016954 3300005843 Bacteria 7100
35 Ga0079104_1000063 3300006946 Bacteria 159519
36 Ga0105244_10000085 3300009036 Bacteria 102531
37 Ga0105244_10000617 3300009036 Bacteria 31522
38 Ga0105244_10003938 3300009036 Bacteria 10416
39 Ga0105250_10000073 3300009092 Bacteria 94051
40 Ga0105250_10000209 3300009092 Bacteria 49144
41 Ga0105240_10001800 3300009093 Bacteria 36076
42 Ga0105240_10001946 3300009093 Bacteria 34217
43 Ga0105240_10014188 3300009093 Bacteria 10882
44 Ga0105240_10021619 3300009093 Bacteria 8557
45 Ga0105240_10093629 3300009093 Bacteria 3667
46 Ga0105237_10000780 3300009545 Bacteria 43609
47 Ga0105237_10003152 3300009545 Bacteria 19845
48 Ga0105238_10007398 3300009551 Bacteria 11002
49 Ga0105238_10009723 3300009551 Bacteria 9628
50 Ga0105238_10034384 3300009551 Bacteria 5157
51 Ga0105239_10002166 3300010375 Bacteria 25268
52 Ga0105246_10003560 3300011119 Bacteria 9425
53 Ga0105246_10032997 3300011119 Bacteria 3438
54 Ga0157373_10000443 3300013100 Bacteria 32906
55 Ga0157373_10014955 3300013100 Bacteria 5680
56 Ga0157371_10000061 3300013102 Bacteria 170142
57 Ga0157371_10000075 3300013102 Bacteria 162328
58 Ga0157371_10000169 3300013102 Bacteria 95021
59 Ga0157370_10000118 3300013104 Bacteria 92105
60 Ga0157369_10010845 3300013105 Bacteria 10379
61 Ga0157369_10025423 3300013105 Bacteria 6575
62 Ga0157369_10087584 3300013105 Bacteria 3324
63 Ga0157372_10000258 3300013307 Bacteria 58520
64 Ga0182008_10001409 3300014497 Bacteria 16139
65 Ga0182006_1001180 3300015261 Bacteria 16409
66 Ga0182007_10001942 3300015262 Bacteria 10705
67 Ga0209760_100038 3300025207 Bacteria 126360
68 Ga0209760_100073 3300025207 Bacteria 81377
69 Ga0209436_100018 3300025208 Bacteria 113499
70 Ga0209784_100001 3300025224 Bacteria 3600592
71 Ga0209784_100012 3300025224 Bacteria 535823
72 Ga0209566_100001 3300025225 Bacteria 3600765
73 Ga0209566_100010 3300025225 Bacteria 535823
74 Ga0209674_100002 3300025226 Bacteria 3600592
75 Ga0209674_100023 3300025226 Bacteria 535823
76 Ga0209563_100002 3300025230 Bacteria 2045675
77 Ga0209563_100027 3300025230 Bacteria 535823
78 Ga0207427_100017 3300025231 Bacteria 535823
79 Ga0207427_100032 3300025231 Bacteria 349939
80 Ga0209437_100001 3300025233 Bacteria 2045675
81 Ga0209437_100029 3300025233 Bacteria 535823
82 Ga0209677_100002 3300025253 Bacteria 2045675
83 Ga0209677_100014 3300025253 Bacteria 535823
84 Ga0209233_1002481 3300025261 Bacteria 6757
85 Ga0209673_1004400 3300025273 Bacteria 7565
86 Ga0209130_1000009 3300025284 Bacteria 498952
87 Ga0209564_1000685 3300025295 Bacteria 49978
88 Ga0209758_1000060 3300025297 Bacteria 324326
89 Ga0209758_1000896 3300025297 Bacteria 40464
90 Ga0209256_1005458 3300025299 Bacteria 7312
91 Ga0207426_1000041 3300025302 Bacteria 433536
92 Ga0207696_1000110 3300025711 Bacteria 155640
93 Ga0207696_1000148 3300025711 Bacteria 120559
94 Ga0207696_1000309 3300025711 Bacteria 54866
95 Ga0207655_1000188 3300025728 Bacteria 109393
96 Ga0207655_1000524 3300025728 Bacteria 48937
97 Ga0207655_1000586 3300025728 Bacteria 44995
98 Ga0207655_1006819 3300025728 Bacteria 7505
99 Ga0207654_10013546 3300025911 Bacteria 4196
100 Ga0207707_10058355 3300025912 Bacteria 3359
101 Ga0207695_10000051 3300025913 Bacteria 399641
102 Ga0207695_10007439 3300025913 Bacteria 13937
103 Ga0207671_10001466 3300025914 Bacteria 27257
104 Ga0207671_10001778 3300025914 Bacteria 24205
105 Ga0207671_10009297 3300025914 Bacteria 8230
106 Ga0207694_10031040 3300025924 Bacteria 4080
107 Ga0207694_10125436 3300025924 Bacteria 2053
108 Ga0207667_10000100 3300025949 Bacteria 138482
109 Ga0207667_10005078 3300025949 Bacteria 16075
110 Ga0207667_10069933 3300025949 Bacteria 3654
111 Ga0207640_10009526 3300025981 Bacteria 5441
112 Ga0207674_10007224 3300026116 Bacteria 12960
113 Ga0207698_10000108 3300026142 Bacteria 51893
114 Ga0209281_1000110 3300027111 Bacteria 215631
115 Ga0209371_1002490 3300027312 Bacteria 10230
116 Ga0268264_10029822 3300028381 Bacteria 4471
117 Ga0268256_1000909 3300030500 Bacteria 20414
118 Ga0268256_1015893 3300030500 Bacteria 2177
119 Ga0307513_10005256 3300031456 Bacteria 17150
120 Ga0307516_10004269 3300031730 Bacteria 17757
121 Ga0307516_10056476 3300031730 Bacteria 3828
