F384146

General Info

Members Datasets Scaffolds Average Seq Length
281 156 562 280

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100024848|Ga0070698_1000248484
Length 299
Sequence LQVFKALAFISLVAALALGAAVSVEFVNSQRTRQSHADTRRFELGEELHFEAEFSRALLRKIDVADLKFRAARTPVSETSANASDSKTAKSYALTLSADVSSKGFFARLFNLKFRERVESVVEPVSFTVQKTTILDEQGKRVRTTESTFDRSKGLMTWTSRDPNNPDAEPRHAVADFNGQLQDVLSAIYFIRTQPLEVGKSFDIFIGDGGRVYTIPVKVVEKKRMKTILGRVDVFLVNPELFGPNRLIDDEKGEFSMWITADQHHIPVGGRVKTDYGTFDIKLKRIVHPSEPIAAAPGQ

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
114 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
115 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
126 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
127 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
128 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
129 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
130 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
133 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
134 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
135 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
136 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
137 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
138 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
139 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
142 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
143 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
144 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
145 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
146 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
147 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
148 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
149 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
150 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.14
Rhizosphere 97.51
Stem 0
Stem Tuber 0
Unclassified 26.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100024848 3300005471 Bacteria 6247
2 CNAas_1002001 3300000532 Unclassified 1545
3 JGI24751J29686_10000137 3300002459 Bacteria 36592
4 JGI25406J46586_10022130 3300003203 Unclassified 2539
5 rootL2_10051320 3300003322 Bacteria 3986
6 Ga0065714_10021448 3300005288 Bacteria 1513
7 Ga0065714_10064469 3300005288 Bacteria 61986
8 Ga0065704_10158555 3300005289 Bacteria 1372
9 Ga0065712_10000127 3300005290 Bacteria 117106
10 Ga0065712_10085778 3300005290 Bacteria 2674
11 Ga0065715_10037608 3300005293 Bacteria 1266
12 Ga0065715_10089915 3300005293 Bacteria 8144
13 Ga0065715_10092386 3300005293 Bacteria 5150
14 Ga0065715_10113787 3300005293 Bacteria 2475
15 Ga0065715_10178901 3300005293 Bacteria 1491
16 Ga0065707_10002223 3300005295 Bacteria 8045
17 Ga0070690_100285475 3300005330 Bacteria 1179
18 Ga0070670_100000799 3300005331 Bacteria 24545
19 Ga0070670_100057568 3300005331 Bacteria 3336
20 Ga0070670_100088878 3300005331 Bacteria 2656
21 Ga0070670_100247466 3300005331 Unclassified 1553
