F384795

General Info

Members Datasets Scaffolds Average Seq Length
282 189 564 304

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10386984|Ga0070681_103869842
Length 332
Sequence VKETSTAVTPLHAPAAGATITTVAPAAVRPERWWRLRREERAPGEPRRLTAYIFILPAVVCFGVFTLAPLLHAAVLSLYNWDGLDPKKFVGVKNYTTAIGDPAIRSTYWHVLELFGFYTILPVCLGLLLTALLTRAPVRGLTFFRTVLFIPATISGVVVAQAWIWIYDDSGPLNSALRAVGLGSIAQGWLGSFRWALPAVGLVGSWVSYGLCMVLFIAGAQRISPSLYEAARVDGAGPFREFLAVTLPGLRGEITVALILTTVNALRSFDIVWNTTQGGPGGSTTVPSVLMYLNAFTYNKVGYACAIAVMLSASIFVVVSLIHVVSERQARI

Samples

Sample ID Description Type Environment
1 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
85 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
86 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
105 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
106 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
146 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
147 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
161 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
162 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
163 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
164 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
165 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
166 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
167 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
168 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
169 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
170 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
171 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
174 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
175 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
176 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
177 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
178 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
179 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
180 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
181 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
182 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
183 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
184 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
185 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
186 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
187 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
188 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
189 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.97
Metatranscriptomes 0
Isolates 6.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.61
Nodule 0
Rhizoplane 10.28
Rhizosphere 73.05
Stem 0
Stem Tuber 0
Unclassified 1.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070681_10386984 3300005458 Bacteria 1309
2 Ga0070683_100001052 3300005329 Bacteria 20721
3 Ga0070683_100036999 3300005329 Bacteria 4466
4 Ga0070690_100171868 3300005330 Bacteria 1492
5 Ga0070690_100301619 3300005330 Bacteria 1149