122 Ga0395899_0000314 3300037312 Bacteria 62037
123 Ga0395900_0000408 3300037418 Bacteria 62036
124 Ga0395898_0000666 3300037466 Bacteria 62036
125 Ga0395905_0000392 3300037471 Bacteria 62036
126 Ga0395901_0000292 3300038443 Bacteria 62036
127 Ga0436361_0106719 3300039447 Bacteria 6126
128 Ga0439438_000303 3300041405 Bacteria 22066
129 Ga0439447_000174 3300041407 Bacteria 22394
130 Ga0439466_0000018 3300041411 Bacteria 103207
131 Ga0450910_000036 3300042147 Bacteria 15727
132 Ga0450908_000057 3300042184 Bacteria 22298
133 Ga0495617_014481 3300046452 Bacteria 2680
134 Ga0495591_000012 3300046458 Bacteria 274403
135 Ga0495638_0000255 3300046460 Bacteria 71823
136 Ga0495650_0000102 3300046471 Bacteria 211007
137 Ga0495650_0000126 3300046471 Bacteria 178143
138 Ga0495607_0000491 3300046501 Bacteria 39545
139 Ga0495607_0001077 3300046501 Bacteria 24947
140 Ga0495610_0041533 3300046512 Bacteria 2308
141 Ga0495632_0000896 3300046519 Bacteria 26129
142 Ga0495654_0000021 3300046530 Bacteria 270163
143 Ga0495611_0012241 3300046648 Bacteria 3647
144 Ga0495588_0001270 3300046674 Bacteria 10828
145 Ga0495660_0000006 3300046810 Bacteria 571713
146 Ga0495660_0000075 3300046810 Bacteria 106495
147 Ga0495672_0007619 3300047320 Bacteria 8123
148 Ga0495673_0000376 3300047469 Bacteria 53499
149 Ga0495681_0007658 3300047470 Bacteria 6865
150 Ga0495686_0000165 3300047472 Bacteria 125611
151 Ga0496101_0000111 3300048904 Bacteria 83227
152 Ga0496104_0000959 3300048907 Bacteria 24789
153 Ga0496104_0001800 3300048907 Bacteria 18577
154 Ga0496116_0000020 3300048919 Bacteria 501307
155 Ga0496116_0000048 3300048919 Bacteria 314562
156 Ga0496116_0000243 3300048919 Bacteria 99201
157 Ga0496117_0000036 3300048920 Bacteria 325635
158 Ga0496117_0003882 3300048920 Bacteria 16968
159 Ga0496117_0034076 3300048920 Bacteria 3843
160 Ga0496118_0000112 3300048921 Bacteria 150756
161 Ga0496118_0000476 3300048921 Bacteria 66457
162 Ga0496119_0006247 3300048922 Bacteria 11124
163 Ga0496119_0020592 3300048922 Bacteria 4805
164 Ga0496119_0029155 3300048922 Bacteria 3749
165 Ga0496120_0000405 3300048923 Bacteria 69225
166 Ga0496120_0000495 3300048923 Bacteria 61601
167 Ga0496120_0003092 3300048923 Bacteria 15658
168 Ga0496121_0015416 3300048924 Bacteria 8011
169 Ga0496122_0000002 3300048925 Bacteria 905834
170 Ga0496122_0000010 3300048925 Bacteria 547417
171 Ga0496122_0000086 3300048925 Bacteria 207993
172 Ga0496122_0029565 3300048925 Bacteria 4618
173 Ga0496123_0000002 3300048926 Bacteria 1811682
174 Ga0496123_0000021 3300048926 Bacteria 378760
175 Ga0496123_0000061 3300048926 Bacteria 220856
176 Ga0496123_0016917 3300048926 Bacteria 5892
177 Ga0496124_0000084 3300048927 Bacteria 204993
178 Ga0496124_0000092 3300048927 Bacteria 189213
179 Ga0496124_0014617 3300048927 Bacteria 7580
180 Ga0496124_0014927 3300048927 Bacteria 7479
181 Ga0496125_0000071 3300048928 Bacteria 243580
182 Ga0496125_0000103 3300048928 Bacteria 201675
183 Ga0496125_0073731 3300048928 Bacteria 2651
184 Ga0496126_0000229 3300048929 Bacteria 120333
185 Ga0496126_0000304 3300048929 Bacteria 104416
186 Ga0496126_0000554 3300048929 Bacteria 71982
187 Ga0501034_0001041 3300049571 Bacteria 39488
188 Ga0501034_0029145 3300049571 Bacteria 5612
189 Ga0501038_0023135 3300049574 Bacteria 5560
190 Ga0501047_0015518 3300049581 Bacteria 7257
191 Ga0501073_0018456 3300049589 Bacteria 5042
192 Ga0501080_0048869 3300049742 Bacteria 3936
193 Ga0501083_0014324 3300049744 Bacteria 5547
194 Ga0501280_003296 3300049776 Bacteria 2504
195 Ga0501035_0040149 3300049822 Bacteria 4231
196 Ga0501044_0005244 3300049823 Bacteria 14417
197 nmdc:mga03n38_19968_c1 3300050490 Bacteria 2673
198 nmdc:mga00v17_50_c1 3300050491 Bacteria 73821
199 nmdc:mga0sz30_731_c1 3300050516 Bacteria 12002
200 Ga0500560_000027 3300053107 Bacteria 16730
201 Ga0500616_0000465 3300053153 Bacteria 52660
202 Ga0500616_0001844 3300053153 Bacteria 19195
203 Ga0500622_0000239 3300053156 Bacteria 57040
204 Ga0500634_0013886 3300053161 Bacteria 4236
205 Ga0500636_0012447 3300053177 Bacteria 4985
206 Ga0501084_0031512 3300054114 Bacteria 4433
207 Ga0500661_001173 3300055283 Bacteria 4899
208 Ga0501082_0010445 3300060353 Bacteria 7990

