F384054

General Info

Members Datasets Scaffolds Average Seq Length
281 192 195 584

Family's Representative Sequence

Representative Sequence 3300003791|Ga0055530_10005854|Ga0055530_100058543
Length 624
Sequence MLYRQLFHCWHELAHLRAMSLRQVVLSWGLIGVARKNRMAVEAGASELVKVVALLGAAVVMVPLFRRLGLGSVLGYFAAGLAIGPFGFGWFSDPQAILHTAELGVVMFLFVIGLEMRPSHLWSLRREIFGLGTLQIVVCGAVLTGVCMLFGFPLPVAFIGAAGFVLTSTAVVMQLLAERGDIALPSGQKIVSILLFEDLLIVPLLAVVAFMAPVQADAGASSRWISVAIAAGAIIGLVLVGRFLLNPLFRILAAAKARSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLSVGMALDLTVVANNWPLIVSGVLALMLAKAVCIYTVARILGSDHRQALDRGVVMAQGGEFAFVLFSAAAAAGVIGIDVNANLTAIVVLSMALTPLFVLLHDTLMPAREVSLEGVDTAEGMSGSVLMIGFGRFGQVASQSLLARDVDVTIIDDDVDMIHNAERFGFKIYYGDGTRLDVLHASGAATARAIAVCVNNAQDADRIVELVAHEFPQAKLLVRSFDREHSLRLIHAGVDFQIRETFESALMFGQAALVELGADEDDARDIAEQIRERDAERFELEMAGGDLRAGAHMVFGSALPGVPTPTPFTAPKRKARTLNADEVPEEEE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
4 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
5 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
6 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
7 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
8 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
9 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
10 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
11 2643221582 Rhizobium sp. Root651 Isolate Unclassified
12 2643221607 Rhizobium sp. Root73 Isolate Unclassified
13 2643221629 Devosia sp. Root105 Isolate Unclassified
14 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
15 2643221662 Devosia sp. Root413D1 Isolate Unclassified
16 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
17 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
18 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
19 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
20 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
21 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
22 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
23 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
24 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
25 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
26 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
27 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
28 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
29 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
30 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
31 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
32 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
33 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
34 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
35 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
36 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
37 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
38 2851182111 Bosea sp. Tri-44 Isolate Nodule
39 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
40 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
41 2854911287 Brucella lupini LUP21 Isolate Unclassified
42 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
43 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
44 2857558681 Duganella sp. R-74565 Isolate Unclassified
45 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
46 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
47 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
48 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
49 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
50 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
51 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
52 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
53 2919506607 Acinetobacter sp. 3657 Isolate Unclassified
54 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
55 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
56 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
