F384200

General Info

Members Datasets Scaffolds Average Seq Length
281 206 238 191

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10080511|Ga0081539_100805112
Length 209
Sequence MSVPSKTGRRVPHNLRGMRELVCTAFMSLDGVVDSPGGGPGEEHRSAGWVFKGIEFRPEAYALKGEELAETSALMFGRRSYESFAQTWPGSADHVDYKELPKYVVSSTLSEDALVGGWGEITILRSTADVAKLKDGEGGAIFIHGSAELARTLSDAGLVDRYHLLVFPVLLGAGKSLFSDADRDKQMLRLRESASYPNGVVKLTYDVVG

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
4 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
5 2643221692 Nocardia sp. Root136 Isolate Unclassified
6 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
7 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
8 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
9 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
10 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
11 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
12 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
13 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
14 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
15 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
16 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
17 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
18 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
19 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
20 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
21 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
22 2855683550 Micromonospora sp. RP3T Isolate Unclassified
23 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
24 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
25 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
26 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
27 2858882152 Micromonospora noduli MED15 Isolate Nodule
28 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
29 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
30 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
31 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
32 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
33 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
34 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
35 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
36 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
37 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
38 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
39 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
40 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
41 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
43 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
44 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
45 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
46 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
47 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
48 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
49 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
50 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
51 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
52 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
53 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
54 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
55 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
56 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
57 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
58 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
59 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
60 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
61 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
62 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
63 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
64 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
65 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
66 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
67 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
68 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
69 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
70 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
71 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
72 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
73 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
74 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
75 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
76 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
77 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
78 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
79 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
80 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
81 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
82 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
83 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
