F384198

General Info

Members Datasets Scaffolds Average Seq Length
281 163 562 458

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1007825|Ga0081540_10078252
Length 486
Sequence MEPSVASRKAATWHVARLAPAPVELRRIAETLSPSQIVGDTSVEISDLAYDTRAVTPGALFFCVRGARFDGHELADRAIDAGAAALVVEKPVASRVPQVVVDDSRGAMAVAALEFFRHPSDELKIAAVTGTNGKTTTAFLLYSILEAAGRKPGLLGTIESRIGGEVRPAVRTTPEAIDLQRAFREMLDAGDRSAAMEATSHGSELGRLVGIRFSSLAFTNLTQDHLDLHGTMEAYFEAKRRLFLEGRPPAAINVGDPWGRKLADDRPDALTYGFADDAEIRPDALDAIDLKLKGRFNVENALAALASGRLLGIDDDAIAQGLETVHGVPGRFEAVDEGQPFTVLVDYAHTPDSLANVLTTARELTSGRLLCVFGCGGDRDREKRPIMGRIAAELADVPIVTSDNPRSEDPGAIIDEIVAGIPGDAEIIQDRRSAIAHAIEIAEPGDVVVIAGKGHEQGQQFRDRTVPFDDREVAREALRRLRAATT

Samples

Sample ID Description Type Environment
1 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
60 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
61 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
62 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
89 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
92 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
93 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
118 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
134 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
161 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
162 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.86
Metatranscriptomes 2.14
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.12
Rhizosphere 92.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081540_1007825 3300005983 Bacteria 7559
2 Ga0070658_10001851 3300005327 Bacteria 17821
3 Ga0070658_10005711 3300005327 Bacteria 10092
4 Ga0070658_10059693 3300005327 Bacteria 3106
5 Ga0070683_100028518 3300005329 Bacteria 5045
6 Ga0070683_100105714 3300005329 Bacteria 2654
7 Ga0070680_100172161 3300005336 Bacteria 1822
8 Ga0070660_100028685 3300005339 Bacteria 4165
9 Ga0070661_100006571 3300005344 Bacteria 8017
10 Ga0070709_10050580 3300005434 Bacteria 2604
11 Ga0070714_100032459 3300005435 Bacteria 4358
12 Ga0070714_100067139 3300005435 Bacteria 3091
13 Ga0070714_100123626 3300005435 Bacteria 2304
14 Ga0070713_100018007 3300005436 Bacteria 5362
15 Ga0070713_100098684 3300005436 Bacteria 2526
16 Ga0070710_10008143 3300005437 Bacteria 5096
17 Ga0070710_10008998 3300005437 Bacteria 4879
18 Ga0070711_100056877 3300005439 Bacteria 2706
19 Ga0070681_10039665 3300005458 Bacteria 4720
20 Ga0070681_10062050 3300005458 Bacteria 3712
21 Ga0070707_100000791 3300005468 Bacteria 31274
22 Ga0070698_100110954 3300005471 Bacteria 2707
23 Ga0070698_100169032 3300005471 Bacteria 2128
24 Ga0070679_100038203 3300005530 Bacteria 4772
25 Ga0070679_100064908 3300005530 Bacteria 3639
26 Ga0070679_100124885 3300005530 Bacteria 2556
27 Ga0070684_100023274 3300005535 Bacteria 5178
28 Ga0070695_100000081 3300005545 Bacteria 39746
29 Ga0070696_100140502 3300005546 Bacteria 1765
30 Ga0068856_100048829 3300005614 Bacteria 4171
31 Ga0068863_100132050 3300005841 Bacteria 2384
32 Ga0081455_10058557 3300005937 Bacteria 3259
