F385676

General Info

Members Datasets Scaffolds Average Seq Length
283 196 228 329

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10000466|Ga0307414_1000046611
Length 348
Sequence MKLRSLSRLKPSIMDKLRAMITGIQGYVPEYRLTNKELEKLVETNDEWIVTRTGIKERRILKGKDQGTSVMGAAAVKGLLEKTGTDPMDIDLIICATVTPDMPFPATGNIIADKVGAKNSFSFDIGAACSGFLYALQMGSQFIQTGTHKKVIVVGADKMSSIVNYEDRTTCILFGDGAGAVLLEPTTEELGIMDAILKADGSGAPYLHMKAGGSNRPASLETIAANEHYASQEGSTVFKFAVTNMADVSAEIMQKNGLTGEDIDWLVPHQANKRIIDATANRMGIGPDKVMMNIERYGNTTAATIPLCLWDYESQLRKGDNLVMAAFGGGFTWGSILLKWGYDPKIIL

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
3 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
4 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
5 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
6 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
7 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
8 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
9 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
10 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
11 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
12 2738541302 Pedobacter sp. CF074 Isolate Unclassified
13 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
14 2739367651 Pedobacter sp. OK291 Isolate Unclassified
15 2739367656 Pedobacter sp. CF523 Isolate Unclassified
16 2739367663 Pedobacter sp. YR510 Isolate Unclassified
17 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
18 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
19 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
20 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
21 2818991437 Pedobacter terrae 518 Isolate Unclassified
22 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
23 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
24 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
25 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
26 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
27 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
28 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
29 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
30 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
31 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
32 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
33 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
34 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
35 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
36 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
37 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
38 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
39 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
40 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
41 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
42 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
43 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
44 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
45 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
46 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
47 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
48 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
49 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
50 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
51 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
52 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
53 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
54 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
55 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
56 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
57 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
58 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
59 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
60 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
61 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
62 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
63 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
65 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
66 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
67 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
68 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
69 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
70 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
71 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
72 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
73 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
74 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
75 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
76 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
77 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
78 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
79 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
80 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
81 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
82 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
83 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
84 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
85 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
86 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
87 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
94 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
95 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
96 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
97 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
98 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
99 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
101 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
102 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
106 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
122 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
123 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
124 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
127 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
130 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
136 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
137 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
138 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
139 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