84 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
85 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
86 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
87 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
88 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
89 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
90 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
91 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
92 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
93 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
94 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
95 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
96 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
97 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
98 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
99 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
100 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
101 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
102 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
103 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
104 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
105 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
106 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
107 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
108 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
109 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
110 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
111 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
112 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
113 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
114 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
115 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
116 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
117 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
118 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
119 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
120 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
121 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
155 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
157 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
159 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
160 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
161 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
162 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
163 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
164 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
165 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
166 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
167 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
168 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
169 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
170 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
171 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
172 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
173 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
174 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
175 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
176 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
177 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
178 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
179 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
180 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
181 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
182 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
183 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
184 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
185 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
186 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
187 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
188 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
189 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
190 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
191 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
192 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
193 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
194 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
195 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
196 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
197 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
198 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
199 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
200 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
201 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
202 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
203 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
204 649633069 Micromonospora sp. L5 Isolate Unclassified
205 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
206 8054727385 Micromonospora alfalfae MED01 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.63
Metatranscriptomes 1.07
Isolates 15.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.63
Nodule 1.42
Rhizoplane 4.27
Rhizosphere 76.87
Stem 0
Stem Tuber 0
Unclassified 12.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003061 3300003203 Bacteria 7871
2 rootH1_10109296 3300003316 Bacteria 1239
3 Ga0070658_10014312 3300005327 Bacteria 6364
4 Ga0070683_100001502 3300005329 Bacteria 18009
5 Ga0070683_100093973 3300005329 Bacteria 2818
6 Ga0070683_100175619 3300005329 Bacteria 2033
7 Ga0070670_100051014 3300005331 Bacteria 3554
8 Ga0068868_100004697 3300005338 Bacteria 9594
9 Ga0070660_100020943 3300005339 Bacteria 4814
10 Ga0070661_100018544 3300005344 Bacteria 4948
11 Ga0070661_100252474 3300005344 Bacteria 1361
12 Ga0070692_10028998 3300005345 Bacteria 2756
13 Ga0070668_100000429 3300005347 Bacteria 27725
14 Ga0070668_100078383 3300005347 Bacteria 2584
15 Ga0070669_100363486 3300005353 Bacteria 1177
16 Ga0070675_100000248 3300005354 Bacteria 35032
17 Ga0070675_100851461 3300005354 Bacteria 834
18 Ga0070674_100583547 3300005356 Bacteria 942
19 Ga0070659_100198555 3300005366 Bacteria 1650
20 Ga0070667_100344651 3300005367 Bacteria 1348
21 Ga0070714_100105047 3300005435 Bacteria 2493
22 Ga0070713_100487376 3300005436 Bacteria 1162
23 Ga0070711_100471866 3300005439 Bacteria 1030
24 Ga0070700_100012911 3300005441 Bacteria 4680
25 Ga0070678_100350567 3300005456 Bacteria 1269
26 Ga0070662_100005194 3300005457 Bacteria 8308
27 Ga0070681_10034203 3300005458 Bacteria 5104
28 Ga0070681_10259581 3300005458 Bacteria 1649
29 Ga0070707_100014600 3300005468 Bacteria 7366
30 Ga0070699_100006236 3300005518 Bacteria 10406
31 Ga0070679_100027906 3300005530 Bacteria 5562
32 Ga0070684_100012841 3300005535 Bacteria 6728
33 Ga0070684_100071703 3300005535 Bacteria 3048
34 Ga0070684_100126095 3300005535 Bacteria 2306
35 Ga0070697_100348164 3300005536 Bacteria 1279
36 Ga0068853_100622311 3300005539 Bacteria 1026
37 Ga0070672_100184773 3300005543 Bacteria 1738
38 Ga0070665_101045087 3300005548 Bacteria 829
39 Ga0070664_100014925 3300005564 Bacteria 6338
40 Ga0070664_100054237 3300005564 Bacteria 3401
41 Ga0070664_100063979 3300005564 Bacteria 3137
42 Ga0068857_100465083 3300005577 Bacteria 1184
43 Ga0068857_100555717 3300005577 Bacteria 1082
44 Ga0068856_100206856 3300005614 Bacteria 1977
45 Ga0068856_100747103 3300005614 Bacteria 998
46 Ga0068856_100958171 3300005614 Bacteria 874
47 Ga0070702_100074431 3300005615 Bacteria 2015
48 Ga0068852_100008205 3300005616 Bacteria 7673
49 Ga0068859_100544750 3300005617 Bacteria 1255
50 Ga0068864_100054087 3300005618 Bacteria 3464
51 Ga0068861_100533954 3300005719 Bacteria 1066
52 Ga0068861_100914299 3300005719 Bacteria 832
53 Ga0068870_10353456 3300005840 Bacteria 944
54 Ga0068863_100117963 3300005841 Bacteria 2529
55 Ga0068863_100406840 3300005841 Bacteria 1332
56 Ga0068863_100420022 3300005841 Bacteria 1310
57 Ga0068858_100037146 3300005842 Bacteria 4516
58 Ga0068860_100013975 3300005843 Bacteria 7873
59 Ga0068860_100040204 3300005843 Bacteria 4471
60 Ga0068862_100029932 3300005844 Bacteria 4588
61 Ga0068862_100061620 3300005844 Bacteria 3225
62 Ga0081455_10264418 3300005937 Bacteria 1251
63 Ga0081539_10000241 3300005985 Bacteria 128623
64 Ga0081539_10080511 3300005985 Bacteria 1713
65 Ga0075365_10020400 3300006038 Bacteria 4108
66 Ga0075365_10359671 3300006038 Bacteria 1026
67 Ga0075364_10016192 3300006051 Bacteria 4637
68 Ga0075364_10043868 3300006051 Bacteria 2908
69 Ga0070712_100229429 3300006175 Bacteria 1474
70 Ga0070712_100481073 3300006175 Bacteria 1038
71 Ga0075362_10059770 3300006177 Bacteria 1722
72 Ga0075367_10123400 3300006178 Bacteria 1597
73 Ga0068871_100904980 3300006358 Bacteria 818
74 Ga0075428_100150857 3300006844 Bacteria 2525
75 Ga0075428_100194845 3300006844 Bacteria 2191
76 Ga0075428_100570230 3300006844 Bacteria 1210
77 Ga0075430_100003530 3300006846 Bacteria 13092
78 Ga0075430_100304141 3300006846 Bacteria 1319
79 Ga0075430_100435655 3300006846 Bacteria 1082
80 Ga0075431_100197675 3300006847 Bacteria 2058
81 Ga0075433_10330843 3300006852 Bacteria 1347
82 Ga0075429_100103873 3300006880 Bacteria 2481
83 Ga0097620_100544846 3300006931 Bacteria 1255
84 Ga0105251_10141295 3300009011 Bacteria 1089
85 Ga0111539_10028593 3300009094 Bacteria 6800
86 Ga0105245_10005385 3300009098 Bacteria 11246
87 Ga0114129_10241703 3300009147 Bacteria 2427
88 Ga0114129_10303644 3300009147 Bacteria 2126
89 Ga0105243_10007965 3300009148 Bacteria 8141
90 Ga0105243_10041351 3300009148 Bacteria 3605
91 Ga0105243_10346875 3300009148 Bacteria 1362
92 Ga0105241_10185049 3300009174 Bacteria 1730
93 Ga0105242_10699454 3300009176 Bacteria 991
94 Ga0105248_10053123 3300009177 Bacteria 4546
95 Ga0105248_10347980 3300009177 Bacteria 1668
96 Ga0105238_10126956 3300009551 Bacteria 2529
97 Ga0105239_10120306 3300010375 Bacteria 2915
