F384291

General Info

Members Datasets Scaffolds Average Seq Length
281 232 160 368

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10122740|Ga0157369_101227402
Length 391
Sequence MPPLNSITPKAAWKDIPVTSLFEPVKFGDIELKNRVVMAPLTRNRSPKAIPNDLNIAYYEQRASAGLIITEGTPVSQQGQGYADVPGLYLAPAIDGWKKVTEAVHKKGGKIVTQIWHVGRVSHTSLQPNEGAPVAPSALGAKGKTYIINPDGSGAFADTSEPRALELSEIPGVVADFAAGAKAAIEAGFDGVEIHGANGYLIDQFLKTGANLREDEYGGSVENRARFALEVVDAVAAAIGSGRVGIRLSPVTPANNITEDAPQTVFDYLVKELATRNLSFIHVIEGATGGDRGYVQGGKPFDYQELKDTYRNAGGTGAWVVNNGYEKDTAEKAVASGYADGVAFGKLFIANPDLVERFKTNAPLNEPDKNTFYGGGAKGYTDYPSLESAEA

Samples

Sample ID Description Type Environment
1 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
2 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
3 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
4 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
5 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
6 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
7 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
8 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
9 2547132374 Acidovorax radicis N35 Isolate Unclassified
10 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
11 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
12 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
13 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
14 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
15 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
16 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
17 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
18 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
19 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
20 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
21 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
22 2643221558 Rhizobium sp. Root149 Isolate Unclassified
23 2643221568 Rhizobium sp. Root564 Isolate Unclassified
24 2643221582 Rhizobium sp. Root651 Isolate Unclassified
25 2643221607 Rhizobium sp. Root73 Isolate Unclassified
26 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
27 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
28 2643221693 Rhizobium sp. Root491 Isolate Unclassified
29 2643221717 Acidovorax sp. Root267 Isolate Unclassified
30 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
31 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
32 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
33 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
34 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
35 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
36 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
37 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
38 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
39 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
40 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
41 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
42 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
43 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
44 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
45 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
46 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
47 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
48 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
49 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
50 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
51 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
52 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
53 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
54 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
55 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
56 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
57 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
58 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
59 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
60 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
61 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
62 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
63 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
64 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
65 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
66 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
67 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
68 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
69 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
70 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
71 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
72 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
73 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
74 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
75 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
76 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
77 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
78 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
79 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
80 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
81 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
82 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
83 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
84 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
85 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
86 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
87 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
88 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
89 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
90 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
91 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
92 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
93 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
94 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
95 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
96 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
97 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
98 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
99 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
100 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
101 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
102 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
103 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
104 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
105 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
106 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
107 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
108 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
109 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
110 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
111 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
112 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
113 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
114 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
115 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
116 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
117 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
118 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
119 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
120 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
121 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
122 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
123 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
124 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
125 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
126 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
127 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
128 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
129 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
130 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
131 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
132 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
133 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
134 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
135 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
136 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
137 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
138 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
139 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
140 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
141 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
142 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
143 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
144 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
145 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
146 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
147 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
148 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
149 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
150 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
151 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
152 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
153 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
154 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
159 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
160 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
161 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
162 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
163 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
165 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
166 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
167 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
168 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
169 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
170 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
171 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
172 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
173 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
174 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
175 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
176 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
177 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
178 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
179 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
180 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
181 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
182 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
183 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
184 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
185 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
186 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
187 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
188 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
189 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
190 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
191 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
192 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
193 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
194 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
198 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
199 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
200 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
201 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
202 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
203 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
204 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
205 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
206 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
209 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
211 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
212 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
213 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
214 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
215 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
216 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
217 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
218 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
219 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
220 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
221 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
222 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
223 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
224 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
225 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
226 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
227 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
228 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
229 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
230 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
231 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
232 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 56.58
Metatranscriptomes 0.36
Isolates 43.06