22 Ga0070682_100017354 3300005337 Bacteria 4195
23 Ga0070689_100000661 3300005340 Bacteria 20819
24 Ga0070669_100130142 3300005353 Bacteria 1930
25 Ga0070673_100154925 3300005364 Bacteria 1944
26 Ga0070659_100320715 3300005366 Unclassified 1295
27 Ga0070705_100329515 3300005440 Bacteria 1105
28 Ga0070700_100000155 3300005441 Bacteria 39898
29 Ga0070700_100035860 3300005441 Unclassified 3004
30 Ga0070700_100065777 3300005441 Bacteria 2300
31 Ga0070694_100008498 3300005444 Bacteria 6281
32 Ga0070694_100088701 3300005444 Unclassified 2166
33 Ga0070681_10075132 3300005458 Bacteria 3339
34 Ga0070681_10124389 3300005458 Unclassified 2512
35 Ga0068867_100250611 3300005459 Bacteria 1440
36 Ga0070706_100146144 3300005467 Unclassified 2208
37 Ga0070698_100081603 3300005471 Unclassified 3227
38 Ga0070699_100006718 3300005518 Bacteria 10004
39 Ga0070699_100037366 3300005518 Bacteria 4201
40 Ga0070699_100207697 3300005518 Bacteria 1742
41 Ga0070679_100081396 3300005530 Bacteria 3227
42 Ga0070697_100013522 3300005536 Bacteria 6401
43 Ga0070697_100143291 3300005536 Unclassified 2010
44 Ga0068853_100445337 3300005539 Bacteria 1218
45 Ga0070695_100132702 3300005545 Bacteria 1718
46 Ga0070696_100016910 3300005546 Bacteria 4920
47 Ga0070696_100149385 3300005546 Bacteria 1714
48 Ga0070696_100242581 3300005546 Unclassified 1360
49 Ga0070693_100012945 3300005547 Unclassified 4236
50 Ga0070693_100086322 3300005547 Unclassified 1882
51 Ga0070693_100175028 3300005547 Bacteria 1377
52 Ga0070693_100251227 3300005547 Unclassified 1172
53 Ga0070693_100259238 3300005547 Unclassified 1156
54 Ga0070704_100040029 3300005549 Bacteria 3223
55 Ga0070704_100043169 3300005549 Bacteria 3124
56 Ga0068857_100208106 3300005577 Bacteria 1784
57 Ga0068857_100397536 3300005577 Bacteria 1282
58 Ga0068857_100588827 3300005577 Unclassified 1051
59 Ga0070702_100022683 3300005615 Unclassified 3324
60 Ga0070702_100056912 3300005615 Bacteria 2260
61 Ga0070702_100059917 3300005615 Unclassified 2211
62 Ga0070702_100085910 3300005615 Bacteria 1896
63 Ga0068852_100335115 3300005616 Bacteria 1473
64 Ga0068852_100483991 3300005616 Bacteria 1230
65 Ga0068859_100007536 3300005617 Bacteria 11052
66 Ga0068859_100028817 3300005617 Bacteria 5568
67 Ga0068859_100115946 3300005617 Bacteria 2743
68 Ga0068859_100129656 3300005617 Bacteria 2593
69 Ga0068859_100310861 3300005617 Bacteria 1669
70 Ga0068859_100341148 3300005617 Unclassified 1592
71 Ga0068859_100475141 3300005617 Unclassified 1346
72 Ga0068859_100529240 3300005617 Bacteria 1273
73 Ga0068864_100033516 3300005618 Bacteria 4366
74 Ga0068864_100034667 3300005618 Bacteria 4294
75 Ga0068864_100262912 3300005618 Bacteria 1606
76 Ga0068864_100345899 3300005618 Bacteria 1402
77 Ga0068864_100421618 3300005618 Bacteria 1272
78 Ga0068861_100041806 3300005719 Bacteria 3434
79 Ga0068858_100042684 3300005842 Bacteria 4204
80 Ga0068858_100286339 3300005842 Bacteria 1570
81 Ga0068858_100365271 3300005842 Bacteria 1384
82 Ga0068860_100124999 3300005843 Bacteria 2465
