F384319

General Info

Members Datasets Scaffolds Average Seq Length
281 198 280 307

Family's Representative Sequence

Representative Sequence 3300025292|Ga0209676_1001403|Ga0209676_100140321
Length 355
Sequence MMQGGGECPDPSKIGAASAASLPDHGICLPVPLKTQAAGSARLARGRAKSDVGAMQDRLDSICAQVLRHAVSPYYETPVPRLVVATQCAPTSGVATVYEPVTCLILQGTKQVVIGDQVLRYDASSYFVASLDLPAVGRVVEASPDKPYVAAALRIDRSALADLIASMDPASIGHTPPGDLAGFAVASVTEELVEAWAGLLGLLDRPGDVAMLAPMREREILYRLLQGPLGHQLCAIAQEDSRLSRVRRAILWMHEHFDKMLPTATLAEIAGMSTASFHRHFKAATAMSPLQFQKTLRLHAARRLLAGGAEASRAAYSVGYESASQFSREYARAFGLPPSRDAERLRGAAMAVAAA

Samples

Sample ID Description Type Environment
1 2738541337 Pelomonas sp. BT06 Isolate Unclassified
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
27 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
31 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
32 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
33 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
34 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
52 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
61 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
62 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
63 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
64 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
66 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
67 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
68 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
69 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
70 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
71 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
75 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
79 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
91 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
92 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
95 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
96 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
97 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
99 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
144 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
147 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
148 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
149 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
150 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
151 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
152 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
153 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
154 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
155 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
156 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
159 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
160 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
161 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
162 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
163 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
164 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
165 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
166 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
167 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
170 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
171 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
174 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
175 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
176 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
177 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
178 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
183 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
189 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
190 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
191 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
192 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
193 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
194 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
197 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
198 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.46
Nodule 0
Rhizoplane 4.27
Rhizosphere 78.65
Stem 0
Stem Tuber 0
Unclassified 4.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1002352 3300000546 Unclassified 2298
2 JGI24736J21556_1001366 3300001904 Bacteria 4454
3 JGI24740J21852_10005368 3300001979 Bacteria 5429
4 JGI24739J22299_10018095 3300001989 Bacteria 2535
5 JGI24737J22298_10004270 3300001990 Bacteria 4991
6 JGI24743J22301_10000674 3300001991 Bacteria 4199
7 JGI24735J21928_10004568 3300002067 Bacteria 4647
8 JGI24738J21930_10009143 3300002075 Bacteria 2240
9 rootH1_10005154 3300003323 Bacteria 3458
10 Ga0055536_1002698 3300003781 Bacteria 9849
11 Ga0055534_1007988 3300003784 Bacteria 2449
12 Ga0055530_10000024 3300003791 Bacteria 135706
13 Ga0055530_10003235 3300003791 Bacteria 9510
14 Ga0055531_10000024 3300003794 Bacteria 164239
15 Ga0055531_10001982 3300003794 Bacteria 14249
16 Ga0055531_10005047 3300003794 Bacteria 7823
17 Ga0065165_1001424 3300005262 Bacteria 25970
18 Ga0070658_10380795 3300005327 Unclassified 1210
19 Ga0070683_100050923 3300005329 Bacteria 3835
20 Ga0070670_100047471 3300005331 Bacteria 3695
21 Ga0068869_100042419 3300005334 Bacteria 3261
22 Ga0070682_100044764 3300005337 Bacteria 2741
23 Ga0068868_100181184 3300005338 Bacteria 1748
24 Ga0070660_100083733 3300005339 Bacteria 2506
25 Ga0070660_100089350 3300005339 Bacteria 2427
26 Ga0070660_100223156 3300005339 Bacteria 1532
27 Ga0070661_100020855 3300005344 Bacteria 4676
28 Ga0070661_100112663 3300005344 Bacteria 2032
29 Ga0070669_100258487 3300005353 Bacteria 1389
30 Ga0070671_100068283 3300005355 Bacteria 2964
31 Ga0070674_100082077 3300005356 Bacteria 2305
32 Ga0070673_100140291 3300005364 Bacteria 2038
33 Ga0070659_100016471 3300005366 Bacteria 5549
34 Ga0070667_100009107 3300005367 Bacteria 8216
