F384554

General Info

Members Datasets Scaffolds Average Seq Length
281 219 207 459

Family's Representative Sequence

Representative Sequence 3300048928|Ga0496125_0000061|Ga0496125_0000061_158999_160369
Length 456
Sequence MTEHAFDLVVLGGGSGGYAAALRAAELGRSVAVIEKDKVGGTCLHRGCVPTKALLHSAEVADHVRDAASVGVTATFGGVDAAGVTAYREGIVQKKYAGLQGLLKARGITVVAGEGRLAGGPAVAVGDDLYRGADVVVATGSYSRVLPGLEVGGRILTSEQALALDEVPERVIILGGGVIGVEFASIWRSFGAEVTIVEALDHLVPNEDLTLSKGLERAFRKRGISSRLGVRFEAAQQTADDVSVQLADGTELRADYLLVAIGRGPATAGLGLEEAGVQIERGFVSVDASLQTSVPHVWAVGDIVAGLQLAHRGFQQGIFVAEQIAGLAPTPIDETTIPRITYSSPEVASVGLTEARARELHGDRVVAFEYNLAGNAKSEIIGTGGVAKVIRVADGPIVGVHLIGDRVGELITEGQLVVGWEAHPEDLAPLVHAHPTQSEALGEAFLALAGKPLHSL

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
3 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
4 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
5 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
6 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
7 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
8 2643221566 Microbacterium sp. Root166 Isolate Unclassified
9 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
10 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
11 2643221711 Terrabacter sp. Root85 Isolate Unclassified
12 2643221721 Oerskovia sp. Root918 Isolate Unclassified
13 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
14 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
15 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
16 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
17 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
18 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
19 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
20 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
21 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
22 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
23 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
24 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
25 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
26 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
27 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
28 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
29 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
30 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
31 2855683550 Micromonospora sp. RP3T Isolate Unclassified
32 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
33 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
34 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
35 2858868258 Micromonospora sp. MH33 Isolate Unclassified
36 2858882152 Micromonospora noduli MED15 Isolate Nodule
37 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
38 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
39 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
40 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
41 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
42 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
43 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
44 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
45 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
46 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
47 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
48 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
49 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
50 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
51 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
52 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
53 2902582711 Micromonospora sp. AP08 Isolate Unclassified
54 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
55 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
56 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
57 2919069694 Microbacterium sp. 1154 Isolate Unclassified
58 2919395869 Microbacterium resistens 2980 Isolate Unclassified
59 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
60 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
61 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
62 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
63 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
64 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
65 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
66 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
67 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
68 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
69 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
70 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
71 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
72 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
73 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
74 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
75 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
76 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
77 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
78 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
79 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
80 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
81 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
82 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
83 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
84 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
85 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
86 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
87 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
88 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
89 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
90 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
91 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
92 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
93 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
94 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
95 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
96 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
97 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
98 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
99 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
100 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
101 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
102 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
103 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
104 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
105 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
127 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
130 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
131 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
132 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
133 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
134 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
135 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
136 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
137 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
138 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
139 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
140 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
141 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
142 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
143 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
144 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
147 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
148 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
149 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
150 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
151 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
152 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
153 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
154 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
155 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
156 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
159 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
160 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
161 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
162 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
163 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
164 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
165 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
166 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
167 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
172 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
173 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
177 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
178 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
179 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
180 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
181 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
182 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
185 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
186 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
187 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
188 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
193 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
198 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
199 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
200 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
201 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
202 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
203 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
205 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
206 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
207 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
208 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
209 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
210 649633069 Micromonospora sp. L5 Isolate Unclassified
211 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
212 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
213 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
214 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
215 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
216 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
217 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
218 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
219 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 73.31
Metatranscriptomes 0.36
Isolates 26.33

