F384542

General Info

Members Datasets Scaffolds Average Seq Length
281 252 562 139

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0095034|Ga0496108_0095034_2029_2526
Length 165
Sequence VSKAGTTPAFKSQADIEEGKVFAPKFDAVGLIPAVVTSAETGEVLMFAYMNEEALARTVETGEAHYWSRSRGGLWRKGEVSGNTQRVVEIRTDCDQDAILLKVEMTGAEASCHTGRRTCFYRAVALGSAQDAGLALRFVETERRFDPDEVYGHAGVAKGTLKTPE

Samples

Sample ID Description Type Environment
1 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
36 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
50 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
88 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
89 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
90 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
91 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
110 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
113 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
114 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
115 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
116 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
117 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
118 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
119 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
120 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
123 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
124 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
125 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
126 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
129 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
151 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
152 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
153 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
154 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
155 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
156 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
159 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
160 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
161 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
162 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
163 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
164 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
165 2738543024 Aminobacter sp. AP02 Isolate Unclassified
166 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
167 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
168 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
169 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
170 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
171 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
172 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
173 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
174 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
175 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
176 2878730984 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.1 Isolate Nodule
177 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
178 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
179 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
180 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
181 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
182 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
183 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
184 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
185 2922368715
186 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
187 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
188 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
189 2932401849 Devosia sp. 2618 Isolate Rhizosphere
190 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
191 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
192 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
193 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
194 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
195 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
196 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
197 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
198 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
199 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
200 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
201 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
202 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
203 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
204 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
205 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
206 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
207 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
208 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
209 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
210 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
211 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
212 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
213 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
214 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
215 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
216 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
217 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
218 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
219 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
220 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
221 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
222 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
223 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
224 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
225 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
226 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
227 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
228 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
229 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
230 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
231 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
232 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
233 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
234 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
235 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
236 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
237 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
238 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
239 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
240 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
241 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
242 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
243 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
244 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
245 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
246 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
247 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
248 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
249 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
250 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
251 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
252 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 66.43
Metatranscriptomes 0
Isolates 33.57