6 Ga0068869_100169444 3300005334 Bacteria 1705
7 Ga0070692_10006663 3300005345 Bacteria 5030
8 Ga0070671_100222619 3300005355 Bacteria 1600
9 Ga0070673_100263904 3300005364 Bacteria 1505
10 Ga0070659_100142692 3300005366 Bacteria 1950
11 Ga0070659_100265038 3300005366 Bacteria 1426
12 Ga0070713_100188020 3300005436 Bacteria 1859
13 Ga0070710_10080999 3300005437 Bacteria 1895
14 Ga0070663_100129177 3300005455 Bacteria 1917
15 Ga0070663_100359811 3300005455 Bacteria 1180
16 Ga0070685_10054864 3300005466 Bacteria 2314
17 Ga0070685_10062468 3300005466 Bacteria 2184
18 Ga0070684_100009671 3300005535 Bacteria 7606
19 Ga0070684_100245582 3300005535 Bacteria 1636
20 Ga0070672_100291887 3300005543 Bacteria 1381
21 Ga0070686_100242595 3300005544 Unclassified 1313
22 Ga0070693_100068933 3300005547 Bacteria 2077
23 Ga0070665_100305841 3300005548 Bacteria 1593
24 Ga0070665_100672159 3300005548 Bacteria 1049
25 Ga0068857_100001999 3300005577 Bacteria 16529
26 Ga0068857_100036500 3300005577 Bacteria 4355
27 Ga0068854_100072935 3300005578 Bacteria 2515
28 Ga0070702_100058796 3300005615 Unclassified 2229
29 Ga0070702_100179678 3300005615 Bacteria 1383
30 Ga0068852_100205839 3300005616 Bacteria 1864
31 Ga0068852_100477462 3300005616 Bacteria 1238
32 Ga0068859_100234371 3300005617 Bacteria 1924
33 Ga0068864_100189955 3300005618 Bacteria 1882
34 Ga0068866_10262245 3300005718 Bacteria 1062
35 Ga0068861_100109551 3300005719 Bacteria 2211
36 Ga0068870_10186059 3300005840 Bacteria 1250
37 Ga0081540_1002813 3300005983 Bacteria 14088
38 Ga0081540_1012685 3300005983 Bacteria 5528
39 Ga0081540_1021552 3300005983 Bacteria 3831
40 Ga0081539_10002101 3300005985 Bacteria 29682
41 Ga0070715_10026323 3300006163 Bacteria 2313
42 Ga0097621_100041932 3300006237 Bacteria 3686
43 Ga0075428_100017015 3300006844 Bacteria 8033
44 Ga0075430_100239914 3300006846 Bacteria 1502
45 Ga0075431_100019000 3300006847 Bacteria 7003
46 Ga0075433_10002426 3300006852 Bacteria 14178
47 Ga0075433_10247773 3300006852 Bacteria 1581
48 Ga0075434_100016512 3300006871 Bacteria 7098
49 Ga0075434_100026336 3300006871 Bacteria 5696
50 Ga0075429_100081303 3300006880 Bacteria 2825
51 Ga0097620_100234353 3300006931 Bacteria 1924
52 Ga0075435_100156018 3300007076 Bacteria 1921
53 Ga0111539_10090624 3300009094 Bacteria 3593
54 Ga0111539_10971313 3300009094 Bacteria 988
55 Ga0105245_10089327 3300009098 Bacteria 2832
56 Ga0105245_10132541 3300009098 Bacteria 2339
57 Ga0105245_10144511 3300009098 Bacteria 2243
58 Ga0105245_10272318 3300009098 Bacteria 1652
59 Ga0114129_10058468 3300009147 Bacteria 5392
60 Ga0114129_10402038 3300009147 Bacteria 1805
61 Ga0105243_10061611 3300009148 Bacteria 3001
62 Ga0105243_10072427 3300009148 Bacteria 2789
63 Ga0105243_10165767 3300009148 Bacteria 1909
64 Ga0105243_10187498 3300009148 Bacteria 1804
65 Ga0105241_10033299 3300009174 Bacteria 3867
66 Ga0105242_10031862 3300009176 Bacteria 4214
67 Ga0105242_10131370 3300009176 Bacteria 2162
68 Ga0105242_10330084 3300009176 Bacteria 1402