Biome Distribution

Category Percentage (%)
Aerial Root 1.78
Bulb 0
Endosphere 13.52
Nodule 25.62
Rhizoplane 2.85
Rhizosphere 29.89
Stem 0
Stem Tuber 0
Unclassified 26.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10017305 3300003187 Bacteria 3130
2 rootH1_10073995 3300003323 Bacteria 3565
3 rootH1_10073997 3300003323 Bacteria 4306
4 Ga0055529_1001395 3300003763 Bacteria 7678
5 Ga0055536_1002954 3300003781 Bacteria 9325
6 Ga0055540_1002924 3300003792 Bacteria 8625
7 Ga0055531_10001447 3300003794 Bacteria 17522
8 Ga0058692_1002151 3300003856 Bacteria 6767
9 Ga0070658_10054501 3300005327 Bacteria 3247
10 Ga0070660_100016101 3300005339 Bacteria 5420
11 Ga0070687_100008024 3300005343 Bacteria 4445
12 Ga0070668_100069988 3300005347 Bacteria 2731
13 Ga0070669_100120333 3300005353 Bacteria 2002
14 Ga0070673_100003710 3300005364 Bacteria 9567
15 Ga0070665_100004767 3300005548 Bacteria 14123
16 Ga0068854_100007801 3300005578 Bacteria 6847
17 Ga0075368_10003839 3300006042 Bacteria 5053
18 Ga0075364_10000790 3300006051 Bacteria 16669
19 Ga0079104_1000045 3300006946 Bacteria 183705
20 Ga0099826_10000476 3300006948 Bacteria 19369
21 Ga0099826_10007518 3300006948 Bacteria 8044
22 Ga0099795_10059432 3300007788 Unclassified 1414
23 Ga0105238_10089582 3300009551 Bacteria 3064
24 Ga0157373_10001470 3300013100 Bacteria 17977
25 Ga0157371_10000017 3300013102 Bacteria 320830
26 Ga0157371_10002714 3300013102 Bacteria 16710
27 Ga0157370_10000453 3300013104 Bacteria 51332
28 Ga0157369_10122740 3300013105 Bacteria 2755
29 Ga0214542_1028192 3300021321 Bacteria 2463
30 Ga0214543_1009579 3300021327 Bacteria 14952
31 Ga0213872_10008682 3300021361 Bacteria 4908
32 Ga0228711_1004633 3300022739 Bacteria 21084
33 Ga0228710_1000006 3300022740 Bacteria 209134
34 Ga0209672_102787 3300025228 Bacteria 4002
35 Ga0209258_103845 3300025242 Bacteria 3058
36 Ga0209759_1001151 3300025256 Bacteria 16810
37 Ga0209759_1006328 3300025256 Bacteria 3998
38 Ga0209455_1000522 3300025272 Bacteria 27236
39 Ga0209673_1007335 3300025273 Bacteria 5109
40 Ga0209676_1010766 3300025292 Bacteria 3767
41 Ga0209025_1000171 3300025294 Bacteria 160478
42 Ga0209025_1000213 3300025294 Bacteria 139002
43 Ga0209758_1001364 3300025297 Bacteria 29208
44 Ga0209051_1000645 3300025303 Bacteria 39647
45 Ga0209257_1002946 3300025304 Bacteria 15621
46 Ga0207662_10007924 3300025918 Bacteria 5786
47 Ga0207657_10043363 3300025919 Bacteria 3963
48 Ga0207681_10089654 3300025923 Bacteria 2193
49 Ga0207668_10029347 3300025972 Bacteria 3605
50 Ga0207640_10005767 3300025981 Bacteria 6751
51 Ga0209281_1000034 3300027111 Bacteria 382562
52 Ga0209281_1000508 3300027111 Bacteria 51432
53 Ga0209371_1000022 3300027312 Bacteria 536342
54 Ga0209371_1000173 3300027312 Bacteria 96201
55 Ga0209371_1000709 3300027312 Bacteria 28175
56 Ga0209282_1000116 3300027666 Bacteria 51432
57 Ga0209282_1002318 3300027666 Bacteria 10920
58 Ga0209974_10001299 3300027876 Bacteria 8989
59 Ga0268266_10191403 3300028379 Bacteria 1868
60 Ga0307515_10000017 3300028794 Bacteria 550465
61 Ga0268256_1000019 3300030500 Bacteria 587949
62 Ga0268256_1007878 3300030500 Bacteria 3730
63 Ga0265330_10000037 3300031235 Bacteria 120957
64 Ga0265332_10000008 3300031238 Bacteria 301609
65 Ga0265325_10007670 3300031241 Bacteria 6445
66 Ga0265340_10014498 3300031247 Bacteria 4115
67 Ga0307513_10002030 3300031456 Bacteria 28510
68 Ga0307408_100000128 3300031548 Bacteria 84297
69 Ga0265314_10000065 3300031711 Bacteria 158383
70 Ga0307406_10000073 3300031901 Bacteria 55371
71 Ga0315914_1000008 3300031967 Bacteria 209133
72 Ga0315913_1002685 3300033430 Bacteria 21084
73 Ga0315915_1000058 3300033464 Bacteria 72461
74 Ga0395900_0000021 3300037418 Bacteria 351144
75 Ga0395900_0128096 3300037418 Bacteria 2602
76 Ga0395898_0002409 3300037466 Bacteria 22197
77 Ga0395898_0026706 3300037466 Bacteria 5804
78 Ga0395905_0000912 3300037471 Bacteria 38176