98 Ga0105239_11104729 3300010375 Bacteria 913
99 Ga0157370_10338100 3300013104 Bacteria 1388
100 Ga0157369_10008260 3300013105 Bacteria 11934
101 Ga0157378_10364113 3300013297 Bacteria 1416
102 Ga0157372_10162985 3300013307 Bacteria 2577
103 Ga0157375_10007849 3300013308 Bacteria 9339
104 Ga0163163_10004531 3300014325 Bacteria 11863
105 Ga0163163_10156453 3300014325 Bacteria 2324
106 Ga0157380_10036560 3300014326 Bacteria 3800
107 Ga0157380_10102278 3300014326 Bacteria 2389
108 Ga0157380_10615428 3300014326 Bacteria 1077
109 Ga0157380_11591122 3300014326 Bacteria 709
110 Ga0157377_10002718 3300014745 Bacteria 7864
111 Ga0157379_10154224 3300014968 Bacteria 2072
112 Ga0157379_10471443 3300014968 Bacteria 1161
113 Ga0157376_10054133 3300014969 Bacteria 3344
114 Ga0206356_10397201 3300020070 Bacteria 2485
115 Ga0206353_11224426 3300020082 Bacteria 2418
116 Ga0224712_10040513 3300022467 Bacteria 1753
117 Ga0207713_1074805 3300025735 Bacteria 1238
118 Ga0207688_10030127 3300025901 Bacteria 2991
119 Ga0207705_10418623 3300025909 Bacteria 1037
120 Ga0207657_10018673 3300025919 Bacteria 6609
121 Ga0207657_10096464 3300025919 Bacteria 2459
122 Ga0207649_10009719 3300025920 Bacteria 5268
123 Ga0207649_10117512 3300025920 Bacteria 1788
124 Ga0207652_10356517 3300025921 Bacteria 1320
125 Ga0207646_10008044 3300025922 Bacteria 10631
126 Ga0207650_10036494 3300025925 Bacteria 3577
127 Ga0207659_10007626 3300025926 Bacteria 6674
128 Ga0207687_10008811 3300025927 Bacteria 6593
129 Ga0207700_10380778 3300025928 Bacteria 1234
130 Ga0207690_10192516 3300025932 Bacteria 1543
131 Ga0207706_10010409 3300025933 Bacteria 8496
132 Ga0207709_10007026 3300025935 Bacteria 6294
133 Ga0207709_10125381 3300025935 Bacteria 1741
134 Ga0207709_10200072 3300025935 Bacteria 1426
135 Ga0207669_10293745 3300025937 Bacteria 1232
136 Ga0207669_10994889 3300025937 Bacteria 704
137 Ga0207691_10654166 3300025940 Bacteria 888
138 Ga0207661_10001669 3300025944 Bacteria 15132
139 Ga0207661_10011784 3300025944 Bacteria 6349
140 Ga0207661_10138026 3300025944 Bacteria 2096
141 Ga0207679_10027530 3300025945 Bacteria 3932
142 Ga0207679_10031787 3300025945 Bacteria 3698
143 Ga0207679_10113844 3300025945 Bacteria 2141
144 Ga0207679_10348990 3300025945 Bacteria 1289
145 Ga0207679_10375046 3300025945 Bacteria 1246
146 Ga0207712_10035049 3300025961 Bacteria 3405
147 Ga0207668_10000990 3300025972 Bacteria 17079
148 Ga0207668_10263033 3300025972 Bacteria 1407
149 Ga0207668_10264401 3300025972 Bacteria 1403
150 Ga0207640_10069310 3300025981 Bacteria 2367
151 Ga0207658_10329529 3300025986 Bacteria 1324
152 Ga0207677_10021884 3300026023 Bacteria 3918
153 Ga0207703_10654178 3300026035 Bacteria 997
154 Ga0207639_10576829 3300026041 Bacteria 1035
155 Ga0207639_10585274 3300026041 Bacteria 1028
156 Ga0207678_10288195 3300026067 Bacteria 1410
157 Ga0207702_10142594 3300026078 Bacteria 2170
158 Ga0207702_10594247 3300026078 Bacteria 1086
159 Ga0207702_10868228 3300026078 Bacteria 893
160 Ga0207641_10090745 3300026088 Bacteria 2673
161 Ga0207648_11346108 3300026089 Bacteria 671
162 Ga0207676_10291776 3300026095 Bacteria 1485
163 Ga0207674_10148900 3300026116 Bacteria 2298
164 Ga0207674_10220436 3300026116 Bacteria 1845
165 Ga0207674_10465546 3300026116 Bacteria 1222
166 Ga0207675_100190637 3300026118 Bacteria 1966
167 Ga0207675_100265525 3300026118 Bacteria 1664
168 Ga0207683_10264357 3300026121 Bacteria 1571
169 Ga0207683_10736306 3300026121 Bacteria 914
170 Ga0207428_10042899 3300027907 Bacteria 3657
171 Ga0268266_10689087 3300028379 Bacteria 985
172 Ga0268265_10105211 3300028380 Bacteria 2289
173 Ga0268264_10010120 3300028381 Bacteria 7805
174 Ga0268264_10556969 3300028381 Bacteria 1125
175 Ga0307515_10033452 3300028794 Bacteria 8463
176 Ga0307513_10021309 3300031456 Bacteria 7652
177 Ga0307513_10103623 3300031456 Bacteria 2861
178 Ga0307513_10156188 3300031456 Bacteria 2181
179 Ga0307509_10339147 3300031507 Bacteria 1231
180 Ga0307509_10440526 3300031507 Bacteria 999
181 Ga0307408_100423284 3300031548 Bacteria 1149
182 Ga0307516_10002219 3300031730 Bacteria 26301
183 Ga0307413_10858228 3300031824 Bacteria 768
184 Ga0307410_10209177 3300031852 Bacteria 1494
185 Ga0307410_10808007 3300031852 Bacteria 798
186 Ga0326468_10008331 3300031889 Bacteria 1002
187 Ga0307406_10463823 3300031901 Bacteria 1019
188 Ga0307409_100230455 3300031995 Bacteria 1679
189 Ga0307416_100491228 3300032002 Bacteria 1290
190 Ga0307416_100704793 3300032002 Bacteria 1099
191 Ga0307416_101590931 3300032002 Bacteria 759
192 Ga0307414_10216432 3300032004 Bacteria 1570
193 Ga0307415_100005895 3300032126 Bacteria 6554
194 Ga0307415_100113027 3300032126 Bacteria 2019
195 Ga0307415_100407303 3300032126 Bacteria 1163
196 Ga0373951_0000081 3300035091 Bacteria 37714
197 Ga0373942_0000226 3300035207 Bacteria 14874
198 Ga0373962_0010293 3300035242 Bacteria 2329
199 Ga0373925_0592652 3300037068 Bacteria 913
200 Ga0395898_1107027 3300037466 Bacteria 725