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005577 Ga0068857_100001029 Ga0068857_1000010298 528
2 3300005616 Ga0068852_100000180 Ga0068852_1000001805 528
3 3300009093 Ga0105240_10021619 Ga0105240_1002161910 528
4 3300009551 Ga0105238_10009723 Ga0105238_100097235 528
5 3300013105 Ga0157369_10087584 Ga0157369_100875844 528
6 3300013307 Ga0157372_10000258 Ga0157372_1000025837 528
7 3300025924 Ga0207694_10031040 Ga0207694_100310402 528
8 3300025949 Ga0207667_10000100 Ga0207667_10000100113 528
9 3300025981 Ga0207640_10009526 Ga0207640_100095262 528
10 3300026116 Ga0207674_10007224 Ga0207674_100072249 528
11 3300026142 Ga0207698_10000108 Ga0207698_1000010838 528
12 3300005335 Ga0070666_10066453 Ga0070666_100664532 530
13 3300005563 Ga0068855_100015440 Ga0068855_1000154405 531
14 3300025949 Ga0207667_10069933 Ga0207667_100699333 531
15 3300009093 Ga0105240_10001946 Ga0105240_100019464 532
16 3300009551 Ga0105238_10007398 Ga0105238_100073986 532
17 3300025911 Ga0207654_10013546 Ga0207654_100135462 532
18 3300025913 Ga0207695_10007439 Ga0207695_100074396 532
19 3300025914 Ga0207671_10009297 Ga0207671_100092974 532
20 3300025924 Ga0207694_10125436 Ga0207694_101254362 532
21 3300005843 Ga0068860_100016954 Ga0068860_1000169548 533
22 3300009093 Ga0105240_10014188 Ga0105240_100141886 533
23 3300009093 Ga0105240_10093629 Ga0105240_100936292 533
24 3300009545 Ga0105237_10003152 Ga0105237_100031529 533
25 3300010375 Ga0105239_10002166 Ga0105239_1000216619 533
26 3300025914 Ga0207671_10001778 Ga0207671_1000177813 533
27 3300028381 Ga0268264_10029822 Ga0268264_100298225 533
28 3300009545 Ga0105237_10000780 Ga0105237_100007806 538
29 3300025914 Ga0207671_10001466 Ga0207671_1000146613 538
30 3300005563 Ga0068855_100003518 Ga0068855_1000035189 540
31 3300009093 Ga0105240_10001800 Ga0105240_1000180028 540
32 3300025913 Ga0207695_10000051 Ga0207695_10000051289 540
33 3300025949 Ga0207667_10005078 Ga0207667_100050789 540
34 3300050490 nmdc:mga03n38_19968_c1 nmdc:mga03n38_19968_c1_46_1692 540
35 3300049776 Ga0501280_003296 Ga0501280_003296_835_2475 544
36 3300031730 Ga0307516_10004269 Ga0307516_100042695 550
37 3300003320 rootH2_10035720 rootH2_100357203 551
38 3300025912 Ga0207707_10058355 Ga0207707_100583552 552
39 3300047472 Ga0495686_0000165 Ga0495686_0000165_73989_75842 557
40 3300031730 Ga0307516_10056476 Ga0307516_100564762 558
41 3300002773 JGI25152J39213_1002251 JGI25152J39213_10022515 567
42 3300003215 JGI25153J46596_10005996 JGI25153J46596_100059962 567
43 3300003374 JGI25161J50226_1000146 JGI25161J50226_100014622 567
44 3300003771 Ga0055526_1000637 Ga0055526_100063721 567
45 3300003792 Ga0055540_1003319 Ga0055540_10033193 567
46 3300004625 Ga0055543_1000062 Ga0055543_100006242 567
47 3300031456 Ga0307513_10005256 Ga0307513_100052564 584
48 3300048927 Ga0496124_0000084 Ga0496124_0000084_118603_120357 584
49 3300046452 Ga0495617_014481 Ga0495617_014481_829_2616 588
50 iso_pu_bacteria 2854601825 2854602109 591
51 iso_pu_bacteria 2978969890 2978970377 591
52 iso_pu_bacteria 2984587000 2984587398 591
53 iso_pu_bacteria 2939602548 2939603872 592
54 3300003794 Ga0055531_10004489 Ga0055531_100044897 593
55 3300011119 Ga0105246_10003560 Ga0105246_100035609 593
56 3300011119 Ga0105246_10032997 Ga0105246_100329972 593