Biome Distribution

Category Percentage (%)
Aerial Root 1.07
Bulb 0
Endosphere 7.47
Nodule 27.05
Rhizoplane 5.69
Rhizosphere 48.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496108_0095034 3300048911 Bacteria 2537
2 JGI24752J21851_1029959 3300001976 Bacteria 717
3 JGI25404J52841_10011437 3300003659 Bacteria 1913
4 Ga0065715_10191434 3300005293 Bacteria 1413
5 Ga0070683_100471447 3300005329 Bacteria 1199
6 Ga0070690_100382944 3300005330 Bacteria 1029
7 Ga0068868_101787128 3300005338 Bacteria 581
8 Ga0070691_10129226 3300005341 Bacteria 1279
9 Ga0070668_100039272 3300005347 Bacteria 3620
10 Ga0070668_100844564 3300005347 Bacteria 816
11 Ga0070675_101460140 3300005354 Bacteria 631
12 Ga0070671_101161825 3300005355 Bacteria 679
13 Ga0070674_100044989 3300005356 Bacteria 3014
14 Ga0070674_100205131 3300005356 Bacteria 1525
15 Ga0070659_100347619 3300005366 Bacteria 1243
16 Ga0070710_10012865 3300005437 Bacteria 4170
17 Ga0070711_100034361 3300005439 Bacteria 3382
18 Ga0070711_100121657 3300005439 Bacteria 1931
19 Ga0070663_100186606 3300005455 Bacteria 1611
20 Ga0070663_100919718 3300005455 Bacteria 757
21 Ga0070678_100263070 3300005456 Bacteria 1452
22 Ga0070662_100132015 3300005457 Bacteria 1926
23 Ga0070672_100109727 3300005543 Bacteria 2248
24 Ga0070695_100249708 3300005545 Bacteria 1291
25 Ga0070665_101572728 3300005548 Bacteria 665
26 Ga0068852_101952060 3300005616 Bacteria 609
27 Ga0068859_102727999 3300005617 Bacteria 543
28 Ga0068861_100306580 3300005719 Bacteria 1377
29 Ga0068858_101631263 3300005842 Bacteria 637
30 Ga0068862_101115161 3300005844 Bacteria 785
31 Ga0081455_10313566 3300005937 Bacteria 1120
32 Ga0075365_10031510 3300006038 Bacteria 3401
33 Ga0075365_10623721 3300006038 Bacteria 762
34 Ga0075364_10583911 3300006051 Bacteria 764
35 Ga0075364_10832013 3300006051 Bacteria 629
36 Ga0070712_100223202 3300006175 Bacteria 1493
37 Ga0075362_10198751 3300006177 Bacteria 975
38 Ga0075366_10177733 3300006195 Bacteria 1292
39 Ga0068871_101469120 3300006358 Bacteria 644
40 Ga0075428_100364314 3300006844 Bacteria 1550
41 Ga0099825_1065890 3300006941 Bacteria 571
42 Ga0099824_1054632 3300006942 Bacteria 695
43 Ga0105245_12474090 3300009098 Bacteria 573
44 Ga0105247_10012893 3300009101 Bacteria 5015
45 Ga0105247_10627826 3300009101 Bacteria 800
46 Ga0105243_10020406 3300009148 Bacteria 5025
47 Ga0105248_11762654 3300009177 Bacteria 702
48 Ga0105237_10112408 3300009545 Bacteria 2716
49 Ga0105249_10369706 3300009553 Bacteria 1457
50 Ga0105239_11367414 3300010375 Bacteria 817
51 Ga0105239_11882151 3300010375 Bacteria 694
52 Ga0157374_11544156 3300013296 Bacteria 687
53 Ga0157378_10084013 3300013297 Bacteria 2882
54 Ga0157375_10684198 3300013308 Bacteria 1180
55 Ga0163163_11188315 3300014325 Bacteria 825
56 Ga0163161_10044150 3300017792 Bacteria 3210
57 Ga0163161_11502701 3300017792 Bacteria 591
58 Ga0213874_10119413 3300021377 Bacteria 894
59 Ga0228598_1011183 3300024227 Bacteria 1787
60 Ga0209148_1004978 3300025254 Bacteria 3131
61 Ga0209233_1004546 3300025261 Bacteria 4702
62 Ga0209233_1060168 3300025261 Bacteria 736
63 Ga0209455_1002740 3300025272 Bacteria 6614
64 Ga0209564_1001521 3300025295 Bacteria 23076
65 Ga0207692_10174255 3300025898 Bacteria 1249
66 Ga0207710_10039926 3300025900 Bacteria 2079
67 Ga0207688_10143604 3300025901 Bacteria 1406
68 Ga0207680_10039736 3300025903 Bacteria 2732
69 Ga0207671_11056100 3300025914 Bacteria 639
70 Ga0207693_10022066 3300025915 Bacteria 5062
71 Ga0207663_10367717 3300025916 Bacteria 1092
72 Ga0207659_10204797 3300025926 Bacteria 1578
73 Ga0207700_11413773 3300025928 Bacteria 618
74 Ga0207690_10133592 3300025932 Bacteria 1819
75 Ga0207706_10013800 3300025933 Bacteria 7332
76 Ga0207709_10017335 3300025935 Bacteria 4019