33 Ga0070717_10007218 3300006028 Bacteria 8242
34 Ga0070717_10011959 3300006028 Bacteria 6605
35 Ga0070717_10018547 3300006028 Bacteria 5436
36 Ga0070717_10200749 3300006028 Bacteria 1747
37 Ga0070715_10000337 3300006163 Bacteria 11710
38 Ga0070716_100008088 3300006173 Bacteria 5207
39 Ga0075428_100007495 3300006844 Bacteria 12091
40 Ga0075431_100168652 3300006847 Bacteria 2250
41 Ga0075433_10004438 3300006852 Bacteria 10926
42 Ga0075434_100039931 3300006871 Bacteria 4648
43 Ga0075434_100220271 3300006871 Bacteria 1917
44 Ga0075429_100187581 3300006880 Bacteria 1812
45 Ga0075436_100001552 3300006914 Bacteria 15683
46 Ga0075435_100009972 3300007076 Bacteria 6922
47 Ga0105240_10005137 3300009093 Bacteria 19588
48 Ga0105240_10076716 3300009093 Bacteria 4120
49 Ga0114129_10000727 3300009147 Bacteria 41768
50 Ga0114129_10001349 3300009147 Bacteria 32919
51 Ga0105237_10049413 3300009545 Bacteria 4228
52 Ga0157370_10046779 3300013104 Bacteria 4148
53 Ga0157369_10012525 3300013105 Bacteria 9621
54 Ga0157369_10060098 3300013105 Bacteria 4098
55 Ga0182006_1023047 3300015261 Bacteria 2580
56 Ga0206356_11061657 3300020070 Bacteria 3024
57 Ga0206354_10916785 3300020081 Bacteria 2874
58 Ga0206354_11605825 3300020081 Bacteria 1705
59 Ga0206353_10503490 3300020082 Bacteria 1940
60 Ga0206353_10678990 3300020082 Bacteria 8457
61 Ga0206353_11508237 3300020082 Bacteria 3797
62 Ga0207692_10005256 3300025898 Bacteria 5174
63 Ga0207692_10012182 3300025898 Bacteria 3686
64 Ga0207685_10012105 3300025905 Bacteria 2621
65 Ga0207699_10017224 3300025906 Bacteria 3797
66 Ga0207707_10039400 3300025912 Bacteria 4130
67 Ga0207707_10119379 3300025912 Bacteria 2305
68 Ga0207695_10103455 3300025913 Bacteria 2839
69 Ga0207693_10002985 3300025915 Bacteria 14650
70 Ga0207693_10005999 3300025915 Bacteria 10073
71 Ga0207660_10022772 3300025917 Bacteria 4223
72 Ga0207657_10017811 3300025919 Bacteria 6800
73 Ga0207657_10021993 3300025919 Bacteria 5987
74 Ga0207657_10071745 3300025919 Bacteria 2932
75 Ga0207652_10005556 3300025921 Bacteria 10219
76 Ga0207652_10013742 3300025921 Bacteria 6547
77 Ga0207652_10050022 3300025921 Bacteria 3580
78 Ga0207646_10002005 3300025922 Bacteria 24487
79 Ga0207700_10053351 3300025928 Bacteria 3029
80 Ga0207664_10025681 3300025929 Bacteria 4441
81 Ga0207664_10041184 3300025929 Bacteria 3597
82 Ga0207664_10072199 3300025929 Bacteria 2782
83 Ga0207664_10113834 3300025929 Bacteria 2253
84 Ga0207664_10116129 3300025929 Bacteria 2232
85 Ga0207644_10063334 3300025931 Bacteria 2685
86 Ga0207690_10041653 3300025932 Bacteria 3011
87 Ga0207704_10093945 3300025938 Bacteria 1979
88 Ga0207665_10000148 3300025939 Bacteria 47520
89 Ga0207661_10040667 3300025944 Bacteria 3656
90 Ga0207641_10209282 3300026088 Bacteria 1803
91 Ga0265319_1001707 3300028563 Bacteria 12671
92 Ga0265319_1040222 3300028563 Bacteria 1582
93 Ga0265318_10000858 3300028577 Bacteria 20003
94 Ga0265323_10025206 3300028653 Bacteria 2253
95 Ga0265322_10018975 3300028654 Bacteria 1974
96 Ga0265338_10001956 3300028800 Bacteria 32135