35 Ga0070709_10393124 3300005434 Bacteria 1034
36 Ga0070711_100077784 3300005439 Bacteria 2355
37 Ga0070705_100079041 3300005440 Bacteria 2014
38 Ga0070700_100161584 3300005441 Bacteria 1542
39 Ga0070663_100071339 3300005455 Bacteria 2527
40 Ga0070662_100069112 3300005457 Bacteria 2598
41 Ga0070662_100319542 3300005457 Bacteria 1266
42 Ga0070685_10053882 3300005466 Bacteria 2332
43 Ga0070706_100061424 3300005467 Bacteria 3470
44 Ga0070698_100086503 3300005471 Bacteria 3121
45 Ga0070684_100151657 3300005535 Bacteria 2100
46 Ga0068853_100056644 3300005539 Bacteria 3381
47 Ga0068853_100075486 3300005539 Bacteria 2942
48 Ga0068853_100092610 3300005539 Bacteria 2659
49 Ga0068853_100267127 3300005539 Bacteria 1574
50 Ga0070686_100147805 3300005544 Bacteria 1642
51 Ga0070696_100039985 3300005546 Bacteria 3237
52 Ga0070693_100188794 3300005547 Bacteria 1331
53 Ga0070665_100000232 3300005548 Bacteria 92207
54 Ga0070665_100001411 3300005548 Bacteria 28230
55 Ga0070665_100334678 3300005548 Bacteria 1518
56 Ga0070704_100034697 3300005549 Bacteria 3424
57 Ga0068855_100362823 3300005563 Bacteria 1594
58 Ga0068855_100462354 3300005563 Bacteria 1383
59 Ga0070664_100036332 3300005564 Bacteria 4138
60 Ga0068857_100233081 3300005577 Bacteria 1684
61 Ga0068854_100058003 3300005578 Bacteria 2793
62 Ga0068854_100128485 3300005578 Bacteria 1933
63 Ga0068854_100224406 3300005578 Bacteria 1488
64 Ga0068856_100057785 3300005614 Bacteria 3830
65 Ga0068856_100102921 3300005614 Bacteria 2849
66 Ga0068856_100117820 3300005614 Bacteria 2656
67 Ga0068856_100162977 3300005614 Bacteria 2241
68 Ga0068856_100303130 3300005614 Bacteria 1615
69 Ga0070702_100015425 3300005615 Bacteria 3901
70 Ga0068852_100105581 3300005616 Bacteria 2552
71 Ga0068852_100177199 3300005616 Bacteria 2002
72 Ga0068861_100025508 3300005719 Bacteria 4288
73 Ga0068851_10039057 3300005834 Bacteria 2383
74 Ga0068863_100001073 3300005841 Bacteria 27337
75 Ga0068863_100219260 3300005841 Bacteria 1832
76 Ga0068858_100145758 3300005842 Bacteria 2224
77 Ga0068858_100185568 3300005842 Bacteria 1964
78 Ga0068860_100157822 3300005843 Bacteria 2186
79 Ga0068862_100039835 3300005844 Bacteria 3992
80 Ga0081539_10002217 3300005985 Bacteria 28343
81 Ga0070717_10004270 3300006028 Bacteria 10300
82 Ga0075363_100129946 3300006048 Bacteria 1412
83 Ga0070712_100000250 3300006175 Bacteria 30272
84 Ga0070712_100001235 3300006175 Bacteria 15445
85 Ga0075367_10090311 3300006178 Bacteria 1863
86 Ga0097621_100078344 3300006237 Bacteria 2746
87 Ga0075370_10142176 3300006353 Bacteria 1403
88 Ga0068871_100254484 3300006358 Bacteria 1530
89 Ga0075430_100027419 3300006846 Bacteria 4839
90 Ga0075431_100031655 3300006847 Bacteria 5448
91 Ga0068865_100169241 3300006881 Bacteria 1673
92 Ga0099794_10050140 3300007265 Bacteria 2008
93 Ga0105250_10111673 3300009092 Bacteria 1119
94 Ga0105240_10001331 3300009093 Bacteria 42512
95 Ga0105240_10052482 3300009093 Bacteria 5125
96 Ga0105240_10081046 3300009093 Bacteria 3989
97 Ga0111539_10132156 3300009094 Bacteria 2923
98 Ga0105245_10118427 3300009098 Bacteria 2471
99 Ga0105247_10046202 3300009101 Bacteria 2672
100 Ga0114129_10051358 3300009147 Bacteria 5788
101 Ga0105243_10015183 3300009148 Bacteria 5828
102 Ga0105243_10091720 3300009148 Bacteria 2502
103 Ga0105241_10060703 3300009174 Bacteria 2909
104 Ga0105241_10143325 3300009174 Bacteria 1948
105 Ga0105242_10320420 3300009176 Bacteria 1421
106 Ga0105237_10013489 3300009545 Bacteria 8565
107 Ga0105237_10049966 3300009545 Bacteria 4203
108 Ga0105237_10192470 3300009545 Bacteria 2039
109 Ga0105238_10107867 3300009551 Bacteria 2765
110 Ga0105239_10000271 3300010375 Bacteria 76812
111 Ga0105239_10016728 3300010375 Bacteria 8106
112 Ga0105239_10063751 3300010375 Bacteria 4046
113 Ga0105239_10151189 3300010375 Bacteria 2591
114 Ga0105246_10012926 3300011119 Bacteria 5222
115 Ga0157373_10033204 3300013100 Bacteria 3714
116 Ga0157373_10039280 3300013100 Bacteria 3389
117 Ga0157370_10036109 3300013104 Bacteria 4798
118 Ga0157374_10007512 3300013296 Bacteria 9297
119 Ga0157374_10047006 3300013296 Bacteria 3999
120 Ga0157378_10001913 3300013297 Bacteria 18692
121 Ga0157378_10116941 3300013297 Unclassified 2452
122 Ga0157378_10212553 3300013297 Bacteria 1835
123 Ga0157378_10303907 3300013297 Bacteria 1545
124 Ga0163162_10094236 3300013306 Bacteria 3080
125 Ga0163162_10312285 3300013306 Bacteria 1704
126 Ga0163162_10422046 3300013306 Bacteria 1466
127 Ga0157372_10157105 3300013307 Bacteria 2627
128 Ga0163163_10002369 3300014325 Bacteria 15949
129 Ga0163163_10014884 3300014325 Bacteria 7166
130 Ga0157377_10048347 3300014745 Bacteria 2386
131 Ga0157377_10149262 3300014745 Bacteria 1444
132 Ga0157379_10055845 3300014968 Bacteria 3528
133 Ga0157379_10367760 3300014968 Bacteria 1318
134 Ga0163161_10052839 3300017792 Bacteria 2945
135 Ga0213872_10000700 3300021361 Bacteria 25208
136 Ga0213875_10105159 3300021388 Bacteria 1318
137 Ga0209026_1001675 3300025250 Bacteria 9318
138 Ga0209676_1000148 3300025292 Bacteria 172161
139 Ga0209676_1001298 3300025292 Bacteria 25611
140 Ga0209676_1001403 3300025292 Bacteria 23290
141 Ga0209025_1032379 3300025294 Bacteria 2446
142 Ga0209050_1000047 3300025298 Bacteria 380561
143 Ga0209050_1000173 3300025298 Bacteria 149800
144 Ga0209257_1000076 3300025304 Bacteria 324617
145 Ga0209257_1000130 3300025304 Bacteria 212188
146 Ga0209257_1000196 3300025304 Bacteria 149656
147 Ga0209257_1008139 3300025304 Bacteria 6081
148 Ga0207656_10026783 3300025321 Bacteria 2353
149 Ga0207692_10002549 3300025898 Bacteria 7003
150 Ga0207710_10038718 3300025900 Bacteria 2109
151 Ga0207647_10020000 3300025904 Bacteria 4494
152 Ga0207685_10031035 3300025905 Bacteria 1909
153 Ga0207645_10019573 3300025907 Bacteria 4436
154 Ga0207684_10134319 3300025910 Bacteria 2124
155 Ga0207654_10002086 3300025911 Bacteria 10238
156 Ga0207695_10008833 3300025913 Bacteria 12546
157 Ga0207695_10012343 3300025913 Bacteria 10264