77 Ga0207670_11150245 3300025936 Bacteria 656
78 Ga0207669_10399303 3300025937 Bacteria 1076
79 Ga0207691_10010614 3300025940 Bacteria 8837
80 Ga0207668_10031545 3300025972 Bacteria 3491
81 Ga0207678_10016512 3300026067 Bacteria 6482
82 Ga0207675_100013076 3300026118 Bacteria 7747
83 Ga0265319_1129858 3300028563 Bacteria 783
84 Ga0265334_10107782 3300028573 Bacteria 1003
85 Ga0265336_10005218 3300028666 Bacteria 4819
86 Ga0265338_10000090 3300028800 Bacteria 171540
87 Ga0265324_10011883 3300029957 Bacteria 3305
88 Ga0307508_10064014 3300031616 Bacteria 3243
89 Ga0307508_10249571 3300031616 Bacteria 1371
90 Ga0307409_100095673 3300031995 Bacteria 2448
91 Ga0307416_100772146 3300032002 Bacteria 1055
92 Ga0307416_101333056 3300032002 Bacteria 823
93 Ga0307414_10221107 3300032004 Bacteria 1555
94 Ga0307414_10731409 3300032004 Bacteria 898
95 Ga0307415_100084719 3300032126 Bacteria 2275
96 Ga0307415_100570185 3300032126 Bacteria 1002
97 Ga0373941_0071636 3300035115 Bacteria 1152
98 Ga0395898_0350345 3300037466 Bacteria 1408
99 Ga0436364_0528630 3300037853 Bacteria 867
100 Ga0436361_0940934 3300039447 Bacteria 1263
101 Ga0439465_0399302 3300041413 Bacteria 523
102 Ga0451797_0453746 3300041453 Bacteria 752
103 Ga0451798_0102279 3300041458 Bacteria 758
104 Ga0451851_0206972 3300041507 Bacteria 1273
105 Ga0439432_087995 3300042006 Bacteria 936
106 Ga0451577_0467384 3300042876 Bacteria 1145
107 Ga0466963_1287275 3300044694 Bacteria 513
108 Ga0466970_0209734 3300044765 Bacteria 1085
109 Ga0466967_0082666 3300045976 Bacteria 2903
110 Ga0495603_0349822 3300046455 Bacteria 848
111 Ga0495638_0037909 3300046460 Bacteria 3065
112 Ga0495651_0291539 3300046462 Bacteria 1098
113 Ga0495639_0022871 3300046475 Bacteria 2745
114 Ga0495585_0115833 3300046492 Bacteria 1421
115 Ga0495585_0233561 3300046492 Bacteria 923
116 Ga0495583_0169750 3300046506 Bacteria 897
117 Ga0495610_0149352 3300046512 Bacteria 999
118 Ga0495631_0094284 3300046518 Bacteria 1288
119 Ga0495631_0164292 3300046518 Bacteria 952
120 Ga0495632_0058217 3300046519 Bacteria 1884
121 Ga0495637_0147171 3300046520 Bacteria 891
122 Ga0495643_0463521 3300046522 Bacteria 550
123 Ga0495644_0103804 3300046523 Bacteria 1076
124 Ga0495648_0235081 3300046524 Bacteria 894
125 Ga0495663_0382423 3300046525 Bacteria 516
126 Ga0495642_0418400 3300046528 Bacteria 591
127 Ga0495652_0903478 3300046529 Bacteria 582
128 Ga0495598_0022411 3300046537 Bacteria 1690
129 Ga0495609_0046139 3300046538 Bacteria 1951
130 Ga0495609_0228577 3300046538 Bacteria 771
131 Ga0495621_0153206 3300046539 Bacteria 908
132 Ga0495597_0156905 3300046542 Bacteria 931
133 Ga0495633_0269551 3300046558 Bacteria 775
134 Ga0495656_0072153 3300046615 Bacteria 1536
135 Ga0495656_0096238 3300046615 Bacteria 1362
136 Ga0495656_0115805 3300046615 Bacteria 1259
137 Ga0495668_0466929 3300046616 Bacteria 695
138 Ga0495668_0727659 3300046616 Bacteria 549
139 Ga0495611_0021712 3300046648 Bacteria 2774
140 Ga0495661_0177488 3300046665 Bacteria 1131
141 Ga0495669_0212600 3300046684 Bacteria 926
142 Ga0495670_0248777 3300046691 Bacteria 947
143 Ga0495671_0132969 3300046692 Bacteria 1213
144 Ga0495660_0188718 3300046810 Bacteria 992
145 Ga0495636_0181867 3300047318 Bacteria 954
146 Ga0495683_0104181 3300047323 Bacteria 1361
147 Ga0495675_0254346 3300047444 Bacteria 1054
148 Ga0495673_0100324 3300047469 Bacteria 1171
149 Ga0495673_0164773 3300047469 Bacteria 848
150 Ga0495615_0245493 3300048090 Bacteria 566
151 Ga0496101_0021208 3300048904 Bacteria 4461
152 Ga0496101_0191680 3300048904 Bacteria 1578
153 Ga0496102_0078626 3300048905 Bacteria 3037
154 Ga0496102_1007917 3300048905 Bacteria 753
155 Ga0496102_1563199 3300048905 Bacteria 578