97 Ga0265338_10003793 3300028800 Bacteria 21009
98 Ga0265338_10042852 3300028800 Bacteria 4207
99 Ga0265338_10055642 3300028800 Bacteria 3517
100 Ga0265330_10000745 3300031235 Bacteria 20548
101 Ga0265328_10010044 3300031239 Bacteria 3826
102 Ga0265320_10008102 3300031240 Bacteria 6461
103 Ga0265325_10000817 3300031241 Bacteria 22571
104 Ga0265325_10039798 3300031241 Bacteria 2472
105 Ga0265329_10007706 3300031242 Bacteria 4138
106 Ga0265340_10002260 3300031247 Bacteria 11009
107 Ga0265339_10007219 3300031249 Bacteria 7199
108 Ga0265339_10010366 3300031249 Bacteria 5792
109 Ga0265331_10010396 3300031250 Bacteria 5151
110 Ga0265327_10016750 3300031251 Bacteria 4633
111 Ga0265316_10005490 3300031344 Bacteria 12307
112 Ga0265316_10034681 3300031344 Bacteria 4097
113 Ga0265316_10057085 3300031344 Bacteria 3046
114 Ga0265313_10004865 3300031595 Bacteria 10085
115 Ga0265314_10022207 3300031711 Bacteria 4863
116 Ga0265314_10067819 3300031711 Bacteria 2400
117 Ga0265314_10079333 3300031711 Bacteria 2171
118 Ga0265342_10008008 3300031712 Bacteria 7653
119 Ga0373939_0021763 3300035114 Bacteria 1760
120 Ga0373933_0108543 3300035724 Bacteria 1729
121 Ga0373947_0081243 3300035725 Bacteria 2007
122 Ga0373937_0199439 3300036401 Bacteria 1881
123 Ga0395899_0026085 3300037312 Bacteria 4410
124 Ga0395899_0050298 3300037312 Bacteria 3095
125 Ga0395899_0110218 3300037312 Bacteria 1980
126 Ga0395900_0003522 3300037418 Bacteria 16880
127 Ga0395900_0008090 3300037418 Bacteria 10825
128 Ga0395900_0015585 3300037418 Bacteria 7747
129 Ga0395900_0017254 3300037418 Bacteria 7368
130 Ga0395900_0310465 3300037418 Bacteria 1560
131 Ga0395898_0001607 3300037466 Bacteria 30809
132 Ga0395898_0003184 3300037466 Bacteria 18478
133 Ga0395898_0026282 3300037466 Bacteria 5860
134 Ga0395898_0029166 3300037466 Bacteria 5529
135 Ga0395898_0039102 3300037466 Bacteria 4697
136 Ga0395905_0005743 3300037471 Bacteria 12619
137 Ga0395905_0011298 3300037471 Bacteria 8633
138 Ga0395905_0065265 3300037471 Bacteria 3408
139 Ga0395905_0093259 3300037471 Bacteria 2824
140 Ga0395905_0108221 3300037471 Bacteria 2609
141 Ga0395901_0000621 3300038443 Bacteria 41173
142 Ga0395901_0005093 3300038443 Bacteria 13273
143 Ga0395901_0029721 3300038443 Bacteria 5627
144 Ga0395901_0029821 3300038443 Bacteria 5619
145 Ga0395901_0038571 3300038443 Bacteria 4942
146 Ga0395901_0051771 3300038443 Bacteria 4268
147 Ga0395901_0056662 3300038443 Bacteria 4077
148 Ga0436360_0877568 3300039438 Bacteria 5964
149 Ga0466969_0001011 3300044656 Bacteria 15226
150 Ga0466966_0006780 3300044684 Bacteria 7583
151 Ga0466966_0011462 3300044684 Bacteria 5880
152 Ga0466961_0031686 3300044693 Bacteria 3400
153 Ga0466963_0000676 3300044694 Bacteria 16549
154 Ga0466963_0001948 3300044694 Bacteria 11320
155 Ga0466963_0005109 3300044694 Bacteria 7664
156 Ga0466963_0013251 3300044694 Bacteria 5060
157 Ga0466963_0014576 3300044694 Bacteria 4851
158 Ga0466963_0019291 3300044694 Bacteria 4274
159 Ga0466963_0030965 3300044694 Bacteria 3455
160 Ga0466963_0044483 3300044694 Bacteria 2923