83 Ga0068860_100134792 3300005843 Bacteria 2371
84 Ga0068862_100308131 3300005844 Unclassified 1459
85 Ga0081539_10001446 3300005985 Bacteria 40634
86 Ga0081539_10003677 3300005985 Bacteria 18372
87 Ga0081539_10068901 3300005985 Bacteria 1907
88 Ga0075432_10067029 3300006058 Unclassified 1285
89 Ga0070716_100152111 3300006173 Bacteria 1490
90 Ga0097621_100001283 3300006237 Bacteria 17273
91 Ga0075428_100516844 3300006844 Bacteria 1277
92 Ga0075430_100035122 3300006846 Unclassified 4255
93 Ga0075433_10015182 3300006852 Bacteria 6311
94 Ga0075433_10082739 3300006852 Bacteria 2831
95 Ga0075433_10228121 3300006852 Bacteria 1654
96 Ga0075434_100199337 3300006871 Bacteria 2021
97 Ga0075429_100286743 3300006880 Bacteria 1442
98 Ga0075436_100056438 3300006914 Bacteria 2712
99 Ga0097620_100007534 3300006931 Bacteria 11052
100 Ga0097620_100028815 3300006931 Bacteria 5568
101 Ga0097620_100115943 3300006931 Bacteria 2743
102 Ga0097620_100129662 3300006931 Bacteria 2593
103 Ga0097620_100310866 3300006931 Bacteria 1669
104 Ga0097620_100341144 3300006931 Unclassified 1592
105 Ga0097620_100475133 3300006931 Unclassified 1346
106 Ga0097620_100529240 3300006931 Bacteria 1273
107 Ga0105240_10252541 3300009093 Unclassified 2039
108 Ga0105240_10575561 3300009093 Bacteria 1243
109 Ga0111539_10000227 3300009094 Bacteria 67567
110 Ga0111539_10295780 3300009094 Bacteria 1884
111 Ga0105245_10387083 3300009098 Bacteria 1394
112 Ga0105247_10004883 3300009101 Bacteria 8531
113 Ga0105247_10016305 3300009101 Bacteria 4451
114 Ga0105247_10185013 3300009101 Unclassified 1392
115 Ga0105247_10259733 3300009101 Bacteria 1190
116 Ga0114129_10190061 3300009147 Unclassified 2789
117 Ga0114129_10422702 3300009147 Bacteria 1752
118 Ga0105243_10026082 3300009148 Bacteria 4472
119 Ga0105243_10658298 3300009148 Unclassified 1016
120 Ga0105241_10012547 3300009174 Bacteria 6214
121 Ga0105241_10057280 3300009174 Unclassified 2989
122 Ga0105241_10100690 3300009174 Bacteria 2297
123 Ga0105241_10212853 3300009174 Unclassified 1620
124 Ga0105241_10389286 3300009174 Bacteria 1220
125 Ga0105242_10054474 3300009176 Unclassified 3269
126 Ga0105248_10007166 3300009177 Bacteria 12233
127 Ga0105248_10155169 3300009177 Bacteria 2583
128 Ga0105248_10209940 3300009177 Bacteria 2194
129 Ga0105248_10241513 3300009177 Bacteria 2033
130 Ga0105248_10538486 3300009177 Bacteria 1317
131 Ga0105237_10051002 3300009545 Bacteria 4158
132 Ga0105237_10301603 3300009545 Unclassified 1605
133 Ga0105238_10040222 3300009551 Unclassified 4738
134 Ga0105238_10041216 3300009551 Bacteria 4677
135 Ga0105238_10189809 3300009551 Unclassified 2031
136 Ga0105249_10395428 3300009553 Bacteria 1411
137 Ga0105249_10739104 3300009553 Bacteria 1046
138 Ga0105246_10035387 3300011119 Bacteria 3337
139 Ga0105246_10041259 3300011119 Unclassified 3118
140 Ga0157373_10054809 3300013100 Bacteria 2832
141 Ga0157378_10389181 3300013297 Bacteria 1371
142 Ga0157375_10003843 3300013308 Bacteria 13030
143 Ga0163163_10011354 3300014325 Bacteria 8075