156 Ga0496104_1105089 3300048907 Bacteria 696
157 Ga0496106_0091610 3300048909 Bacteria 2347
158 Ga0496106_0799014 3300048909 Bacteria 748
159 Ga0496106_0808304 3300048909 Bacteria 743
160 Ga0496112_0663815 3300048915 Bacteria 972
161 Ga0496114_0170877 3300048917 Bacteria 1894
162 Ga0496114_1039770 3300048917 Bacteria 703
163 Ga0496115_0302667 3300048918 Bacteria 1310
164 Ga0496117_0175053 3300048920 Bacteria 1241
165 Ga0496119_0372336 3300048922 Bacteria 687
166 Ga0496123_0234587 3300048926 Bacteria 915
167 Ga0496124_0306114 3300048927 Bacteria 1145
168 Ga0496125_0418676 3300048928 Bacteria 777
169 Ga0496125_0689225 3300048928 Bacteria 544
170 Ga0501037_0010487 3300049573 Bacteria 6806
171 Ga0501070_0557203 3300049586 Bacteria 917
172 Ga0501074_0718123 3300049590 Bacteria 705
173 Ga0501238_024102 3300049671 Bacteria 869
174 Ga0501080_1127926 3300049742 Bacteria 676
175 nmdc:mga0yw44_231675_c1 3300050492 Bacteria 1226
176 nmdc:mga0yw44_239836_c1 3300050492 Bacteria 1205
177 nmdc:mga06z11_639718_c1 3300050494 Bacteria 647
178 Ga0495601_0148622 3300053077 Bacteria 1529
179 Ga0500646_0273219 3300053090 Bacteria 600
180 Ga0500642_0000022 3300053130 Bacteria 135196
181 Ga0500658_0498587 3300053134 Bacteria 551
182 Ga0500568_0025544 3300053139 Bacteria 2491
183 Ga0500590_296084 3300053148 Bacteria 612
184 Ga0500620_000116 3300053155 Bacteria 15810
185 Ga0500634_0289010 3300053161 Bacteria 657
186 Ga0501084_0817104 3300054114 Bacteria 785
187 2507509892 2507262055 Bacteria 8048963
188 2508543900 2508501009 Bacteria 7784016
189 2508698168 2508501042 Bacteria 8719808
190 2509151344 2508501128 Bacteria 8613869
191 2513652934 2513237095 Bacteria 8976980
192 2513720918 2513237104 Bacteria 10034502
193 2528853014 2528768022 Bacteria 10457665
194 2739310506 2738543024 Bacteria 5603683
195 2745074622 2744054633 Bacteria 8678936
196 2793070794 2791355197 Bacteria 8420563
197 2824664868 2824661429 Bacteria 9877870
198 2844317869 2844315083 Bacteria 8138177
199 2847934654 2847930680 Bacteria 9342022
200 2869237866 2869234852 Bacteria 6654993
201 2869263658 2869256925 Bacteria 6981691
202 2871442812 2871435913 Bacteria 6880295
203 2874112009 2874109183 Bacteria 6517025
204 2874635848 2874628541 Bacteria 8630250
205 2878732731 2878730984 Bacteria 6380721
206 2879088144 2879083081 Bacteria 8587928
207 2879109161 2879099564 Bacteria 10442239
208 2885378184 2885374607 Bacteria 8927485
209 2888395076 2888388044 Bacteria 7304136
210 2903729795 2903727486 Bacteria 8281579
211 2903774315 2903768456 Bacteria 9749579
212 2906608956 2906602504 Bacteria 8295279
213 2906628411 2906626472 Bacteria 8826946
214 2922375337
215 2922388164 2922386360 Bacteria 7017218
216 2924716700 2924710171 Bacteria 6752351
217 2928027898 2928027323 Bacteria 4382488
218 2932402959 2932401849 Bacteria 4262978
219 2932792395 2932784394 Bacteria 9704911
220 2932817522 2932809354 Bacteria 9135765
221 2932819660 2932818245 Bacteria 9955613
222 2932836521 2932828146 Bacteria 9745859
223 2935611200 2935608549 Bacteria 8203142
224 2935618868 2935616580 Bacteria 9032984
225 2935647520 2935638405 Bacteria 10015038
226 2935648638 2935648319 Bacteria 8801166
227 2935657374 2935656913 Bacteria 8965014
228 2935672783 2935665750 Bacteria 9571747
229 2935676854 2935675223 Bacteria 9928132
230 2935687736 2935684952 Bacteria 9590419
231 2935695550 2935694250 Bacteria 9291695
232 2935712316 2935703347 Bacteria 10242284
233 2935714755 2935713505 Bacteria 9608509
234 2935726680 2935722832 Bacteria 9608746
235 2935739449 2935732158 Bacteria 9706831
236 2935748487 2935741537 Bacteria 9707219
237 2935755008 2935750917 Bacteria 9590372
238 2935761086 2935760218 Bacteria 9817913
239 2935807457 2935801545 Bacteria 9301974
240 2935812597 2935810662 Bacteria 9401221