158 Ga0207695_10030709 3300025913 Bacteria 5912
159 Ga0207695_10287540 3300025913 Bacteria 1537
160 Ga0207695_10390420 3300025913 Bacteria 1277
161 Ga0207671_10003869 3300025914 Bacteria 14633
162 Ga0207671_10006392 3300025914 Bacteria 10506
163 Ga0207671_10111608 3300025914 Bacteria 2080
164 Ga0207693_10000015 3300025915 Bacteria 147464
165 Ga0207693_10006014 3300025915 Bacteria 10058
166 Ga0207657_10017417 3300025919 Bacteria 6888
167 Ga0207649_10026784 3300025920 Bacteria 3376
168 Ga0207681_10085858 3300025923 Bacteria 2235
169 Ga0207694_10005011 3300025924 Bacteria 10244
170 Ga0207650_10049168 3300025925 Bacteria 3113
171 Ga0207687_10137152 3300025927 Bacteria 1852
172 Ga0207700_10000095 3300025928 Bacteria 54191
173 Ga0207664_10013224 3300025929 Bacteria 5915
174 Ga0207706_10022929 3300025933 Bacteria 5605
175 Ga0207706_10055394 3300025933 Bacteria 3497
176 Ga0207706_10094444 3300025933 Bacteria 2630
177 Ga0207706_10510469 3300025933 Bacteria 1037
178 Ga0207686_10146960 3300025934 Bacteria 1636
179 Ga0207709_10266398 3300025935 Bacteria 1259
180 Ga0207704_10105945 3300025938 Bacteria 1887
181 Ga0207704_10309131 3300025938 Bacteria 1214
182 Ga0207665_10006883 3300025939 Bacteria 7528
183 Ga0207691_10008701 3300025940 Bacteria 9737
184 Ga0207689_10040154 3300025942 Bacteria 3874
185 Ga0207689_10185774 3300025942 Bacteria 1714
186 Ga0207679_10205532 3300025945 Bacteria 1648
187 Ga0207667_10027405 3300025949 Bacteria 6202
188 Ga0207651_10354758 3300025960 Bacteria 1236
189 Ga0207640_10041288 3300025981 Bacteria 2933
190 Ga0207640_10218620 3300025981 Bacteria 1457
191 Ga0207640_10264756 3300025981 Bacteria 1341
192 Ga0207658_10018167 3300025986 Bacteria 4851
193 Ga0207658_10156838 3300025986 Bacteria 1861
194 Ga0207677_10177706 3300026023 Bacteria 1671
195 Ga0207677_10245971 3300026023 Bacteria 1450
196 Ga0207703_10040268 3300026035 Bacteria 3738
197 Ga0207703_10104086 3300026035 Bacteria 2411
198 Ga0207639_10079065 3300026041 Bacteria 2598
199 Ga0207639_10111877 3300026041 Bacteria 2227
200 Ga0207639_10156911 3300026041 Bacteria 1913
201 Ga0207678_10019578 3300026067 Bacteria 5949
202 Ga0207678_10072926 3300026067 Bacteria 2942
203 Ga0207708_10017387 3300026075 Bacteria 5413
204 Ga0207702_10003086 3300026078 Bacteria 15442
205 Ga0207641_10002543 3300026088 Bacteria 16783
206 Ga0207641_10159589 3300026088 Bacteria 2049
207 Ga0207641_10474351 3300026088 Bacteria 1212
208 Ga0207674_10059846 3300026116 Bacteria 3854
209 Ga0207674_10065663 3300026116 Bacteria 3656
210 Ga0207675_100061178 3300026118 Bacteria 3515
211 Ga0207683_10024414 3300026121 Bacteria 5207
212 Ga0207683_10058915 3300026121 Bacteria 3372
213 Ga0207698_10015656 3300026142 Bacteria 5087
214 Ga0209813_10034795 3300027866 Bacteria 1505
215 Ga0268266_10000425 3300028379 Bacteria 63734
216 Ga0268266_10006956 3300028379 Bacteria 10282
217 Ga0268266_10026286 3300028379 Bacteria 4953
218 Ga0268266_10370813 3300028379 Bacteria 1348
219 Ga0268264_10119391 3300028381 Bacteria 2322
220 Ga0265314_10095172 3300031711 Bacteria 1929
221 Ga0307406_10102727 3300031901 Bacteria 1951
222 Ga0307409_100147656 3300031995 Bacteria 2036
223 Ga0373931_0042498 3300035691 Bacteria 2390
224 Ga0373933_0246917 3300035724 Bacteria 1149
225 Ga0395899_0000347 3300037312 Bacteria 57058
226 Ga0395900_0000008 3300037418 Bacteria 480459
227 Ga0395898_0009065 3300037466 Bacteria 10475
228 Ga0395905_0002513 3300037471 Bacteria 20268
229 Ga0436364_0997709 3300037853 Bacteria 1464
230 Ga0395901_0000008 3300038443 Bacteria 495962
231 Ga0466966_0158580 3300044684 Bacteria 1378
232 Ga0466958_0089687 3300045836 Bacteria 1901
233 Ga0495629_0304312 3300046459 Bacteria 1091
234 Ga0495643_0043098 3300046522 Bacteria 2457
235 Ga0495645_0108923 3300046543 Bacteria 1961
236 Ga0495623_0201079 3300046679 Bacteria 1145
237 Ga0495649_0036751 3300046694 Bacteria 2690
238 Ga0495686_0000055 3300047472 Bacteria 255566
239 Ga0495686_0006355 3300047472 Bacteria 9065
240 Ga0496100_0026661 3300048903 Bacteria 3545
241 Ga0496101_0291694 3300048904 Bacteria 1276
242 Ga0496102_0110073 3300048905 Bacteria 2567
243 Ga0496104_0057592 3300048907 Bacteria 3677
244 Ga0496104_0298818 3300048907 Bacteria 1522
245 Ga0496107_0361974 3300048910 Bacteria 1079
246 Ga0496108_0002218 3300048911 Bacteria 15555
247 Ga0496109_0565932 3300048912 Bacteria 1072
248 Ga0496110_0004975 3300048913 Bacteria 10376
249 Ga0496110_0157181 3300048913 Bacteria 2060
250 Ga0496114_0100764 3300048917 Bacteria 2465
251 Ga0496115_0084158 3300048918 Bacteria 2593
252 Ga0496117_0023475 3300048920 Bacteria 4912
253 Ga0496118_0016556 3300048921 Bacteria 6760
254 Ga0496119_0011529 3300048922 Bacteria 7305
255 Ga0496121_0000061 3300048924 Bacteria 275757
256 Ga0496121_0000949 3300048924 Bacteria 52413
257 Ga0496121_0005836 3300048924 Bacteria 15606
258 Ga0496126_0002157 3300048929 Bacteria 27382
259 Ga0496126_0003704 3300048929 Bacteria 19063
260 Ga0495682_0006434 3300049460 Bacteria 4749
261 nmdc:mga03n38_28810_c1 3300050490 Bacteria 2318
262 nmdc:mga06z11_216630_c1 3300050494 Bacteria 1117
263 nmdc:mga04h51_62759_c1 3300050495 Bacteria 1277
264 nmdc:mga05p37_38891_c1 3300050507 Bacteria 5835
265 nmdc:mga0qj67_12344_c1 3300050509 Bacteria 6433
266 nmdc:mga06r32_25903_c1 3300050510 Bacteria 5461
267 nmdc:mga08y16_140653_c1 3300050511 Bacteria 2509
268 nmdc:mga0sz30_36897_c1 3300050516 Bacteria 2044
269 Ga0495601_0065306 3300053077 Bacteria 2316
270 Ga0495619_0096142 3300053085 Bacteria 2011
271 Ga0500646_0022117 3300053090 Bacteria 1699
272 Ga0500592_001941 3300053116 Bacteria 3325
273 Ga0500568_0000436 3300053139 Bacteria 31383
274 Ga0500568_0000579 3300053139 Bacteria 26786
275 Ga0500604_0000109 3300053151 Bacteria 25338
276 Ga0500616_0000483 3300053153 Bacteria 51655
277 Ga0500616_0055217 3300053153 Bacteria 2078
278 Ga0500622_0009819 3300053156 Bacteria 5284
279 Ga0500611_000606 3300053727 Bacteria 3654
280 Ga0466962_0068447 3300061719 Unclassified 1695