144 Ga0163163_10047112 3300014325 Unclassified 4236
145 Ga0163163_10078144 3300014325 Bacteria 3305
146 Ga0163163_10328288 3300014325 Bacteria 1584
147 Ga0163163_10522755 3300014325 Bacteria 1249
148 Ga0157379_10129166 3300014968 Bacteria 2274
149 Ga0157379_10218914 3300014968 Bacteria 1725
150 Ga0182005_1071826 3300015265 Unclassified 951
151 Ga0207710_10002887 3300025900 Bacteria 7812
152 Ga0207710_10170906 3300025900 Bacteria 1062
153 Ga0207647_10033721 3300025904 Bacteria 3275
154 Ga0207645_10385602 3300025907 Bacteria 941
155 Ga0207643_10018927 3300025908 Bacteria 3771
156 Ga0207643_10052908 3300025908 Bacteria 2306
157 Ga0207684_10000297 3300025910 Bacteria 71105
158 Ga0207654_10074012 3300025911 Unclassified 2032
159 Ga0207707_10010696 3300025912 Bacteria 7972
160 Ga0207671_10295663 3300025914 Bacteria 1279
161 Ga0207662_10337920 3300025918 Bacteria 1009
162 Ga0207652_10105387 3300025921 Bacteria 2495
163 Ga0207646_10017256 3300025922 Bacteria 6761
164 Ga0207694_10003913 3300025924 Bacteria 11764
165 Ga0207694_10031608 3300025924 Bacteria 4045
166 Ga0207650_10000041 3300025925 Bacteria 197115
167 Ga0207650_10035216 3300025925 Bacteria 3634
168 Ga0207650_10138967 3300025925 Unclassified 1908
169 Ga0207659_10377924 3300025926 Bacteria 1181
170 Ga0207690_10323508 3300025932 Bacteria 1213
171 Ga0207686_10019718 3300025934 Bacteria 3841
172 Ga0207670_10001325 3300025936 Bacteria 13073
173 Ga0207670_10074611 3300025936 Bacteria 2355
174 Ga0207711_10019979 3300025941 Bacteria 5582
175 Ga0207711_10135342 3300025941 Unclassified 2213
176 Ga0207711_10234473 3300025941 Unclassified 1681
177 Ga0207689_10182666 3300025942 Bacteria 1730
178 Ga0207689_10284374 3300025942 Unclassified 1369
179 Ga0207651_10095914 3300025960 Bacteria 2186
180 Ga0207651_10141927 3300025960 Unclassified 1857
181 Ga0207712_10004370 3300025961 Bacteria 8930
182 Ga0207640_10224400 3300025981 Unclassified 1441
183 Ga0207703_10184203 3300026035 Unclassified 1845
184 Ga0207703_10189512 3300026035 Bacteria 1820
185 Ga0207639_10204054 3300026041 Bacteria 1697
186 Ga0207708_10000188 3300026075 Bacteria 48769
187 Ga0207708_10019301 3300026075 Bacteria 5137
188 Ga0207708_10060012 3300026075 Unclassified 2904
189 Ga0207708_10161024 3300026075 Bacteria 1772
190 Ga0207641_10078037 3300026088 Unclassified 2868
191 Ga0207641_10111235 3300026088 Bacteria 2428
192 Ga0207641_10164345 3300026088 Bacteria 2020
193 Ga0207641_10371330 3300026088 Bacteria 1368
194 Ga0207648_10088587 3300026089 Unclassified 2702
195 Ga0207676_10010934 3300026095 Bacteria 6477
196 Ga0207676_10115625 3300026095 Bacteria 2253
197 Ga0207676_10260100 3300026095 Bacteria 1567
198 Ga0207676_10355991 3300026095 Bacteria 1355
199 Ga0207674_10026586 3300026116 Bacteria 6141
200 Ga0207674_10197125 3300026116 Bacteria 1963
201 Ga0207674_10307297 3300026116 Unclassified 1535
202 Ga0207674_10465189 3300026116 Bacteria 1222
203 Ga0207675_100054246 3300026118 Unclassified 3739