161 Ga0466963_0062663 3300044694 Bacteria 2487
162 Ga0466963_0087160 3300044694 Bacteria 2122
163 Ga0466964_0003074 3300044706 Bacteria 6064
164 Ga0466964_0008749 3300044706 Bacteria 3804
165 Ga0466971_0018733 3300044719 Bacteria 3069
166 Ga0466971_0046750 3300044719 Bacteria 1945
167 Ga0466968_0002003 3300044735 Bacteria 7406
168 Ga0466968_0002921 3300044735 Bacteria 6312
169 Ga0466968_0009603 3300044735 Bacteria 3726
170 Ga0466970_0016544 3300044765 Bacteria 3806
171 Ga0466957_0013001 3300044842 Bacteria 4823
172 Ga0466957_0043175 3300044842 Bacteria 2729
173 Ga0466957_0072902 3300044842 Bacteria 2127
174 Ga0466960_0015821 3300044901 Bacteria 3260
175 Ga0466960_0017183 3300044901 Bacteria 3149
176 Ga0466959_0011355 3300045049 Bacteria 6398
177 Ga0466959_0015611 3300045049 Bacteria 5537
178 Ga0466959_0127845 3300045049 Bacteria 1802
179 Ga0466958_0003078 3300045836 Bacteria 8555
180 Ga0466958_0017635 3300045836 Bacteria 4131
181 Ga0466958_0032693 3300045836 Bacteria 3096
182 Ga0466958_0047478 3300045836 Bacteria 2592
183 Ga0466967_0003653 3300045976 Bacteria 10121
184 Ga0466967_0003851 3300045976 Bacteria 9938
185 Ga0466967_0008005 3300045976 Bacteria 7699
186 Ga0466967_0016015 3300045976 Bacteria 5897
187 Ga0466967_0027470 3300045976 Bacteria 4735
188 Ga0466967_0029590 3300045976 Bacteria 4585
189 Ga0466967_0078452 3300045976 Bacteria 2975
190 Ga0466967_0114038 3300045976 Bacteria 2487
191 Ga0466967_0115437 3300045976 Bacteria 2472
192 Ga0466967_0352121 3300045976 Bacteria 1425
193 Ga0495592_0000881 3300046454 Bacteria 20811
194 Ga0495592_0011657 3300046454 Bacteria 6658
195 Ga0495603_0051582 3300046455 Bacteria 2444
196 Ga0495629_0111432 3300046459 Bacteria 1908
197 Ga0495641_0056877 3300046461 Bacteria 1772
198 Ga0495651_0000295 3300046462 Bacteria 38814
199 Ga0495651_0067321 3300046462 Bacteria 2732
200 Ga0495653_0001972 3300046463 Bacteria 16161
201 Ga0495582_0009191 3300046473 Bacteria 5452
202 Ga0495664_0009483 3300046477 Bacteria 5448
203 Ga0495618_0001592 3300046514 Bacteria 15151
204 Ga0495628_0002585 3300046516 Bacteria 16279
205 Ga0495630_0003006 3300046517 Bacteria 11697
206 Ga0495630_0030232 3300046517 Bacteria 4028
207 Ga0495652_0000697 3300046529 Bacteria 39018
208 Ga0495652_0016732 3300046529 Bacteria 6553
209 Ga0495640_0004534 3300046533 Bacteria 11080
210 Ga0495586_0025487 3300046535 Bacteria 3165
211 Ga0495587_0000484 3300046536 Bacteria 27661
212 Ga0495587_0009368 3300046536 Bacteria 6277
213 Ga0495587_0030641 3300046536 Bacteria 3261
214 Ga0495645_0000221 3300046543 Bacteria 40987
215 Ga0495667_0063883 3300046559 Bacteria 2409
216 Ga0495656_0038945 3300046615 Bacteria 1972
217 Ga0495634_0015749 3300046642 Bacteria 5422
218 Ga0495634_0027225 3300046642 Bacteria 3978
219 Ga0495588_0052376 3300046674 Bacteria 2104
220 Ga0495657_0007398 3300046675 Bacteria 8487
221 Ga0495599_0006426 3300046678 Bacteria 7090
222 Ga0495623_0000041 3300046679 Bacteria 78481
223 Ga0495646_0000520 3300046680 Bacteria 20619
224 Ga0495646_0031197 3300046680 Bacteria 3323