57 3300013100 Ga0157373_10000443 Ga0157373_1000044310 593
58 3300013102 Ga0157371_10000169 Ga0157371_1000016969 593
59 3300025711 Ga0207696_1000110 Ga0207696_100011023 593
60 3300046458 Ga0495591_000012 Ga0495591_000012_221781_223583 593
61 3300046530 Ga0495654_0000021 Ga0495654_0000021_215376_217178 593
62 3300048904 Ga0496101_0000111 Ga0496101_0000111_10446_12248 593
63 3300048922 Ga0496119_0020592 Ga0496119_0020592_2280_4082 593
64 3300048923 Ga0496120_0000405 Ga0496120_0000405_4902_6704 593
65 3300048925 Ga0496122_0029565 Ga0496122_0029565_93_1895 593
66 3300048926 Ga0496123_0016917 Ga0496123_0016917_93_1895 593
67 3300048927 Ga0496124_0014617 Ga0496124_0014617_5155_6957 593
68 iso_pu_bacteria 2511231025 2511381522 593
69 iso_pu_bacteria 2511231035 2511436450 593
70 iso_pu_bacteria 2876601092 2876604476 593
71 iso_pu_bacteria 8016733728 8016738372 593
72 iso_pu_bacteria 8019499862 8019500011 593
73 3300009036 Ga0105244_10003938 Ga0105244_100039386 594
74 3300025728 Ga0207655_1006819 Ga0207655_10068193 594
75 3300027312 Ga0209371_1002490 Ga0209371_10024902 594
76 3300030500 Ga0268256_1000909 Ga0268256_100090921 594
77 3300030500 Ga0268256_1015893 Ga0268256_10158932 594
78 iso_pu_bacteria 2515154107 2515612887 594
79 3300013105 Ga0157369_10025423 Ga0157369_100254236 595
80 iso_pu_bacteria 2508501050 2508732074 595
81 iso_pu_bacteria 2554235003 2554246021 595
82 iso_pu_bacteria 2558860242 2559296213 595
83 iso_pu_bacteria 2585427591 2585827078 595
84 iso_pu_bacteria 2585427592 2585833132 595
85 iso_pu_bacteria 2595698237 2596372947 595
86 iso_pu_bacteria 2773857925 2774872679 595
87 iso_pu_bacteria 2808606387 2808988434 595
88 iso_pu_bacteria 2852103415 2852107975 595
89 iso_pu_bacteria 2855195626 2855195659 595
90 iso_pu_bacteria 2858466076 2858470430 595
91 iso_pu_bacteria 2871272651 2871274741 595
92 iso_pu_bacteria 2871282230 2871283406 595
93 iso_pu_bacteria 2882456835 2882463540 595
94 iso_pu_bacteria 2899845264 2899848556 595
95 iso_pu_bacteria 2900051742 2900054931 595
96 iso_pu_bacteria 2919166419 2919168186 595
97 iso_pu_bacteria 2926760298 2926763162 595
98 iso_pu_bacteria 2928125067 2928125690 595
99 iso_pu_bacteria 2978969890 2978971713 595
100 iso_pu_bacteria 2979089926 2979091815 595
101 iso_pu_bacteria 2979095461 2979097331 595
102 iso_pu_bacteria 2984587000 2984588855 595
103 iso_pu_bacteria 650716007 650842610 595
104 3300013100 Ga0157373_10014955 Ga0157373_100149554 596
105 3300013104 Ga0157370_10000118 Ga0157370_1000011813 596
106 3300013105 Ga0157369_10010845 Ga0157369_100108458 596
107 3300046674 Ga0495588_0001270 Ga0495588_0001270_2831_4675 596
108 3300047470 Ga0495681_0007658 Ga0495681_0007658_3764_5608 596
109 3300048919 Ga0496116_0000243 Ga0496116_0000243_26773_28596 596
110 3300048920 Ga0496117_0000036 Ga0496117_0000036_59544_61388 596
111 3300048922 Ga0496119_0029155 Ga0496119_0029155_623_2467 596
112 3300048923 Ga0496120_0000495 Ga0496120_0000495_16666_18510 596
113 3300048925 Ga0496122_0000002 Ga0496122_0000002_830152_831996 596
114 3300048926 Ga0496123_0000002 Ga0496123_0000002_830152_831996 596
115 3300048926 Ga0496123_0000002 Ga0496123_0000002_979687_981531 596
116 3300048928 Ga0496125_0073731 Ga0496125_0073731_809_2632 596