57 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
58 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
59 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
60 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
61 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
62 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
63 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
64 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
65 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
66 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
67 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
68 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
69 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
70 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
71 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
72 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
73 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
74 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
75 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
76 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
77 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
78 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
79 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
80 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
81 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
82 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
83 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
84 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
85 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
86 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
87 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
88 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
89 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
90 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
91 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
92 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
93 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
94 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
95 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
96 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
97 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
98 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
99 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
100 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
101 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
102 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
103 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
104 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
105 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
106 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
107 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
108 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
109 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
110 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
111 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
112 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
113 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
114 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
115 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
116 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
117 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
118 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
120 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
121 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
122 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
123 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
124 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
126 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
127 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
128 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
137 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
138 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
139 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
140 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
141 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
142 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
143 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
144 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
145 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
146 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
147 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
148 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
149 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
150 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
151 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
152 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
153 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
154 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
155 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
156 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
157 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
158 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
159 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
160 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
161 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
164 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
167 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
170 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
171 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
172 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
173 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
174 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
181 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
182 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
183 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
184 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
187 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
188 8004592986 Serratia sp. S119 Isolate Unclassified
189 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
190 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
191 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
192 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 69.4
Metatranscriptomes 0.36
Isolates 30.25

Biome Distribution

Category Percentage (%)
Aerial Root 0.71
Bulb 0
Endosphere 19.57
Nodule 7.47
Rhizoplane 2.14
Rhizosphere 35.59
Stem 0
Stem Tuber 0
Unclassified 34.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_916733 2162886007 Bacteria 4098
2 JGI25152J39213_1000036 3300002773 Bacteria 93679
3 JGI25152J39213_1000836 3300002773 Bacteria 15283
4 JGI25150J39212_1000574 3300002774 Bacteria 14646
5 JGI25150J39212_1009167 3300002774 Bacteria 1901
6 JGI25151J46595_10000133 3300003187 Bacteria 99030
7 JGI25153J46596_10000058 3300003215 Bacteria 132614
8 JGI25153J46596_10008420 3300003215 Bacteria 4930
9 rootH2_10027838 3300003320 Bacteria 10519
10 Ga0006562J51391_1032467 3300003578 Bacteria 2850
11 Ga0055526_1001879 3300003771 Bacteria 14549
12 Ga0055537_1000528 3300003773 Bacteria 22258
13 Ga0055536_1002988 3300003781 Bacteria 9264
14 Ga0055536_1003001 3300003781 Bacteria 9240
15 Ga0055536_1008062 3300003781 Bacteria 4599
16 Ga0055534_1000258 3300003784 Bacteria 36880
17 Ga0055528_1000065 3300003790 Bacteria 85294
18 Ga0055530_10005854 3300003791 Bacteria 5689
19 Ga0055530_10006640 3300003791 Bacteria 5107
20 Ga0055540_1000877 3300003792 Bacteria 19947
21 Ga0058692_1000001 3300003856 Bacteria 834230
22 Ga0058692_1000023 3300003856 Bacteria 237263
23 Ga0058692_1000031 3300003856 Bacteria 188488
24 Ga0065703_1000146 3300005272 Bacteria 26902