204 Ga0207675_100074189 3300026118 Unclassified 3183
205 Ga0207675_100518748 3300026118 Unclassified 1188
206 Ga0207428_10009386 3300027907 Bacteria 8776
207 Ga0207428_10109686 3300027907 Unclassified 2125
208 Ga0268265_10526844 3300028380 Bacteria 1118
209 Ga0268264_10093067 3300028381 Unclassified 2603
210 Ga0268264_10159374 3300028381 Bacteria 2031
211 Ga0268264_10193670 3300028381 Bacteria 1855
212 Ga0307408_100051357 3300031548 Bacteria 2970
213 Ga0307408_100167255 3300031548 Bacteria 1753
214 Ga0307413_10013732 3300031824 Bacteria 4086
215 Ga0307410_10014201 3300031852 Bacteria 4678
216 Ga0307406_10001268 3300031901 Bacteria 14135
217 Ga0307407_10034918 3300031903 Unclassified 2758
218 Ga0307412_10033391 3300031911 Bacteria 3271
219 Ga0307409_100331629 3300031995 Bacteria 1428
220 Ga0307414_10000958 3300032004 Bacteria 14697
221 Ga0307411_10007683 3300032005 Bacteria 5519
222 Ga0373951_0002230 3300035091 Unclassified 4923
223 Ga0373942_0019194 3300035207 Unclassified 1704
224 Ga0373961_0032376 3300035241 Bacteria 1466
225 Ga0395899_0199155 3300037312 Bacteria 1398
226 Ga0395900_0100341 3300037418 Bacteria 2974
227 Ga0395900_0341452 3300037418 Unclassified 1473
228 Ga0395898_0223545 3300037466 Bacteria 1796
229 Ga0395898_0283026 3300037466 Unclassified 1582
230 Ga0395901_0269304 3300038443 Bacteria 1772
231 Ga0395901_0369814 3300038443 Unclassified 1477
232 Ga0451576_0104887 3300045051 Unclassified 2941
233 Ga0496106_0060816 3300048909 Bacteria 2864
234 Ga0496108_0554607 3300048911 Unclassified 1002
235 Ga0496110_0480614 3300048913 Bacteria 1132
236 Ga0496112_0085328 3300048915 Bacteria 3124
237 Ga0496112_0276833 3300048915 Bacteria 1626
238 Ga0496112_0607487 3300048915 Bacteria 1025
239 Ga0501291_009174 3300049514 Bacteria 1382
240 Ga0501292_002986 3300049515 Bacteria 2226
241 Ga0501297_007148 3300049520 Unclassified 1205
242 Ga0501298_000914 3300049521 Bacteria 4189
243 Ga0501299_000576 3300049522 Unclassified 4391
244 Ga0501303_003534 3300049526 Bacteria 1259
245 Ga0501038_0001415 3300049574 Bacteria 21957
246 Ga0501201_005959 3300049651 Bacteria 1147
247 Ga0501202_002271 3300049652 Bacteria 3212
248 Ga0501207_001331 3300049654 Bacteria 3068
249 Ga0501207_020992 3300049654 Bacteria 1046
250 Ga0501217_002854 3300049661 Unclassified 3448
251 Ga0501217_016620 3300049661 Bacteria 1688
252 Ga0501217_019566 3300049661 Bacteria 1582
253 Ga0501223_005515 3300049663 Bacteria 2655
254 Ga0501223_010461 3300049663 Bacteria 1866
255 Ga0501224_004506 3300049664 Unclassified 1980
256 Ga0501227_006557 3300049665 Unclassified 2500
257 Ga0501227_011983 3300049665 Bacteria 1896
258 Ga0501230_009351 3300049667 Bacteria 1507
259 Ga0501235_002140 3300049669 Bacteria 4241
260 Ga0501236_025923 3300049670 Bacteria 899
261 Ga0501243_009863 3300049675 Bacteria 1486
262 Ga0501247_012386 3300049677 Bacteria 1037
263 Ga0501249_035256 3300049679 Bacteria 1124
264 Ga0501225_0007587 3300049705 Unclassified 3143
265 Ga0501245_003125 3300049708 Bacteria 2236