117 3300048929 Ga0496126_0000554 Ga0496126_0000554_27245_29068 596
118 3300050491 nmdc:mga00v17_50_c1 nmdc:mga00v17_50_c1_7725_9569 596
119 3300050516 nmdc:mga0sz30_731_c1 nmdc:mga0sz30_731_c1_6586_8430 596
120 3300053107 Ga0500560_000027 Ga0500560_000027_4568_6412 596
121 iso_pu_bacteria 2599185156 2599334543 596
122 iso_pu_bacteria 2667528173 2671107792 596
123 iso_pu_bacteria 2842922631 2842925317 596
124 3300014497 Ga0182008_10001409 Ga0182008_100014095 597
125 3300015261 Ga0182006_1001180 Ga0182006_100118012 597
126 3300015262 Ga0182007_10001942 Ga0182007_100019426 597
127 3300037312 Ga0395899_0000314 Ga0395899_0000314_55816_57648 597
128 3300037418 Ga0395900_0000408 Ga0395900_0000408_55815_57647 597
129 3300037466 Ga0395898_0000666 Ga0395898_0000666_55815_57647 597
130 3300037471 Ga0395905_0000392 Ga0395905_0000392_55815_57647 597
131 3300038443 Ga0395901_0000292 Ga0395901_0000292_4390_6222 597
132 3300041405 Ga0439438_000303 Ga0439438_000303_8389_10272 597
133 3300041407 Ga0439447_000174 Ga0439447_000174_8848_10731 597
134 3300041411 Ga0439466_0000018 Ga0439466_0000018_62180_64063 597
135 3300042147 Ga0450910_000036 Ga0450910_000036_5509_7392 597
136 3300042184 Ga0450908_000057 Ga0450908_000057_11197_13080 597
137 3300046501 Ga0495607_0001077 Ga0495607_0001077_19745_21643 597
138 3300046648 Ga0495611_0012241 Ga0495611_0012241_871_2721 597
139 3300055283 Ga0500661_001173 Ga0500661_001173_2934_4763 597
140 iso_pu_bacteria 2904474040 2904476804 597
141 iso_pu_bacteria 2904504865 2904508921 597
142 iso_pu_bacteria 2919150387 2919152973 597
143 iso_pu_bacteria 2927143783 2927146934 597
144 3300002737 JGI25162J39368_1000478 JGI25162J39368_10004781 598
145 3300002771 JGI25163J39215_1000665 JGI25163J39215_10006651 598
146 3300002772 JGI25164J39214_1000325 JGI25164J39214_10003251 598
147 3300003751 Ga0055538_1000235 Ga0055538_10002351 598
148 3300003752 Ga0055539_1000270 Ga0055539_10002701 598
149 3300003756 Ga0055533_1000261 Ga0055533_10002611 598
150 3300003759 Ga0055525_1000362 Ga0055525_10003621 598
151 3300003841 Ga0055541_1000170 Ga0055541_10001701 598
152 3300005289 Ga0065704_10000015 Ga0065704_1000001593 598
153 3300009092 Ga0105250_10000073 Ga0105250_1000007347 598
154 3300013102 Ga0157371_10000061 Ga0157371_10000061111 598
155 3300025207 Ga0209760_100073 Ga0209760_10007350 598
156 3300025224 Ga0209784_100001 Ga0209784_1000011524 598
157 3300025225 Ga0209566_100001 Ga0209566_1000011524 598
158 3300025226 Ga0209674_100002 Ga0209674_1000021524 598
159 3300025230 Ga0209563_100002 Ga0209563_10000259 598
160 3300025231 Ga0207427_100032 Ga0207427_10003259 598
161 3300025233 Ga0209437_100001 Ga0209437_10000159 598
162 3300025253 Ga0209677_100002 Ga0209677_10000259 598
163 3300025261 Ga0209233_1002481 Ga0209233_10024812 598
164 3300025711 Ga0207696_1000148 Ga0207696_100014856 598
165 3300025728 Ga0207655_1000586 Ga0207655_100058624 598
166 3300046471 Ga0495650_0000126 Ga0495650_0000126_127140_128972 598
167 3300046810 Ga0495660_0000075 Ga0495660_0000075_80639_82471 598
168 3300048907 Ga0496104_0001800 Ga0496104_0001800_5413_7245 598
169 3300048919 Ga0496116_0000048 Ga0496116_0000048_30841_32673 598
170 3300048920 Ga0496117_0003882 Ga0496117_0003882_2095_3927 598