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 2.49
Nodule 1.78
Rhizoplane 13.52
Rhizosphere 54.45
Stem 0
Stem Tuber 0.36
Unclassified 27.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000586 3300003203 Bacteria 17134
2 Ga0070683_100163099 3300005329 Bacteria 2115
3 Ga0068868_100043179 3300005338 Bacteria 3521
4 Ga0068868_100075786 3300005338 Bacteria 2689
5 Ga0070668_100015529 3300005347 Bacteria 5693
6 Ga0070668_100019250 3300005347 Bacteria 5137
7 Ga0070675_100087906 3300005354 Bacteria 2599
8 Ga0070674_100053383 3300005356 Bacteria 2790
9 Ga0070659_100077117 3300005366 Bacteria 2657
10 Ga0070700_100080556 3300005441 Bacteria 2101
11 Ga0070663_100005454 3300005455 Bacteria 7555
12 Ga0070663_100008881 3300005455 Bacteria 6204
13 Ga0070679_100156993 3300005530 Bacteria 2250
14 Ga0070665_100316263 3300005548 Bacteria 1565
15 Ga0070664_100151789 3300005564 Bacteria 2045
16 Ga0068857_100205896 3300005577 Bacteria 1794
17 Ga0070702_100001753 3300005615 Bacteria 9019
18 Ga0068861_100036403 3300005719 Bacteria 3652
19 Ga0068851_10050164 3300005834 Bacteria 2118
20 Ga0068860_100060154 3300005843 Bacteria 3611
21 Ga0081540_1005397 3300005983 Bacteria 9550
22 Ga0081539_10000309 3300005985 Bacteria 109561
23 Ga0081539_10000432 3300005985 Bacteria 89138
24 Ga0070717_10192205 3300006028 Bacteria 1784
25 Ga0075368_10001780 3300006042 Bacteria 6930
26 Ga0075368_10013772 3300006042 Bacteria 2974
27 Ga0075364_10080730 3300006051 Bacteria 2150
28 Ga0070712_100100540 3300006175 Bacteria 2137
29 Ga0068865_100114514 3300006881 Bacteria 1995
30 Ga0097620_100028552 3300006931 Bacteria 5593
31 Ga0114129_10000004 3300009147 Bacteria 160944
32 Ga0114129_10211011 3300009147 Bacteria 2625
33 Ga0105243_10053768 3300009148 Bacteria 3195
34 Ga0105242_10052745 3300009176 Bacteria 3320
35 Ga0105237_10236337 3300009545 Bacteria 1828
36 Ga0105249_10155513 3300009553 Bacteria 2205
37 Ga0105239_10196542 3300010375 Bacteria 2259
38 Ga0157369_10226811 3300013105 Bacteria 1954
39 Ga0157369_10296982 3300013105 Bacteria 1681
40 Ga0157378_10018928 3300013297 Bacteria 6052
41 Ga0163162_10011187 3300013306 Bacteria 8745
42 Ga0157372_10032798 3300013307 Bacteria 5698
43 Ga0157375_10173670 3300013308 Bacteria 2304
44 Ga0157380_10154492 3300014326 Bacteria 1987
45 Ga0163161_10056664 3300017792 Bacteria 2847
46 Ga0213873_10002887 3300021358 Bacteria 3032
47 Ga0213875_10000060 3300021388 Bacteria 135020
48 Ga0213875_10006714 3300021388 Bacteria 6012
49 Ga0213875_10007972 3300021388 Bacteria 5446
50 Ga0207656_10032369 3300025321 Bacteria 2172
51 Ga0207688_10001942 3300025901 Bacteria 11076
52 Ga0207645_10049293 3300025907 Bacteria 2689
53 Ga0207657_10070738 3300025919 Bacteria 2956
54 Ga0207657_10165063 3300025919 Bacteria 1797
55 Ga0207687_10013201 3300025927 Bacteria 5396
56 Ga0207664_10001096 3300025929 Bacteria 18076
57 Ga0207644_10003695 3300025931 Bacteria 9922
58 Ga0207706_10053583 3300025933 Bacteria 3561
59 Ga0207706_10071416 3300025933 Bacteria 3053
60 Ga0207686_10022871 3300025934 Bacteria 3603
61 Ga0207704_10035650 3300025938 Bacteria 2853
62 Ga0207679_10080968 3300025945 Bacteria 2481
63 Ga0207679_10214102 3300025945 Bacteria 1618
64 Ga0207712_10031204 3300025961 Bacteria 3587
65 Ga0207668_10002823 3300025972 Bacteria 10167
66 Ga0207668_10009923 3300025972 Bacteria 5725
67 Ga0207640_10044700 3300025981 Bacteria 2840
68 Ga0207677_10179449 3300026023 Bacteria 1664
69 Ga0207678_10000897 3300026067 Bacteria 27312
70 Ga0207708_10013146 3300026075 Bacteria 6178
71 Ga0207708_10096027 3300026075 Bacteria 2290
72 Ga0207641_10028609 3300026088 Bacteria 4606
73 Ga0207675_100168330 3300026118 Bacteria 2093
74 Ga0207683_10159504 3300026121 Bacteria 2038
75 Ga0207698_10200342 3300026142 Bacteria 1787
76 Ga0207428_10102003 3300027907 Bacteria 2216
77 Ga0268266_10040454 3300028379 Bacteria 3973
78 Ga0268266_10120072 3300028379 Bacteria 2338
79 Ga0268264_10045971 3300028381 Bacteria 3626
80 Ga0307515_10069424 3300028794 Bacteria 4817
81 Ga0307512_10095666 3300030522 Bacteria 2042
82 Ga0265340_10001063 3300031247 Bacteria 15626
83 Ga0307513_10133374 3300031456 Bacteria 2424
84 Ga0316576_10003663 3300031727 Bacteria 9061
85 Ga0316576_10004483 3300031727 Bacteria 8386
86 Ga0316576_10021429 3300031727 Bacteria 4470
87 Ga0307413_10043990 3300031824 Bacteria 2636
88 Ga0307518_10001495 3300031838 Bacteria 17352