140 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
143 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
144 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
145 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
146 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
147 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
148 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
149 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
150 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
151 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
152 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
153 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
154 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
155 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
156 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
157 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
158 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
161 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
180 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
181 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
182 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
183 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
187 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
188 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
191 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
192 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
194 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
195 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
196 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.8
Metatranscriptomes 1.77
Isolates 19.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.25
Nodule 0
Rhizoplane 0
Rhizosphere 71.38
Stem 0
Stem Tuber 0
Unclassified 18.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000408 3300002737 Bacteria 35183
2 JGI25150J39212_1000013 3300002774 Bacteria 182307
3 JGI25151J46595_10000004 3300003187 Bacteria 494006
4 JGI25153J46596_10000004 3300003215 Bacteria 494006
5 rootH1_10016678 3300003316 Bacteria 4470
6 rootH2_10118844 3300003320 Bacteria 1769
7 rootH2_10136446 3300003320 Bacteria 2325
8 rootL2_10055854 3300003322 Bacteria 3067
9 rootL2_10068215 3300003322 Bacteria 3860
10 rootL2_10077383 3300003322 Bacteria 5923
11 rootL2_10121653 3300003322 Bacteria 2844
12 rootH1_10016014 3300003323 Bacteria 23433
13 rootH1_10080951 3300003323 Bacteria 1896
14 rootH1_10081996 3300003323 Bacteria 2082
15 rootH1_10090621 3300003323 Bacteria 6770
16 Ga0055536_1000010 3300003781 Bacteria 304614
17 Ga0055536_1005202 3300003781 Bacteria 6425
18 Ga0055530_10004439 3300003791 Bacteria 7211
19 Ga0055531_10000015 3300003794 Bacteria 182104
20 Ga0058861_10191345 3300004800 Bacteria 3378
21 Ga0065165_1000176 3300005262 Bacteria 113592
22 Ga0065165_1003313 3300005262 Bacteria 11523
23 Ga0065714_10107521 3300005288 Bacteria 1530
24 Ga0065715_10093706 3300005293 Bacteria 4591
25 Ga0065715_10181575 3300005293 Bacteria 1471
26 Ga0070658_10510181 3300005327 Bacteria 1039
27 Ga0070676_10254527 3300005328 Bacteria 1173
28 Ga0070680_100120125 3300005336 Bacteria 2193
29 Ga0070682_100018890 3300005337 Bacteria 4037
30 Ga0070675_100413495 3300005354 Bacteria 1205
31 Ga0070713_100045754 3300005436 Bacteria 3588
32 Ga0070681_10035228 3300005458 Bacteria 5027
33 Ga0068867_100179778 3300005459 Bacteria 1681
34 Ga0070679_100114483 3300005530 Bacteria 2682
35 Ga0068855_100000290 3300005563 Bacteria 62292
36 Ga0068855_100020224 3300005563 Bacteria 7991
37 Ga0068855_100090759 3300005563 Bacteria 3525
38 Ga0068856_100029366 3300005614 Bacteria 5372
39 Ga0081539_10000081 3300005985 Bacteria 222614
40 Ga0070717_10265590 3300006028 Bacteria 1519
41 Ga0097621_100326098 3300006237 Bacteria 1361
42 Ga0068871_100077517 3300006358 Bacteria 2747
43 Ga0068865_100238175 3300006881 Bacteria 1431
44 Ga0105244_10000046 3300009036 Bacteria 143184
45 Ga0105244_10032080 3300009036 Bacteria 2784
46 Ga0105243_10000018 3300009148 Bacteria 227618
47 Ga0105242_10060745 3300009176 Bacteria 3106
48 Ga0105242_10168308 3300009176 Bacteria 1924
49 Ga0105239_10008064 3300010375 Bacteria 12023
50 Ga0105239_10008520 3300010375 Bacteria 11656
51 Ga0105239_10025619 3300010375 Bacteria 6494
52 Ga0157373_10051747 3300013100 Bacteria 2924
53 Ga0157371_10000046 3300013102 Bacteria 187304
54 Ga0157371_10001891 3300013102 Bacteria 20940
55 Ga0157371_10003113 3300013102 Bacteria 15341
56 Ga0157371_10006209 3300013102 Bacteria 9906
57 Ga0157370_10007568 3300013104 Bacteria 11798
58 Ga0157370_10092862 3300013104 Bacteria 2832
59 Ga0157370_10124430 3300013104 Bacteria 2407
60 Ga0157370_10138939 3300013104 Bacteria 2264
61 Ga0157370_10249887 3300013104 Bacteria 1640
62 Ga0157369_10000046 3300013105 Bacteria 172851
63 Ga0157369_10009451 3300013105 Bacteria 11145
64 Ga0157369_10010084 3300013105 Bacteria 10789
65 Ga0157374_10001750 3300013296 Bacteria 18236
66 Ga0163162_10000037 3300013306 Bacteria 138420
67 Ga0163162_10077123 3300013306 Bacteria 3396
68 Ga0157375_10121049 3300013308 Bacteria 2726
69 Ga0157375_10256432 3300013308 Bacteria 1910
70 Ga0182008_10000668 3300014497 Bacteria 24875
71 Ga0182006_1000333 3300015261 Bacteria 40401
72 Ga0182006_1001862 3300015261 Bacteria 12076
73 Ga0182007_10000009 3300015262 Bacteria 316298
74 Ga0183373_1008 3300015682 Bacteria 255339
75 Ga0163161_10000019 3300017792 Bacteria 216758
76 Ga0163161_10005855 3300017792 Bacteria 8522
77 Ga0163161_10065945 3300017792 Bacteria 2642
78 Ga0163161_10093388 3300017792 Bacteria 2229
79 Ga0163161_10104047 3300017792 Bacteria 2116
80 Ga0163161_10125681 3300017792 Bacteria 1931
81 Ga0209437_100144 3300025233 Bacteria 164794
82 Ga0207425_1000008 3300025245 Bacteria 618024
83 Ga0209026_1002002 3300025250 Bacteria 8097
84 Ga0209129_1000042 3300025258 Bacteria 305537
85 Ga0209676_1000009 3300025292 Bacteria 981719
86 Ga0209676_1000328 3300025292 Bacteria 91572
87 Ga0209025_1000020 3300025294 Bacteria 618024
88 Ga0209758_1000022 3300025297 Bacteria 618024
89 Ga0209050_1000103 3300025298 Bacteria 229225
90 Ga0209050_1005173 3300025298 Bacteria 8356
91 Ga0209257_1000005 3300025304 Bacteria 1592528
92 Ga0209257_1031419 3300025304 Bacteria 1698
93 Ga0207655_1000034 3300025728 Bacteria 364737
94 Ga0207655_1025401 3300025728 Bacteria 2877
95 Ga0207707_10091010 3300025912 Bacteria 2666