25 Ga0065704_10000509 3300005289 Bacteria 25144
26 Ga0065704_10071021 3300005289 Bacteria 13701
27 Ga0065704_10071332 3300005289 Bacteria 11682
28 Ga0065704_10079624 3300005289 Bacteria 4114
29 Ga0070670_100014563 3300005331 Bacteria 6753
30 Ga0070665_100085860 3300005548 Bacteria 3153
31 Ga0075365_10012316 3300006038 Bacteria 5073
32 Ga0075364_10000145 3300006051 Bacteria 31120
33 Ga0075364_10000241 3300006051 Bacteria 26213
34 Ga0099826_10000010 3300006948 Bacteria 314346
35 Ga0105251_10000450 3300009011 Bacteria 39635
36 Ga0105251_10000713 3300009011 Bacteria 30624
37 Ga0105244_10056656 3300009036 Bacteria 1983
38 Ga0105244_10056786 3300009036 Bacteria 1980
39 Ga0105240_10196411 3300009093 Bacteria 2368
40 Ga0111539_10000897 3300009094 Bacteria 38847
41 Ga0105247_10000152 3300009101 Bacteria 67648
42 Ga0105243_10000010 3300009148 Bacteria 316672
43 Ga0105243_10000053 3300009148 Bacteria 137373
44 Ga0105243_10001889 3300009148 Bacteria 17862
45 Ga0157373_10001498 3300013100 Bacteria 17811
46 Ga0157373_10055965 3300013100 Bacteria 2801
47 Ga0157371_10003680 3300013102 Bacteria 13763
48 Ga0157370_10007222 3300013104 Bacteria 12124
49 Ga0157369_10079101 3300013105 Bacteria 3522
50 Ga0157372_10160314 3300013307 Bacteria 2600
51 Ga0182008_10001932 3300014497 Bacteria 13367
52 Ga0182008_10016800 3300014497 Bacteria 3796
53 Ga0182006_1005215 3300015261 Bacteria 6228
54 Ga0182007_10001075 3300015262 Bacteria 14873
55 Ga0182005_1001036 3300015265 Bacteria 11761
56 Ga0163161_10001056 3300017792 Bacteria 20894
57 Ga0163161_10004538 3300017792 Bacteria 9664
58 Ga0163161_10061333 3300017792 Bacteria 2737
59 Ga0228710_1012388 3300022740 Bacteria 10589
60 Ga0209147_100281 3300025229 Bacteria 43878
61 Ga0207425_1000011 3300025245 Bacteria 550735
62 Ga0207425_1000415 3300025245 Bacteria 28739
63 Ga0209129_1000031 3300025258 Bacteria 383039
64 Ga0209129_1000337 3300025258 Bacteria 40559
65 Ga0209565_1000014 3300025263 Bacteria 530302
66 Ga0209673_1000065 3300025273 Bacteria 252799
67 Ga0209675_1000011 3300025291 Bacteria 520597
68 Ga0209676_1000011 3300025292 Bacteria 860463
69 Ga0209676_1000170 3300025292 Bacteria 154647
70 Ga0209676_1000324 3300025292 Bacteria 92019
71 Ga0209676_1000565 3300025292 Bacteria 55881
72 Ga0209676_1003924 3300025292 Bacteria 8625
73 Ga0209025_1000012 3300025294 Bacteria 924362
74 Ga0209025_1000529 3300025294 Bacteria 72736
75 Ga0209025_1006802 3300025294 Bacteria 8746
76 Ga0209564_1000775 3300025295 Bacteria 44355
77 Ga0209758_1000143 3300025297 Bacteria 171093
78 Ga0209050_1005035 3300025298 Bacteria 8564
79 Ga0209050_1007533 3300025298 Bacteria 6071
80 Ga0209051_1000868 3300025303 Bacteria 30598
81 Ga0209051_1010369 3300025303 Bacteria 4717
82 Ga0209257_1000014 3300025304 Bacteria 946850
83 Ga0209257_1000170 3300025304 Bacteria 169384
84 Ga0209257_1000793 3300025304 Bacteria 46093
85 Ga0209257_1013184 3300025304 Bacteria 3712
86 Ga0207655_1000877 3300025728 Bacteria 31857
87 Ga0207655_1001304 3300025728 Bacteria 23591
88 Ga0207713_1002305 3300025735 Bacteria 14030
89 Ga0207713_1004836 3300025735 Bacteria 8639
90 Ga0207710_10000005 3300025900 Bacteria 607066
91 Ga0207650_10013800 3300025925 Bacteria 5602
92 Ga0207709_10000001 3300025935 Bacteria 2228154
93 Ga0207709_10000354 3300025935 Bacteria 46826
94 Ga0209371_1000004 3300027312 Bacteria 1098197
95 Ga0209371_1000008 3300027312 Bacteria 1024606
96 Ga0209371_1000059 3300027312 Bacteria 237154
97 Ga0209371_1001295 3300027312 Bacteria 17563
98 Ga0209282_1000009 3300027666 Bacteria 233366
99 Ga0207428_10078417 3300027907 Bacteria 2584
100 Ga0268256_1000005 3300030500 Bacteria 1082342
101 Ga0268256_1000009 3300030500 Bacteria 1022625
102 Ga0268256_1000028 3300030500 Bacteria 433179
103 Ga0268256_1000055 3300030500 Bacteria 237299
104 Ga0307513_10004310 3300031456 Bacteria 19017
105 Ga0307412_10037139 3300031911 Bacteria 3127
106 Ga0307416_100093155 3300032002 Bacteria 2594
107 Ga0307414_10002139 3300032004 Bacteria 10313