79 Ga0395901_0014520 3300038443 Bacteria 8009
80 Ga0466968_0015000 3300044735 Bacteria 3069
81 Ga0466957_0089330 3300044842 Bacteria 1929
82 Ga0466959_0015742 3300045049 Bacteria 5516
83 Ga0495607_0000021 3300046501 Bacteria 164571
84 Ga0495632_0028907 3300046519 Bacteria 2891
85 Ga0495643_0003546 3300046522 Bacteria 11343
86 Ga0495654_0000340 3300046530 Bacteria 40748
87 Ga0495633_0090070 3300046558 Bacteria 1426
88 Ga0495625_0024711 3300046660 Bacteria 4568
89 Ga0495588_0023984 3300046674 Bacteria 3026
90 Ga0495681_0007876 3300047470 Bacteria 6737
91 Ga0495686_0022947 3300047472 Bacteria 4122
92 Ga0496111_0007885 3300048914 Bacteria 7019
93 Ga0496116_0000345 3300048919 Bacteria 73956
94 Ga0496117_0000002 3300048920 Bacteria 2483758
95 Ga0496117_0001837 3300048920 Bacteria 28723
96 Ga0496117_0071507 3300048920 Bacteria 2324
97 Ga0496117_0145353 3300048920 Bacteria 1413
98 Ga0496118_0004585 3300048921 Bacteria 16255
99 Ga0496118_0033849 3300048921 Bacteria 4183
100 Ga0496118_0077189 3300048921 Bacteria 2364
101 Ga0496120_0000248 3300048923 Bacteria 90783
102 Ga0496121_0001531 3300048924 Bacteria 38692
103 Ga0496121_0086278 3300048924 Bacteria 2467
104 Ga0496122_0000004 3300048925 Bacteria 645283
105 Ga0496122_0000157 3300048925 Bacteria 159733
106 Ga0496122_0000464 3300048925 Bacteria 84473
107 Ga0496122_0006630 3300048925 Bacteria 13203
108 Ga0496122_0040843 3300048925 Bacteria 3679
109 Ga0496122_0041866 3300048925 Bacteria 3613
110 Ga0496123_0000007 3300048926 Bacteria 645283
111 Ga0496123_0000048 3300048926 Bacteria 244152
112 Ga0496123_0000950 3300048926 Bacteria 45086
113 Ga0496123_0016939 3300048926 Bacteria 5887
114 Ga0496124_0000024 3300048927 Bacteria 414291
115 Ga0496124_0000252 3300048927 Bacteria 103596
116 Ga0496124_0002225 3300048927 Bacteria 25824
117 Ga0496124_0010618 3300048927 Bacteria 9306
118 Ga0496124_0029603 3300048927 Bacteria 4876
119 Ga0496124_0097557 3300048927 Bacteria 2386
120 Ga0496125_0018595 3300048928 Bacteria 6596
121 Ga0496125_0019596 3300048928 Bacteria 6374
122 Ga0496125_0153051 3300048928 Bacteria 1581
123 Ga0496125_0180722 3300048928 Bacteria 1406
124 Ga0496126_0000166 3300048929 Bacteria 152470
125 Ga0496126_0005871 3300048929 Bacteria 13847
126 Ga0496126_0093757 3300048929 Bacteria 2635
127 Ga0501031_0072421 3300049568 Bacteria 2243
128 Ga0501032_0128613 3300049569 Bacteria 1672
129 Ga0501038_0300792 3300049574 Bacteria 1259
130 Ga0501043_0085560 3300049579 Bacteria 2477
131 Ga0501035_0004571 3300049822 Bacteria 13124
132 Ga0501035_0005816 3300049822 Bacteria 11625
133 Ga0501035_0033876 3300049822 Bacteria 4643
134 Ga0501035_0134613 3300049822 Bacteria 2152
135 Ga0501044_0000102 3300049823 Bacteria 106408
136 Ga0501044_0003138 3300049823 Bacteria 18694
137 Ga0501044_0089674 3300049823 Bacteria 3103
138 Ga0501045_0266611 3300049824 Bacteria 1275
139 nmdc:mga00v17_241_c1 3300050491 Bacteria 32423
140 nmdc:mga00v17_2709_c1 3300050491 Bacteria 9090
141 nmdc:mga00v17_75575_c1 3300050491 Bacteria 2095
142 Ga0500578_0010727 3300053086 Bacteria 5919
143 Ga0500560_070729 3300053107 Bacteria 1149
144 Ga0500572_003154 3300053111 Bacteria 3818
145 Ga0500618_000888 3300053125 Bacteria 15820
146 Ga0500618_001919 3300053125 Bacteria 8578
147 Ga0500658_0001657 3300053134 Bacteria 8854
148 Ga0500659_0030327 3300053135 Bacteria 2954
149 Ga0500561_0001025 3300053137 Bacteria 4484
150 Ga0500573_0005132 3300053140 Bacteria 6984
151 Ga0500616_0000682 3300053153 Bacteria 39794
152 Ga0500616_0009563 3300053153 Bacteria 5888
153 Ga0500616_0108242 3300053153 Bacteria 1347
154 Ga0500624_000636 3300053157 Bacteria 9311
155 Ga0500627_0008986 3300053158 Bacteria 3578
156 Ga0500627_0113649 3300053158 Bacteria 1219
157 Ga0500634_0022679 3300053161 Bacteria 3409
158 Ga0500636_0000003 3300053177 Bacteria 240189
159 Ga0500636_0005034 3300053177 Bacteria 7504
160 Ga0587067_011035 3300059640 Bacteria 1383