201 Ga0436362_0755486 3300039453 Bacteria 3240
202 Ga0451807_2407829 3300041486 Bacteria 1282
203 Ga0451853_3265374 3300041512 Bacteria 692
204 Ga0466960_0024523 3300044901 Bacteria 2722
205 Ga0495638_0028057 3300046460 Bacteria 3638
206 Ga0496102_0918249 3300048905 Bacteria 797
207 Ga0496104_0093481 3300048907 Bacteria 2876
208 Ga0496105_0138611 3300048908 Bacteria 2003
209 Ga0496108_0000003 3300048911 Bacteria 595687
210 Ga0496109_0293638 3300048912 Bacteria 1532
211 Ga0496110_0187106 3300048913 Bacteria 1880
212 Ga0496111_0082834 3300048914 Bacteria 2343
213 Ga0496112_0057004 3300048915 Bacteria 3846
214 Ga0496112_1487387 3300048915 Bacteria 591
215 Ga0496113_0005225 3300048916 Bacteria 8081
216 Ga0496114_0419207 3300048917 Bacteria 1186
217 Ga0501034_0041091 3300049571 Bacteria 4679
218 nmdc:mga03n38_77357_c1 3300050490 Bacteria 1555
219 nmdc:mga00v17_13648_c1 3300050491 Bacteria 4515
220 nmdc:mga00v17_373502_c1 3300050491 Bacteria 927
221 nmdc:mga0yw44_343921_c1 3300050492 Bacteria 1003
222 nmdc:mga0yw44_9493_c1 3300050492 Bacteria 4925
223 nmdc:mga06z11_136945_c1 3300050494 Bacteria 1380
224 nmdc:mga05p37_117331_c1 3300050507 Bacteria 3271
225 nmdc:mga05p37_3876_c1 3300050507 Bacteria 17489
226 nmdc:mga09592_168100_c1 3300050508 Bacteria 1896
227 nmdc:mga09592_775872_c1 3300050508 Bacteria 812
228 nmdc:mga09592_95387_c1 3300050508 Bacteria 2545
229 nmdc:mga0qj67_120871_c1 3300050509 Bacteria 2119
230 nmdc:mga0qj67_294093_c1 3300050509 Bacteria 1316
231 nmdc:mga0qj67_451460_c1 3300050509 Bacteria 1035
232 nmdc:mga06r32_134821_c1 3300050510 Bacteria 2444
233 nmdc:mga06r32_446384_c1 3300050510 Bacteria 1273
234 nmdc:mga06r32_6929_c1 3300050510 Bacteria 10192
235 nmdc:mga08y16_20325_c1 3300050511 Bacteria 7009
236 nmdc:mga0a205_349061_c1 3300050515 Bacteria 1347
237 Ga0500616_0007240 3300053153 Bacteria 7086
238 Ga0501084_0092780 3300054114 Bacteria 2535

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005339 Ga0070660_100020943 Ga0070660_1000209435 172
2 3300025919 Ga0207657_10018673 Ga0207657_100186736 172
3 iso_pu_bacteria 2501939600 2501941135 178
4 iso_pu_bacteria 649633069 649812266 178
5 3300044901 Ga0466960_0024523 Ga0466960_0024523_2066_2611 180
6 3300048915 Ga0496112_1487387 Ga0496112_1487387_25_576 182
7 3300050509 nmdc:mga0qj67_451460_c1 nmdc:mga0qj67_451460_c1_20_571 182
8 3300009148 Ga0105243_10007965 Ga0105243_100079652 183
9 3300031889 Ga0326468_10008331 Ga0326468_100083312 183
10 3300037466 Ga0395898_1107027 Ga0395898_1107027_70_666 183
11 iso_pu_bacteria 2643221692 2644515442 186
12 iso_pu_bacteria 2738543011 2739236225 186
13 iso_pu_bacteria 2808606700 2810364543 186
14 iso_pu_bacteria 2816332119 2816425079 186
15 iso_pu_bacteria 2842888712 2842891041 186
16 iso_pu_bacteria 2848551377 2848554085 186
17 iso_pu_bacteria 2857737099 2857737978 186
18 iso_pu_bacteria 2862290372 2862293525 186
19 iso_pu_bacteria 2884693830 2884698819 186
20 iso_pu_bacteria 2889300758 2889304592 186
21 iso_pu_bacteria 2895442618 2895449023 186
22 iso_pu_bacteria 2939743619 2939745020 186
23 iso_pu_bacteria 2515154129 2515722548 187
24 iso_pu_bacteria 2515154155 2515855498 187
25 iso_pu_bacteria 2515154202 2516085424 187
26 iso_pu_bacteria 2675903059 2676484586 187
27 iso_pu_bacteria 2751185782 2753264309 187
28 iso_pu_bacteria 2772190715 2772647360 187
29 iso_pu_bacteria 2773857762 2774394166 187
30 iso_pu_bacteria 2791354901 2791913734 187
31 iso_pu_bacteria 2808606439 2809194974 187
32 iso_pu_bacteria 2811994878 2812349877 187
33 iso_pu_bacteria 2811994917 2812483367 187
34 iso_pu_bacteria 2837268691 2837272130 187
35 iso_pu_bacteria 2855670206 2855673280 187
36 iso_pu_bacteria 2855676851 2855681079 187
37 iso_pu_bacteria 2855683550 2855683562 187
38 iso_pu_bacteria 2856858025 2856861663 187
39 iso_pu_bacteria 2857288857 2857293527 187
40 iso_pu_bacteria 2858848962 2858851333 187
41 iso_pu_bacteria 2858882152 2858887588 187
42 iso_pu_bacteria 2858888857 2858892705 187
43 iso_pu_bacteria 2858895516 2858897051 187
44 iso_pu_bacteria 2869048445 2869050744 187
45 iso_pu_bacteria 2869061728 2869068213 187
46 iso_pu_bacteria 2869068681 2869070154 187
47 iso_pu_bacteria 2880495981 2880500711 187
48 iso_pu_bacteria 2891968417 2891972545 187
49 iso_pu_bacteria 2895427314 2895431463 187
50 iso_pu_bacteria 8054704163 8054706116 187
51 iso_pu_bacteria 8054727385 8054730377 187
52 3300006051 Ga0075364_10043868 Ga0075364_100438682 188
53 3300050491 nmdc:mga00v17_13648_c1 nmdc:mga00v17_13648_c1_170_742 188
54 3300005354 Ga0070675_100851461 Ga0070675_1008514611 189
55 3300005719 Ga0068861_100533954 Ga0068861_1005339542 189
56 3300005840 Ga0068870_10353456 Ga0068870_103534561 189
57 3300005843 Ga0068860_100040204 Ga0068860_1000402043 189
58 3300006175 Ga0070712_100229429 Ga0070712_1002294292 189
59 3300006177 Ga0075362_10059770 Ga0075362_100597702 189
60 3300006178 Ga0075367_10123400 Ga0075367_101234003 189
61 3300006358 Ga0068871_100904980 Ga0068871_1009049801 189