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009551 Ga0105238_10107867 Ga0105238_101078672 245
2 3300013307 Ga0157372_10157105 Ga0157372_101571053 268
3 3300006846 Ga0075430_100027419 Ga0075430_1000274192 275
4 3300048924 Ga0496121_0000061 Ga0496121_0000061_34406_35305 279
5 3300005337 Ga0070682_100044764 Ga0070682_1000447641 280
6 3300053156 Ga0500622_0009819 Ga0500622_0009819_3273_4181 280
7 3300005577 Ga0068857_100233081 Ga0068857_1002330812 284
8 3300048924 Ga0496121_0000949 Ga0496121_0000949_33196_34083 284
9 3300048929 Ga0496126_0002157 Ga0496126_0002157_22908_23795 284
10 iso_pu_bacteria 2738541337 2739055457 286
11 3300001904 JGI24736J21556_1001366 JGI24736J21556_10013662 287
12 3300001979 JGI24740J21852_10005368 JGI24740J21852_100053683 287
13 3300001989 JGI24739J22299_10018095 JGI24739J22299_100180954 287
14 3300001990 JGI24737J22298_10004270 JGI24737J22298_100042703 287
15 3300002067 JGI24735J21928_10004568 JGI24735J21928_100045686 287
16 3300002075 JGI24738J21930_10009143 JGI24738J21930_100091432 287
17 3300005339 Ga0070660_100083733 Ga0070660_1000837333 287
18 3300005344 Ga0070661_100020855 Ga0070661_1000208553 287
19 3300005366 Ga0070659_100016471 Ga0070659_1000164713 287
20 3300005455 Ga0070663_100071339 Ga0070663_1000713392 287
21 3300005457 Ga0070662_100069112 Ga0070662_1000691122 287
22 3300005539 Ga0068853_100092610 Ga0068853_1000926102 287
23 3300005564 Ga0070664_100036332 Ga0070664_1000363326 287
24 3300005614 Ga0068856_100057785 Ga0068856_1000577854 287
25 3300005616 Ga0068852_100105581 Ga0068852_1001055814 287
26 3300005834 Ga0068851_10039057 Ga0068851_100390572 287
27 3300009093 Ga0105240_10081046 Ga0105240_100810464 287
28 3300009174 Ga0105241_10143325 Ga0105241_101433252 287
29 3300009545 Ga0105237_10049966 Ga0105237_100499664 287
30 3300010375 Ga0105239_10151189 Ga0105239_101511892 287
31 3300013100 Ga0157373_10039280 Ga0157373_100392801 287
32 3300013104 Ga0157370_10036109 Ga0157370_100361093 287
33 3300025904 Ga0207647_10020000 Ga0207647_100200003 287
34 3300025911 Ga0207654_10002086 Ga0207654_1000208611 287
35 3300025913 Ga0207695_10012343 Ga0207695_100123433 287
36 3300025914 Ga0207671_10003869 Ga0207671_1000386910 287
37 3300025919 Ga0207657_10017417 Ga0207657_100174174 287
38 3300025920 Ga0207649_10026784 Ga0207649_100267842 287
39 3300025924 Ga0207694_10005011 Ga0207694_100050113 287
40 3300025933 Ga0207706_10094444 Ga0207706_100944442 287
41 3300025945 Ga0207679_10205532 Ga0207679_102055321 287
42 3300025949 Ga0207667_10027405 Ga0207667_100274055 287
43 3300025981 Ga0207640_10041288 Ga0207640_100412882 287
44 3300026041 Ga0207639_10079065 Ga0207639_100790652 287
45 3300026067 Ga0207678_10072926 Ga0207678_100729262 287
46 3300026078 Ga0207702_10003086 Ga0207702_1000308610 287
47 3300026116 Ga0207674_10065663 Ga0207674_100656632 287
48 3300026142 Ga0207698_10015656 Ga0207698_100156564 287
49 3300003323 rootH1_10005154 rootH1_100051543 289
50 3300003794 Ga0055531_10000024 Ga0055531_10000024137 289
51 3300003791 Ga0055530_10003235 Ga0055530_100032359 290
52 3300003794 Ga0055531_10001982 Ga0055531_1000198213 290
53 3300005262 Ga0065165_1001424 Ga0065165_100142419 290
54 3300025250 Ga0209026_1001675 Ga0209026_10016757 290
55 3300025298 Ga0209050_1000173 Ga0209050_100017327 290
56 3300025304 Ga0209257_1000196 Ga0209257_100019627 290
57 3300025913 Ga0207695_10390420 Ga0207695_103904201 290
58 3300005548 Ga0070665_100000232 Ga0070665_10000023247 291
59 3300028379 Ga0268266_10000425 Ga0268266_1000042527 291
60 3300009093 Ga0105240_10001331 Ga0105240_1000133148 292
61 3300009093 Ga0105240_10052482 Ga0105240_100524825 292
62 3300010375 Ga0105239_10000271 Ga0105239_100002712 292
63 3300025981 Ga0207640_10218620 Ga0207640_102186202 292
64 3300047472 Ga0495686_0000055 Ga0495686_0000055_29224_30108 292
65 3300048924 Ga0496121_0005836 Ga0496121_0005836_8659_9546 292
66 3300053116 Ga0500592_001941 Ga0500592_001941_1964_2851 292
67 3300053727 Ga0500611_000606 Ga0500611_000606_1155_2042 292
68 3300005843 Ga0068860_100157822 Ga0068860_1001578222 293
69 3300028381 Ga0268264_10119391 Ga0268264_101193913 293
70 3300031995 Ga0307409_100147656 Ga0307409_1001476562 293
71 3300047472 Ga0495686_0006355 Ga0495686_0006355_436_1332 293