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2970033650 2970035808 311
2 iso_pu_bacteria 2970068827 2970070660 311
3 iso_pu_bacteria 2984537506 2984541503 313
4 3300045049 Ga0466959_0015742 Ga0466959_0015742_3931_4911 315
5 3300021321 Ga0214542_1028192 Ga0214542_10281923 324
6 3300037418 Ga0395900_0128096 Ga0395900_0128096_46_1047 332
7 3300021327 Ga0214543_1009579 Ga0214543_100957913 333
8 3300049822 Ga0501035_0004571 Ga0501035_0004571_18_1070 350
9 3300053107 Ga0500560_070729 Ga0500560_070729_81_1133 350
10 3300044842 Ga0466957_0089330 Ga0466957_0089330_773_1855 351
11 3300005343 Ga0070687_100008024 Ga0070687_1000080242 354
12 3300025918 Ga0207662_10007924 Ga0207662_100079243 354
13 3300005578 Ga0068854_100007801 Ga0068854_1000078014 356
14 3300009551 Ga0105238_10089582 Ga0105238_100895821 356
15 3300025981 Ga0207640_10005767 Ga0207640_100057674 356
16 3300005327 Ga0070658_10054501 Ga0070658_100545012 357
17 3300005339 Ga0070660_100016101 Ga0070660_1000161012 357
18 3300005364 Ga0070673_100003710 Ga0070673_1000037107 357
19 3300025256 Ga0209759_1001151 Ga0209759_100115116 357
20 3300025256 Ga0209759_1006328 Ga0209759_10063284 357
21 3300025919 Ga0207657_10043363 Ga0207657_100433632 357
22 3300037466 Ga0395898_0026706 Ga0395898_0026706_2284_3375 357
23 3300046660 Ga0495625_0024711 Ga0495625_0024711_2007_3086 357
24 3300047472 Ga0495686_0022947 Ga0495686_0022947_36_1127 357
25 3300046501 Ga0495607_0000021 Ga0495607_0000021_158205_159332 359
26 iso_pu_bacteria 2510461069 2510839570 362
27 iso_pu_bacteria 2899803654 2899804232 362
28 iso_pu_bacteria 2547132374 2548500711 363
29 iso_pu_bacteria 2643221717 2644646739 363
30 3300021361 Ga0213872_10008682 Ga0213872_100086825 365
31 3300046519 Ga0495632_0028907 Ga0495632_0028907_293_1417 365
32 iso_pu_bacteria 2775507049 2776914082 365
33 iso_pu_bacteria 2537561587 2537876089 366
34 iso_pu_bacteria 2554235003 2554248311 366
35 iso_pu_bacteria 2558860242 2559295427 366
36 iso_pu_bacteria 2599185210 2599601742 366
37 iso_pu_bacteria 2599185307 2599974261 366
38 iso_pu_bacteria 2600255279 2601609998 366
39 iso_pu_bacteria 2600255308 2601746773 366
40 iso_pu_bacteria 2643221568 2643856665 366
41 iso_pu_bacteria 2643221582 2643920259 366
42 iso_pu_bacteria 2643221693 2644521878 366
43 iso_pu_bacteria 2738541317 2738947925 366
44 iso_pu_bacteria 2765235802 2765464499 366
45 iso_pu_bacteria 2808606387 2808987838 366
46 iso_pu_bacteria 2818991439 2819559141 366
47 iso_pu_bacteria 2838675328 2838675688 366
48 iso_pu_bacteria 2838714209 2838714570 366
49 iso_pu_bacteria 2838719591 2838721629 366
50 iso_pu_bacteria 2838724970 2838725330 366
51 iso_pu_bacteria 2841846520 2841848611 366
52 iso_pu_bacteria 2841859092 2841862210 366
53 iso_pu_bacteria 2842124991 2842125358 366
54 iso_pu_bacteria 2842130223 2842130583 366
55 iso_pu_bacteria 2842152218 2842154247 366
56 iso_pu_bacteria 2842170452 2842170814 366
57 iso_pu_bacteria 2842175837 2842177867 366
58 iso_pu_bacteria 2842187318 2842187679 366
59 iso_pu_bacteria 2842211629 2842211990 366
60 iso_pu_bacteria 2842224351 2842226391 366
61 iso_pu_bacteria 2842515876 2842518994 366
62 iso_pu_bacteria 2899792073 2899795969 366
63 iso_pu_bacteria 2899845264 2899847829 366
64 iso_pu_bacteria 2913308742 2913312867 366
65 iso_pu_bacteria 2919114240 2919114606 366
66 iso_pu_bacteria 2919166419 2919169413 366
67 iso_pu_bacteria 2926754445 2926755623 366
68 iso_pu_bacteria 2926760298 2926762748 366
69 iso_pu_bacteria 2933006813 2933008892 366
70 iso_pu_bacteria 2933011516 2933014833 366
71 iso_pu_bacteria 2933594066 2933596511 366
72 iso_pu_bacteria 2978969890 2978974723 366
73 iso_pu_bacteria 2979089926 2979094762 366
74 iso_pu_bacteria 2979095461 2979100672 366
75 iso_pu_bacteria 2979100975 2979103995 366
76 iso_pu_bacteria 2984509177 2984511436 366
77 iso_pu_bacteria 2984518228 2984522203 366