89 Ga0307410_10006888 3300031852 Bacteria 6173
90 Ga0307410_10098739 3300031852 Bacteria 2089
91 Ga0307407_10013507 3300031903 Bacteria 3968
92 Ga0307409_100022003 3300031995 Bacteria 4386
93 Ga0307409_100115463 3300031995 Bacteria 2260
94 Ga0307409_100145875 3300031995 Bacteria 2047
95 Ga0307409_100255579 3300031995 Bacteria 1604
96 Ga0307416_100055139 3300032002 Bacteria 3199
97 Ga0307414_10096655 3300032004 Bacteria 2211
98 Ga0307507_10009667 3300033179 Bacteria 12744
99 Ga0307510_10062920 3300033180 Bacteria 3785
100 Ga0316574_0002081 3300035398 Bacteria 9899
101 Ga0316574_0050582 3300035398 Bacteria 2587
102 Ga0316574_0077198 3300035398 Bacteria 2111
103 Ga0316574_0078710 3300035398 Bacteria 2090
104 Ga0316584_0007915 3300036712 Bacteria 7293
105 Ga0316584_0075342 3300036712 Bacteria 2529
106 Ga0395900_0156425 3300037418 Bacteria 2328
107 Ga0436364_0061454 3300037853 Bacteria 95434
108 Ga0436364_0365879 3300037853 Bacteria 18903
109 Ga0436364_1086758 3300037853 Bacteria 2397
110 Ga0400485_12971 3300038735 Bacteria 36771
111 Ga0400488_59008 3300038741 Bacteria 11179
112 Ga0400486_16210 3300038742 Bacteria 35753
113 Ga0436365_1922857 3300039437 Bacteria 7320
114 Ga0436362_0530562 3300039453 Bacteria 67776
115 Ga0451791_0487210 3300041451 Bacteria 2723
116 Ga0451797_0806211 3300041453 Bacteria 1917
117 Ga0451853_1612418 3300041512 Bacteria 2604
118 Ga0466972_0009089 3300044658 Bacteria 4990
119 Ga0466965_0004058 3300044683 Bacteria 6496
120 Ga0466965_0031001 3300044683 Bacteria 2606
121 Ga0466966_0028946 3300044684 Bacteria 3606
122 Ga0466961_0100285 3300044693 Bacteria 1824
123 Ga0466968_0000065 3300044735 Bacteria 31445
124 Ga0466970_0079593 3300044765 Bacteria 1769
125 Ga0466970_0083780 3300044765 Bacteria 1726
126 Ga0466960_0000244 3300044901 Bacteria 18862
127 Ga0466960_0031482 3300044901 Bacteria 2448
128 Ga0466959_0047174 3300045049 Bacteria 3169
129 Ga0466958_0000068 3300045836 Bacteria 30629
130 Ga0466967_0001692 3300045976 Bacteria 13113
131 Ga0466967_0201771 3300045976 Bacteria 1884
132 Ga0495653_0123882 3300046463 Bacteria 1838
133 Ga0496100_0078270 3300048903 Bacteria 2225
134 Ga0496101_0033667 3300048904 Bacteria 3615
135 Ga0496101_0052393 3300048904 Bacteria 2942
136 Ga0496102_0002825 3300048905 Bacteria 14781
137 Ga0496102_0003449 3300048905 Bacteria 13402
138 Ga0496102_0032610 3300048905 Bacteria 4679
139 Ga0496102_0073121 3300048905 Bacteria 3151
140 Ga0496103_0020822 3300048906 Bacteria 3943
141 Ga0496103_0029653 3300048906 Bacteria 3325
142 Ga0496103_0050080 3300048906 Bacteria 2583
143 Ga0496104_0005043 3300048907 Bacteria 11519
144 Ga0496104_0087337 3300048907 Bacteria 2978
145 Ga0496104_0104077 3300048907 Bacteria 2719
146 Ga0496105_0034185 3300048908 Bacteria 4180
147 Ga0496105_0036372 3300048908 Bacteria 4056
148 Ga0496105_0037062 3300048908 Bacteria 4017
149 Ga0496107_0021614 3300048910 Bacteria 4548
150 Ga0496108_0270519 3300048911 Bacteria 1479
151 Ga0496109_0030911 3300048912 Bacteria 4801
152 Ga0496109_0064330 3300048912 Bacteria 3356
153 Ga0496109_0146500 3300048912 Bacteria 2209
154 Ga0496110_0050571 3300048913 Bacteria 3650
155 Ga0496110_0164371 3300048913 Bacteria 2012
156 Ga0496111_0017282 3300048914 Bacteria 4986
157 Ga0496111_0095571 3300048914 Bacteria 2180
158 Ga0496111_0110562 3300048914 Bacteria 2024
159 Ga0496112_0013487 3300048915 Bacteria 7547
160 Ga0496112_0133103 3300048915 Bacteria 2457
161 Ga0496113_0028862 3300048916 Bacteria 3996
162 Ga0496113_0033055 3300048916 Bacteria 3763
163 Ga0496114_0021212 3300048917 Bacteria 5283
164 Ga0496114_0035158 3300048917 Bacteria 4136
165 Ga0496114_0051835 3300048917 Bacteria 3417
166 Ga0496114_0056691 3300048917 Bacteria 3270
167 Ga0496114_0095286 3300048917 Bacteria 2532
168 Ga0496115_0085507 3300048918 Bacteria 2572
169 Ga0496119_0002245 3300048922 Bacteria 21498
170 Ga0496119_0039117 3300048922 Bacteria 3051
171 Ga0496119_0061373 3300048922 Bacteria 2245
172 Ga0496120_0002895 3300048923 Bacteria 16423
173 Ga0496120_0003062 3300048923 Bacteria 15780
174 Ga0496122_0006445 3300048925 Bacteria 13467
175 Ga0496123_0002583 3300048926 Bacteria 22036
176 Ga0496124_0002946 3300048927 Bacteria 21385
177 Ga0496124_0033785 3300048927 Bacteria 4496
178 Ga0496125_0000061 3300048928 Bacteria 262739
179 Ga0496125_0002347 3300048928 Bacteria 24835
180 Ga0496126_0164808 3300048929 Bacteria 1892
181 Ga0501318_004728 3300049534 Bacteria 1319