241 2935820685 2935819856 Bacteria 8261050
242 2935837041 2935827899 Bacteria 10038562
243 2935839380 2935837841 Bacteria 9454360
244 2935849305 2935847175 Bacteria 8228321
245 2935857233 2935855204 Bacteria 9035059
246 2935864762 2935864058 Bacteria 9784707
247 2935876540 2935873716 Bacteria 9632195
248 2935911918 2935908558 Bacteria 8568796
249 2935920448 2935916978 Bacteria 9113783
250 2935928947 2935926038 Bacteria 8601059
251 2935938592 2935934488 Bacteria 8602579
252 2935945516 2935942939 Bacteria 8599779
253 2935954877 2935951376 Bacteria 8602333
254 2935970764 2935967501 Bacteria 8603075
255 2935989707 2935984226 Bacteria 8302647
256 2936009339 2936002035 Bacteria 9362176
257 2936011548 2936011229 Bacteria 8801034
258 2936020143 2936019824 Bacteria 8804134
259 2936028739 2936028420 Bacteria 8965941
260 2936039190 2936037263 Bacteria 9446081
261 2936046866 2936046547 Bacteria 8903709
262 2936058262 2936055302 Bacteria 8785755
263 2940559615 2940556831 Bacteria 9590747
264 2941537864 2941531003 Bacteria 7653939
265 2941540069 2941538514 Bacteria 9402094
266 2984558726 2984555340 Bacteria 4247089
267 2984566768 2984564862 Bacteria 4339992
268 2993357956 2993356040 Bacteria 4247105
269 3005597620 3005594810 Bacteria 8716512
270 3005713653 3005710791 Bacteria 7622528
271 8006929624 8006926726 Bacteria 6749210
272 8016514809 8016511872 Bacteria 9921665
273 8016632449 8016630954 Bacteria 9217207
274 8017061635 8017057580 Bacteria 10023680
275 8019558220 8019555841 Bacteria 9642137
276 8019567073 8019565922 Bacteria 9639779
277 8019581021 8019576017 Bacteria 10049540
278 8019588756 8019586578 Bacteria 10212056
279 8019602585 8019597564 Bacteria 10041141
280 8019615974 8019608314 Bacteria 10042931
281 8019688575 8019687851 Bacteria 8712826
282 Ga0496108_0095034
283 JGI24752J21851_1029959
284 JGI25404J52841_10011437
285 Ga0065715_10191434
286 Ga0070683_100471447
287 Ga0070690_100382944
288 Ga0068868_101787128
289 Ga0070691_10129226
290 Ga0070668_100039272
291 Ga0070668_100844564
292 Ga0070675_101460140
293 Ga0070671_101161825
294 Ga0070674_100044989
295 Ga0070674_100205131
296 Ga0070659_100347619
297 Ga0070710_10012865
298 Ga0070711_100034361
299 Ga0070711_100121657
300 Ga0070663_100186606
301 Ga0070663_100919718
302 Ga0070678_100263070
303 Ga0070662_100132015
304 Ga0070672_100109727
305 Ga0070695_100249708
306 Ga0070665_101572728
307 Ga0068852_101952060
308 Ga0068859_102727999
309 Ga0068861_100306580
310 Ga0068858_101631263
311 Ga0068862_101115161
312 Ga0081455_10313566
313 Ga0075365_10031510
314 Ga0075365_10623721
315 Ga0075364_10583911
316 Ga0075364_10832013
317 Ga0070712_100223202
318 Ga0075362_10198751
319 Ga0075366_10177733
320 Ga0068871_101469120
321 Ga0075428_100364314
322 Ga0099825_1065890
323 Ga0099824_1054632
324 Ga0105245_12474090
325 Ga0105247_10012893
326 Ga0105247_10627826
327 Ga0105243_10020406
328 Ga0105248_11762654
329 Ga0105237_10112408
330 Ga0105249_10369706
331 Ga0105239_11367414
332 Ga0105239_11882151
333 Ga0157374_11544156
334 Ga0157378_10084013
335 Ga0157375_10684198
336 Ga0163163_11188315
337 Ga0163161_10044150
338 Ga0163161_11502701
339 Ga0213874_10119413
340 Ga0228598_1011183
341 Ga0209148_1004978
342 Ga0209233_1004546
343 Ga0209233_1060168
344 Ga0209455_1002740
345 Ga0209564_1001521
346 Ga0207692_10174255
347 Ga0207710_10039926
348 Ga0207688_10143604
349 Ga0207680_10039736
350 Ga0207671_11056100
351 Ga0207693_10022066
352 Ga0207663_10367717
353 Ga0207659_10204797
354 Ga0207700_11413773
355 Ga0207690_10133592
356 Ga0207706_10013800
357 Ga0207709_10017335
358 Ga0207670_11150245
359 Ga0207669_10399303
360 Ga0207691_10010614
361 Ga0207668_10031545
362 Ga0207678_10016512
363 Ga0207675_100013076
364 Ga0265319_1129858