78 iso_pu_bacteria 2984587000 2984590101 366
79 iso_pu_bacteria 2984601300 2984603779 366
80 iso_pu_bacteria 3002141150 3002145249 366
81 iso_pu_bacteria 650716007 650740635 366
82 iso_pu_bacteria 8003570095 8003571708 366
83 iso_pu_bacteria 8054460903 8054463066 366
84 3300027876 Ga0209974_10001299 Ga0209974_100012995 367
85 3300031548 Ga0307408_100000128 Ga0307408_10000012873 367
86 3300031901 Ga0307406_10000073 Ga0307406_1000007338 367
87 iso_pu_bacteria 2904434214 2904436303 367
88 iso_pu_bacteria 2926760298 2926765241 367
89 3300025273 Ga0209673_1007335 Ga0209673_10073354 368
90 3300046522 Ga0495643_0003546 Ga0495643_0003546_3987_5111 368
91 3300053086 Ga0500578_0010727 Ga0500578_0010727_3436_4560 368
92 3300053134 Ga0500658_0001657 Ga0500658_0001657_7221_8345 368
93 3300053135 Ga0500659_0030327 Ga0500659_0030327_1071_2195 368
94 3300053153 Ga0500616_0009563 Ga0500616_0009563_3478_4602 368
95 iso_pu_bacteria 2857542790 2857545124 368
96 iso_pu_bacteria 2924158325 2924159029 368
97 iso_pu_bacteria 2937098957 2937100151 368
98 iso_pu_bacteria 2977551784 2977554464 368
99 3300031235 Ga0265330_10000037 Ga0265330_1000003732 369
100 3300031238 Ga0265332_10000008 Ga0265332_1000000880 369
101 3300031241 Ga0265325_10007670 Ga0265325_100076702 369
102 3300031247 Ga0265340_10014498 Ga0265340_100144984 369
103 3300031711 Ga0265314_10000065 Ga0265314_1000006566 369
104 iso_pu_bacteria 2510917026 2511170253 369
105 iso_pu_bacteria 2512875026 2512971766 369
106 iso_pu_bacteria 2513237089 2513605243 369
107 iso_pu_bacteria 2513237156 2513986854 369
108 iso_pu_bacteria 2513237160 2514005314 369
109 iso_pu_bacteria 2517487022 2517569574 369
110 iso_pu_bacteria 2582581283 2585167361 369
111 iso_pu_bacteria 2582581294 2585202082 369
112 iso_pu_bacteria 2585427633 2585996575 369
113 iso_pu_bacteria 2585427634 2586001104 369
114 iso_pu_bacteria 2599185236 2599721783 369
115 iso_pu_bacteria 2600254933 2600374194 369
116 iso_pu_bacteria 2643221558 2643811399 369
117 iso_pu_bacteria 2643221607 2644050314 369
118 iso_pu_bacteria 2643221636 2644204624 369
119 iso_pu_bacteria 2643221686 2644483234 369
120 iso_pu_bacteria 2802428858 2802718764 369
121 iso_pu_bacteria 2802428859 2802726377 369
122 iso_pu_bacteria 2802428860 2802732916 369
123 iso_pu_bacteria 2802428861 2802738272 369
124 iso_pu_bacteria 2802428862 2802744605 369
125 iso_pu_bacteria 2802428863 2802751189 369
126 iso_pu_bacteria 2818991461 2819685060 369
127 iso_pu_bacteria 2821123053 2821127385 369
128 iso_pu_bacteria 2838074704 2838078780 369
129 iso_pu_bacteria 2838736955 2838737910 369
130 iso_pu_bacteria 2841840854 2841841721 369
131 iso_pu_bacteria 2842140634 2842141499 369
132 iso_pu_bacteria 2854896431 2854901243 369
133 iso_pu_bacteria 2854916844 2854918624 369
134 iso_pu_bacteria 2857531043 2857537151 369
135 iso_pu_bacteria 2857576091 2857576754 369
136 iso_pu_bacteria 2891373044 2891373494 369
137 iso_pu_bacteria 2915980308 2915985320 369
138 iso_pu_bacteria 2916061851 2916062337 369
139 iso_pu_bacteria 2919171160 2919172862 369
140 iso_pu_bacteria 2921250672 2921253964 369
141 iso_pu_bacteria 2937029754 2937032674 369
142 iso_pu_bacteria 2937036028 2937042392 369
143 iso_pu_bacteria 2937078374 2937082614 369
144 iso_pu_bacteria 2957375807 2957379398 369
145 iso_pu_bacteria 2957437181 2957440551 369
146 iso_pu_bacteria 2960591022 2960596256 369
147 iso_pu_bacteria 2960631154 2960632670 369
148 iso_pu_bacteria 2960680706 2960686951 369
149 iso_pu_bacteria 2967686174 2967687249 369
150 iso_pu_bacteria 2967728569 2967734393 369
151 iso_pu_bacteria 2970026789 2970029275 369
152 iso_pu_bacteria 2970122695 2970126931 369
153 iso_pu_bacteria 2970143518 2970147700 369
154 iso_pu_bacteria 2977530762 2977535726 369
155 iso_pu_bacteria 2977544691 2977550465 369
156 iso_pu_bacteria 8003999396 8004000709 369
157 iso_pu_bacteria 8018150411 8018152761 369