69 Ga0105248_10123653 3300009177 Bacteria 2918
70 Ga0105237_10134855 3300009545 Bacteria 2463
71 Ga0105238_10018008 3300009551 Bacteria 7182
72 Ga0105249_10022434 3300009553 Bacteria 5654
73 Ga0105249_10246313 3300009553 Bacteria 1769
74 Ga0105239_10555630 3300010375 Bacteria 1307
75 Ga0105246_10021772 3300011119 Bacteria 4129
76 Ga0105246_10070182 3300011119 Bacteria 2463
77 Ga0105246_10209759 3300011119 Bacteria 1520
78 Ga0157378_10094912 3300013297 Bacteria 2716
79 Ga0157372_10105447 3300013307 Bacteria 3224
80 Ga0157372_10146334 3300013307 Bacteria 2725
81 Ga0163163_10223655 3300014325 Bacteria 1931
82 Ga0157380_10026520 3300014326 Bacteria 4400
83 Ga0157379_10192471 3300014968 Bacteria 1843
84 Ga0157376_10093307 3300014969 Bacteria 2613
85 Ga0207642_10088409 3300025899 Bacteria 1524
86 Ga0207642_10200452 3300025899 Bacteria 1102
87 Ga0207643_10066813 3300025908 Bacteria 2063
88 Ga0207693_10047108 3300025915 Bacteria 3388
89 Ga0207660_10255824 3300025917 Bacteria 1383
90 Ga0207662_10059727 3300025918 Bacteria 2285
91 Ga0207694_10070770 3300025924 Bacteria 2726
92 Ga0207659_10180303 3300025926 Bacteria 1673
93 Ga0207687_10078828 3300025927 Bacteria 2373
94 Ga0207687_10079538 3300025927 Bacteria 2364
95 Ga0207687_10080538 3300025927 Bacteria 2351
96 Ga0207687_10094713 3300025927 Unclassified 2186
97 Ga0207644_10222441 3300025931 Bacteria 1497
98 Ga0207690_10080062 3300025932 Bacteria 2279
99 Ga0207709_10089845 3300025935 Bacteria 2004
100 Ga0207709_10173783 3300025935 Bacteria 1514
101 Ga0207669_10295428 3300025937 Bacteria 1229
102 Ga0207661_10019111 3300025944 Bacteria 5101
103 Ga0207661_10124627 3300025944 Bacteria 2199
104 Ga0207668_10341560 3300025972 Bacteria 1249
105 Ga0207639_10370511 3300026041 Bacteria 1284
106 Ga0207708_10007780 3300026075 Bacteria 7937
107 Ga0207708_10012700 3300026075 Bacteria 6279
108 Ga0207674_10007823 3300026116 Bacteria 12426
109 Ga0207674_10099870 3300026116 Bacteria 2884
110 Ga0207675_100150219 3300026118 Bacteria 2217
111 Ga0207675_100192238 3300026118 Bacteria 1958
112 Ga0207683_10138784 3300026121 Bacteria 2189
113 Ga0207698_10254215 3300026142 Bacteria 1610
114 Ga0207428_10005516 3300027907 Bacteria 11786
115 Ga0268266_10350520 3300028379 Bacteria 1387
116 Ga0307517_10040098 3300028786 Bacteria 5114
117 Ga0307515_10000038 3300028794 Bacteria 331376
118 Ga0307515_10019990 3300028794 Bacteria 11992
119 Ga0307515_10051286 3300028794 Bacteria 6157
120 Ga0307512_10004326 3300030522 Bacteria 15668
121 Ga0307512_10005295 3300030522 Bacteria 13533
122 Ga0307512_10020661 3300030522 Bacteria 5950
123 Ga0307512_10024130 3300030522 Bacteria 5418
124 Ga0307513_10001429 3300031456 Bacteria 34323
125 Ga0307513_10014515 3300031456 Bacteria 9606
126 Ga0307509_10278362 3300031507 Bacteria 1436
127 Ga0307508_10017821 3300031616 Bacteria 6459
128 Ga0307508_10023714 3300031616 Bacteria 5572
129 Ga0307508_10038147 3300031616 Bacteria 4319
130 Ga0307514_10002159 3300031649 Bacteria 21138