108 Ga0307414_10002678 3300032004 Bacteria 9361
109 Ga0237819_00108 3300038705 Bacteria 30577
110 Ga0237816_00865 3300039145 Bacteria 2498
111 Ga0451797_0054106 3300041453 Bacteria 4298
112 Ga0451807_0207496 3300041486 Bacteria 3684
113 Ga0451851_0527109 3300041507 Bacteria 2375
114 Ga0451853_1554842 3300041512 Bacteria 10570
115 Ga0439463_000649 3300042016 Bacteria 9623
116 Ga0439440_0002112 3300042993 Bacteria 3714
117 Ga0495638_0014388 3300046460 Bacteria 5349
118 Ga0495638_0016687 3300046460 Bacteria 4912
119 Ga0495638_0033242 3300046460 Bacteria 3299
120 Ga0495606_0007289 3300046507 Bacteria 9966
121 Ga0495610_0011945 3300046512 Bacteria 5266
122 Ga0495632_0000006 3300046519 Bacteria 345883
123 Ga0495643_0004256 3300046522 Bacteria 10104
124 Ga0495663_0000847 3300046525 Bacteria 10410
125 Ga0495663_0011636 3300046525 Bacteria 2448
126 Ga0495633_0007559 3300046558 Bacteria 6236
127 Ga0495671_0024129 3300046692 Bacteria 3171
128 Ga0495672_0004224 3300047320 Bacteria 11878
129 Ga0495681_0009164 3300047470 Bacteria 6124
130 Ga0496113_0062335 3300048916 Bacteria 2816
131 Ga0496116_0013569 3300048919 Bacteria 6556
132 Ga0496116_0015185 3300048919 Bacteria 6100
133 Ga0496117_0005460 3300048920 Bacteria 13337
134 Ga0496117_0007698 3300048920 Bacteria 10428
135 Ga0496117_0029573 3300048920 Bacteria 4221
136 Ga0496117_0033539 3300048920 Bacteria 3880
137 Ga0496118_0007909 3300048921 Bacteria 11133
138 Ga0496118_0008906 3300048921 Bacteria 10254
139 Ga0496118_0012068 3300048921 Bacteria 8341
140 Ga0496118_0016617 3300048921 Bacteria 6743
141 Ga0496119_0000759 3300048922 Bacteria 43300
142 Ga0496119_0004165 3300048922 Bacteria 14526
143 Ga0496119_0005837 3300048922 Bacteria 11634
144 Ga0496120_0000139 3300048923 Bacteria 120489
145 Ga0496120_0000161 3300048923 Bacteria 112351
146 Ga0496120_0004656 3300048923 Bacteria 11339
147 Ga0496121_0000240 3300048924 Bacteria 117890
148 Ga0496121_0021493 3300048924 Bacteria 6317
149 Ga0496121_0048523 3300048924 Bacteria 3611
150 Ga0496122_0004925 3300048925 Bacteria 16187
151 Ga0496122_0009316 3300048925 Bacteria 10376
152 Ga0496122_0011323 3300048925 Bacteria 9053
153 Ga0496122_0013799 3300048925 Bacteria 7870
154 Ga0496122_0021566 3300048925 Bacteria 5760
155 Ga0496122_0080305 3300048925 Bacteria 2275
156 Ga0496122_0083644 3300048925 Bacteria 2211
157 Ga0496123_0000234 3300048926 Bacteria 112524
158 Ga0496123_0007287 3300048926 Bacteria 10495
159 Ga0496123_0018504 3300048926 Bacteria 5538
160 Ga0496123_0034131 3300048926 Bacteria 3649
161 Ga0496123_0044611 3300048926 Bacteria 3030
162 Ga0496123_0067851 3300048926 Bacteria 2250
163 Ga0496124_0000100 3300048927 Bacteria 181404
164 Ga0496124_0000123 3300048927 Bacteria 161106
165 Ga0496124_0000312 3300048927 Bacteria 89996
166 Ga0496124_0005295 3300048927 Bacteria 14586
167 Ga0496124_0007326 3300048927 Bacteria 11757
168 Ga0496124_0029245 3300048927 Bacteria 4913
169 Ga0496124_0030710 3300048927 Bacteria 4764
170 Ga0496124_0172618 3300048927 Bacteria 1672
171 Ga0496125_0000650 3300048928 Bacteria 58031
172 Ga0496125_0002926 3300048928 Bacteria 21491
173 Ga0496125_0022224 3300048928 Bacteria 5895
174 Ga0496125_0035539 3300048928 Bacteria 4368
175 Ga0496125_0044336 3300048928 Bacteria 3763
176 Ga0496126_0010455 3300048929 Bacteria 9720
177 Ga0496126_0036369 3300048929 Bacteria 4605
178 Ga0496126_0047154 3300048929 Bacteria 3945
179 Ga0501031_0017172 3300049568 Bacteria 4702
180 Ga0501034_0000321 3300049571 Bacteria 84273
181 Ga0501036_0034780 3300049572 Bacteria 4263
182 Ga0501238_000159 3300049671 Bacteria 10482
183 Ga0501035_0000215 3300049822 Bacteria 69564
184 Ga0501035_0035580 3300049822 Bacteria 4518
185 Ga0501044_0052086 3300049823 Bacteria 4219
186 nmdc:mga00v17_141_c1 3300050491 Bacteria 41598
187 nmdc:mga00v17_627_c1 3300050491 Bacteria 19523
188 nmdc:mga00v17_69598_c1 3300050491 Bacteria 2178
189 nmdc:mga0yw44_8617_c1 3300050492 Bacteria 5092