225 Ga0495647_0056681 3300046681 Bacteria 1537
226 Ga0495613_0004349 3300046689 Bacteria 10604
227 Ga0495600_0081288 3300046809 Bacteria 2115
228 Ga0495581_0027070 3300047315 Bacteria 3325
229 Ga0495604_0000167 3300047317 Bacteria 57533
230 Ga0495604_0025614 3300047317 Bacteria 4698
231 Ga0495674_0049452 3300047319 Bacteria 3715
232 Ga0495674_0088676 3300047319 Bacteria 2645
233 Ga0495676_0135412 3300047321 Bacteria 1772
234 Ga0495675_0000264 3300047444 Bacteria 38010
235 Ga0495684_0005986 3300047471 Bacteria 9449
236 Ga0495602_0000147 3300048088 Bacteria 65372
237 Ga0496100_0053405 3300048903 Bacteria 2631
238 Ga0496101_0089349 3300048904 Bacteria 2289
239 Ga0496102_0004483 3300048905 Bacteria 11786
240 Ga0496104_0013652 3300048907 Bacteria 7323
241 Ga0496105_0002747 3300048908 Bacteria 12843
242 Ga0496105_0019022 3300048908 Bacteria 5534
243 Ga0496107_0028682 3300048910 Bacteria 3956
244 Ga0496107_0060044 3300048910 Bacteria 2752
245 Ga0496108_0050653 3300048911 Bacteria 3476
246 Ga0496109_0003648 3300048912 Bacteria 12867
247 Ga0496109_0178567 3300048912 Bacteria 1993
248 Ga0496109_0182804 3300048912 Bacteria 1969
249 Ga0496110_0021018 3300048913 Bacteria 5516
250 Ga0496110_0034331 3300048913 Bacteria 4394
251 Ga0496111_0019341 3300048914 Bacteria 4728
252 Ga0496111_0044014 3300048914 Bacteria 3209
253 Ga0496113_0006231 3300048916 Bacteria 7533
254 Ga0496114_0028202 3300048917 Bacteria 4605
255 Ga0496114_0074991 3300048917 Bacteria 2848
256 Ga0496114_0090815 3300048917 Bacteria 2593
257 Ga0501034_0013258 3300049571 Bacteria 8491
258 Ga0501069_0001943 3300049585 Bacteria 10320
259 Ga0501070_0004009 3300049586 Bacteria 12659
260 Ga0501070_0090370 3300049586 Bacteria 2534
261 Ga0501074_0019883 3300049590 Bacteria 4877
262 Ga0501074_0035732 3300049590 Bacteria 3600
263 Ga0501079_0033232 3300049741 Bacteria 3968
264 Ga0501080_0002432 3300049742 Bacteria 16266
265 Ga0501083_0003460 3300049744 Bacteria 11037
266 nmdc:mga05p37_40360_c1 3300050507 Bacteria 5731
267 nmdc:mga05p37_4211_c1 3300050507 Bacteria 16807
268 nmdc:mga09592_202034_c1 3300050508 Bacteria 1721
269 nmdc:mga06r32_227687_c1 3300050510 Bacteria 1852
270 nmdc:mga0n895_29800_c1 3300050512 Bacteria 5207
271 nmdc:mga08x19_14580_c1 3300050514 Bacteria 4769
272 nmdc:mga0a205_36076_c1 3300050515 Bacteria 4751
273 Ga0495601_0006111 3300053077 Bacteria 7029
274 Ga0495601_0059402 3300053077 Bacteria 2424
275 Ga0495612_0041717 3300053078 Bacteria 1872
276 Ga0495595_0022168 3300053084 Bacteria 2785
277 Ga0495619_0003797 3300053085 Bacteria 9715
278 Ga0495619_0028028 3300053085 Bacteria 3631
279 Ga0495619_0079236 3300053085 Bacteria 2209
280 Ga0466962_0001604 3300061719 Bacteria 10591
281 Ga0466962_0010195 3300061719 Bacteria 4513
282 Ga0081540_1007825
283 Ga0070658_10001851
284 Ga0070658_10005711
285 Ga0070658_10059693
286 Ga0070683_100028518
287 Ga0070683_100105714
288 Ga0070680_100172161
289 Ga0070660_100028685
290 Ga0070661_100006571
291 Ga0070709_10050580
292 Ga0070714_100032459
293 Ga0070714_100067139
294 Ga0070714_100123626