182 Ga0501031_0045072 3300049568 Bacteria 2877
183 Ga0501036_0007213 3300049572 Bacteria 9051
184 Ga0501036_0060684 3300049572 Bacteria 3203
185 Ga0501038_0111716 3300049574 Bacteria 2263
186 Ga0501039_0003524 3300049575 Bacteria 11721
187 Ga0501041_0000727 3300049577 Bacteria 17532
188 Ga0501041_0078272 3300049577 Bacteria 2035
189 Ga0501042_0009148 3300049578 Bacteria 6587
190 Ga0501043_0067106 3300049579 Bacteria 2817
191 Ga0501048_0002261 3300049582 Bacteria 14680
192 Ga0501068_0017224 3300049584 Bacteria 4176
193 Ga0501072_0003802 3300049588 Bacteria 11396
194 Ga0501074_0011324 3300049590 Bacteria 6484
195 Ga0501075_0008666 3300049591 Bacteria 7089
196 Ga0501076_0000960 3300049592 Bacteria 18844
197 Ga0501079_0003751 3300049741 Bacteria 11216
198 Ga0501044_0260265 3300049823 Bacteria 1673
199 Ga0501045_0081848 3300049824 Bacteria 2381
200 nmdc:mga00v17_130789_c1 3300050491 Bacteria 1604
201 nmdc:mga00v17_66609_c1 3300050491 Bacteria 2224
202 nmdc:mga05p37_1839_c1 3300050507 Bacteria 24733
203 Ga0500616_0001402 3300053153 Bacteria 23217
204 Ga0500616_0011363 3300053153 Bacteria 5264
205 Ga0501084_0001257 3300054114 Bacteria 19957
206 Ga0501084_0134957 3300054114 Bacteria 2078
207 Ga0530510_0009008 3300061734 Bacteria 6995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026121 Ga0207683_10159504 Ga0207683_101595042 426
2 3300049534 Ga0501318_004728 Ga0501318_004728_12_1304 430
3 3300037853 Ga0436364_0365879 Ga0436364_0365879_10488_11834 448
4 3300044658 Ga0466972_0009089 Ga0466972_0009089_3382_4746 449
5 3300044693 Ga0466961_0100285 Ga0466961_0100285_221_1585 449
6 3300044901 Ga0466960_0031482 Ga0466960_0031482_194_1558 449
7 3300048929 Ga0496126_0164808 Ga0496126_0164808_408_1781 450
8 3300025929 Ga0207664_10001096 Ga0207664_1000109610 452
9 iso_pu_bacteria 2751185734 2753070344 452
10 iso_pu_bacteria 2795385470 2795784423 452
11 iso_pu_bacteria 2816332139 2816506822 452
12 iso_pu_bacteria 2870721527 2870729844 452
13 iso_pu_bacteria 2870782633 2870789404 452
14 iso_pu_bacteria 2915358134 2915363749 452
15 3300038735 Ga0400485_12971 Ga0400485_12971_35129_36544 453
16 3300038742 Ga0400486_16210 Ga0400486_16210_33712_35127 453
17 iso_pu_bacteria 2585427649 2586059473 453
18 iso_pu_bacteria 2643221566 2643848309 453
19 iso_pu_bacteria 2728369380 2730229709 453
20 iso_pu_bacteria 2757320536 2758226147 453
21 iso_pu_bacteria 2773857758 2774380464 453
22 iso_pu_bacteria 2808606522 2809591771 453
23 iso_pu_bacteria 2852663356 2852665333 453
24 iso_pu_bacteria 2866612099 2866615728 453
25 iso_pu_bacteria 2899359706 2899362589 453
26 iso_pu_bacteria 2899370129 2899371718 453
27 iso_pu_bacteria 2908678064 2908680951 453
28 iso_pu_bacteria 2915768154 2915771779 453
29 iso_pu_bacteria 2919069694 2919072579 453
30 iso_pu_bacteria 2919395869 2919396606 453
31 iso_pu_bacteria 2946033335 2946033725 453
32 iso_pu_bacteria 2974294766 2974297139 453
33 iso_pu_bacteria 2974324384 2974326628 453
34 iso_pu_bacteria 8003314358 8003321933 453
35 iso_pu_bacteria 8004182704 8004185094 453
36 iso_pu_bacteria 8016254467 8016257582 453
37 3300006042 Ga0075368_10001780 Ga0075368_100017806 454
38 3300006042 Ga0075368_10013772 Ga0075368_100137722 454
39 iso_pu_bacteria 8001781756 8001790049 454
40 3300037853 Ga0436364_1086758 Ga0436364_1086758_148_1524 455
41 3300048903 Ga0496100_0078270 Ga0496100_0078270_652_2028 455
42 3300049572 Ga0501036_0007213 Ga0501036_0007213_5651_7018 455
43 iso_pu_bacteria 2643221567 2643850507 455
44 iso_pu_bacteria 2643221624 2644134264 455
45 iso_pu_bacteria 2643221711 2644609403 455
46 iso_pu_bacteria 2728369276 2729906029 455
47 iso_pu_bacteria 2808606365 2808873762 455
48 iso_pu_bacteria 2811994882 2812374616 455
49 iso_pu_bacteria 2818991318 2819427214 455
50 iso_pu_bacteria 2818991458 2819666238 455
51 3300005329 Ga0070683_100163099 Ga0070683_1001630991 456
52 3300005338 Ga0068868_100043179 Ga0068868_1000431793 456
53 3300005347 Ga0070668_100019250 Ga0070668_1000192504 456
54 3300005354 Ga0070675_100087906 Ga0070675_1000879063 456
55 3300005356 Ga0070674_100053383 Ga0070674_1000533832 456
56 3300005366 Ga0070659_100077117 Ga0070659_1000771172 456
57 3300005441 Ga0070700_100080556 Ga0070700_1000805562 456
58 3300005455 Ga0070663_100008881 Ga0070663_1000088816 456
59 3300005548 Ga0070665_100316263 Ga0070665_1003162631 456