72 3300053090 Ga0500646_0022117 Ga0500646_0022117_563_1459 293
73 3300053139 Ga0500568_0000436 Ga0500568_0000436_3809_4711 293
74 3300053151 Ga0500604_0000109 Ga0500604_0000109_9734_10630 293
75 3300053153 Ga0500616_0055217 Ga0500616_0055217_200_1096 293
76 3300037312 Ga0395899_0000347 Ga0395899_0000347_17491_18396 295
77 3300037418 Ga0395900_0000008 Ga0395900_0000008_114053_114958 295
78 3300037466 Ga0395898_0009065 Ga0395898_0009065_5054_5959 295
79 3300037471 Ga0395905_0002513 Ga0395905_0002513_7791_8696 295
80 3300038443 Ga0395901_0000008 Ga0395901_0000008_365508_366413 295
81 3300003781 Ga0055536_1002698 Ga0055536_10026986 296
82 3300005331 Ga0070670_100047471 Ga0070670_1000474713 296
83 3300005355 Ga0070671_100068283 Ga0070671_1000682834 296
84 3300005367 Ga0070667_100009107 Ga0070667_1000091077 296
85 3300005544 Ga0070686_100147805 Ga0070686_1001478052 296
86 3300005548 Ga0070665_100001411 Ga0070665_10000141122 296
87 3300005841 Ga0068863_100001073 Ga0068863_1000010737 296
88 3300006048 Ga0075363_100129946 Ga0075363_1001299462 296
89 3300006178 Ga0075367_10090311 Ga0075367_100903112 296
90 3300006353 Ga0075370_10142176 Ga0075370_101421762 296
91 3300014325 Ga0163163_10002369 Ga0163163_100023695 296
92 3300025292 Ga0209676_1001298 Ga0209676_100129825 296
93 3300025294 Ga0209025_1032379 Ga0209025_10323793 296
94 3300025304 Ga0209257_1008139 Ga0209257_10081399 296
95 3300025925 Ga0207650_10049168 Ga0207650_100491683 296
96 3300025986 Ga0207658_10018167 Ga0207658_100181673 296
97 3300026088 Ga0207641_10002543 Ga0207641_100025436 296
98 3300027866 Ga0209813_10034795 Ga0209813_100347951 296
99 3300028379 Ga0268266_10006956 Ga0268266_100069565 296
100 3300046522 Ga0495643_0043098 Ga0495643_0043098_255_1160 296
101 3300048904 Ga0496101_0291694 Ga0496101_0291694_330_1238 296
102 3300048913 Ga0496110_0004975 Ga0496110_0004975_1663_2571 296
103 3300050490 nmdc:mga03n38_28810_c1 nmdc:mga03n38_28810_c1_298_1206 296
104 3300050494 nmdc:mga06z11_216630_c1 nmdc:mga06z11_216630_c1_80_988 296
105 3300050495 nmdc:mga04h51_62759_c1 nmdc:mga04h51_62759_c1_275_1183 296
106 3300050516 nmdc:mga0sz30_36897_c1 nmdc:mga0sz30_36897_c1_862_1770 296
107 3300006847 Ga0075431_100031655 Ga0075431_1000316552 297
108 3300009147 Ga0114129_10051358 Ga0114129_100513586 297
109 3300050507 nmdc:mga05p37_38891_c1 nmdc:mga05p37_38891_c1_4551_5462 297
110 3300050509 nmdc:mga0qj67_12344_c1 nmdc:mga0qj67_12344_c1_606_1517 297
111 3300050510 nmdc:mga06r32_25903_c1 nmdc:mga06r32_25903_c1_594_1505 297
112 3300005457 Ga0070662_100319542 Ga0070662_1003195421 298
113 3300005719 Ga0068861_100025508 Ga0068861_1000255085 298
114 3300009094 Ga0111539_10132156 Ga0111539_101321562 298
115 3300009176 Ga0105242_10320420 Ga0105242_103204201 298
116 3300013306 Ga0163162_10094236 Ga0163162_100942361 298
117 3300025933 Ga0207706_10510469 Ga0207706_105104691 298
118 3300026118 Ga0207675_100061178 Ga0207675_1000611783 298
119 3300050511 nmdc:mga08y16_140653_c1 nmdc:mga08y16_140653_c1_1452_2369 298
120 3300001991 JGI24743J22301_10000674 JGI24743J22301_100006742 303
121 3300005334 Ga0068869_100042419 Ga0068869_1000424192 303
122 3300005338 Ga0068868_100181184 Ga0068868_1001811842 303
123 3300005339 Ga0070660_100223156 Ga0070660_1002231562 303
124 3300005353 Ga0070669_100258487 Ga0070669_1002584871 303
125 3300005356 Ga0070674_100082077 Ga0070674_1000820771 303
126 3300005434 Ga0070709_10393124 Ga0070709_103931241 303
127 3300005439 Ga0070711_100077784 Ga0070711_1000777842 303
128 3300005440 Ga0070705_100079041 Ga0070705_1000790413 303
129 3300005441 Ga0070700_100161584 Ga0070700_1001615841 303
130 3300005466 Ga0070685_10053882 Ga0070685_100538822 303
131 3300005539 Ga0068853_100267127 Ga0068853_1002671271 303
132 3300005546 Ga0070696_100039985 Ga0070696_1000399852 303
133 3300005547 Ga0070693_100188794 Ga0070693_1001887941 303
134 3300005549 Ga0070704_100034697 Ga0070704_1000346973 303
135 3300005578 Ga0068854_100128485 Ga0068854_1001284853 303
136 3300005614 Ga0068856_100162977 Ga0068856_1001629772 303
137 3300005615 Ga0070702_100015425 Ga0070702_1000154253 303
138 3300005841 Ga0068863_100219260 Ga0068863_1002192602 303
139 3300005842 Ga0068858_100185568 Ga0068858_1001855682 303