131 Ga0307514_10034989 3300031649 Bacteria 4000
132 Ga0307516_10004102 3300031730 Bacteria 18174
133 Ga0307516_10025913 3300031730 Bacteria 5962
134 Ga0307516_10066597 3300031730 Bacteria 3474
135 Ga0307516_10076538 3300031730 Bacteria 3198
136 Ga0307516_10126157 3300031730 Bacteria 2344
137 Ga0307406_10076299 3300031901 Bacteria 2214
138 Ga0307406_10237044 3300031901 Bacteria 1366
139 Ga0307416_100046604 3300032002 Bacteria 3423
140 Ga0307416_100159763 3300032002 Bacteria 2081
141 Ga0307415_100276717 3300032126 Bacteria 1378
142 Ga0307507_10159236 3300033179 Bacteria 1673
143 Ga0307510_10041473 3300033180 Bacteria 5031
144 Ga0395900_0027450 3300037418 Bacteria 5832
145 Ga0395898_0008948 3300037466 Bacteria 10543
146 Ga0395905_0034700 3300037471 Bacteria 4738
147 Ga0395901_0017617 3300038443 Bacteria 7294
148 Ga0466967_0163125 3300045976 Bacteria 2093
149 Ga0495638_0192703 3300046460 Bacteria 1156
150 Ga0495653_0060039 3300046463 Bacteria 2882
151 Ga0495594_0222460 3300046499 Bacteria 1076
152 Ga0495632_0114011 3300046519 Bacteria 1267
153 Ga0495643_0109931 3300046522 Bacteria 1402
154 Ga0495645_0099421 3300046543 Bacteria 2070
155 Ga0495670_0097567 3300046691 Bacteria 1510
156 Ga0495660_0031996 3300046810 Bacteria 2956
157 Ga0495687_038045 3300047443 Bacteria 2138
158 Ga0495685_024628 3300047447 Bacteria 2071
159 Ga0495686_0066258 3300047472 Bacteria 2232
160 Ga0496100_0053599 3300048903 Bacteria 2627
161 Ga0496101_0014596 3300048904 Bacteria 5281
162 Ga0496101_0205096 3300048904 Bacteria 1525
163 Ga0496102_0107227 3300048905 Bacteria 2601
164 Ga0496102_0345354 3300048905 Bacteria 1401
165 Ga0496103_0060756 3300048906 Bacteria 2349
166 Ga0496104_0015927 3300048907 Bacteria 6822
167 Ga0496104_0054808 3300048907 Bacteria 3769
168 Ga0496105_0006853 3300048908 Bacteria 8765
169 Ga0496105_0031340 3300048908 Bacteria 4359
170 Ga0496106_0003160 3300048909 Bacteria 12295
171 Ga0496106_0022174 3300048909 Bacteria 4715
172 Ga0496106_0022180 3300048909 Bacteria 4715
173 Ga0496106_0025192 3300048909 Bacteria 4426
174 Ga0496107_0003807 3300048910 Bacteria 10131
175 Ga0496107_0023711 3300048910 Bacteria 4337
176 Ga0496107_0039342 3300048910 Bacteria 3392
177 Ga0496108_0000008 3300048911 Bacteria 294619
178 Ga0496108_0222936 3300048911 Bacteria 1638
179 Ga0496109_0027681 3300048912 Bacteria 5065
180 Ga0496110_0035618 3300048913 Bacteria 4319
181 Ga0496110_0055935 3300048913 Bacteria 3472
182 Ga0496111_0062033 3300048914 Bacteria 2710
183 Ga0496112_0014925 3300048915 Bacteria 7229
184 Ga0496112_0311528 3300048915 Bacteria 1519
185 Ga0496114_0110448 3300048917 Bacteria 2355
186 Ga0496114_0154914 3300048917 Bacteria 1989
187 Ga0496115_0104292 3300048918 Bacteria 2327
188 Ga0496121_0009615 3300048924 Bacteria 11076
189 Ga0496122_0005581 3300048925 Bacteria 14894
190 Ga0496123_0001045 3300048926 Bacteria 41909
191 Ga0496123_0058540 3300048926 Bacteria 2498
192 Ga0496125_0000192 3300048928 Bacteria 130383
193 Ga0496125_0001000 3300048928 Bacteria 44080