60 3300005564 Ga0070664_100151789 Ga0070664_1001517892 456
61 3300005577 Ga0068857_100205896 Ga0068857_1002058962 456
62 3300005615 Ga0070702_100001753 Ga0070702_1000017536 456
63 3300005719 Ga0068861_100036403 Ga0068861_1000364032 456
64 3300005834 Ga0068851_10050164 Ga0068851_100501642 456
65 3300005843 Ga0068860_100060154 Ga0068860_1000601543 456
66 3300006028 Ga0070717_10192205 Ga0070717_101922052 456
67 3300006175 Ga0070712_100100540 Ga0070712_1001005401 456
68 3300006881 Ga0068865_100114514 Ga0068865_1001145141 456
69 3300009148 Ga0105243_10053768 Ga0105243_100537684 456
70 3300009176 Ga0105242_10052745 Ga0105242_100527454 456
71 3300009553 Ga0105249_10155513 Ga0105249_101555132 456
72 3300010375 Ga0105239_10196542 Ga0105239_101965423 456
73 3300013105 Ga0157369_10226811 Ga0157369_102268112 456
74 3300013105 Ga0157369_10296982 Ga0157369_102969821 456
75 3300013297 Ga0157378_10018928 Ga0157378_100189284 456
76 3300013306 Ga0163162_10011187 Ga0163162_100111875 456
77 3300013308 Ga0157375_10173670 Ga0157375_101736701 456
78 3300014326 Ga0157380_10154492 Ga0157380_101544921 456
79 3300017792 Ga0163161_10056664 Ga0163161_100566643 456
80 3300021358 Ga0213873_10002887 Ga0213873_100028872 456
81 3300021388 Ga0213875_10000060 Ga0213875_1000006012 456
82 3300021388 Ga0213875_10006714 Ga0213875_100067142 456
83 3300021388 Ga0213875_10007972 Ga0213875_100079722 456
84 3300025321 Ga0207656_10032369 Ga0207656_100323691 456
85 3300025901 Ga0207688_10001942 Ga0207688_1000194211 456
86 3300025907 Ga0207645_10049293 Ga0207645_100492932 456
87 3300025919 Ga0207657_10070738 Ga0207657_100707381 456
88 3300025919 Ga0207657_10165063 Ga0207657_101650632 456
89 3300025927 Ga0207687_10013201 Ga0207687_100132012 456
90 3300025931 Ga0207644_10003695 Ga0207644_100036957 456
91 3300025933 Ga0207706_10053583 Ga0207706_100535832 456
92 3300025933 Ga0207706_10071416 Ga0207706_100714162 456
93 3300025934 Ga0207686_10022871 Ga0207686_100228714 456
94 3300025938 Ga0207704_10035650 Ga0207704_100356502 456
95 3300025945 Ga0207679_10080968 Ga0207679_100809683 456
96 3300025961 Ga0207712_10031204 Ga0207712_100312044 456
97 3300025972 Ga0207668_10009923 Ga0207668_100099235 456
98 3300025981 Ga0207640_10044700 Ga0207640_100447002 456
99 3300026023 Ga0207677_10179449 Ga0207677_101794491 456
100 3300026075 Ga0207708_10013146 Ga0207708_100131464 456
101 3300026075 Ga0207708_10096027 Ga0207708_100960272 456
102 3300026088 Ga0207641_10028609 Ga0207641_100286092 456
103 3300026118 Ga0207675_100168330 Ga0207675_1001683302 456
104 3300026142 Ga0207698_10200342 Ga0207698_102003421 456
105 3300027907 Ga0207428_10102003 Ga0207428_101020032 456
106 3300028379 Ga0268266_10040454 Ga0268266_100404542 456
107 3300028379 Ga0268266_10120072 Ga0268266_101200722 456
108 3300028381 Ga0268264_10045971 Ga0268264_100459713 456
109 3300031727 Ga0316576_10003663 Ga0316576_100036635 456
110 3300031824 Ga0307413_10043990 Ga0307413_100439902 456
111 3300031852 Ga0307410_10006888 Ga0307410_100068885 456
112 3300031903 Ga0307407_10013507 Ga0307407_100135073 456
113 3300031995 Ga0307409_100115463 Ga0307409_1001154632 456
114 3300031995 Ga0307409_100145875 Ga0307409_1001458752 456
115 3300032002 Ga0307416_100055139 Ga0307416_1000551391 456
116 3300035398 Ga0316574_0002081 Ga0316574_0002081_1361_2731 456
117 3300037418 Ga0395900_0156425 Ga0395900_0156425_780_2159 456
118 3300037853 Ga0436364_0061454 Ga0436364_0061454_62157_63557 456
119 3300039437 Ga0436365_1922857 Ga0436365_1922857_4962_6347 456
120 3300039453 Ga0436362_0530562 Ga0436362_0530562_51046_52416 456
121 3300041453 Ga0451797_0806211 Ga0451797_0806211_191_1570 456
122 3300044683 Ga0466965_0004058 Ga0466965_0004058_1939_3309 456
123 3300044684 Ga0466966_0028946 Ga0466966_0028946_1627_3015 456
124 3300044735 Ga0466968_0000065 Ga0466968_0000065_16781_18166 456
125 3300044765 Ga0466970_0083780 Ga0466970_0083780_50_1432 456
126 3300044901 Ga0466960_0000244 Ga0466960_0000244_12507_13877 456
127 3300045049 Ga0466959_0047174 Ga0466959_0047174_484_1872 456
128 3300045836 Ga0466958_0000068 Ga0466958_0000068_2823_4211 456
129 3300045976 Ga0466967_0001692 Ga0466967_0001692_1050_2435 456
130 3300045976 Ga0466967_0201771 Ga0466967_0201771_475_1857 456
131 3300046463 Ga0495653_0123882 Ga0495653_0123882_104_1483 456
132 3300048904 Ga0496101_0033667 Ga0496101_0033667_1450_2835 456
133 3300048905 Ga0496102_0002825 Ga0496102_0002825_1438_2817 456