140 3300005844 Ga0068862_100039835 Ga0068862_1000398355 303
141 3300006175 Ga0070712_100001235 Ga0070712_1000012355 303
142 3300006237 Ga0097621_100078344 Ga0097621_1000783444 303
143 3300009098 Ga0105245_10118427 Ga0105245_101184272 303
144 3300009148 Ga0105243_10091720 Ga0105243_100917202 303
145 3300013296 Ga0157374_10007512 Ga0157374_100075125 303
146 3300013297 Ga0157378_10212553 Ga0157378_102125532 303
147 3300014745 Ga0157377_10048347 Ga0157377_100483471 303
148 3300014968 Ga0157379_10367760 Ga0157379_103677601 303
149 3300017792 Ga0163161_10052839 Ga0163161_100528391 303
150 3300025900 Ga0207710_10038718 Ga0207710_100387182 303
151 3300025905 Ga0207685_10031035 Ga0207685_100310353 303
152 3300025915 Ga0207693_10006014 Ga0207693_100060144 303
153 3300025923 Ga0207681_10085858 Ga0207681_100858581 303
154 3300025927 Ga0207687_10137152 Ga0207687_101371522 303
155 3300025933 Ga0207706_10055394 Ga0207706_100553944 303
156 3300025934 Ga0207686_10146960 Ga0207686_101469602 303
157 3300025935 Ga0207709_10266398 Ga0207709_102663981 303
158 3300025938 Ga0207704_10105945 Ga0207704_101059452 303
159 3300025939 Ga0207665_10006883 Ga0207665_100068832 303
160 3300025942 Ga0207689_10040154 Ga0207689_100401543 303
161 3300026023 Ga0207677_10245971 Ga0207677_102459712 303
162 3300026035 Ga0207703_10040268 Ga0207703_100402682 303
163 3300026067 Ga0207678_10019578 Ga0207678_100195783 303
164 3300026075 Ga0207708_10017387 Ga0207708_100173872 303
165 3300026088 Ga0207641_10159589 Ga0207641_101595892 303
166 3300026121 Ga0207683_10058915 Ga0207683_100589152 303
167 3300028379 Ga0268266_10026286 Ga0268266_100262863 303
168 3300035691 Ga0373931_0042498 Ga0373931_0042498_290_1219 303
169 3300048905 Ga0496102_0110073 Ga0496102_0110073_433_1362 303
170 3300048907 Ga0496104_0298818 Ga0496104_0298818_181_1110 303
171 3300048910 Ga0496107_0361974 Ga0496107_0361974_22_951 303
172 3300048911 Ga0496108_0002218 Ga0496108_0002218_6171_7100 303
173 3300048913 Ga0496110_0157181 Ga0496110_0157181_985_1914 303
174 3300048917 Ga0496114_0100764 Ga0496114_0100764_44_973 303
175 3300009545 Ga0105237_10013489 Ga0105237_100134897 304
176 3300025913 Ga0207695_10008833 Ga0207695_1000883314 304
177 3300025914 Ga0207671_10006392 Ga0207671_100063927 304
178 3300048920 Ga0496117_0023475 Ga0496117_0023475_277_1248 304
179 3300048921 Ga0496118_0016556 Ga0496118_0016556_4709_5680 304
180 3300048922 Ga0496119_0011529 Ga0496119_0011529_1697_2623 304
181 3300045836 Ga0466958_0089687 Ga0466958_0089687_155_1084 305
182 3300053139 Ga0500568_0000579 Ga0500568_0000579_8787_9842 305
183 3300053153 Ga0500616_0000483 Ga0500616_0000483_37255_38310 305
184 3300003784 Ga0055534_1007988 Ga0055534_10079885 308
185 3300003791 Ga0055530_10000024 Ga0055530_1000002435 308
186 3300003794 Ga0055531_10005047 Ga0055531_100050478 308
187 3300005471 Ga0070698_100086503 Ga0070698_1000865031 308
188 3300014968 Ga0157379_10055845 Ga0157379_100558451 308
189 3300025292 Ga0209676_1000148 Ga0209676_100014835 308
190 3300025292 Ga0209676_1001403 Ga0209676_100140321 308
191 3300025298 Ga0209050_1000047 Ga0209050_1000047152 308
192 3300025304 Ga0209257_1000076 Ga0209257_1000076108 308
193 3300025304 Ga0209257_1000130 Ga0209257_1000130167 308
194 3300031711 Ga0265314_10095172 Ga0265314_100951721 308
195 3300031901 Ga0307406_10102727 Ga0307406_101027272 308
196 3300048929 Ga0496126_0003704 Ga0496126_0003704_10851_11804 308
197 3300000546 LJNas_1002352 LJNas_10023521 310
198 3300005327 Ga0070658_10380795 Ga0070658_103807952 310
199 3300005329 Ga0070683_100050923 Ga0070683_1000509232 310
200 3300005339 Ga0070660_100089350 Ga0070660_1000893502 310
201 3300005344 Ga0070661_100112663 Ga0070661_1001126631 310
202 3300005364 Ga0070673_100140291 Ga0070673_1001402912 310
203 3300005467 Ga0070706_100061424 Ga0070706_1000614243 310
204 3300005535 Ga0070684_100151657 Ga0070684_1001516572 310
205 3300005539 Ga0068853_100056644 Ga0068853_1000566441 310
206 3300005539 Ga0068853_100075486 Ga0068853_1000754862 310
207 3300005548 Ga0070665_100334678 Ga0070665_1003346782 310
208 3300005563 Ga0068855_100362823 Ga0068855_1003628231 310
209 3300005563 Ga0068855_100462354 Ga0068855_1004623542 310
210 3300005578 Ga0068854_100058003 Ga0068854_1000580033 310