295 Ga0070713_100018007
296 Ga0070713_100098684
297 Ga0070710_10008143
298 Ga0070710_10008998
299 Ga0070711_100056877
300 Ga0070681_10039665
301 Ga0070681_10062050
302 Ga0070707_100000791
303 Ga0070698_100110954
304 Ga0070698_100169032
305 Ga0070679_100038203
306 Ga0070679_100064908
307 Ga0070679_100124885
308 Ga0070684_100023274
309 Ga0070695_100000081
310 Ga0070696_100140502
311 Ga0068856_100048829
312 Ga0068863_100132050
313 Ga0081455_10058557
314 Ga0070717_10007218
315 Ga0070717_10011959
316 Ga0070717_10018547
317 Ga0070717_10200749
318 Ga0070715_10000337
319 Ga0070716_100008088
320 Ga0075428_100007495
321 Ga0075431_100168652
322 Ga0075433_10004438
323 Ga0075434_100039931
324 Ga0075434_100220271
325 Ga0075429_100187581
326 Ga0075436_100001552
327 Ga0075435_100009972
328 Ga0105240_10005137
329 Ga0105240_10076716
330 Ga0114129_10000727
331 Ga0114129_10001349
332 Ga0105237_10049413
333 Ga0157370_10046779
334 Ga0157369_10012525
335 Ga0157369_10060098
336 Ga0182006_1023047
337 Ga0206356_11061657
338 Ga0206354_10916785
339 Ga0206354_11605825
340 Ga0206353_10503490
341 Ga0206353_10678990
342 Ga0206353_11508237
343 Ga0207692_10005256
344 Ga0207692_10012182
345 Ga0207685_10012105
346 Ga0207699_10017224
347 Ga0207707_10039400
348 Ga0207707_10119379
349 Ga0207695_10103455
350 Ga0207693_10002985
351 Ga0207693_10005999
352 Ga0207660_10022772
353 Ga0207657_10017811
354 Ga0207657_10021993
355 Ga0207657_10071745
356 Ga0207652_10005556
357 Ga0207652_10013742
358 Ga0207652_10050022
359 Ga0207646_10002005
360 Ga0207700_10053351
361 Ga0207664_10025681
362 Ga0207664_10041184
363 Ga0207664_10072199
364 Ga0207664_10113834
365 Ga0207664_10116129
366 Ga0207644_10063334
367 Ga0207690_10041653
368 Ga0207704_10093945
369 Ga0207665_10000148
370 Ga0207661_10040667
371 Ga0207641_10209282
372 Ga0265319_1001707
373 Ga0265319_1040222
374 Ga0265318_10000858
375 Ga0265323_10025206
376 Ga0265322_10018975
377 Ga0265338_10001956
378 Ga0265338_10003793
379 Ga0265338_10042852
380 Ga0265338_10055642
381 Ga0265330_10000745
382 Ga0265328_10010044
383 Ga0265320_10008102
384 Ga0265325_10000817
385 Ga0265325_10039798
386 Ga0265329_10007706
387 Ga0265340_10002260
388 Ga0265339_10007219
389 Ga0265339_10010366
390 Ga0265331_10010396
391 Ga0265327_10016750
392 Ga0265316_10005490
393 Ga0265316_10034681
394 Ga0265316_10057085
395 Ga0265313_10004865
396 Ga0265314_10022207
397 Ga0265314_10067819
398 Ga0265314_10079333
399 Ga0265342_10008008
400 Ga0373939_0021763
401 Ga0373933_0108543
402 Ga0373947_0081243
403 Ga0373937_0199439
404 Ga0395899_0026085
405 Ga0395899_0050298
406 Ga0395899_0110218
407 Ga0395900_0003522
408 Ga0395900_0008090
409 Ga0395900_0015585
410 Ga0395900_0017254
411 Ga0395900_0310465
412 Ga0395898_0001607
413 Ga0395898_0003184
414 Ga0395898_0026282
415 Ga0395898_0029166
416 Ga0395898_0039102
417 Ga0395905_0005743
418 Ga0395905_0011298
419 Ga0395905_0065265
420 Ga0395905_0093259
421 Ga0395905_0108221
422 Ga0395901_0000621
423 Ga0395901_0005093
424 Ga0395901_0029721
425 Ga0395901_0029821
426 Ga0395901_0038571