62 3300009148 Ga0105243_10041351 Ga0105243_100413513 189
63 3300009177 Ga0105248_10347980 Ga0105248_103479802 189
64 3300013308 Ga0157375_10007849 Ga0157375_100078492 189
65 3300014326 Ga0157380_10036560 Ga0157380_100365603 189
66 3300014326 Ga0157380_11591122 Ga0157380_115911221 189
67 3300014969 Ga0157376_10054133 Ga0157376_100541332 189
68 3300025935 Ga0207709_10007026 Ga0207709_100070266 189
69 3300025935 Ga0207709_10125381 Ga0207709_101253812 189
70 3300025961 Ga0207712_10035049 Ga0207712_100350493 189
71 3300025972 Ga0207668_10263033 Ga0207668_102630331 189
72 3300026118 Ga0207675_100190637 Ga0207675_1001906372 189
73 3300026118 Ga0207675_100265525 Ga0207675_1002655251 189
74 3300028794 Ga0307515_10033452 Ga0307515_100334528 189
75 3300037068 Ga0373925_0592652 Ga0373925_0592652_93_668 189
76 3300039453 Ga0436362_0755486 Ga0436362_0755486_448_1020 189
77 3300041486 Ga0451807_2407829 Ga0451807_2407829_570_1142 189
78 3300048917 Ga0496114_0419207 Ga0496114_0419207_205_780 189
79 3300049571 Ga0501034_0041091 Ga0501034_0041091_3154_3729 189
80 3300050490 nmdc:mga03n38_77357_c1 nmdc:mga03n38_77357_c1_271_846 189
81 3300050491 nmdc:mga00v17_373502_c1 nmdc:mga00v17_373502_c1_176_751 189
82 3300050494 nmdc:mga06z11_136945_c1 nmdc:mga06z11_136945_c1_151_726 189
83 3300005436 Ga0070713_100487376 Ga0070713_1004873762 190
84 3300005439 Ga0070711_100471866 Ga0070711_1004718662 190
85 3300005614 Ga0068856_100206856 Ga0068856_1002068562 190
86 3300005617 Ga0068859_100544750 Ga0068859_1005447502 190
87 3300005618 Ga0068864_100054087 Ga0068864_1000540874 190
88 3300005841 Ga0068863_100406840 Ga0068863_1004068402 190
89 3300006175 Ga0070712_100481073 Ga0070712_1004810732 190
90 3300006931 Ga0097620_100544846 Ga0097620_1005448462 190
91 3300009011 Ga0105251_10141295 Ga0105251_101412952 190
92 3300009177 Ga0105248_10053123 Ga0105248_100531234 190
93 3300014325 Ga0163163_10004531 Ga0163163_100045311 190
94 3300014326 Ga0157380_10615428 Ga0157380_106154282 190
95 3300014968 Ga0157379_10471443 Ga0157379_104714432 190
96 3300025735 Ga0207713_1074805 Ga0207713_10748052 190
97 3300025928 Ga0207700_10380778 Ga0207700_103807782 190
98 3300025937 Ga0207669_10293745 Ga0207669_102937452 190
99 3300025945 Ga0207679_10348990 Ga0207679_103489902 190
100 3300026078 Ga0207702_10142594 Ga0207702_101425942 190
101 3300026095 Ga0207676_10291776 Ga0207676_102917761 190
102 3300026116 Ga0207674_10148900 Ga0207674_101489003 190
103 3300028381 Ga0268264_10556969 Ga0268264_105569692 190
104 3300031824 Ga0307413_10858228 Ga0307413_108582281 190
105 3300031852 Ga0307410_10808007 Ga0307410_108080071 190
106 3300048905 Ga0496102_0918249 Ga0496102_0918249_94_669 190
107 3300048907 Ga0496104_0093481 Ga0496104_0093481_2235_2810 190
108 3300048908 Ga0496105_0138611 Ga0496105_0138611_60_635 190
109 3300048912 Ga0496109_0293638 Ga0496109_0293638_853_1428 190
110 3300048913 Ga0496110_0187106 Ga0496110_0187106_342_917 190
111 3300048914 Ga0496111_0082834 Ga0496111_0082834_1672_2247 190
112 3300048916 Ga0496113_0005225 Ga0496113_0005225_4810_5385 190
113 3300003203 JGI25406J46586_10003061 JGI25406J46586_1000306110 191
114 3300003316 rootH1_10109296 rootH1_101092962 191
115 3300005327 Ga0070658_10014312 Ga0070658_100143122 191
116 3300005329 Ga0070683_100001502 Ga0070683_10000150210 191
117 3300005329 Ga0070683_100093973 Ga0070683_1000939733 191
118 3300005329 Ga0070683_100175619 Ga0070683_1001756192 191
119 3300005331 Ga0070670_100051014 Ga0070670_1000510142 191
120 3300005338 Ga0068868_100004697 Ga0068868_1000046978 191
121 3300005344 Ga0070661_100018544 Ga0070661_1000185445 191
122 3300005344 Ga0070661_100252474 Ga0070661_1002524742 191
123 3300005345 Ga0070692_10028998 Ga0070692_100289982 191
124 3300005347 Ga0070668_100000429 Ga0070668_10000042912 191
125 3300005347 Ga0070668_100078383 Ga0070668_1000783833 191
126 3300005353 Ga0070669_100363486 Ga0070669_1003634862 191
127 3300005354 Ga0070675_100000248 Ga0070675_10000024829 191
128 3300005356 Ga0070674_100583547 Ga0070674_1005835472 191
129 3300005366 Ga0070659_100198555 Ga0070659_1001985552 191
130 3300005367 Ga0070667_100344651 Ga0070667_1003446512 191
131 3300005435 Ga0070714_100105047 Ga0070714_1001050472 191
132 3300005441 Ga0070700_100012911 Ga0070700_1000129112 191
133 3300005456 Ga0070678_100350567 Ga0070678_1003505672 191
134 3300005457 Ga0070662_100005194 Ga0070662_1000051948 191
135 3300005458 Ga0070681_10034203 Ga0070681_100342034 191
136 3300005458 Ga0070681_10259581 Ga0070681_102595811 191
137 3300005468 Ga0070707_100014600 Ga0070707_1000146004 191
138 3300005518 Ga0070699_100006236 Ga0070699_10000623611 191
139 3300005530 Ga0070679_100027906 Ga0070679_1000279066 191
140 3300005535 Ga0070684_100012841 Ga0070684_1000128415 191
141 3300005535 Ga0070684_100071703 Ga0070684_1000717033 191
142 3300005535 Ga0070684_100126095 Ga0070684_1001260953 191
143 3300005536 Ga0070697_100348164 Ga0070697_1003481642 191
144 3300005539 Ga0068853_100622311 Ga0068853_1006223111 191