96 Ga0207695_10060105 3300025913 Bacteria 3936
97 Ga0207671_10052266 3300025914 Bacteria 3028
98 Ga0207671_10135470 3300025914 Bacteria 1893
99 Ga0207660_10020245 3300025917 Bacteria 4462
100 Ga0207652_10004220 3300025921 Bacteria 11721
101 Ga0207664_10220999 3300025929 Bacteria 1643
102 Ga0207709_10000021 3300025935 Bacteria 386722
103 Ga0207667_10000341 3300025949 Bacteria 63843
104 Ga0207667_10073219 3300025949 Bacteria 3560
105 Ga0207702_10020989 3300026078 Bacteria 5405
106 Ga0207648_10062948 3300026089 Bacteria 3234
107 Ga0207676_10602024 3300026095 Bacteria 1056
108 Ga0207674_10162212 3300026116 Bacteria 2189
109 Ga0265334_10028390 3300028573 Bacteria 2248
110 Ga0265336_10003577 3300028666 Bacteria 6069
111 Ga0307515_10072791 3300028794 Bacteria 4630
112 Ga0265338_10001644 3300028800 Bacteria 35766
113 Ga0265338_10069898 3300028800 Bacteria 3014
114 Ga0307408_100017440 3300031548 Bacteria 4805
115 Ga0316576_10003385 3300031727 Bacteria 9323
116 Ga0316576_10079425 3300031727 Unclassified 2432
117 Ga0316576_10128046 3300031727 Unclassified 1909
118 Ga0316578_10083354 3300031728 Unclassified 1904
119 Ga0316578_10123718 3300031728 Bacteria 1555
120 Ga0307405_10000016 3300031731 Bacteria 197180
121 Ga0307413_10000275 3300031824 Bacteria 15724
122 Ga0307407_10000006 3300031903 Bacteria 218714
123 Ga0307412_10165746 3300031911 Bacteria 1647
124 Ga0307412_10312584 3300031911 Bacteria 1246
125 Ga0307409_100014594 3300031995 Bacteria 5119
126 Ga0307416_100000032 3300032002 Bacteria 156777
127 Ga0307414_10000466 3300032004 Bacteria 21255
128 Ga0307414_10013015 3300032004 Bacteria 4941
129 Ga0307414_10030730 3300032004 Bacteria 3512
130 Ga0307414_10063829 3300032004 Bacteria 2619
131 Ga0307414_10065879 3300032004 Bacteria 2586
132 Ga0307414_10106331 3300032004 Bacteria 2124
133 Ga0307411_10000009 3300032005 Bacteria 319906
134 Ga0307411_10007217 3300032005 Bacteria 5636
135 Ga0316585_10067125 3300032137 Unclassified 1162
136 Ga0307510_10085790 3300033180 Bacteria 3023
137 Ga0316574_0268956 3300035398 Bacteria 1087
138 Ga0316584_0003163 3300036712 Bacteria 10639
139 Ga0316584_0236672 3300036712 Unclassified 1337
140 Ga0395899_0110019 3300037312 Bacteria 1982
141 Ga0395900_0000478 3300037418 Bacteria 56604
142 Ga0395901_0032378 3300038443 Bacteria 5395
143 Ga0400483_009503 3300039062 Bacteria 57988
144 Ga0439447_002818 3300041407 Bacteria 6258
145 Ga0439466_0000082 3300041411 Bacteria 36552
146 Ga0451837_1371212 3300041494 Bacteria 4044
147 Ga0451855_0352556 3300041511 Bacteria 1182
148 Ga0451855_0704233 3300041511 Bacteria 1509
149 Ga0451855_1641273 3300041511 Bacteria 1154
150 Ga0451577_0000756 3300042876 Bacteria 49287
151 Ga0451577_0002657 3300042876 Bacteria 20919
152 Ga0451577_0009786 3300042876 Bacteria 9188
153 Ga0451577_0031246 3300042876 Bacteria 4806
154 Ga0451577_0044038 3300042876 Bacteria 3995
155 Ga0451577_0361220 3300042876 Bacteria 1317
156 Ga0451577_0517486 3300042876 Bacteria 1083
157 Ga0453683_0000235 3300044673 Bacteria 73302
158 Ga0453683_0004049 3300044673 Bacteria 10559
159 Ga0453683_0009490 3300044673 Bacteria 6495
160 Ga0453683_0032152 3300044673 Unclassified 3312
161 Ga0453683_0055932 3300044673 Bacteria 2469
162 Ga0453684_0000388 3300044712 Bacteria 180685
163 Ga0453684_0001273 3300044712 Bacteria 75558
164 Ga0453684_0001816 3300044712 Bacteria 56297
165 Ga0453684_0003762 3300044712 Bacteria 33550
166 Ga0453684_0014864 3300044712 Bacteria 12385
167 Ga0453684_0025206 3300044712 Bacteria 8645
168 Ga0453684_0107517 3300044712 Bacteria 3396
169 Ga0453684_0161268 3300044712 Bacteria 2652
170 Ga0453684_0260485 3300044712 Bacteria 1987
171 Ga0453684_0308384 3300044712 Unclassified 1797
172 Ga0451576_0000003 3300045051 Bacteria 1550573
173 Ga0451576_0000350 3300045051 Bacteria 110906
174 Ga0451576_0000605 3300045051 Bacteria 75644
175 Ga0451576_0018972 3300045051 Bacteria 7513
176 Ga0451576_0030008 3300045051 Bacteria 5815
177 Ga0451576_0043257 3300045051 Bacteria 4753
178 Ga0451576_0044678 3300045051 Bacteria 4669
179 Ga0451576_0081607 3300045051 Bacteria 3363
180 Ga0451576_0424571 3300045051 Bacteria 1395
181 Ga0451576_0484672 3300045051 Bacteria 1299
182 Ga0495638_0000025 3300046460 Bacteria 353356
183 Ga0495651_0168853 3300046462 Bacteria 1560
184 Ga0495606_0005062 3300046507 Bacteria 12825
185 Ga0495610_0000231 3300046512 Bacteria 59540
186 Ga0495610_0000237 3300046512 Bacteria 57952
187 Ga0495616_0000433 3300046513 Bacteria 31968
188 Ga0495668_0000440 3300046616 Bacteria 53231
189 Ga0495625_0037900 3300046660 Bacteria 3532
190 Ga0495687_014885 3300047443 Bacteria 3976
191 Ga0495686_0000306 3300047472 Bacteria 83341
192 Ga0495686_0068024 3300047472 Bacteria 2198
193 Ga0496116_0000075 3300048919 Bacteria 231674
194 Ga0496116_0002809 3300048919 Bacteria 17884
195 Ga0496118_0029434 3300048921 Bacteria 4605
196 Ga0496121_0053666 3300048924 Bacteria 3375
197 Ga0496122_0097693 3300048925 Bacteria 1975
198 Ga0496123_0019837 3300048926 Bacteria 5279
199 Ga0496125_0000070 3300048928 Bacteria 245793
200 Ga0501309_000141 3300049129 Bacteria 4559
201 Ga0501310_000607 3300049130 Bacteria 3156
202 Ga0501320_001641 3300049536 Bacteria 1680
203 Ga0501031_0001981 3300049568 Bacteria 12931
204 Ga0501032_0002545 3300049569 Bacteria 14271
205 Ga0501032_0011689 3300049569 Bacteria 6294
206 Ga0501033_0000177 3300049570 Bacteria 60638
207 Ga0501034_0001113 3300049571 Bacteria 37706
208 Ga0501036_0002552 3300049572 Bacteria 14318
209 Ga0501037_0005138 3300049573 Bacteria 9518
210 Ga0501038_0001009 3300049574 Bacteria 25368
211 Ga0501039_0013092 3300049575 Bacteria 6342
212 Ga0501043_0010832 3300049579 Bacteria 7140
213 Ga0501249_000007 3300049679 Bacteria 198318
214 Ga0501225_0011649 3300049705 Bacteria 2474
215 Ga0501241_013957 3300049758 Bacteria 1459
216 Ga0501266_000013 3300049763 Bacteria 183849
217 Ga0501035_0043480 3300049822 Bacteria 4048
218 Ga0501044_0000936 3300049823 Bacteria 35057
219 Ga0501045_0000546 3300049824 Bacteria 23550
220 Ga0500635_0001449 3300053080 Bacteria 5704
221 Ga0500641_0017523 3300053096 Bacteria 2680
222 Ga0500658_0000005 3300053134 Bacteria 369268
223 Ga0500616_0000024 3300053153 Bacteria 455811
224 Ga0500616_0001720 3300053153 Bacteria 20076
225 Ga0500616_0078775 3300053153 Bacteria 1661
226 Ga0500624_000721 3300053157 Bacteria 8255
227 Ga0500584_002577 3300053726 Bacteria 6914
228 Ga0587077_001018 3300059493 Bacteria 2816