266 Ga0501268_007994 3300049765 Bacteria 1590
267 Ga0501283_000597 3300049779 Unclassified 4746
268 Ga0501283_011207 3300049779 Bacteria 1330
269 Ga0501212_013506 3300049851 Unclassified 1199
270 Ga0501212_024393 3300049851 Unclassified 951
271 Ga0501226_002590 3300049853 Bacteria 2196
272 Ga0501226_004279 3300049853 Bacteria 1657
273 nmdc:mga05p37_483515_c1 3300050507 Bacteria 1425
274 nmdc:mga05p37_741526_c1 3300050507 Bacteria 1084
275 nmdc:mga0qj67_78657_c1 3300050509 Unclassified 2640
276 nmdc:mga08y16_123595_c1 3300050511 Unclassified 2693
277 nmdc:mga08y16_30741_c1 3300050511 Bacteria 5648
278 nmdc:mga0n895_202969_c1 3300050512 Bacteria 2013
279 nmdc:mga0n895_614107_c1 3300050512 Bacteria 1089
280 nmdc:mga08x19_850_c1 3300050514 Bacteria 18151
281 nmdc:mga0a205_172964_c1 3300050515 Bacteria 2056
282 Ga0070698_100024848
283 CNAas_1002001
284 JGI24751J29686_10000137
285 JGI25406J46586_10022130
286 rootL2_10051320
287 Ga0065714_10021448
288 Ga0065714_10064469
289 Ga0065704_10158555
290 Ga0065712_10000127
291 Ga0065712_10085778
292 Ga0065715_10037608
293 Ga0065715_10089915
294 Ga0065715_10092386
295 Ga0065715_10113787
296 Ga0065715_10178901
297 Ga0065707_10002223
298 Ga0070690_100285475
299 Ga0070670_100000799
300 Ga0070670_100057568
301 Ga0070670_100088878
302 Ga0070670_100247466
303 Ga0070682_100017354
304 Ga0070689_100000661
305 Ga0070669_100130142
306 Ga0070673_100154925
307 Ga0070659_100320715
308 Ga0070705_100329515
309 Ga0070700_100000155
310 Ga0070700_100035860
311 Ga0070700_100065777
312 Ga0070694_100008498
313 Ga0070694_100088701
314 Ga0070681_10075132
315 Ga0070681_10124389
316 Ga0068867_100250611
317 Ga0070706_100146144
318 Ga0070698_100081603
319 Ga0070699_100006718
320 Ga0070699_100037366
321 Ga0070699_100207697
322 Ga0070679_100081396
323 Ga0070697_100013522
324 Ga0070697_100143291
325 Ga0068853_100445337
326 Ga0070695_100132702
327 Ga0070696_100016910
328 Ga0070696_100149385
329 Ga0070696_100242581
330 Ga0070693_100012945
331 Ga0070693_100086322
332 Ga0070693_100175028
333 Ga0070693_100251227
334 Ga0070693_100259238
335 Ga0070704_100040029
336 Ga0070704_100043169
337 Ga0068857_100208106
338 Ga0068857_100397536
339 Ga0068857_100588827
340 Ga0070702_100022683
341 Ga0070702_100056912
342 Ga0070702_100059917
343 Ga0070702_100085910
344 Ga0068852_100335115
345 Ga0068852_100483991
346 Ga0068859_100007536
347 Ga0068859_100028817
348 Ga0068859_100115946
349 Ga0068859_100129656
350 Ga0068859_100310861
351 Ga0068859_100341148
352 Ga0068859_100475141
353 Ga0068859_100529240
354 Ga0068864_100033516
355 Ga0068864_100034667
356 Ga0068864_100262912
357 Ga0068864_100345899
358 Ga0068864_100421618
359 Ga0068861_100041806
360 Ga0068858_100042684
361 Ga0068858_100286339
362 Ga0068858_100365271
363 Ga0068860_100124999
364 Ga0068860_100134792
365 Ga0068862_100308131
366 Ga0081539_10001446
367 Ga0081539_10003677
368 Ga0081539_10068901
369 Ga0075432_10067029
370 Ga0070716_100152111
371 Ga0097621_100001283
372 Ga0075428_100516844
373 Ga0075430_100035122