134 3300048905 Ga0496102_0003449 Ga0496102_0003449_9020_10405 456
135 3300048905 Ga0496102_0073121 Ga0496102_0073121_492_1871 456
136 3300048906 Ga0496103_0029653 Ga0496103_0029653_1799_3184 456
137 3300048907 Ga0496104_0005043 Ga0496104_0005043_6468_7853 456
138 3300048907 Ga0496104_0087337 Ga0496104_0087337_882_2261 456
139 3300048907 Ga0496104_0104077 Ga0496104_0104077_618_2003 456
140 3300048908 Ga0496105_0034185 Ga0496105_0034185_146_1531 456
141 3300048908 Ga0496105_0036372 Ga0496105_0036372_1910_3289 456
142 3300048908 Ga0496105_0037062 Ga0496105_0037062_1956_3341 456
143 3300048912 Ga0496109_0030911 Ga0496109_0030911_168_1547 456
144 3300048913 Ga0496110_0050571 Ga0496110_0050571_2056_3435 456
145 3300048913 Ga0496110_0164371 Ga0496110_0164371_424_1806 456
146 3300048914 Ga0496111_0017282 Ga0496111_0017282_371_1750 456
147 3300048914 Ga0496111_0110562 Ga0496111_0110562_443_1822 456
148 3300048916 Ga0496113_0028862 Ga0496113_0028862_828_2207 456
149 3300048917 Ga0496114_0021212 Ga0496114_0021212_1631_3010 456
150 3300048917 Ga0496114_0051835 Ga0496114_0051835_694_2073 456
151 3300048917 Ga0496114_0056691 Ga0496114_0056691_715_2094 456
152 3300048917 Ga0496114_0095286 Ga0496114_0095286_1087_2472 456
153 3300048928 Ga0496125_0000061 Ga0496125_0000061_158999_160369 456
154 3300049568 Ga0501031_0045072 Ga0501031_0045072_424_1803 456
155 3300049572 Ga0501036_0060684 Ga0501036_0060684_1233_2612 456
156 3300049574 Ga0501038_0111716 Ga0501038_0111716_758_2137 456
157 3300049575 Ga0501039_0003524 Ga0501039_0003524_9533_10912 456
158 3300049577 Ga0501041_0000727 Ga0501041_0000727_2747_4126 456
159 3300049577 Ga0501041_0078272 Ga0501041_0078272_250_1629 456
160 3300049578 Ga0501042_0009148 Ga0501042_0009148_4621_6000 456
161 3300049579 Ga0501043_0067106 Ga0501043_0067106_490_1869 456
162 3300049582 Ga0501048_0002261 Ga0501048_0002261_12402_13781 456
163 3300049584 Ga0501068_0017224 Ga0501068_0017224_2590_3969 456
164 3300049588 Ga0501072_0003802 Ga0501072_0003802_4872_6251 456
165 3300049590 Ga0501074_0011324 Ga0501074_0011324_1076_2455 456
166 3300049591 Ga0501075_0008666 Ga0501075_0008666_3247_4626 456
167 3300049592 Ga0501076_0000960 Ga0501076_0000960_16554_17933 456
168 3300049741 Ga0501079_0003751 Ga0501079_0003751_7426_8805 456
169 3300049823 Ga0501044_0260265 Ga0501044_0260265_151_1530 456
170 3300049824 Ga0501045_0081848 Ga0501045_0081848_202_1581 456
171 3300054114 Ga0501084_0001257 Ga0501084_0001257_5473_6852 456
172 3300054114 Ga0501084_0134957 Ga0501084_0134957_525_1907 456
173 3300061734 Ga0530510_0009008 Ga0530510_0009008_5275_6654 456
174 iso_pu_bacteria 2565956761 2566992959 456
175 iso_pu_bacteria 2643221721 2644666135 456
176 iso_pu_bacteria 2839986021 2839987593 456
177 iso_pu_bacteria 2935890801 2935894622 456
178 iso_pu_bacteria 8047710418 8047711720 456
179 3300005338 Ga0068868_100075786 Ga0068868_1000757862 457
180 3300005347 Ga0070668_100015529 Ga0070668_1000155292 457
181 3300005455 Ga0070663_100005454 Ga0070663_1000054544 457
182 3300005983 Ga0081540_1005397 Ga0081540_10053974 457
183 3300006051 Ga0075364_10080730 Ga0075364_100807302 457
184 3300009545 Ga0105237_10236337 Ga0105237_102363372 457
185 3300013307 Ga0157372_10032798 Ga0157372_100327983 457
186 3300025972 Ga0207668_10002823 Ga0207668_1000282310 457
187 3300026067 Ga0207678_10000897 Ga0207678_1000089721 457
188 3300028794 Ga0307515_10069424 Ga0307515_100694243 457
189 3300030522 Ga0307512_10095666 Ga0307512_100956662 457
190 3300031838 Ga0307518_10001495 Ga0307518_100014958 457
191 3300033179 Ga0307507_10009667 Ga0307507_1000966711 457
192 3300033180 Ga0307510_10062920 Ga0307510_100629202 457
193 3300044683 Ga0466965_0031001 Ga0466965_0031001_691_2064 457
194 3300044765 Ga0466970_0079593 Ga0466970_0079593_203_1576 457
195 3300048904 Ga0496101_0052393 Ga0496101_0052393_204_1577 457
196 3300048906 Ga0496103_0050080 Ga0496103_0050080_1018_2391 457
197 3300048910 Ga0496107_0021614 Ga0496107_0021614_2821_4194 457
198 3300048911 Ga0496108_0270519 Ga0496108_0270519_35_1450 457
199 3300048912 Ga0496109_0064330 Ga0496109_0064330_28_1401 457
200 3300048914 Ga0496111_0095571 Ga0496111_0095571_511_1884 457
201 3300048915 Ga0496112_0013487 Ga0496112_0013487_853_2226 457
202 3300048916 Ga0496113_0033055 Ga0496113_0033055_2362_3735 457
203 3300048917 Ga0496114_0035158 Ga0496114_0035158_2550_3923 457