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053096 Ga0500641_0017523 Ga0500641_0017523_1751_2668 289
2 iso_pu_bacteria 2895498888 2895503882 294
3 3300025250 Ga0209026_1002002 Ga0209026_10020027 296
4 3300032004 Ga0307414_10030730 Ga0307414_100307303 299
5 3300026095 Ga0207676_10602024 Ga0207676_106020241 302
6 3300045051 Ga0451576_0424571 Ga0451576_0424571_49_966 302
7 3300009036 Ga0105244_10000046 Ga0105244_1000004696 307
8 3300013308 Ga0157375_10121049 Ga0157375_101210493 307
9 3300025728 Ga0207655_1000034 Ga0207655_1000034169 307
10 3300046513 Ga0495616_0000433 Ga0495616_0000433_29814_30803 307
11 3300053726 Ga0500584_002577 Ga0500584_002577_5227_6225 307
12 3300035398 Ga0316574_0268956 Ga0316574_0268956_72_1076 309
13 3300042876 Ga0451577_0517486 Ga0451577_0517486_14_958 311
14 3300048919 Ga0496116_0002809 Ga0496116_0002809_1855_2844 316
15 3300048925 Ga0496122_0097693 Ga0496122_0097693_400_1389 316
16 3300048926 Ga0496123_0019837 Ga0496123_0019837_1705_2694 316
17 3300049679 Ga0501249_000007 Ga0501249_000007_107458_108456 316
18 3300009176 Ga0105242_10168308 Ga0105242_101683082 317
19 3300045051 Ga0451576_0030008 Ga0451576_0030008_83_1057 321
20 3300009176 Ga0105242_10060745 Ga0105242_100607452 322
21 iso_pu_bacteria 2513020052 2513233637 325
22 iso_pu_bacteria 2519899754 2520880096 325
23 iso_pu_bacteria 2522125168 2522549225 325
24 iso_pu_bacteria 2585427687 2586206355 325
25 iso_pu_bacteria 2643221600 2644012740 325
26 iso_pu_bacteria 2643221667 2644370462 325
27 iso_pu_bacteria 2643221716 2644641791 325
28 iso_pu_bacteria 2643221725 2644682094 325
29 iso_pu_bacteria 2721755487 2722726553 325
30 iso_pu_bacteria 2738541279 2738735523 325
31 iso_pu_bacteria 2738541285 2738768100 325
32 iso_pu_bacteria 2738541302 2738854174 325
33 iso_pu_bacteria 2738543007 2739217105 325
34 iso_pu_bacteria 2739367651 2739587652 325
35 iso_pu_bacteria 2739367656 2739614634 325
36 iso_pu_bacteria 2739367663 2739648055 325
37 iso_pu_bacteria 2739367857 2740003726 325
38 iso_pu_bacteria 2739367858 2740008543 325
39 iso_pu_bacteria 2802428842 2802655048 325
40 iso_pu_bacteria 2816332280 2817413774 325
41 iso_pu_bacteria 2818991437 2819545559 325
42 iso_pu_bacteria 2842722452 2842724559 325
43 iso_pu_bacteria 2842909656 2842911947 325
44 iso_pu_bacteria 2849281842 2849283585 325
45 iso_pu_bacteria 2857613821 2857616488 325
46 iso_pu_bacteria 2857618242 2857622394 325
47 iso_pu_bacteria 2857627736 2857630481 325
48 iso_pu_bacteria 2881359912 2881361063 325
49 iso_pu_bacteria 2881955468 2881956476 325
50 iso_pu_bacteria 2884634485 2884636322 325
51 iso_pu_bacteria 2887375801 2887377229 325
52 iso_pu_bacteria 2890737413 2890740095 325
53 iso_pu_bacteria 2896085136 2896087401 325
54 iso_pu_bacteria 2896344016 2896345727 325
55 iso_pu_bacteria 2898713307 2898716564 325
56 iso_pu_bacteria 2903895155 2903899196 325
57 iso_pu_bacteria 2904419702 2904421643 325
58 iso_pu_bacteria 2904445276 2904448057 325
59 iso_pu_bacteria 2904555929 2904557385 325
60 iso_pu_bacteria 2904780799 2904785633 325
61 iso_pu_bacteria 2919177583 2919182349 325
62 iso_pu_bacteria 2919191525 2919194733 325
63 iso_pu_bacteria 2919437846 2919439422 325
64 iso_pu_bacteria 2919683626 2919685281 325
65 iso_pu_bacteria 2919692658 2919695743 325
66 iso_pu_bacteria 2929150217 2929150906 325
67 iso_pu_bacteria 2945997725 2945998588 325
68 iso_pu_bacteria 2954016120 2954021043 325
69 iso_pu_bacteria 2958458903 2958460549 325
70 iso_pu_bacteria 2977268062 2977272286 325
71 iso_pu_bacteria 8054307821 8054307958 325
72 iso_pu_bacteria 8055419101 8055420533 325
73 iso_pu_bacteria 8055592153 8055597202 325
74 iso_pu_bacteria 8056440228 8056440756 325
75 3300003320 rootH2_10136446 rootH2_101364462 327
76 3300005436 Ga0070713_100045754 Ga0070713_1000457543 327
77 3300013102 Ga0157371_10006209 Ga0157371_100062092 327
78 3300025929 Ga0207664_10220999 Ga0207664_102209992 327
79 3300028800 Ga0265338_10001644 Ga0265338_1000164426 327
80 3300049536 Ga0501320_001641 Ga0501320_001641_330_1319 327
81 3300031727 Ga0316576_10079425 Ga0316576_100794252 328
82 3300031728 Ga0316578_10083354 Ga0316578_100833542 328