365 Ga0265334_10107782
366 Ga0265336_10005218
367 Ga0265338_10000090
368 Ga0265324_10011883
369 Ga0307508_10064014
370 Ga0307508_10249571
371 Ga0307409_100095673
372 Ga0307416_100772146
373 Ga0307416_101333056
374 Ga0307414_10221107
375 Ga0307414_10731409
376 Ga0307415_100084719
377 Ga0307415_100570185
378 Ga0373941_0071636
379 Ga0395898_0350345
380 Ga0436364_0528630
381 Ga0436361_0940934
382 Ga0439465_0399302
383 Ga0451797_0453746
384 Ga0451798_0102279
385 Ga0451851_0206972
386 Ga0439432_087995
387 Ga0451577_0467384
388 Ga0466963_1287275
389 Ga0466970_0209734
390 Ga0466967_0082666
391 Ga0495603_0349822
392 Ga0495638_0037909
393 Ga0495651_0291539
394 Ga0495639_0022871
395 Ga0495585_0115833
396 Ga0495585_0233561
397 Ga0495583_0169750
398 Ga0495610_0149352
399 Ga0495631_0094284
400 Ga0495631_0164292
401 Ga0495632_0058217
402 Ga0495637_0147171
403 Ga0495643_0463521
404 Ga0495644_0103804
405 Ga0495648_0235081
406 Ga0495663_0382423
407 Ga0495642_0418400
408 Ga0495652_0903478
409 Ga0495598_0022411
410 Ga0495609_0046139
411 Ga0495609_0228577
412 Ga0495621_0153206
413 Ga0495597_0156905
414 Ga0495633_0269551
415 Ga0495656_0072153
416 Ga0495656_0096238
417 Ga0495656_0115805
418 Ga0495668_0466929
419 Ga0495668_0727659
420 Ga0495611_0021712
421 Ga0495661_0177488
422 Ga0495669_0212600
423 Ga0495670_0248777
424 Ga0495671_0132969
425 Ga0495660_0188718
426 Ga0495636_0181867
427 Ga0495683_0104181
428 Ga0495675_0254346
429 Ga0495673_0100324
430 Ga0495673_0164773
431 Ga0495615_0245493
432 Ga0496101_0021208
433 Ga0496101_0191680
434 Ga0496102_0078626
435 Ga0496102_1007917
436 Ga0496102_1563199
437 Ga0496104_1105089
438 Ga0496106_0091610
439 Ga0496106_0799014
440 Ga0496106_0808304
441 Ga0496112_0663815
442 Ga0496114_0170877
443 Ga0496114_1039770
444 Ga0496115_0302667
445 Ga0496117_0175053
446 Ga0496119_0372336
447 Ga0496123_0234587
448 Ga0496124_0306114
449 Ga0496125_0418676
450 Ga0496125_0689225
451 Ga0501037_0010487
452 Ga0501070_0557203
453 Ga0501074_0718123
454 Ga0501238_024102
455 Ga0501080_1127926
456 nmdc:mga0yw44_231675_c1
457 nmdc:mga0yw44_239836_c1
458 nmdc:mga06z11_639718_c1
459 Ga0495601_0148622
460 Ga0500646_0273219
461 Ga0500642_0000022
462 Ga0500658_0498587
463 Ga0500568_0025544
464 Ga0500590_296084
465 Ga0500620_000116
466 Ga0500634_0289010
467 Ga0501084_0817104
468 2507509892
469 2508543900
470 2508698168
471 2509151344
472 2513652934
473 2513720918
474 2528853014
475 2739310506
476 2745074622
477 2793070794
478 2824664868
479 2844317869
480 2847934654
481 2869237866
482 2869263658
483 2871442812
484 2874112009
485 2874635848
486 2878732731
487 2879088144
488 2879109161
489 2885378184
490 2888395076
491 2903729795
492 2903774315
493 2906608956
494 2906628411
495 2922375337
496 2922388164
497 2924716700
498 2928027898
499 2932402959
500 2932792395
501 2932817522
502 2932819660
503 2932836521
504 2935611200
505 2935618868
506 2935647520
507 2935648638
508 2935657374
509 2935672783
510 2935676854
511 2935687736
512 2935695550
513 2935712316
514 2935714755
515 2935726680
516 2935739449
517 2935748487
518 2935755008
519 2935761086
520 2935807457
521 2935812597
522 2935820685
523 2935837041
524 2935839380
525 2935849305
526 2935857233
527 2935864762
528 2935876540
529 2935911918
530 2935920448
531 2935928947
532 2935938592
533 2935945516
534 2935954877
535 2935970764
536 2935989707
537 2936009339
538 2936011548
539 2936020143
540 2936028739
541 2936039190
542 2936046866
543 2936058262
544 2940559615
545 2941537864
546 2941540069
547 2984558726
548 2984566768
549 2993357956
550 3005597620
551 3005713653
552 8006929624
553 8016514809
554 8016632449
555 8017061635
556 8019558220
557 8019567073
558 8019581021
559 8019588756
560 8019602585
561 8019615974
562 8019688575