374 Ga0075433_10015182
375 Ga0075433_10082739
376 Ga0075433_10228121
377 Ga0075434_100199337
378 Ga0075429_100286743
379 Ga0075436_100056438
380 Ga0097620_100007534
381 Ga0097620_100028815
382 Ga0097620_100115943
383 Ga0097620_100129662
384 Ga0097620_100310866
385 Ga0097620_100341144
386 Ga0097620_100475133
387 Ga0097620_100529240
388 Ga0105240_10252541
389 Ga0105240_10575561
390 Ga0111539_10000227
391 Ga0111539_10295780
392 Ga0105245_10387083
393 Ga0105247_10004883
394 Ga0105247_10016305
395 Ga0105247_10185013
396 Ga0105247_10259733
397 Ga0114129_10190061
398 Ga0114129_10422702
399 Ga0105243_10026082
400 Ga0105243_10658298
401 Ga0105241_10012547
402 Ga0105241_10057280
403 Ga0105241_10100690
404 Ga0105241_10212853
405 Ga0105241_10389286
406 Ga0105242_10054474
407 Ga0105248_10007166
408 Ga0105248_10155169
409 Ga0105248_10209940
410 Ga0105248_10241513
411 Ga0105248_10538486
412 Ga0105237_10051002
413 Ga0105237_10301603
414 Ga0105238_10040222
415 Ga0105238_10041216
416 Ga0105238_10189809
417 Ga0105249_10395428
418 Ga0105249_10739104
419 Ga0105246_10035387
420 Ga0105246_10041259
421 Ga0157373_10054809
422 Ga0157378_10389181
423 Ga0157375_10003843
424 Ga0163163_10011354
425 Ga0163163_10047112
426 Ga0163163_10078144
427 Ga0163163_10328288
428 Ga0163163_10522755
429 Ga0157379_10129166
430 Ga0157379_10218914
431 Ga0182005_1071826
432 Ga0207710_10002887
433 Ga0207710_10170906
434 Ga0207647_10033721
435 Ga0207645_10385602
436 Ga0207643_10018927
437 Ga0207643_10052908
438 Ga0207684_10000297
439 Ga0207654_10074012
440 Ga0207707_10010696
441 Ga0207671_10295663
442 Ga0207662_10337920
443 Ga0207652_10105387
444 Ga0207646_10017256
445 Ga0207694_10003913
446 Ga0207694_10031608
447 Ga0207650_10000041
448 Ga0207650_10035216
449 Ga0207650_10138967
450 Ga0207659_10377924
451 Ga0207690_10323508
452 Ga0207686_10019718
453 Ga0207670_10001325
454 Ga0207670_10074611
455 Ga0207711_10019979
456 Ga0207711_10135342
457 Ga0207711_10234473
458 Ga0207689_10182666
459 Ga0207689_10284374
460 Ga0207651_10095914
461 Ga0207651_10141927
462 Ga0207712_10004370
463 Ga0207640_10224400
464 Ga0207703_10184203
465 Ga0207703_10189512
466 Ga0207639_10204054
467 Ga0207708_10000188
468 Ga0207708_10019301
469 Ga0207708_10060012
470 Ga0207708_10161024
471 Ga0207641_10078037
472 Ga0207641_10111235
473 Ga0207641_10164345
474 Ga0207641_10371330
475 Ga0207648_10088587
476 Ga0207676_10010934
477 Ga0207676_10115625
478 Ga0207676_10260100
479 Ga0207676_10355991
480 Ga0207674_10026586
481 Ga0207674_10197125
482 Ga0207674_10307297
483 Ga0207674_10465189
484 Ga0207675_100054246
485 Ga0207675_100074189
486 Ga0207675_100518748
487 Ga0207428_10009386
488 Ga0207428_10109686
489 Ga0268265_10526844
490 Ga0268264_10093067
491 Ga0268264_10159374
492 Ga0268264_10193670
493 Ga0307408_100051357
494 Ga0307408_100167255
495 Ga0307413_10013732
496 Ga0307410_10014201
497 Ga0307406_10001268
498 Ga0307407_10034918
499 Ga0307412_10033391
500 Ga0307409_100331629
501 Ga0307414_10000958
502 Ga0307411_10007683