83 3300032004 Ga0307414_10013015 Ga0307414_100130152 328
84 3300032137 Ga0316585_10067125 Ga0316585_100671251 328
85 3300036712 Ga0316584_0236672 Ga0316584_0236672_258_1253 328
86 3300049568 Ga0501031_0001981 Ga0501031_0001981_1538_2530 328
87 3300049569 Ga0501032_0002545 Ga0501032_0002545_11192_12184 328
88 3300049569 Ga0501032_0011689 Ga0501032_0011689_274_1266 328
89 3300049570 Ga0501033_0000177 Ga0501033_0000177_34764_35756 328
90 3300049571 Ga0501034_0001113 Ga0501034_0001113_27522_28514 328
91 3300049572 Ga0501036_0002552 Ga0501036_0002552_9226_10218 328
92 3300049573 Ga0501037_0005138 Ga0501037_0005138_3399_4391 328
93 3300049574 Ga0501038_0001009 Ga0501038_0001009_14958_15950 328
94 3300049575 Ga0501039_0013092 Ga0501039_0013092_2702_3694 328
95 3300049579 Ga0501043_0010832 Ga0501043_0010832_5156_6148 328
96 3300049822 Ga0501035_0043480 Ga0501035_0043480_2369_3361 328
97 3300049823 Ga0501044_0000936 Ga0501044_0000936_20533_21525 328
98 3300049824 Ga0501045_0000546 Ga0501045_0000546_2056_3048 328
99 3300002737 JGI25162J39368_1000408 JGI25162J39368_100040816 329
100 3300002774 JGI25150J39212_1000013 JGI25150J39212_1000013121 329
101 3300003187 JGI25151J46595_10000004 JGI25151J46595_1000000449 329
102 3300003215 JGI25153J46596_10000004 JGI25153J46596_1000000449 329
103 3300003316 rootH1_10016678 rootH1_100166785 329
104 3300003320 rootH2_10118844 rootH2_101188442 329
105 3300003322 rootL2_10055854 rootL2_100558542 329
106 3300003322 rootL2_10068215 rootL2_100682153 329
107 3300003322 rootL2_10077383 rootL2_100773835 329
108 3300003322 rootL2_10121653 rootL2_101216532 329
109 3300003323 rootH1_10016014 rootH1_100160144 329
110 3300003323 rootH1_10080951 rootH1_100809511 329
111 3300003323 rootH1_10081996 rootH1_100819961 329
112 3300003323 rootH1_10090621 rootH1_100906216 329
113 3300003781 Ga0055536_1000010 Ga0055536_1000010160 329
114 3300003781 Ga0055536_1005202 Ga0055536_10052024 329
115 3300003791 Ga0055530_10004439 Ga0055530_100044395 329
116 3300003794 Ga0055531_10000015 Ga0055531_1000001573 329
117 3300004800 Ga0058861_10191345 Ga0058861_101913453 329
118 3300005262 Ga0065165_1000176 Ga0065165_100017626 329
119 3300005262 Ga0065165_1003313 Ga0065165_10033134 329
120 3300005288 Ga0065714_10107521 Ga0065714_101075211 329
121 3300005293 Ga0065715_10093706 Ga0065715_100937064 329
122 3300005293 Ga0065715_10181575 Ga0065715_101815752 329
123 3300005327 Ga0070658_10510181 Ga0070658_105101811 329
124 3300005328 Ga0070676_10254527 Ga0070676_102545271 329
125 3300005336 Ga0070680_100120125 Ga0070680_1001201253 329
126 3300005337 Ga0070682_100018890 Ga0070682_1000188904 329
127 3300005354 Ga0070675_100413495 Ga0070675_1004134951 329
128 3300005458 Ga0070681_10035228 Ga0070681_100352285 329
129 3300005459 Ga0068867_100179778 Ga0068867_1001797781 329
130 3300005530 Ga0070679_100114483 Ga0070679_1001144832 329
131 3300005563 Ga0068855_100000290 Ga0068855_1000002907 329
132 3300005563 Ga0068855_100020224 Ga0068855_1000202247 329
133 3300005563 Ga0068855_100090759 Ga0068855_1000907595 329
134 3300005614 Ga0068856_100029366 Ga0068856_1000293664 329
135 3300005985 Ga0081539_10000081 Ga0081539_10000081192 329
136 3300006028 Ga0070717_10265590 Ga0070717_102655902 329
137 3300006237 Ga0097621_100326098 Ga0097621_1003260981 329
138 3300006358 Ga0068871_100077517 Ga0068871_1000775172 329
139 3300006881 Ga0068865_100238175 Ga0068865_1002381751 329
140 3300009036 Ga0105244_10032080 Ga0105244_100320802 329
141 3300009148 Ga0105243_10000018 Ga0105243_10000018146 329
142 3300010375 Ga0105239_10008064 Ga0105239_100080649 329
143 3300010375 Ga0105239_10008520 Ga0105239_100085209 329
144 3300010375 Ga0105239_10025619 Ga0105239_100256197 329
145 3300013100 Ga0157373_10051747 Ga0157373_100517474 329
146 3300013102 Ga0157371_10000046 Ga0157371_1000004654 329
147 3300013102 Ga0157371_10001891 Ga0157371_1000189114 329
148 3300013102 Ga0157371_10003113 Ga0157371_1000311314 329
149 3300013104 Ga0157370_10007568 Ga0157370_1000756810 329
150 3300013104 Ga0157370_10092862 Ga0157370_100928623 329
151 3300013104 Ga0157370_10124430 Ga0157370_101244301 329