171 3300048920 Ga0496117_0034076 Ga0496117_0034076_629_2461 598
172 3300048921 Ga0496118_0000476 Ga0496118_0000476_39775_41607 598
173 3300048925 Ga0496122_0000086 Ga0496122_0000086_77234_79066 598
174 3300048926 Ga0496123_0000021 Ga0496123_0000021_77380_79212 598
175 3300048927 Ga0496124_0000092 Ga0496124_0000092_94856_96688 598
176 3300048928 Ga0496125_0000103 Ga0496125_0000103_308_2140 598
177 3300048929 Ga0496126_0000229 Ga0496126_0000229_23484_25316 598
178 iso_pu_bacteria 2585427591 2585825571 598
179 iso_pu_bacteria 2585427592 2585831955 598
180 iso_pu_bacteria 2667528173 2671110744 598
181 iso_pu_bacteria 2889306138 2889310092 598
182 iso_pu_bacteria 2902405164 2902406419 598
183 iso_pu_bacteria 2904474040 2904479171 598
184 iso_pu_bacteria 2919150387 2919155475 598
185 iso_pu_bacteria 2927143783 2927148889 598
186 iso_pu_bacteria 2939631187 2939635029 598
187 3300039447 Ga0436361_0106719 Ga0436361_0106719_728_2545 599
188 3300046501 Ga0495607_0000491 Ga0495607_0000491_14432_16249 599
189 3300046512 Ga0495610_0041533 Ga0495610_0041533_215_2020 599
190 3300046519 Ga0495632_0000896 Ga0495632_0000896_9698_11536 599
191 3300053177 Ga0500636_0012447 Ga0500636_0012447_3012_4820 599
192 3300002737 JGI25162J39368_1000067 JGI25162J39368_100006711 600
193 3300002771 JGI25163J39215_1000063 JGI25163J39215_100006335 600
194 3300002772 JGI25164J39214_1000039 JGI25164J39214_1000039127 600
195 3300003215 JGI25153J46596_10000149 JGI25153J46596_1000014957 600
196 3300003751 Ga0055538_1000052 Ga0055538_1000052127 600
197 3300003752 Ga0055539_1000077 Ga0055539_1000077127 600
198 3300003756 Ga0055533_1000083 Ga0055533_1000083127 600
199 3300003759 Ga0055525_1000110 Ga0055525_1000110127 600
200 3300003790 Ga0055528_1000793 Ga0055528_10007933 600
201 3300003841 Ga0055541_1000054 Ga0055541_1000054127 600
202 3300005289 Ga0065704_10000016 Ga0065704_1000001611 600
203 3300006946 Ga0079104_1000063 Ga0079104_100006317 600
204 3300009036 Ga0105244_10000085 Ga0105244_1000008512 600
205 3300009036 Ga0105244_10000617 Ga0105244_1000061711 600
206 3300009092 Ga0105250_10000209 Ga0105250_100002093 600
207 3300009551 Ga0105238_10034384 Ga0105238_100343844 600
208 3300013102 Ga0157371_10000075 Ga0157371_10000075143 600
209 3300025207 Ga0209760_100038 Ga0209760_100038107 600
210 3300025208 Ga0209436_100018 Ga0209436_10001860 600
211 3300025224 Ga0209784_100012 Ga0209784_100012372 600
212 3300025225 Ga0209566_100010 Ga0209566_100010372 600
213 3300025226 Ga0209674_100023 Ga0209674_100023372 600
214 3300025230 Ga0209563_100027 Ga0209563_100027372 600
215 3300025231 Ga0207427_100017 Ga0207427_100017372 600
216 3300025233 Ga0209437_100029 Ga0209437_100029372 600
217 3300025253 Ga0209677_100014 Ga0209677_100014372 600
218 3300025273 Ga0209673_1004400 Ga0209673_10044003 600
219 3300025284 Ga0209130_1000009 Ga0209130_1000009232 600
220 3300025295 Ga0209564_1000685 Ga0209564_100068534 600
221 3300025297 Ga0209758_1000060 Ga0209758_1000060326 600
222 3300025297 Ga0209758_1000896 Ga0209758_100089634 600
223 3300025299 Ga0209256_1005458 Ga0209256_10054582 600
224 3300025302 Ga0207426_1000041 Ga0207426_1000041170 600
225 3300025711 Ga0207696_1000309 Ga0207696_100030953 600
226 3300025728 Ga0207655_1000188 Ga0207655_100018819 600