503 Ga0373951_0002230
504 Ga0373942_0019194
505 Ga0373961_0032376
506 Ga0395899_0199155
507 Ga0395900_0100341
508 Ga0395900_0341452
509 Ga0395898_0223545
510 Ga0395898_0283026
511 Ga0395901_0269304
512 Ga0395901_0369814
513 Ga0451576_0104887
514 Ga0496106_0060816
515 Ga0496108_0554607
516 Ga0496110_0480614
517 Ga0496112_0085328
518 Ga0496112_0276833
519 Ga0496112_0607487
520 Ga0501291_009174
521 Ga0501292_002986
522 Ga0501297_007148
523 Ga0501298_000914
524 Ga0501299_000576
525 Ga0501303_003534
526 Ga0501038_0001415
527 Ga0501201_005959
528 Ga0501202_002271
529 Ga0501207_001331
530 Ga0501207_020992
531 Ga0501217_002854
532 Ga0501217_016620
533 Ga0501217_019566
534 Ga0501223_005515
535 Ga0501223_010461
536 Ga0501224_004506
537 Ga0501227_006557
538 Ga0501227_011983
539 Ga0501230_009351
540 Ga0501235_002140
541 Ga0501236_025923
542 Ga0501243_009863
543 Ga0501247_012386
544 Ga0501249_035256
545 Ga0501225_0007587
546 Ga0501245_003125
547 Ga0501268_007994
548 Ga0501283_000597
549 Ga0501283_011207
550 Ga0501212_013506
551 Ga0501212_024393
552 Ga0501226_002590
553 Ga0501226_004279
554 nmdc:mga05p37_483515_c1
555 nmdc:mga05p37_741526_c1
556 nmdc:mga0qj67_78657_c1
557 nmdc:mga08y16_123595_c1
558 nmdc:mga08y16_30741_c1
559 nmdc:mga0n895_202969_c1
560 nmdc:mga0n895_614107_c1
561 nmdc:mga08x19_850_c1
562 nmdc:mga0a205_172964_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11306

DUF3108

Protein of unknown function (DUF3108)

13

286

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
7yfz-assembly1.cif.gz_l cyanophage pam3 baseplate proteins 0.5395 123 196
6ntr-assembly4.cif.gz_D crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.5248 36 281
6ntr-assembly2.cif.gz_B crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.5222 37 281
6ntr-assembly4.cif.gz_D crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.5177 36 281
6ntr-assembly2.cif.gz_B crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.5145 37 281
ID Description Score Start End Superfamily
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7463 107 131 3.30.420.10
4g2sB00 Mainly Beta;Sandwich;Tumour Suppressor Smad4; 0.6637 128 170 2.60.200.20
af_Q9U231_54_175_3.40.50.2060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Sec1/Munc18 (SM) protein, domain 1 0.5385 126 190 3.40.50.2060
1lqmF00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;Bacteriophage PBS2, uracil-glycosylase inhibitor 0.5321 210 277 3.10.450.20
af_Q9U232_1_175_3.40.50.2060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Sec1/Munc18 (SM) protein, domain 1 0.523 117 188 3.40.50.2060
ID Description Score Start End GO Terms
AF-A0A3B9MIY3-F1-model_v4 DUF3108 domain-containing protein 0.9243 189 285
AF-A0A3B9MIY3-F1-model_v4 DUF3108 domain-containing protein 0.8718 189 285
AF-A0A2V8R258-F1-model_v4 DUF3108 domain-containing protein 0.7843 150 286
AF-A0A2H5VNM2-F1-model_v4 DUF3108 domain-containing protein 0.7809 37 285
AF-A0A2V8RL61-F1-model_v4 DUF3108 domain-containing protein 0.7758 37 285

Map