152 3300013104 Ga0157370_10138939 Ga0157370_101389391 329
153 3300013104 Ga0157370_10249887 Ga0157370_102498872 329
154 3300013105 Ga0157369_10000046 Ga0157369_1000004655 329
155 3300013105 Ga0157369_10009451 Ga0157369_100094519 329
156 3300013105 Ga0157369_10010084 Ga0157369_1001008411 329
157 3300013296 Ga0157374_10001750 Ga0157374_100017503 329
158 3300013306 Ga0163162_10000037 Ga0163162_1000003783 329
159 3300013306 Ga0163162_10077123 Ga0163162_100771233 329
160 3300013308 Ga0157375_10256432 Ga0157375_102564322 329
161 3300014497 Ga0182008_10000668 Ga0182008_1000066821 329
162 3300015261 Ga0182006_1000333 Ga0182006_10003332 329
163 3300015261 Ga0182006_1001862 Ga0182006_100186213 329
164 3300015262 Ga0182007_10000009 Ga0182007_10000009154 329
165 3300015682 Ga0183373_1008 Ga0183373_1008191 329
166 3300017792 Ga0163161_10000019 Ga0163161_10000019159 329
167 3300017792 Ga0163161_10005855 Ga0163161_100058552 329
168 3300017792 Ga0163161_10065945 Ga0163161_100659453 329
169 3300017792 Ga0163161_10093388 Ga0163161_100933882 329
170 3300017792 Ga0163161_10104047 Ga0163161_101040472 329
171 3300017792 Ga0163161_10125681 Ga0163161_101256811 329
172 3300025233 Ga0209437_100144 Ga0209437_100144120 329
173 3300025245 Ga0207425_1000008 Ga0207425_1000008383 329
174 3300025258 Ga0209129_1000042 Ga0209129_1000042118 329
175 3300025292 Ga0209676_1000009 Ga0209676_1000009717 329
176 3300025292 Ga0209676_1000328 Ga0209676_100032836 329
177 3300025294 Ga0209025_1000020 Ga0209025_1000020383 329
178 3300025297 Ga0209758_1000022 Ga0209758_1000022383 329
179 3300025298 Ga0209050_1000103 Ga0209050_1000103156 329
180 3300025298 Ga0209050_1005173 Ga0209050_10051735 329
181 3300025304 Ga0209257_1000005 Ga0209257_1000005392 329
182 3300025304 Ga0209257_1031419 Ga0209257_10314192 329
183 3300025728 Ga0207655_1025401 Ga0207655_10254012 329
184 3300025912 Ga0207707_10091010 Ga0207707_100910102 329
185 3300025913 Ga0207695_10060105 Ga0207695_100601055 329
186 3300025914 Ga0207671_10052266 Ga0207671_100522662 329
187 3300025914 Ga0207671_10135470 Ga0207671_101354701 329
188 3300025917 Ga0207660_10020245 Ga0207660_100202456 329
189 3300025921 Ga0207652_10004220 Ga0207652_100042209 329
190 3300025935 Ga0207709_10000021 Ga0207709_1000002150 329
191 3300025949 Ga0207667_10000341 Ga0207667_100003416 329
192 3300025949 Ga0207667_10073219 Ga0207667_100732195 329
193 3300026078 Ga0207702_10020989 Ga0207702_100209893 329
194 3300026089 Ga0207648_10062948 Ga0207648_100629482 329
195 3300026116 Ga0207674_10162212 Ga0207674_101622123 329
196 3300028573 Ga0265334_10028390 Ga0265334_100283903 329
197 3300028666 Ga0265336_10003577 Ga0265336_100035774 329
198 3300028794 Ga0307515_10072791 Ga0307515_100727912 329
199 3300028800 Ga0265338_10069898 Ga0265338_100698982 329
200 3300031548 Ga0307408_100017440 Ga0307408_1000174402 329
201 3300031727 Ga0316576_10003385 Ga0316576_1000338512 329
202 3300031727 Ga0316576_10128046 Ga0316576_101280461 329
203 3300031728 Ga0316578_10123718 Ga0316578_101237182 329
204 3300031731 Ga0307405_10000016 Ga0307405_10000016108 329
205 3300031824 Ga0307413_10000275 Ga0307413_1000027513 329
206 3300031903 Ga0307407_10000006 Ga0307407_10000006137 329
207 3300031911 Ga0307412_10165746 Ga0307412_101657462 329
208 3300031911 Ga0307412_10312584 Ga0307412_103125841 329
209 3300031995 Ga0307409_100014594 Ga0307409_1000145944 329
210 3300032002 Ga0307416_100000032 Ga0307416_10000003247 329
211 3300032004 Ga0307414_10000466 Ga0307414_1000046611 329
212 3300032004 Ga0307414_10063829 Ga0307414_100638294 329
213 3300032004 Ga0307414_10065879 Ga0307414_100658794 329
214 3300032004 Ga0307414_10106331 Ga0307414_101063312 329
215 3300032005 Ga0307411_10000009 Ga0307411_10000009145 329
216 3300032005 Ga0307411_10007217 Ga0307411_100072173 329
217 3300033180 Ga0307510_10085790 Ga0307510_100857902 329
218 3300036712 Ga0316584_0003163 Ga0316584_0003163_3562_4560 329
219 3300037312 Ga0395899_0110019 Ga0395899_0110019_49_1050 329
220 3300037418 Ga0395900_0000478 Ga0395900_0000478_7692_8681 329
221 3300038443 Ga0395901_0032378 Ga0395901_0032378_3684_4685 329