194 Ga0501033_0001236 3300049570 Bacteria 22933
195 Ga0501033_0125343 3300049570 Bacteria 1862
196 Ga0501033_0175676 3300049570 Bacteria 1537
197 Ga0501034_0148491 3300049571 Bacteria 2320
198 Ga0501034_0290689 3300049571 Bacteria 1572
199 Ga0501036_0474585 3300049572 Bacteria 1041
200 Ga0501037_0042651 3300049573 Bacteria 3334
201 Ga0501037_0066628 3300049573 Bacteria 2622
202 Ga0501038_0012604 3300049574 Bacteria 7727
203 Ga0501038_0018825 3300049574 Bacteria 6233
204 Ga0501039_0121009 3300049575 Bacteria 2051
205 Ga0501041_0094675 3300049577 Bacteria 1845
206 Ga0501042_0000632 3300049578 Bacteria 18828
207 Ga0501043_0005134 3300049579 Bacteria 10594
208 Ga0501043_0033832 3300049579 Bacteria 4022
209 Ga0501043_0459586 3300049579 Bacteria 955
210 Ga0501047_0033903 3300049581 Bacteria 4928
211 Ga0501047_0160014 3300049581 Bacteria 2123
212 Ga0501047_0275093 3300049581 Bacteria 1529
213 Ga0501048_0157865 3300049582 Bacteria 1604
214 Ga0501067_0029865 3300049583 Bacteria 3021
215 Ga0501068_0025733 3300049584 Bacteria 3463
216 Ga0501069_0004567 3300049585 Bacteria 7157
217 Ga0501069_0042192 3300049585 Bacteria 2523
218 Ga0501069_0172246 3300049585 Bacteria 1249
219 Ga0501070_0010453 3300049586 Bacteria 7847
220 Ga0501070_0340921 3300049586 Bacteria 1217
221 Ga0501070_0371601 3300049586 Bacteria 1159
222 Ga0501072_0012452 3300049588 Bacteria 6501
223 Ga0501072_0282489 3300049588 Bacteria 1320
224 Ga0501073_0061191 3300049589 Bacteria 2627
225 Ga0501074_0053233 3300049590 Bacteria 2920
226 Ga0501075_0021576 3300049591 Bacteria 4697
227 Ga0501075_0109440 3300049591 Bacteria 2100
228 Ga0501076_0123095 3300049592 Bacteria 2100
229 Ga0501077_0052990 3300049593 Bacteria 2575
230 Ga0501077_0075811 3300049593 Bacteria 2130
231 Ga0501079_0123748 3300049741 Bacteria 2011
232 Ga0501080_0044708 3300049742 Bacteria 4122
233 Ga0501083_0010244 3300049744 Bacteria 6606
234 Ga0501083_0038629 3300049744 Bacteria 3244
235 Ga0501035_0142809 3300049822 Bacteria 2080
236 Ga0501044_0024548 3300049823 Bacteria 6395
237 Ga0501044_0275129 3300049823 Bacteria 1618
238 nmdc:mga05p37_48589_c1 3300050507 Bacteria 5218
239 nmdc:mga06r32_100601_c1 3300050510 Bacteria 2836
240 nmdc:mga08y16_130842_c1 3300050511 Bacteria 2610
241 nmdc:mga0n895_29215_c1 3300050512 Bacteria 5256
242 nmdc:mga0n895_45995_c1 3300050512 Bacteria 4262
243 nmdc:mga0n895_9988_c1 3300050512 Bacteria 8352
244 nmdc:mga0rr50_233111_c1 3300050513 Bacteria 1524
245 nmdc:mga0rr50_287210_c1 3300050513 Bacteria 1374
246 nmdc:mga08x19_102403_c1 3300050514 Bacteria 1901
247 nmdc:mga0a205_44034_c1 3300050515 Bacteria 4302
248 nmdc:mga0a205_61009_c1 3300050515 Bacteria 3642
249 nmdc:mga0a205_84168_c1 3300050515 Unclassified 3072
250 Ga0495595_0158277 3300053084 Bacteria 1117
251 Ga0500646_0084026 3300053090 Bacteria 976
252 Ga0500583_0078030 3300053092 Bacteria 1596
253 Ga0500569_003360 3300053109 Bacteria 3263
254 Ga0500569_111026 3300053109 Bacteria 906
255 Ga0500628_002933 3300053129 Bacteria 2803
256 Ga0500652_006867 3300053131 Bacteria 3691