211 3300005578 Ga0068854_100224406 Ga0068854_1002244062 310
212 3300005614 Ga0068856_100102921 Ga0068856_1001029213 310
213 3300005614 Ga0068856_100117820 Ga0068856_1001178201 310
214 3300005614 Ga0068856_100303130 Ga0068856_1003031302 310
215 3300005616 Ga0068852_100177199 Ga0068852_1001771992 310
216 3300005842 Ga0068858_100145758 Ga0068858_1001457582 310
217 3300005985 Ga0081539_10002217 Ga0081539_1000221720 310
218 3300006028 Ga0070717_10004270 Ga0070717_100042702 310
219 3300006175 Ga0070712_100000250 Ga0070712_10000025016 310
220 3300006358 Ga0068871_100254484 Ga0068871_1002544842 310
221 3300006881 Ga0068865_100169241 Ga0068865_1001692411 310
222 3300007265 Ga0099794_10050140 Ga0099794_100501402 310
223 3300009092 Ga0105250_10111673 Ga0105250_101116731 310
224 3300009101 Ga0105247_10046202 Ga0105247_100462021 310
225 3300009148 Ga0105243_10015183 Ga0105243_100151833 310
226 3300009174 Ga0105241_10060703 Ga0105241_100607033 310
227 3300009545 Ga0105237_10192470 Ga0105237_101924701 310
228 3300010375 Ga0105239_10016728 Ga0105239_100167289 310
229 3300010375 Ga0105239_10063751 Ga0105239_100637512 310
230 3300011119 Ga0105246_10012926 Ga0105246_100129264 310
231 3300013100 Ga0157373_10033204 Ga0157373_100332044 310
232 3300013296 Ga0157374_10047006 Ga0157374_100470064 310
233 3300013297 Ga0157378_10001913 Ga0157378_100019139 310
234 3300013297 Ga0157378_10116941 Ga0157378_101169413 310
235 3300013297 Ga0157378_10303907 Ga0157378_103039071 310
236 3300013306 Ga0163162_10312285 Ga0163162_103122852 310
237 3300013306 Ga0163162_10422046 Ga0163162_104220461 310
238 3300014325 Ga0163163_10014884 Ga0163163_100148843 310
239 3300014745 Ga0157377_10149262 Ga0157377_101492622 310
240 3300021361 Ga0213872_10000700 Ga0213872_1000070010 310
241 3300021388 Ga0213875_10105159 Ga0213875_101051591 310
242 3300025321 Ga0207656_10026783 Ga0207656_100267832 310
243 3300025898 Ga0207692_10002549 Ga0207692_100025497 310
244 3300025907 Ga0207645_10019573 Ga0207645_100195734 310
245 3300025910 Ga0207684_10134319 Ga0207684_101343192 310
246 3300025913 Ga0207695_10030709 Ga0207695_100307097 310
247 3300025913 Ga0207695_10287540 Ga0207695_102875401 310
248 3300025914 Ga0207671_10111608 Ga0207671_101116081 310
249 3300025915 Ga0207693_10000015 Ga0207693_10000015113 310
250 3300025928 Ga0207700_10000095 Ga0207700_100000959 310
251 3300025929 Ga0207664_10013224 Ga0207664_100132247 310
252 3300025933 Ga0207706_10022929 Ga0207706_100229291 310
253 3300025938 Ga0207704_10309131 Ga0207704_103091311 310
254 3300025940 Ga0207691_10008701 Ga0207691_100087019 310
255 3300025942 Ga0207689_10185774 Ga0207689_101857741 310
256 3300025960 Ga0207651_10354758 Ga0207651_103547581 310
257 3300025981 Ga0207640_10264756 Ga0207640_102647561 310
258 3300025986 Ga0207658_10156838 Ga0207658_101568382 310
259 3300026023 Ga0207677_10177706 Ga0207677_101777062 310
260 3300026035 Ga0207703_10104086 Ga0207703_101040861 310
261 3300026041 Ga0207639_10111877 Ga0207639_101118772 310
262 3300026041 Ga0207639_10156911 Ga0207639_101569112 310
263 3300026088 Ga0207641_10474351 Ga0207641_104743511 310
264 3300026116 Ga0207674_10059846 Ga0207674_100598462 310
265 3300026121 Ga0207683_10024414 Ga0207683_100244141 310
266 3300028379 Ga0268266_10370813 Ga0268266_103708131 310
267 3300035724 Ga0373933_0246917 Ga0373933_0246917_64_1014 310
268 3300037853 Ga0436364_0997709 Ga0436364_0997709_495_1439 310
269 3300044684 Ga0466966_0158580 Ga0466966_0158580_222_1172 310
270 3300046459 Ga0495629_0304312 Ga0495629_0304312_122_1072 310
271 3300046543 Ga0495645_0108923 Ga0495645_0108923_271_1221 310
272 3300046679 Ga0495623_0201079 Ga0495623_0201079_50_1000 310
273 3300046694 Ga0495649_0036751 Ga0495649_0036751_713_1666 310
274 3300048903 Ga0496100_0026661 Ga0496100_0026661_458_1408 310
275 3300048907 Ga0496104_0057592 Ga0496104_0057592_597_1553 310
276 3300048912 Ga0496109_0565932 Ga0496109_0565932_113_1060 310
277 3300048918 Ga0496115_0084158 Ga0496115_0084158_62_1018 310
278 3300049460 Ga0495682_0006434 Ga0495682_0006434_1806_2759 310
279 3300053077 Ga0495601_0065306 Ga0495601_0065306_320_1270 310
280 3300053085 Ga0495619_0096142 Ga0495619_0096142_16_966 310
281 3300061719 Ga0466962_0068447 Ga0466962_0068447_413_1363 310