427 Ga0395901_0051771
428 Ga0395901_0056662
429 Ga0436360_0877568
430 Ga0466969_0001011
431 Ga0466966_0006780
432 Ga0466966_0011462
433 Ga0466961_0031686
434 Ga0466963_0000676
435 Ga0466963_0001948
436 Ga0466963_0005109
437 Ga0466963_0013251
438 Ga0466963_0014576
439 Ga0466963_0019291
440 Ga0466963_0030965
441 Ga0466963_0044483
442 Ga0466963_0062663
443 Ga0466963_0087160
444 Ga0466964_0003074
445 Ga0466964_0008749
446 Ga0466971_0018733
447 Ga0466971_0046750
448 Ga0466968_0002003
449 Ga0466968_0002921
450 Ga0466968_0009603
451 Ga0466970_0016544
452 Ga0466957_0013001
453 Ga0466957_0043175
454 Ga0466957_0072902
455 Ga0466960_0015821
456 Ga0466960_0017183
457 Ga0466959_0011355
458 Ga0466959_0015611
459 Ga0466959_0127845
460 Ga0466958_0003078
461 Ga0466958_0017635
462 Ga0466958_0032693
463 Ga0466958_0047478
464 Ga0466967_0003653
465 Ga0466967_0003851
466 Ga0466967_0008005
467 Ga0466967_0016015
468 Ga0466967_0027470
469 Ga0466967_0029590
470 Ga0466967_0078452
471 Ga0466967_0114038
472 Ga0466967_0115437
473 Ga0466967_0352121
474 Ga0495592_0000881
475 Ga0495592_0011657
476 Ga0495603_0051582
477 Ga0495629_0111432
478 Ga0495641_0056877
479 Ga0495651_0000295
480 Ga0495651_0067321
481 Ga0495653_0001972
482 Ga0495582_0009191
483 Ga0495664_0009483
484 Ga0495618_0001592
485 Ga0495628_0002585
486 Ga0495630_0003006
487 Ga0495630_0030232
488 Ga0495652_0000697
489 Ga0495652_0016732
490 Ga0495640_0004534
491 Ga0495586_0025487
492 Ga0495587_0000484
493 Ga0495587_0009368
494 Ga0495587_0030641
495 Ga0495645_0000221
496 Ga0495667_0063883
497 Ga0495656_0038945
498 Ga0495634_0015749
499 Ga0495634_0027225
500 Ga0495588_0052376
501 Ga0495657_0007398
502 Ga0495599_0006426
503 Ga0495623_0000041
504 Ga0495646_0000520
505 Ga0495646_0031197
506 Ga0495647_0056681
507 Ga0495613_0004349
508 Ga0495600_0081288
509 Ga0495581_0027070
510 Ga0495604_0000167
511 Ga0495604_0025614
512 Ga0495674_0049452
513 Ga0495674_0088676
514 Ga0495676_0135412
515 Ga0495675_0000264
516 Ga0495684_0005986
517 Ga0495602_0000147
518 Ga0496100_0053405
519 Ga0496101_0089349
520 Ga0496102_0004483
521 Ga0496104_0013652
522 Ga0496105_0002747
523 Ga0496105_0019022
524 Ga0496107_0028682
525 Ga0496107_0060044
526 Ga0496108_0050653
527 Ga0496109_0003648
528 Ga0496109_0178567
529 Ga0496109_0182804
530 Ga0496110_0021018
531 Ga0496110_0034331
532 Ga0496111_0019341
533 Ga0496111_0044014
534 Ga0496113_0006231
535 Ga0496114_0028202
536 Ga0496114_0074991
537 Ga0496114_0090815
538 Ga0501034_0013258
539 Ga0501069_0001943
540 Ga0501070_0004009
541 Ga0501070_0090370
542 Ga0501074_0019883
543 Ga0501074_0035732
544 Ga0501079_0033232
545 Ga0501080_0002432
546 Ga0501083_0003460
547 nmdc:mga05p37_40360_c1
548 nmdc:mga05p37_4211_c1
549 nmdc:mga09592_202034_c1
550 nmdc:mga06r32_227687_c1
551 nmdc:mga0n895_29800_c1
552 nmdc:mga08x19_14580_c1
553 nmdc:mga0a205_36076_c1
554 Ga0495601_0006111
555 Ga0495601_0059402
556 Ga0495612_0041717
557 Ga0495595_0022168
558 Ga0495619_0003797
559 Ga0495619_0028028
560 Ga0495619_0079236
561 Ga0466962_0001604
562 Ga0466962_0010195