145 3300005543 Ga0070672_100184773 Ga0070672_1001847731 191
146 3300005548 Ga0070665_101045087 Ga0070665_1010450871 191
147 3300005564 Ga0070664_100014925 Ga0070664_1000149255 191
148 3300005564 Ga0070664_100054237 Ga0070664_1000542373 191
149 3300005564 Ga0070664_100063979 Ga0070664_1000639792 191
150 3300005577 Ga0068857_100465083 Ga0068857_1004650832 191
151 3300005577 Ga0068857_100555717 Ga0068857_1005557172 191
152 3300005614 Ga0068856_100747103 Ga0068856_1007471032 191
153 3300005614 Ga0068856_100958171 Ga0068856_1009581711 191
154 3300005615 Ga0070702_100074431 Ga0070702_1000744312 191
155 3300005616 Ga0068852_100008205 Ga0068852_1000082053 191
156 3300005719 Ga0068861_100914299 Ga0068861_1009142992 191
157 3300005841 Ga0068863_100117963 Ga0068863_1001179632 191
158 3300005841 Ga0068863_100420022 Ga0068863_1004200221 191
159 3300005842 Ga0068858_100037146 Ga0068858_1000371462 191
160 3300005843 Ga0068860_100013975 Ga0068860_1000139756 191
161 3300005844 Ga0068862_100029932 Ga0068862_1000299324 191
162 3300005844 Ga0068862_100061620 Ga0068862_1000616203 191
163 3300005937 Ga0081455_10264418 Ga0081455_102644182 191
164 3300005985 Ga0081539_10000241 Ga0081539_10000241100 191
165 3300005985 Ga0081539_10080511 Ga0081539_100805112 191
166 3300006038 Ga0075365_10020400 Ga0075365_100204005 191
167 3300006038 Ga0075365_10359671 Ga0075365_103596712 191
168 3300006051 Ga0075364_10016192 Ga0075364_100161922 191
169 3300006844 Ga0075428_100150857 Ga0075428_1001508573 191
170 3300006844 Ga0075428_100194845 Ga0075428_1001948452 191
171 3300006844 Ga0075428_100570230 Ga0075428_1005702302 191
172 3300006846 Ga0075430_100003530 Ga0075430_10000353011 191
173 3300006846 Ga0075430_100304141 Ga0075430_1003041412 191
174 3300006846 Ga0075430_100435655 Ga0075430_1004356551 191
175 3300006847 Ga0075431_100197675 Ga0075431_1001976751 191
176 3300006852 Ga0075433_10330843 Ga0075433_103308432 191
177 3300006880 Ga0075429_100103873 Ga0075429_1001038733 191
178 3300009094 Ga0111539_10028593 Ga0111539_100285937 191
179 3300009098 Ga0105245_10005385 Ga0105245_100053857 191
180 3300009147 Ga0114129_10241703 Ga0114129_102417033 191
181 3300009147 Ga0114129_10303644 Ga0114129_103036442 191
182 3300009148 Ga0105243_10346875 Ga0105243_103468752 191
183 3300009174 Ga0105241_10185049 Ga0105241_101850492 191
184 3300009176 Ga0105242_10699454 Ga0105242_106994542 191
185 3300009551 Ga0105238_10126956 Ga0105238_101269561 191
186 3300010375 Ga0105239_10120306 Ga0105239_101203062 191
187 3300010375 Ga0105239_11104729 Ga0105239_111047292 191
188 3300013104 Ga0157370_10338100 Ga0157370_103381001 191
189 3300013105 Ga0157369_10008260 Ga0157369_1000826011 191
190 3300013297 Ga0157378_10364113 Ga0157378_103641132 191
191 3300013307 Ga0157372_10162985 Ga0157372_101629852 191
192 3300014325 Ga0163163_10156453 Ga0163163_101564532 191
193 3300014326 Ga0157380_10102278 Ga0157380_101022783 191
194 3300014745 Ga0157377_10002718 Ga0157377_100027188 191
195 3300014968 Ga0157379_10154224 Ga0157379_101542242 191
196 3300020070 Ga0206356_10397201 Ga0206356_103972012 191
197 3300020082 Ga0206353_11224426 Ga0206353_112244262 191
198 3300022467 Ga0224712_10040513 Ga0224712_100405132 191
199 3300025901 Ga0207688_10030127 Ga0207688_100301273 191
200 3300025909 Ga0207705_10418623 Ga0207705_104186231 191
201 3300025919 Ga0207657_10096464 Ga0207657_100964642 191
202 3300025920 Ga0207649_10009719 Ga0207649_100097193 191
203 3300025920 Ga0207649_10117512 Ga0207649_101175122 191
204 3300025921 Ga0207652_10356517 Ga0207652_103565172 191
205 3300025922 Ga0207646_10008044 Ga0207646_100080443 191
206 3300025925 Ga0207650_10036494 Ga0207650_100364944 191
207 3300025926 Ga0207659_10007626 Ga0207659_100076267 191
208 3300025927 Ga0207687_10008811 Ga0207687_100088115 191
209 3300025932 Ga0207690_10192516 Ga0207690_101925162 191
210 3300025933 Ga0207706_10010409 Ga0207706_100104098 191
211 3300025935 Ga0207709_10200072 Ga0207709_102000722 191
212 3300025937 Ga0207669_10994889 Ga0207669_109948891 191
213 3300025940 Ga0207691_10654166 Ga0207691_106541662 191
214 3300025944 Ga0207661_10001669 Ga0207661_100016693 191
215 3300025944 Ga0207661_10011784 Ga0207661_100117842 191
216 3300025944 Ga0207661_10138026 Ga0207661_101380262 191
217 3300025945 Ga0207679_10027530 Ga0207679_100275304 191
218 3300025945 Ga0207679_10031787 Ga0207679_100317874 191
219 3300025945 Ga0207679_10113844 Ga0207679_101138442 191
220 3300025945 Ga0207679_10375046 Ga0207679_103750462 191
221 3300025972 Ga0207668_10000990 Ga0207668_100009909 191
222 3300025972 Ga0207668_10264401 Ga0207668_102644011 191
223 3300025981 Ga0207640_10069310 Ga0207640_100693101 191
224 3300025986 Ga0207658_10329529 Ga0207658_103295292 191
225 3300026023 Ga0207677_10021884 Ga0207677_100218842 191
226 3300026035 Ga0207703_10654178 Ga0207703_106541781 191
227 3300026041 Ga0207639_10576829 Ga0207639_105768291 191
228 3300026041 Ga0207639_10585274 Ga0207639_105852741 191
229 3300026067 Ga0207678_10288195 Ga0207678_102881952 191