257 Ga0500658_0113767 3300053134 Bacteria 1193
258 Ga0500561_0004893 3300053137 Bacteria 2448
259 Ga0500600_0073472 3300053149 Bacteria 1869
260 Ga0500600_0121692 3300053149 Bacteria 1343
261 Ga0500633_0058758 3300053160 Bacteria 1347
262 Ga0500634_0122462 3300053161 Bacteria 1263
263 Ga0500587_005178 3300053739 Bacteria 1764
264 Ga0501082_0014998 3300060353 Bacteria 6677
265 Ga0466962_0036889 3300061719 Bacteria 2340
266 2515851286 2515154155 Bacteria 7985436
267 2676475778 2675903058 Bacteria 6822861
268 2676480913 2675903059 Bacteria 8644972
269 2808915896 2808606375 Bacteria 9466072
270 2816504581 2816332139 Bacteria 9138787
271 2827630339 2827628540 Bacteria 6858585
272 2868090145 2868088558 Bacteria 7609351
273 2868092430 2868088558 Bacteria 7609351
274 2887445588 2887443736 Bacteria 4426037
275 2946035949 2946033335 Bacteria 3835514
276 8008575250 8008574985 Bacteria 7815457
277 8025533342 8025530807 Bacteria 8495698
278 8047899174 8047893842 Bacteria 11723082
279 8048129861 8048127548 Bacteria 11053136
280 8048359745 8048356638 Bacteria 11044339
281 8048376136 8048369669 Bacteria 11666822
282 8048385195 8048379754 Bacteria 11877923
283 Ga0070681_10386984
284 Ga0070683_100001052
285 Ga0070683_100036999
286 Ga0070690_100171868
287 Ga0070690_100301619
288 Ga0068869_100169444
289 Ga0070692_10006663
290 Ga0070671_100222619
291 Ga0070673_100263904
292 Ga0070659_100142692
293 Ga0070659_100265038
294 Ga0070713_100188020
295 Ga0070710_10080999
296 Ga0070663_100129177
297 Ga0070663_100359811
298 Ga0070685_10054864
299 Ga0070685_10062468
300 Ga0070684_100009671
301 Ga0070684_100245582
302 Ga0070672_100291887
303 Ga0070686_100242595
304 Ga0070693_100068933
305 Ga0070665_100305841
306 Ga0070665_100672159
307 Ga0068857_100001999
308 Ga0068857_100036500
309 Ga0068854_100072935
310 Ga0070702_100058796
311 Ga0070702_100179678
312 Ga0068852_100205839
313 Ga0068852_100477462
314 Ga0068859_100234371
315 Ga0068864_100189955
316 Ga0068866_10262245
317 Ga0068861_100109551
318 Ga0068870_10186059
319 Ga0081540_1002813
320 Ga0081540_1012685
321 Ga0081540_1021552
322 Ga0081539_10002101
323 Ga0070715_10026323
324 Ga0097621_100041932
325 Ga0075428_100017015
326 Ga0075430_100239914
327 Ga0075431_100019000
328 Ga0075433_10002426
329 Ga0075433_10247773
330 Ga0075434_100016512
331 Ga0075434_100026336
332 Ga0075429_100081303
333 Ga0097620_100234353
334 Ga0075435_100156018
335 Ga0111539_10090624
336 Ga0111539_10971313
337 Ga0105245_10089327
338 Ga0105245_10132541
339 Ga0105245_10144511
340 Ga0105245_10272318
341 Ga0114129_10058468
342 Ga0114129_10402038
343 Ga0105243_10061611
344 Ga0105243_10072427
345 Ga0105243_10165767
346 Ga0105243_10187498
347 Ga0105241_10033299
348 Ga0105242_10031862
349 Ga0105242_10131370
350 Ga0105242_10330084
351 Ga0105248_10123653
352 Ga0105237_10134855
353 Ga0105238_10018008
354 Ga0105249_10022434
355 Ga0105249_10246313
356 Ga0105239_10555630
357 Ga0105246_10021772
358 Ga0105246_10070182
359 Ga0105246_10209759