227 3300025728 Ga0207655_1000524 Ga0207655_100052430 600
228 3300027111 Ga0209281_1000110 Ga0209281_100011017 600
229 3300046460 Ga0495638_0000255 Ga0495638_0000255_2267_4105 600
230 3300046471 Ga0495650_0000102 Ga0495650_0000102_146846_148648 600
231 3300046810 Ga0495660_0000006 Ga0495660_0000006_367566_369368 600
232 3300047320 Ga0495672_0007619 Ga0495672_0007619_853_2691 600
233 3300047469 Ga0495673_0000376 Ga0495673_0000376_17370_19232 600
234 3300048907 Ga0496104_0000959 Ga0496104_0000959_17956_19758 600
235 3300048919 Ga0496116_0000020 Ga0496116_0000020_383534_385336 600
236 3300048921 Ga0496118_0000112 Ga0496118_0000112_88684_90486 600
237 3300048922 Ga0496119_0006247 Ga0496119_0006247_2703_4505 600
238 3300048923 Ga0496120_0003092 Ga0496120_0003092_5163_6965 600
239 3300048924 Ga0496121_0015416 Ga0496121_0015416_636_2483 600
240 3300048925 Ga0496122_0000010 Ga0496122_0000010_86132_87934 600
241 3300048926 Ga0496123_0000061 Ga0496123_0000061_128744_130546 600
242 3300048927 Ga0496124_0014927 Ga0496124_0014927_5176_7023 600
243 3300048928 Ga0496125_0000071 Ga0496125_0000071_131471_133273 600
244 3300048929 Ga0496126_0000304 Ga0496126_0000304_31254_33056 600
245 3300049571 Ga0501034_0001041 Ga0501034_0001041_7867_9777 600
246 3300049571 Ga0501034_0029145 Ga0501034_0029145_3305_5125 600
247 3300049574 Ga0501038_0023135 Ga0501038_0023135_833_2653 600
248 3300049581 Ga0501047_0015518 Ga0501047_0015518_158_1978 600
249 3300049589 Ga0501073_0018456 Ga0501073_0018456_3135_4955 600
250 3300049742 Ga0501080_0048869 Ga0501080_0048869_1212_3032 600
251 3300049744 Ga0501083_0014324 Ga0501083_0014324_3475_5295 600
252 3300049822 Ga0501035_0040149 Ga0501035_0040149_1994_3814 600
253 3300049823 Ga0501044_0005244 Ga0501044_0005244_710_2530 600
254 3300053153 Ga0500616_0000465 Ga0500616_0000465_22090_23961 600
255 3300053153 Ga0500616_0001844 Ga0500616_0001844_13002_14840 600
256 3300053156 Ga0500622_0000239 Ga0500622_0000239_33942_35780 600
257 3300053161 Ga0500634_0013886 Ga0500634_0013886_2056_3906 600
258 3300054114 Ga0501084_0031512 Ga0501084_0031512_1689_3509 600
259 3300060353 Ga0501082_0010445 Ga0501082_0010445_4222_6042 600
260 iso_pu_bacteria 2510461069 2510843044 600
261 iso_pu_bacteria 2510917026 2511169612 600
262 iso_pu_bacteria 2510917030 2511199638 600
263 iso_pu_bacteria 2537561587 2537876920 600
264 iso_pu_bacteria 2537561728 2538428617 600
265 iso_pu_bacteria 2582581298 2585223958 600
266 iso_pu_bacteria 2585427529 2585549181 600
267 iso_pu_bacteria 2585427633 2585997258 600
268 iso_pu_bacteria 2738541317 2738944984 600
269 iso_pu_bacteria 2818991272 2819243909 600
270 iso_pu_bacteria 2821123053 2821126270 600
271 iso_pu_bacteria 2838736955 2838737254 600
272 iso_pu_bacteria 2841840854 2841842377 600
273 iso_pu_bacteria 2842140634 2842142157 600
274 iso_pu_bacteria 2854911287 2854911481 600
275 iso_pu_bacteria 2857531043 2857532831 600
276 iso_pu_bacteria 2913308742 2913309609 600
277 iso_pu_bacteria 2919100787 2919105422 600
278 iso_pu_bacteria 2919114240 2919119471 600
279 iso_pu_bacteria 2919171160 2919177170 600
280 iso_pu_bacteria 2932401849 2932403692 600
281 iso_pu_bacteria 3002141150 3002146410 600
282 iso_pu_bacteria 8005658619 8005661691 600
283 iso_pu_bacteria 8054460903 8054464820 600