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01502

PRA-CH

Phosphoribosyl-AMP cyclohydrolase

46

121

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bgn-assembly1.cif.gz_A crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway 0.9588 24 121
6j2l-assembly1.cif.gz_B crystal structure of bi-functional enzyme 0.9433 29 120
6j2l-assembly1.cif.gz_A crystal structure of bi-functional enzyme 0.9376 29 120
6j22-assembly1.cif.gz_B crystal structure of bi-functional enzyme 0.9308 29 112
6j22-assembly1.cif.gz_A crystal structure of bi-functional enzyme 0.9296 29 120
ID Description Score Start End Superfamily
1zpsA01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.9803 31 112 3.10.20.810
af_P9WMM7_1_97_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.9605 24 112 3.10.20.810
af_C6TGF5_46_140_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.958 24 112 3.10.20.810
af_Q2FUU3_250_343_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.9295 25 107 3.10.20.810
af_A0A1D8PKY7_169_272_3.10.20.810 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphoribosyl-AMP cyclohydrolase 0.9112 24 112 3.10.20.810
ID Description Score Start End GO Terms
AF-A0A5C9D548-F1-model_v4 deleted 0.988 21 138
AF-A0A382FE17-F1-model_v4 phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) 0.986 11 104 GO:0000105
GO:0004635
AF-A0A537Z7J7-F1-model_v4 Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)] 0.9835 23 121 GO:0000105
GO:0004635
GO:0004636
GO:0005524
GO:0005737
AF-Q8YH95-F1-model_v4 Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19) 0.9826 12 138 GO:0000105
GO:0000287
GO:0004635
GO:0005737
GO:0008270
AF-A0A336JHT2-F1-model_v4 Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19) 0.9809 21 153 GO:0000105
GO:0000287
GO:0004635
GO:0005737
GO:0008270

Map