360 Ga0157378_10094912
361 Ga0157372_10105447
362 Ga0157372_10146334
363 Ga0163163_10223655
364 Ga0157380_10026520
365 Ga0157379_10192471
366 Ga0157376_10093307
367 Ga0207642_10088409
368 Ga0207642_10200452
369 Ga0207643_10066813
370 Ga0207693_10047108
371 Ga0207660_10255824
372 Ga0207662_10059727
373 Ga0207694_10070770
374 Ga0207659_10180303
375 Ga0207687_10078828
376 Ga0207687_10079538
377 Ga0207687_10080538
378 Ga0207687_10094713
379 Ga0207644_10222441
380 Ga0207690_10080062
381 Ga0207709_10089845
382 Ga0207709_10173783
383 Ga0207669_10295428
384 Ga0207661_10019111
385 Ga0207661_10124627
386 Ga0207668_10341560
387 Ga0207639_10370511
388 Ga0207708_10007780
389 Ga0207708_10012700
390 Ga0207674_10007823
391 Ga0207674_10099870
392 Ga0207675_100150219
393 Ga0207675_100192238
394 Ga0207683_10138784
395 Ga0207698_10254215
396 Ga0207428_10005516
397 Ga0268266_10350520
398 Ga0307517_10040098
399 Ga0307515_10000038
400 Ga0307515_10019990
401 Ga0307515_10051286
402 Ga0307512_10004326
403 Ga0307512_10005295
404 Ga0307512_10020661
405 Ga0307512_10024130
406 Ga0307513_10001429
407 Ga0307513_10014515
408 Ga0307509_10278362
409 Ga0307508_10017821
410 Ga0307508_10023714
411 Ga0307508_10038147
412 Ga0307514_10002159
413 Ga0307514_10034989
414 Ga0307516_10004102
415 Ga0307516_10025913
416 Ga0307516_10066597
417 Ga0307516_10076538
418 Ga0307516_10126157
419 Ga0307406_10076299
420 Ga0307406_10237044
421 Ga0307416_100046604
422 Ga0307416_100159763
423 Ga0307415_100276717
424 Ga0307507_10159236
425 Ga0307510_10041473
426 Ga0395900_0027450
427 Ga0395898_0008948
428 Ga0395905_0034700
429 Ga0395901_0017617
430 Ga0466967_0163125
431 Ga0495638_0192703
432 Ga0495653_0060039
433 Ga0495594_0222460
434 Ga0495632_0114011
435 Ga0495643_0109931
436 Ga0495645_0099421
437 Ga0495670_0097567
438 Ga0495660_0031996
439 Ga0495687_038045
440 Ga0495685_024628
441 Ga0495686_0066258
442 Ga0496100_0053599
443 Ga0496101_0014596
444 Ga0496101_0205096
445 Ga0496102_0107227
446 Ga0496102_0345354
447 Ga0496103_0060756
448 Ga0496104_0015927
449 Ga0496104_0054808
450 Ga0496105_0006853
451 Ga0496105_0031340
452 Ga0496106_0003160
453 Ga0496106_0022174
454 Ga0496106_0022180
455 Ga0496106_0025192
456 Ga0496107_0003807
457 Ga0496107_0023711
458 Ga0496107_0039342
459 Ga0496108_0000008
460 Ga0496108_0222936
461 Ga0496109_0027681
462 Ga0496110_0035618
463 Ga0496110_0055935
464 Ga0496111_0062033
465 Ga0496112_0014925
466 Ga0496112_0311528
467 Ga0496114_0110448
468 Ga0496114_0154914
469 Ga0496115_0104292
470 Ga0496121_0009615
471 Ga0496122_0005581
472 Ga0496123_0001045
473 Ga0496123_0058540
474 Ga0496125_0000192
475 Ga0496125_0001000
476 Ga0501033_0001236
477 Ga0501033_0125343
478 Ga0501033_0175676
479 Ga0501034_0148491
480 Ga0501034_0290689
481 Ga0501036_0474585
482 Ga0501037_0042651
483 Ga0501037_0066628
484 Ga0501038_0012604
485 Ga0501038_0018825
486 Ga0501039_0121009
487 Ga0501041_0094675
488 Ga0501042_0000632
489 Ga0501043_0005134
490 Ga0501043_0033832
491 Ga0501043_0459586
492 Ga0501047_0033903