158 iso_pu_bacteria 8024486573 8024488154 369
159 iso_pu_bacteria 8056875544 8056875691 369
160 3300003323 rootH1_10073995 rootH1_100739954 370
161 3300003763 Ga0055529_1001395 Ga0055529_10013953 370
162 3300003856 Ga0058692_1002151 Ga0058692_10021511 370
163 3300005353 Ga0070669_100120333 Ga0070669_1001203332 370
164 3300005548 Ga0070665_100004767 Ga0070665_1000047679 370
165 3300006042 Ga0075368_10003839 Ga0075368_100038394 370
166 3300006948 Ga0099826_10000476 Ga0099826_100004764 370
167 3300006948 Ga0099826_10007518 Ga0099826_100075188 370
168 3300007788 Ga0099795_10059432 Ga0099795_100594322 370
169 3300013100 Ga0157373_10001470 Ga0157373_1000147013 370
170 3300013102 Ga0157371_10000017 Ga0157371_10000017143 370
171 3300013102 Ga0157371_10002714 Ga0157371_100027145 370
172 3300013104 Ga0157370_10000453 Ga0157370_1000045338 370
173 3300025228 Ga0209672_102787 Ga0209672_1027873 370
174 3300025242 Ga0209258_103845 Ga0209258_1038453 370
175 3300025272 Ga0209455_1000522 Ga0209455_100052224 370
176 3300025294 Ga0209025_1000213 Ga0209025_100021380 370
177 3300025923 Ga0207681_10089654 Ga0207681_100896542 370
178 3300025972 Ga0207668_10029347 Ga0207668_100293471 370
179 3300027312 Ga0209371_1000022 Ga0209371_1000022166 370
180 3300027312 Ga0209371_1000173 Ga0209371_100017374 370
181 3300027312 Ga0209371_1000709 Ga0209371_10007093 370
182 3300027666 Ga0209282_1002318 Ga0209282_10023183 370
183 3300030500 Ga0268256_1000019 Ga0268256_1000019354 370
184 3300030500 Ga0268256_1007878 Ga0268256_10078783 370
185 3300037418 Ga0395900_0000021 Ga0395900_0000021_39752_40867 370
186 3300037466 Ga0395898_0002409 Ga0395898_0002409_19727_20842 370
187 3300037471 Ga0395905_0000912 Ga0395905_0000912_26144_27259 370
188 3300038443 Ga0395901_0014520 Ga0395901_0014520_5377_6492 370
189 3300046558 Ga0495633_0090070 Ga0495633_0090070_299_1411 370
190 3300046674 Ga0495588_0023984 Ga0495588_0023984_445_1557 370
191 3300047470 Ga0495681_0007876 Ga0495681_0007876_924_2036 370
192 3300048919 Ga0496116_0000345 Ga0496116_0000345_22916_24028 370
193 3300048920 Ga0496117_0000002 Ga0496117_0000002_377278_378390 370
194 3300048920 Ga0496117_0071507 Ga0496117_0071507_172_1284 370
195 3300048921 Ga0496118_0004585 Ga0496118_0004585_10371_11483 370
196 3300048921 Ga0496118_0033849 Ga0496118_0033849_2645_3757 370
197 3300048921 Ga0496118_0077189 Ga0496118_0077189_549_1661 370
198 3300048923 Ga0496120_0000248 Ga0496120_0000248_73326_74438 370
199 3300048925 Ga0496122_0000004 Ga0496122_0000004_267287_268399 370
200 3300048925 Ga0496122_0006630 Ga0496122_0006630_4218_5330 370
201 3300048925 Ga0496122_0041866 Ga0496122_0041866_2379_3491 370
202 3300048926 Ga0496123_0000007 Ga0496123_0000007_267287_268399 370
203 3300048927 Ga0496124_0000252 Ga0496124_0000252_36241_37353 370
204 3300048927 Ga0496124_0010618 Ga0496124_0010618_883_1995 370
205 3300048928 Ga0496125_0019596 Ga0496125_0019596_1785_2897 370
206 3300048929 Ga0496126_0000166 Ga0496126_0000166_77045_78157 370
207 3300048929 Ga0496126_0093757 Ga0496126_0093757_108_1220 370
208 3300049822 Ga0501035_0005816 Ga0501035_0005816_1411_2523 370
209 3300049822 Ga0501035_0033876 Ga0501035_0033876_1792_2904 370
210 3300049823 Ga0501044_0000102 Ga0501044_0000102_24333_25445 370
211 3300049823 Ga0501044_0003138 Ga0501044_0003138_5985_7097 370
212 3300050491 nmdc:mga00v17_2709_c1 nmdc:mga00v17_2709_c1_827_1939 370
213 3300050491 nmdc:mga00v17_75575_c1 nmdc:mga00v17_75575_c1_134_1246 370
214 3300053111 Ga0500572_003154 Ga0500572_003154_2636_3748 370
215 3300053137 Ga0500561_0001025 Ga0500561_0001025_2598_3710 370
216 3300053140 Ga0500573_0005132 Ga0500573_0005132_5009_6121 370
217 3300053153 Ga0500616_0108242 Ga0500616_0108242_103_1218 370
218 3300053157 Ga0500624_000636 Ga0500624_000636_4195_5307 370
219 3300053161 Ga0500634_0022679 Ga0500634_0022679_744_1856 370