222 3300039062 Ga0400483_009503 Ga0400483_009503_9700_10698 329
223 3300041407 Ga0439447_002818 Ga0439447_002818_3172_4170 329
224 3300041411 Ga0439466_0000082 Ga0439466_0000082_31000_31998 329
225 3300041494 Ga0451837_1371212 Ga0451837_1371212_236_1234 329
226 3300041511 Ga0451855_0352556 Ga0451855_0352556_62_1072 329
227 3300041511 Ga0451855_0704233 Ga0451855_0704233_452_1456 329
228 3300041511 Ga0451855_1641273 Ga0451855_1641273_96_1103 329
229 3300042876 Ga0451577_0000756 Ga0451577_0000756_19929_20927 329
230 3300042876 Ga0451577_0002657 Ga0451577_0002657_4273_5271 329
231 3300042876 Ga0451577_0009786 Ga0451577_0009786_2717_3715 329
232 3300042876 Ga0451577_0031246 Ga0451577_0031246_1639_2637 329
233 3300042876 Ga0451577_0044038 Ga0451577_0044038_776_1774 329
234 3300042876 Ga0451577_0361220 Ga0451577_0361220_242_1240 329
235 3300044673 Ga0453683_0000235 Ga0453683_0000235_30983_31984 329
236 3300044673 Ga0453683_0004049 Ga0453683_0004049_6436_7437 329
237 3300044673 Ga0453683_0009490 Ga0453683_0009490_4936_5934 329
238 3300044673 Ga0453683_0032152 Ga0453683_0032152_1122_2120 329
239 3300044673 Ga0453683_0055932 Ga0453683_0055932_78_1076 329
240 3300044712 Ga0453684_0000388 Ga0453684_0000388_37962_38960 329
241 3300044712 Ga0453684_0001273 Ga0453684_0001273_15610_16608 329
242 3300044712 Ga0453684_0001816 Ga0453684_0001816_35371_36369 329
243 3300044712 Ga0453684_0003762 Ga0453684_0003762_12814_13818 329
244 3300044712 Ga0453684_0014864 Ga0453684_0014864_8887_9888 329
245 3300044712 Ga0453684_0025206 Ga0453684_0025206_5502_6500 329
246 3300044712 Ga0453684_0107517 Ga0453684_0107517_2282_3283 329
247 3300044712 Ga0453684_0161268 Ga0453684_0161268_113_1111 329
248 3300044712 Ga0453684_0260485 Ga0453684_0260485_674_1672 329
249 3300044712 Ga0453684_0308384 Ga0453684_0308384_360_1358 329
250 3300045051 Ga0451576_0000003 Ga0451576_0000003_439916_440905 329
251 3300045051 Ga0451576_0000350 Ga0451576_0000350_67504_68505 329
252 3300045051 Ga0451576_0000605 Ga0451576_0000605_58970_59968 329
253 3300045051 Ga0451576_0018972 Ga0451576_0018972_2745_3746 329
254 3300045051 Ga0451576_0043257 Ga0451576_0043257_1581_2579 329
255 3300045051 Ga0451576_0044678 Ga0451576_0044678_2269_3267 329
256 3300045051 Ga0451576_0081607 Ga0451576_0081607_1668_2666 329
257 3300045051 Ga0451576_0484672 Ga0451576_0484672_252_1265 329
258 3300046460 Ga0495638_0000025 Ga0495638_0000025_64249_65244 329
259 3300046462 Ga0495651_0168853 Ga0495651_0168853_450_1439 329
260 3300046507 Ga0495606_0005062 Ga0495606_0005062_2318_3307 329
261 3300046512 Ga0495610_0000231 Ga0495610_0000231_871_1869 329
262 3300046512 Ga0495610_0000237 Ga0495610_0000237_16136_17134 329
263 3300046616 Ga0495668_0000440 Ga0495668_0000440_44139_45128 329
264 3300046660 Ga0495625_0037900 Ga0495625_0037900_776_1765 329
265 3300047443 Ga0495687_014885 Ga0495687_014885_2652_3641 329
266 3300047472 Ga0495686_0000306 Ga0495686_0000306_50493_51482 329
267 3300047472 Ga0495686_0068024 Ga0495686_0068024_760_1755 329
268 3300048919 Ga0496116_0000075 Ga0496116_0000075_38054_39052 329
269 3300048921 Ga0496118_0029434 Ga0496118_0029434_2169_3167 329
270 3300048924 Ga0496121_0053666 Ga0496121_0053666_2132_3130 329
271 3300048928 Ga0496125_0000070 Ga0496125_0000070_59549_60547 329
272 3300049129 Ga0501309_000141 Ga0501309_000141_859_1854 329
273 3300049130 Ga0501310_000607 Ga0501310_000607_216_1214 329
274 3300049705 Ga0501225_0011649 Ga0501225_0011649_453_1448 329
275 3300049758 Ga0501241_013957 Ga0501241_013957_432_1430 329
276 3300049763 Ga0501266_000013 Ga0501266_000013_147127_148125 329
277 3300053080 Ga0500635_0001449 Ga0500635_0001449_2718_3713 329
278 3300053134 Ga0500658_0000005 Ga0500658_0000005_157481_158479 329
279 3300053153 Ga0500616_0000024 Ga0500616_0000024_92453_93448 329
280 3300053153 Ga0500616_0001720 Ga0500616_0001720_15166_16155 329
281 3300053153 Ga0500616_0078775 Ga0500616_0078775_391_1389 329
282 3300053157 Ga0500624_000721 Ga0500624_000721_602_1591 329
283 3300059493 Ga0587077_001018 Ga0587077_001018_541_1530 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08541