190 nmdc:mga08y16_7608_c1 3300050511 Bacteria 11338
191 Ga0500556_0000056 3300053104 Bacteria 115367
192 Ga0500593_000134 3300053117 Bacteria 29394
193 Ga0500568_0000005 3300053139 Bacteria 614296
194 Ga0500622_0001799 3300053156 Bacteria 16353
195 Ga0500634_0000067 3300053161 Bacteria 43218

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048927 Ga0496124_0172618 Ga0496124_0172618_57_1661 511
2 3300047470 Ga0495681_0009164 Ga0495681_0009164_1044_2717 524
3 3300005289 Ga0065704_10071332 Ga0065704_100713327 541
4 3300006948 Ga0099826_10000010 Ga0099826_10000010122 542
5 3300009011 Ga0105251_10000713 Ga0105251_1000071325 542
6 3300025735 Ga0207713_1004836 Ga0207713_10048367 542
7 3300027666 Ga0209282_1000009 Ga0209282_1000009121 542
8 3300048927 Ga0496124_0000123 Ga0496124_0000123_118742_120514 544
9 3300050491 nmdc:mga00v17_69598_c1 nmdc:mga00v17_69598_c1_368_2146 547
10 3300005289 Ga0065704_10071021 Ga0065704_100710218 548
11 3300042016 Ga0439463_000649 Ga0439463_000649_3630_5384 548
12 3300042993 Ga0439440_0002112 Ga0439440_0002112_1163_2917 548
13 3300053139 Ga0500568_0000005 Ga0500568_0000005_266517_268331 548
14 iso_pu_bacteria 2585428058 2587732310 548
15 iso_pu_bacteria 2643221699 2644549174 550
16 3300048926 Ga0496123_0067851 Ga0496123_0067851_61_1908 551
17 iso_pu_bacteria 2851182111 2851185471 551
18 iso_pu_bacteria 2643221582 2643918459 552
19 iso_pu_bacteria 2840764183 2840768611 552
20 3300009094 Ga0111539_10000897 Ga0111539_1000089720 553
21 3300027907 Ga0207428_10078417 Ga0207428_100784172 553
22 3300050511 nmdc:mga08y16_7608_c1 nmdc:mga08y16_7608_c1_7313_9118 553
23 iso_pu_bacteria 2758568016 2758642684 553
24 3300003578 Ga0006562J51391_1032467 Ga0006562J51391_10324672 554
25 3300031456 Ga0307513_10004310 Ga0307513_100043105 555
26 3300046525 Ga0495663_0000847 Ga0495663_0000847_6525_8372 555
27 3300046692 Ga0495671_0024129 Ga0495671_0024129_1130_2977 555
28 iso_pu_bacteria 2852653556 2852653730 555
29 3300048922 Ga0496119_0000759 Ga0496119_0000759_3795_5549 556
30 3300048923 Ga0496120_0000139 Ga0496120_0000139_23705_25459 556
31 3300048927 Ga0496124_0000100 Ga0496124_0000100_151592_153346 556
32 3300048924 Ga0496121_0000240 Ga0496121_0000240_20154_21914 557
33 3300048925 Ga0496122_0080305 Ga0496122_0080305_320_2149 557
34 iso_pu_bacteria 2643221607 2644047951 557
35 iso_pu_bacteria 2643221686 2644485106 557
36 3300002773 JGI25152J39213_1000836 JGI25152J39213_100083615 558
37 3300002774 JGI25150J39212_1009167 JGI25150J39212_10091671 558
38 3300003215 JGI25153J46596_10008420 JGI25153J46596_100084205 558
39 3300025245 Ga0207425_1000415 Ga0207425_100041517 558
40 3300025258 Ga0209129_1000337 Ga0209129_100033715 558
41 3300025294 Ga0209025_1006802 Ga0209025_10068027 558
42 3300041507 Ga0451851_0527109 Ga0451851_0527109_487_2250 558
43 3300041512 Ga0451853_1554842 Ga0451853_1554842_8079_9842 558
44 3300048921 Ga0496118_0016617 Ga0496118_0016617_3156_4919 558
45 3300048924 Ga0496121_0048523 Ga0496121_0048523_1038_2900 558
46 3300048925 Ga0496122_0011323 Ga0496122_0011323_4023_5786 558
47 3300048928 Ga0496125_0002926 Ga0496125_0002926_17612_19375 558
48 3300053156 Ga0500622_0001799 Ga0500622_0001799_10385_12148 558
49 iso_pu_bacteria 2597489887 2597858703 558
50 iso_pu_bacteria 2599185257 2599805816 558
51 iso_pu_bacteria 2643221636 2644203296 558
52 iso_pu_bacteria 2671180172 2671773119 558
53 iso_pu_bacteria 2838661181 2838667396 558
54 iso_pu_bacteria 3005416602 3005416693 558
55 iso_pu_bacteria 8004592986 8004593947 558
56 iso_pu_bacteria 8005314921 8005320664 558
57 iso_pu_bacteria 2513237138 2513867272 559
58 iso_pu_bacteria 2599185236 2599717774 559
59 iso_pu_bacteria 2721755755 2723846070 559
60 iso_pu_bacteria 2765235942 2766064685 559
61 iso_pu_bacteria 2842922631 2842927361 559
62 iso_pu_bacteria 2857516855 2857522787 559
63 iso_pu_bacteria 2919100787 2919102231 559
64 iso_pu_bacteria 2923556063 2923561570 559
65 iso_pu_bacteria 2933586486 2933589642 559