204 3300048918 Ga0496115_0085507 Ga0496115_0085507_996_2369 457
205 3300048922 Ga0496119_0002245 Ga0496119_0002245_4682_6055 457
206 3300048922 Ga0496119_0039117 Ga0496119_0039117_125_1498 457
207 3300048922 Ga0496119_0061373 Ga0496119_0061373_53_1426 457
208 3300048923 Ga0496120_0002895 Ga0496120_0002895_7213_8586 457
209 3300048923 Ga0496120_0003062 Ga0496120_0003062_13340_14713 457
210 3300048925 Ga0496122_0006445 Ga0496122_0006445_5286_6659 457
211 3300048926 Ga0496123_0002583 Ga0496123_0002583_7401_8774 457
212 3300048927 Ga0496124_0002946 Ga0496124_0002946_5648_7021 457
213 3300048927 Ga0496124_0033785 Ga0496124_0033785_3093_4475 457
214 3300048928 Ga0496125_0002347 Ga0496125_0002347_11113_12486 457
215 3300050491 nmdc:mga00v17_66609_c1 nmdc:mga00v17_66609_c1_191_1573 457
216 iso_pu_bacteria 2515154202 2516083245 457
217 iso_pu_bacteria 2808606447 2809227419 457
218 iso_pu_bacteria 2852632344 2852633201 457
219 3300005530 Ga0070679_100156993 Ga0070679_1001569932 458
220 3300005985 Ga0081539_10000432 Ga0081539_1000043217 458
221 3300006931 Ga0097620_100028552 Ga0097620_1000285527 458
222 3300009147 Ga0114129_10000004 Ga0114129_1000000471 458
223 3300009147 Ga0114129_10211011 Ga0114129_102110111 458
224 3300025945 Ga0207679_10214102 Ga0207679_102141022 458
225 3300031247 Ga0265340_10001063 Ga0265340_100010639 458
226 3300031456 Ga0307513_10133374 Ga0307513_101333741 458
227 3300031727 Ga0316576_10004483 Ga0316576_100044833 458
228 3300031727 Ga0316576_10021429 Ga0316576_100214293 458
229 3300031995 Ga0307409_100022003 Ga0307409_1000220032 458
230 3300031995 Ga0307409_100255579 Ga0307409_1002555792 458
231 3300032004 Ga0307414_10096655 Ga0307414_100966552 458
232 3300035398 Ga0316574_0050582 Ga0316574_0050582_948_2411 458
233 3300035398 Ga0316574_0077198 Ga0316574_0077198_129_1505 458
234 3300035398 Ga0316574_0078710 Ga0316574_0078710_405_1781 458
235 3300036712 Ga0316584_0007915 Ga0316584_0007915_2850_4226 458
236 3300036712 Ga0316584_0075342 Ga0316584_0075342_297_1673 458
237 3300038741 Ga0400488_59008 Ga0400488_59008_6394_7770 458
238 3300041451 Ga0451791_0487210 Ga0451791_0487210_1216_2604 458
239 3300041512 Ga0451853_1612418 Ga0451853_1612418_648_2033 458
240 3300050491 nmdc:mga00v17_130789_c1 nmdc:mga00v17_130789_c1_183_1568 458
241 3300050507 nmdc:mga05p37_1839_c1 nmdc:mga05p37_1839_c1_22484_23860 458
242 3300053153 Ga0500616_0001402 Ga0500616_0001402_478_1866 458
243 3300053153 Ga0500616_0011363 Ga0500616_0011363_3420_4808 458
244 iso_pu_bacteria 2501939600 2501943906 458
245 iso_pu_bacteria 2515154137 2515755010 458
246 iso_pu_bacteria 2515154203 2516088652 458
247 iso_pu_bacteria 2855670206 2855676326 458
248 iso_pu_bacteria 2855676851 2855681465 458
249 iso_pu_bacteria 2855683550 2855687842 458
250 iso_pu_bacteria 2856858025 2856864604 458
251 iso_pu_bacteria 2857288857 2857289339 458
252 iso_pu_bacteria 2858848962 2858855269 458
253 iso_pu_bacteria 2858868258 2858868606 458
254 iso_pu_bacteria 2858882152 2858888836 458
255 iso_pu_bacteria 2858888857 2858889108 458
256 iso_pu_bacteria 2858895516 2858897316 458
257 iso_pu_bacteria 2858902515 2858905870 458
258 iso_pu_bacteria 2867302475 2867303425 458
259 iso_pu_bacteria 2867312974 2867316220 458
260 iso_pu_bacteria 2867319477 2867321084 458
261 iso_pu_bacteria 2869048445 2869049482 458
262 iso_pu_bacteria 2869061728 2869063424 458
263 iso_pu_bacteria 2869068681 2869074640 458
264 iso_pu_bacteria 2880489317 2880489578 458
265 iso_pu_bacteria 2880495981 2880496127 458
266 iso_pu_bacteria 2902582711 2902588094 458
267 iso_pu_bacteria 2929226422 2929232261 458
268 iso_pu_bacteria 2984592036 2984594403 458
269 iso_pu_bacteria 649633069 649813871 458
270 3300003203 JGI25406J46586_10000586 JGI25406J46586_100005863 459
271 3300005985 Ga0081539_10000309 Ga0081539_1000030959 459
272 3300031852 Ga0307410_10098739 Ga0307410_100987392 459
273 3300048905 Ga0496102_0032610 Ga0496102_0032610_740_2128 459
274 3300048906 Ga0496103_0020822 Ga0496103_0020822_1929_3317 459
275 3300048912 Ga0496109_0146500 Ga0496109_0146500_32_1420 459
276 3300048915 Ga0496112_0133103 Ga0496112_0133103_876_2264 459
277 iso_pu_bacteria 2622736626 2623590926 459
278 iso_pu_bacteria 8003870546 8003876828 459
279 iso_pu_bacteria 8054704163 8054708274 459
280 iso_pu_bacteria 8054727385 8054732891 459
281 iso_pu_bacteria 8054734606 8054738781 459