ACP_syn_III_C

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

253

340

0.98

PF08545

ACP_syn_III

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III

123

201

0.95

PF00108

Thiolase_N

Thiolase, N-terminal domain

50

199

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ebd-assembly1.cif.gz_B crystal structure of 3-oxoacyl-[acyl-carrier-protein] synthase iii from aquifex aeolicus vf5 0.9604 6 327
1zow-assembly1.cif.gz_A crystal structure of s. aureus fabh, beta-ketoacyl carrier protein synthase iii 0.9602 5 328
5bnr-assembly1.cif.gz_A-2 e. coli fabh with small molecule inhibitor 2 0.9588 5 327
4ylt-assembly1.cif.gz_A-2 crystal structure of beta-ketoacyl-acp synthase iii (fabh) from yersinia pestis 0.957 5 327
4ryb-assembly1.cif.gz_B crystal structure of beta-ketoacyl-acp synthase iii (fabh) from neisseria meningitidis 0.9567 5 327
ID Description Score Start End Superfamily
3il4B01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9726 5 171 3.40.47.10
3il3A01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9678 5 171 3.40.47.10
af_Q2FZS0_1_313_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.965 5 329 3.40.47.10
af_Q2FZS0_1_313_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.959 5 329 3.40.47.10
af_P0A6R0_1_317_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9563 5 327 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A4Q3EMF0-F1-model_v4 3-oxoacyl-ACP synthase 0.9969 245 329 GO:0016020
GO:0016746
GO:0044550
AF-A0A349QYI6-F1-model_v4 3-oxoacyl-ACP synthase 0.9952 207 329 GO:0016746
GO:0044550
AF-A0A176TEF8-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase 3) (3-oxoacyl-[acyl-carrier-protein] synthase III) 0.9922 1 329 GO:0004315
GO:0005737
GO:0006633
GO:0033818
GO:0044550
AF-A0A399T4J9-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase 3) (3-oxoacyl-[acyl-carrier-protein] synthase III) 0.9921 1 329 GO:0004315
GO:0005737
GO:0006633
GO:0033818
GO:0044550
AF-A0A5C8LMJ0-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase 3) (3-oxoacyl-[acyl-carrier-protein] synthase III) 0.9914 1 329 GO:0004315
GO:0005737
GO:0006633
GO:0033818
GO:0044550

Feature Viewer

pLDDT pTM Quality
95.86 0.93 High
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Predicted Structure (AlphaFold2)

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