493 Ga0501047_0160014
494 Ga0501047_0275093
495 Ga0501048_0157865
496 Ga0501067_0029865
497 Ga0501068_0025733
498 Ga0501069_0004567
499 Ga0501069_0042192
500 Ga0501069_0172246
501 Ga0501070_0010453
502 Ga0501070_0340921
503 Ga0501070_0371601
504 Ga0501072_0012452
505 Ga0501072_0282489
506 Ga0501073_0061191
507 Ga0501074_0053233
508 Ga0501075_0021576
509 Ga0501075_0109440
510 Ga0501076_0123095
511 Ga0501077_0052990
512 Ga0501077_0075811
513 Ga0501079_0123748
514 Ga0501080_0044708
515 Ga0501083_0010244
516 Ga0501083_0038629
517 Ga0501035_0142809
518 Ga0501044_0024548
519 Ga0501044_0275129
520 nmdc:mga05p37_48589_c1
521 nmdc:mga06r32_100601_c1
522 nmdc:mga08y16_130842_c1
523 nmdc:mga0n895_29215_c1
524 nmdc:mga0n895_45995_c1
525 nmdc:mga0n895_9988_c1
526 nmdc:mga0rr50_233111_c1
527 nmdc:mga0rr50_287210_c1
528 nmdc:mga08x19_102403_c1
529 nmdc:mga0a205_44034_c1
530 nmdc:mga0a205_61009_c1
531 nmdc:mga0a205_84168_c1
532 Ga0495595_0158277
533 Ga0500646_0084026
534 Ga0500583_0078030
535 Ga0500569_003360
536 Ga0500569_111026
537 Ga0500628_002933
538 Ga0500652_006867
539 Ga0500658_0113767
540 Ga0500561_0004893
541 Ga0500600_0073472
542 Ga0500600_0121692
543 Ga0500633_0058758
544 Ga0500634_0122462
545 Ga0500587_005178
546 Ga0501082_0014998
547 Ga0466962_0036889
548 2515851286
549 2676475778
550 2676480913
551 2808915896
552 2816504581
553 2827630339
554 2868090145
555 2868092430
556 2887445588
557 2946035949
558 8008575250
559 8025533342
560 8047899174
561 8048129861
562 8048359745
563 8048376136
564 8048385195

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

122

331

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hps-assembly1.cif.gz_A lpqy-sugabc in state 5 0.921 22 301
8ja7-assembly1.cif.gz_A cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.92 22 301
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.9085 22 299
8hpl-assembly1.cif.gz_A lpqy-sugabc in state 1 0.8982 22 301
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.8898 22 299
ID Description Score Start End Superfamily
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9607 62 302 1.10.3720.10
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9572 63 302 1.10.3720.10
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9451 62 302 1.10.3720.10
af_P10905_52_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9377 62 299 1.10.3720.10
af_I6XFF3_60_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9343 62 305 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A543CY62-F1-model_v4 Carbohydrate ABC transporter membrane protein 1 (CUT1 family) 0.9667 27 302 GO:0005886
GO:0055085
AF-A0A7K2WRX8-F1-model_v4 ABC transporter permease subunit 0.9645 39 300 GO:0005886
GO:0055085
AF-A0A2G6HGI3-F1-model_v4 Sugar ABC transporter permease 0.9642 85 303 GO:0005886
GO:0055085
AF-G7M5A5-F1-model_v4 ABC-type transporter, integral membrane subunit 0.9637 30 300 GO:0005886
GO:0055085
AF-A0A4R0IY25-F1-model_v4 Sugar ABC transporter permease 0.9636 36 300 GO:0005886
GO:0055085

Map