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

6

317

0.98

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

170

249

0.96

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

337

445

0.94

PF12831

FAD_oxidored

FAD dependent oxidoreductase

7

109

0.83

PF00890

FAD_binding_2

FAD binding domain

7

119

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f5z-assembly5.cif.gz_I crystal structure of human dihydrolipoamide dehydrogenase (e3) complexed to the e3-binding domain of human e3-binding protein 0.9486 5 458
3rnm-assembly2.cif.gz_D the crystal structure of the subunit binding of human dihydrolipoamide transacylase (e2b) bound to human dihydrolipoamide dehydrogenase (e3) 0.9484 5 458
1dxl-assembly2.cif.gz_D dihydrolipoamide dehydrogenase of glycine decarboxylase from pisum sativum 0.9476 4 456
7zyt-assembly1.cif.gz_B crystal structure of the i318t pathogenic variant of the human dihydrolipoamide dehydrogenase 0.9475 5 458
2f5z-assembly3.cif.gz_E crystal structure of human dihydrolipoamide dehydrogenase (e3) complexed to the e3-binding domain of human e3-binding protein 0.9474 5 455
ID Description Score Start End Superfamily
af_A0A1D6LYX0_29_117_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9653 148 230 3.50.50.60
2r9zB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9588 4 334 3.50.50.60
af_Q2FY51_163_282_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9521 151 269 3.50.50.60
af_P27306_158_276_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9516 155 269 3.50.50.60
1onfA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9491 5 335 3.50.50.60
ID Description Score Start End GO Terms
AF-S2Y204-F1-model_v4 FAD/NAD(P)-binding domain-containing protein 0.9791 2 140 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A399YE62-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9726 1 413 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A0F9F0M4-F1-model_v4 Dihydrolipoyl dehydrogenase (Dihydrolipoamide dehydrogenase) 0.9713 4 392 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-Q83G31-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9699 4 458 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A357R3S4-F1-model_v4 Dihydrolipoyl dehydrogenase 0.9694 5 101 GO:0004148
GO:0006090
GO:0006103
GO:0050660

Feature Viewer

pLDDT pTM Quality
93.13 0.9 High
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Predicted Structure (AlphaFold2)

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