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

330

454

0.97

PF08245

Mur_ligase_M

Mur ligase middle domain

128

308

0.9

PF01225

Mur_ligase

Mur ligase family, catalytic domain

44

116

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9088 1 457
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.9078 1 455
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9069 1 457
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.902 1 455
2xja-assembly1.cif.gz_A structure of mure from m.tuberculosis with dipeptide and adp 0.8882 1 456
ID Description Score Start End Superfamily
4c13A01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9424 1 95 3.40.1390.10
2am2A01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9334 20 79 3.40.1390.10
4qf5B01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9319 23 79 3.40.1390.10
2wtzA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9278 97 301 3.40.1190.10
1gg4B03 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9272 3 79 3.40.1390.10
ID Description Score Start End GO Terms
AF-A0A2V6AFD5-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9846 1 168 GO:0005524
GO:0009058
GO:0016881
AF-A0A7W0S1J1-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9791 1 252 GO:0005524
GO:0009058
GO:0016881
AF-A0A7X9GB38-F1-model_v4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9726 1 222 GO:0005524
GO:0009058
GO:0016881
AF-A0A537L4R5-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9713 1 145 GO:0005524
GO:0009058
GO:0016881
AF-A0A7X9BR18-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9708 1 213 GO:0005524
GO:0009058
GO:0016881

Map