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

266

344

0.96

PF06719

AraC_N

AraC-type transcriptional regulator N-terminus

78

232

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fe7-assembly1.cif.gz_A-2 structure of xylose-binding transcription activator xylr 0.931 200 301
2k9s-assembly1.cif.gz_A solution structure of dna binding domain of e. coli arac 0.9021 201 301
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.8988 200 303
7r3w-assembly3.cif.gz_C crystal structure of the albicidin resistance protein stm3175 from salmonella typhimurium 0.8667 198 300
3mkl-assembly2.cif.gz_B crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.8605 201 304
ID Description Score Start End Superfamily
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9279 200 252 1.10.10.60
af_Q59SD2_79_141_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9171 198 252 1.10.10.60
3lsgB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9166 255 297 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9114 250 303 1.10.10.60
2k9sA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9021 201 301 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7C5J4X0-F1-model_v4 Helix-turn-helix domain-containing protein 0.965 21 297 GO:0003700
GO:0043565
AF-A0A1D7TI99-F1-model_v4 AraC family transcriptional regulator 0.9619 16 296 GO:0003700
GO:0043565
AF-A0A2G2J664-F1-model_v4 AraC family transcriptional regulator 0.9574 17 301 GO:0003700
GO:0043565
AF-A0A656K2C5-F1-model_v4 AraC family transcriptional regulator 0.9562 194 305 GO:0003700
GO:0043565
AF-A0A7Y7XBL6-F1-model_v4 AraC family transcriptional regulator 0.9536 12 304 GO:0003700
GO:0043565

Feature Viewer

pLDDT pTM Quality
91.02 0.87 High
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Predicted Structure (AlphaFold2)

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