230 3300026078 Ga0207702_10594247 Ga0207702_105942472 191
231 3300026078 Ga0207702_10868228 Ga0207702_108682282 191
232 3300026088 Ga0207641_10090745 Ga0207641_100907452 191
233 3300026089 Ga0207648_11346108 Ga0207648_113461081 191
234 3300026116 Ga0207674_10220436 Ga0207674_102204362 191
235 3300026116 Ga0207674_10465546 Ga0207674_104655462 191
236 3300026121 Ga0207683_10264357 Ga0207683_102643572 191
237 3300026121 Ga0207683_10736306 Ga0207683_107363062 191
238 3300027907 Ga0207428_10042899 Ga0207428_100428994 191
239 3300028379 Ga0268266_10689087 Ga0268266_106890872 191
240 3300028380 Ga0268265_10105211 Ga0268265_101052112 191
241 3300028381 Ga0268264_10010120 Ga0268264_100101203 191
242 3300031456 Ga0307513_10021309 Ga0307513_100213092 191
243 3300031456 Ga0307513_10103623 Ga0307513_101036233 191
244 3300031456 Ga0307513_10156188 Ga0307513_101561883 191
245 3300031507 Ga0307509_10339147 Ga0307509_103391472 191
246 3300031507 Ga0307509_10440526 Ga0307509_104405262 191
247 3300031548 Ga0307408_100423284 Ga0307408_1004232842 191
248 3300031730 Ga0307516_10002219 Ga0307516_1000221912 191
249 3300031852 Ga0307410_10209177 Ga0307410_102091773 191
250 3300031901 Ga0307406_10463823 Ga0307406_104638232 191
251 3300031995 Ga0307409_100230455 Ga0307409_1002304552 191
252 3300032002 Ga0307416_100491228 Ga0307416_1004912282 191
253 3300032002 Ga0307416_100704793 Ga0307416_1007047932 191
254 3300032002 Ga0307416_101590931 Ga0307416_1015909312 191
255 3300032004 Ga0307414_10216432 Ga0307414_102164321 191
256 3300032126 Ga0307415_100005895 Ga0307415_1000058952 191
257 3300032126 Ga0307415_100113027 Ga0307415_1001130273 191
258 3300032126 Ga0307415_100407303 Ga0307415_1004073032 191
259 3300035091 Ga0373951_0000081 Ga0373951_0000081_11611_12189 191
260 3300035207 Ga0373942_0000226 Ga0373942_0000226_580_1158 191
261 3300035242 Ga0373962_0010293 Ga0373962_0010293_1739_2317 191
262 3300041512 Ga0451853_3265374 Ga0451853_3265374_32_610 191
263 3300046460 Ga0495638_0028057 Ga0495638_0028057_1070_1648 191
264 3300048911 Ga0496108_0000003 Ga0496108_0000003_2071_2649 191
265 3300048915 Ga0496112_0057004 Ga0496112_0057004_2038_2616 191
266 3300050492 nmdc:mga0yw44_343921_c1 nmdc:mga0yw44_343921_c1_309_887 191
267 3300050492 nmdc:mga0yw44_9493_c1 nmdc:mga0yw44_9493_c1_2747_3325 191
268 3300050507 nmdc:mga05p37_117331_c1 nmdc:mga05p37_117331_c1_1019_1597 191
269 3300050507 nmdc:mga05p37_3876_c1 nmdc:mga05p37_3876_c1_15345_15968 191
270 3300050508 nmdc:mga09592_168100_c1 nmdc:mga09592_168100_c1_830_1408 191
271 3300050508 nmdc:mga09592_775872_c1 nmdc:mga09592_775872_c1_45_668 191
272 3300050508 nmdc:mga09592_95387_c1 nmdc:mga09592_95387_c1_1817_2449 191
273 3300050509 nmdc:mga0qj67_120871_c1 nmdc:mga0qj67_120871_c1_642_1274 191
274 3300050509 nmdc:mga0qj67_294093_c1 nmdc:mga0qj67_294093_c1_528_1106 191
275 3300050510 nmdc:mga06r32_134821_c1 nmdc:mga06r32_134821_c1_893_1525 191
276 3300050510 nmdc:mga06r32_446384_c1 nmdc:mga06r32_446384_c1_259_837 191
277 3300050510 nmdc:mga06r32_6929_c1 nmdc:mga06r32_6929_c1_3619_4197 191
278 3300050511 nmdc:mga08y16_20325_c1 nmdc:mga08y16_20325_c1_4876_5454 191
279 3300050515 nmdc:mga0a205_349061_c1 nmdc:mga0a205_349061_c1_532_1110 191
280 3300053153 Ga0500616_0007240 Ga0500616_0007240_5297_5875 191
281 3300054114 Ga0501084_0092780 Ga0501084_0092780_722_1297 191

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

19

202

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xh2-assembly1.cif.gz_A dihydrofolate reductase-like protein sach in safracin biosynthesis 0.8019 1 190
7xh2-assembly1.cif.gz_A dihydrofolate reductase-like protein sach in safracin biosynthesis 0.7978 1 190
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.7885 1 191
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.7877 1 191
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.7845 1 191
ID Description Score Start End Superfamily
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7884 1 191 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7842 1 191 3.40.430.10
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7827 4 189 3.40.430.10
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7707 4 189 3.40.430.10
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7499 2 188 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A640SB65-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9759 58 191 GO:0008703
GO:0009231
AF-A0A1C4YPK6-F1-model_v4 Dihydrofolate reductase 0.9744 36 191 GO:0008703
GO:0009231
AF-A0A6G3QLR4-F1-model_v4 Dihydrofolate reductase family protein 0.9737 48 178 GO:0008703
GO:0009231
AF-A0A6G2VQZ6-F1-model_v4 Deaminase 0.9697 101 191 GO:0008703
GO:0009231
AF-A0A6G3QLR4-F1-model_v4 Dihydrofolate reductase family protein 0.9664 48 178 GO:0008703
GO:0009231

Feature Viewer

pLDDT pTM Quality
84.87 0.82 High
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Predicted Structure (AlphaFold2)

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