220 3300053177 Ga0500636_0000003 Ga0500636_0000003_149288_150400 370
221 3300053177 Ga0500636_0005034 Ga0500636_0005034_3342_4454 370
222 3300059640 Ga0587067_011035 Ga0587067_011035_80_1192 370
223 3300005347 Ga0070668_100069988 Ga0070668_1000699882 371
224 3300028379 Ga0268266_10191403 Ga0268266_101914032 371
225 3300048927 Ga0496124_0000024 Ga0496124_0000024_222667_223815 372
226 3300003187 JGI25151J46595_10017305 JGI25151J46595_100173053 373
227 3300003323 rootH1_10073997 rootH1_100739974 373
228 3300003781 Ga0055536_1002954 Ga0055536_10029544 373
229 3300003792 Ga0055540_1002924 Ga0055540_10029245 373
230 3300003794 Ga0055531_10001447 Ga0055531_100014476 373
231 3300006051 Ga0075364_10000790 Ga0075364_1000079012 373
232 3300006946 Ga0079104_1000045 Ga0079104_1000045101 373
233 3300013105 Ga0157369_10122740 Ga0157369_101227402 373
234 3300022739 Ga0228711_1004633 Ga0228711_10046335 373
235 3300022740 Ga0228710_1000006 Ga0228710_1000006187 373
236 3300025292 Ga0209676_1010766 Ga0209676_10107664 373
237 3300025294 Ga0209025_1000171 Ga0209025_1000171130 373
238 3300025297 Ga0209758_1001364 Ga0209758_100136416 373
239 3300025303 Ga0209051_1000645 Ga0209051_100064540 373
240 3300025304 Ga0209257_1002946 Ga0209257_10029469 373
241 3300027111 Ga0209281_1000034 Ga0209281_1000034177 373
242 3300027111 Ga0209281_1000508 Ga0209281_10005086 373
243 3300027666 Ga0209282_1000116 Ga0209282_10001166 373
244 3300028794 Ga0307515_10000017 Ga0307515_100000175 373
245 3300031456 Ga0307513_10002030 Ga0307513_100020305 373
246 3300031967 Ga0315914_1000008 Ga0315914_1000008186 373
247 3300033430 Ga0315913_1002685 Ga0315913_10026855 373
248 3300033464 Ga0315915_1000058 Ga0315915_100005821 373
249 3300044735 Ga0466968_0015000 Ga0466968_0015000_773_1894 373
250 3300046530 Ga0495654_0000340 Ga0495654_0000340_22808_23932 373
251 3300048914 Ga0496111_0007885 Ga0496111_0007885_4818_5939 373
252 3300048920 Ga0496117_0001837 Ga0496117_0001837_3564_4685 373
253 3300048920 Ga0496117_0145353 Ga0496117_0145353_35_1159 373
254 3300048924 Ga0496121_0001531 Ga0496121_0001531_2594_3721 373
255 3300048924 Ga0496121_0086278 Ga0496121_0086278_650_1771 373
256 3300048925 Ga0496122_0000157 Ga0496122_0000157_50696_51817 373
257 3300048925 Ga0496122_0000464 Ga0496122_0000464_5646_6767 373
258 3300048925 Ga0496122_0040843 Ga0496122_0040843_2455_3576 373
259 3300048926 Ga0496123_0000048 Ga0496123_0000048_192336_193457 373
260 3300048926 Ga0496123_0000950 Ga0496123_0000950_42638_43759 373
261 3300048926 Ga0496123_0016939 Ga0496123_0016939_3997_5118 373
262 3300048927 Ga0496124_0002225 Ga0496124_0002225_1471_2592 373
263 3300048927 Ga0496124_0029603 Ga0496124_0029603_838_1959 373
264 3300048927 Ga0496124_0097557 Ga0496124_0097557_292_1413 373
265 3300048928 Ga0496125_0018595 Ga0496125_0018595_2827_3948 373
266 3300048928 Ga0496125_0153051 Ga0496125_0153051_29_1150 373
267 3300048928 Ga0496125_0180722 Ga0496125_0180722_28_1149 373
268 3300048929 Ga0496126_0005871 Ga0496126_0005871_11067_12188 373
269 3300049568 Ga0501031_0072421 Ga0501031_0072421_192_1313 373
270 3300049569 Ga0501032_0128613 Ga0501032_0128613_503_1624 373
271 3300049574 Ga0501038_0300792 Ga0501038_0300792_61_1182 373
272 3300049579 Ga0501043_0085560 Ga0501043_0085560_121_1242 373
273 3300049822 Ga0501035_0134613 Ga0501035_0134613_677_1798 373
274 3300049823 Ga0501044_0089674 Ga0501044_0089674_679_1800 373
275 3300049824 Ga0501045_0266611 Ga0501045_0266611_115_1236 373
276 3300050491 nmdc:mga00v17_241_c1 nmdc:mga00v17_241_c1_28620_29747 373
277 3300053125 Ga0500618_000888 Ga0500618_000888_376_1497 373
278 3300053125 Ga0500618_001919 Ga0500618_001919_4778_5899 373
279 3300053153 Ga0500616_0000682 Ga0500616_0000682_13284_14405 373
280 3300053158 Ga0500627_0008986 Ga0500627_0008986_1456_2580 373
281 3300053158 Ga0500627_0113649 Ga0500627_0113649_43_1164 373