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

362

514

0.94

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

269

315

0.89

PF00005

ABC_tran

ABC transporter

59

218

0.87

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

565

612

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9482 301 552
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9411 299 552
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9408 299 536
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9374 4 260
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9305 4 240
ID Description Score Start End Superfamily
af_Q2FZR1_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9875 4 264 3.40.50.300
af_P33916_3_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9797 4 257 3.40.50.300
af_Q2G1F8_1_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9776 3 265 3.40.50.300
af_P0AAG0_1_323_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9764 4 261 3.40.50.300
af_P75796_311_605_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9737 299 592 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2E8QQL4-F1-model_v4 ABC transporter ATP-binding protein 0.98 395 556 GO:0005524
GO:0015833
GO:0016887
AF-A0A1P8X9V0-F1-model_v4 ABC transporter domain-containing protein 0.9794 139 257 GO:0005524
GO:0015833
GO:0016887
AF-A0A8A7TJ59-F1-model_v4 deleted 0.9747 302 552
AF-A0A2X4T5I7-F1-model_v4 ABC-type dipeptide transporter (EC 7.4.2.9) 0.9745 135 257 GO:0005524
GO:0016887
AF-A0A2M9LY60-F1-model_v4 Methionine ABC transporter ATP-binding protein 0.9724 303 554 GO:0005524
GO:0006865
GO:0016887

Feature Viewer

pLDDT pTM Quality
92.34 0.9 High
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Predicted Structure (AlphaFold2)

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