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00724

Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

20

365

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jip-assembly1.cif.gz_A crystal structure of glycerol trinitrate reductase nera from agrobacterium radiobacter in complex with 4-hydroxybenzaldehyde 0.995 2 371
4jip-assembly1.cif.gz_A crystal structure of glycerol trinitrate reductase nera from agrobacterium radiobacter in complex with 4-hydroxybenzaldehyde 0.9923 2 371
5epd-assembly1.cif.gz_A crystal structure of glycerol trinitrate reductase xdpb from agrobacterium sp. r89-1 (apo form) 0.9737 3 373
2abb-assembly1.cif.gz_A structure of petn reductase y186f in complex with cyanide 0.968 4 369
2r14-assembly1.cif.gz_A-2 structure of morphinone reductase in complex with tetrahydronad 0.9674 1 371
ID Description Score Start End Superfamily
4jicB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9947 2 371 3.20.20.70
4jicB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.992 2 371 3.20.20.70
2r14A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9674 1 371 3.20.20.70
2r14A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9517 1 371 3.20.20.70
4a3uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9514 2 369 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A164GDP6-F1-model_v4 NADH-dependent flavin oxidoreductase yqiG-like protein 1.002 160 257 GO:0005829
GO:0010181
GO:0016491
AF-A0A6M1QEG4-F1-model_v4 deleted 0.998 1 110
AF-A0A6M1QEG4-F1-model_v4 deleted 0.989 1 110
AF-A0A2G6YUA1-F1-model_v4 N-ethylmaleimide reductase 0.9876 1 371 GO:0005829
GO:0010181
GO:0016491
AF-A0A447M584-F1-model_v4 deleted 0.9854 165 254

Feature Viewer

pLDDT pTM Quality
95.16 0.94 High
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Predicted Structure (AlphaFold2)

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