66 iso_pu_bacteria 2960617483 2960618622 559
67 iso_pu_bacteria 8024479707 8024485340 559
68 iso_pu_bacteria 8054563764 8054565836 559
69 iso_pu_bacteria 2904541872 2904543544 560
70 iso_pu_bacteria 2929160207 2929162921 560
71 iso_pu_bacteria 2945909444 2945911401 560
72 iso_pu_bacteria 2945984333 2945986302 560
73 3300046558 Ga0495633_0007559 Ga0495633_0007559_2086_3918 561
74 3300049671 Ga0501238_000159 Ga0501238_000159_6540_8294 561
75 iso_pu_bacteria 2921208531 2921208708 561
76 iso_pu_bacteria 2937119839 2937124605 561
77 iso_pu_bacteria 2957415311 2957419044 561
78 iso_pu_bacteria 2960610863 2960614656 561
79 iso_pu_bacteria 2977523885 2977524976 561
80 3300025294 Ga0209025_1000529 Ga0209025_100052956 562
81 3300027312 Ga0209371_1001295 Ga0209371_10012956 562
82 3300030500 Ga0268256_1000028 Ga0268256_1000028395 562
83 iso_pu_bacteria 2513237098 2513678904 562
84 iso_pu_bacteria 2802428860 2802734013 562
85 iso_pu_bacteria 2964636051 2964640259 562
86 3300003781 Ga0055536_1002988 Ga0055536_10029883 563
87 3300003781 Ga0055536_1003001 Ga0055536_10030014 563
88 3300003792 Ga0055540_1000877 Ga0055540_10008772 563
89 3300006051 Ga0075364_10000241 Ga0075364_1000024124 563
90 3300009148 Ga0105243_10001889 Ga0105243_1000188917 563
91 3300025292 Ga0209676_1000565 Ga0209676_100056531 563
92 3300025303 Ga0209051_1000868 Ga0209051_100086814 563
93 3300025304 Ga0209257_1013184 Ga0209257_10131842 563
94 3300025935 Ga0207709_10000354 Ga0207709_1000035446 563
95 3300050491 nmdc:mga00v17_141_c1 nmdc:mga00v17_141_c1_212_1975 563
96 iso_pu_bacteria 2821123053 2821130344 563
97 iso_pu_bacteria 2869551831 2869555193 563
98 iso_pu_bacteria 2929199973 2929202908 563
99 iso_pu_bacteria 8055909800 8055912003 563
100 3300003856 Ga0058692_1000031 Ga0058692_10000312 564
101 3300013104 Ga0157370_10007222 Ga0157370_100072228 564
102 3300014497 Ga0182008_10016800 Ga0182008_100168002 564
103 3300027312 Ga0209371_1000004 Ga0209371_1000004175 564
104 3300030500 Ga0268256_1000005 Ga0268256_1000005869 564
105 3300031911 Ga0307412_10037139 Ga0307412_100371392 564
106 3300032002 Ga0307416_100093155 Ga0307416_1000931552 564
107 3300046525 Ga0495663_0011636 Ga0495663_0011636_37_1866 564
108 3300048926 Ga0496123_0044611 Ga0496123_0044611_675_2468 564
109 3300048928 Ga0496125_0000650 Ga0496125_0000650_22358_24151 564
110 3300048929 Ga0496126_0047154 Ga0496126_0047154_900_2693 564
111 iso_pu_bacteria 2857558681 2857560679 564
112 iso_pu_bacteria 2857542790 2857547184 565
113 3300003781 Ga0055536_1008062 Ga0055536_10080625 566
114 3300022740 Ga0228710_1012388 Ga0228710_10123882 566
115 3300025292 Ga0209676_1000170 Ga0209676_100017093 566
116 3300053161 Ga0500634_0000067 Ga0500634_0000067_31240_33066 566
117 iso_pu_bacteria 2721755755 2723844929 566
118 3300053104 Ga0500556_0000056 Ga0500556_0000056_56274_58049 567
119 iso_pu_bacteria 2903768456 2903770689 567
120 3300038705 Ga0237819_00108 Ga0237819_00108_9992_11842 568
121 3300025229 Ga0209147_100281 Ga0209147_10028120 569
122 3300046519 Ga0495632_0000006 Ga0495632_0000006_113514_115298 569
123 3300009148 Ga0105243_10000053 Ga0105243_1000005344 570
124 3300025935 Ga0207709_10000001 Ga0207709_100000011625 570
125 3300049571 Ga0501034_0000321 Ga0501034_0000321_51440_53281 570
126 iso_pu_bacteria 2643221665 2644363006 570
127 iso_pu_bacteria 2854911287 2854915887 570
128 iso_pu_bacteria 2919506607 2919507168 570
129 3300032004 Ga0307414_10002139 Ga0307414_100021394 573
130 3300049568 Ga0501031_0017172 Ga0501031_0017172_1185_3011 573
131 3300049572 Ga0501036_0034780 Ga0501036_0034780_2157_3983 573
132 3300049822 Ga0501035_0000215 Ga0501035_0000215_58427_60280 573
133 3300049822 Ga0501035_0035580 Ga0501035_0035580_1462_3288 573
134 3300049823 Ga0501044_0052086 Ga0501044_0052086_1797_3623 573
135 3300005289 Ga0065704_10000509 Ga0065704_1000050921 575
136 iso_pu_bacteria 2643221629 2644166979 575
137 iso_pu_bacteria 2643221662 2644349491 575
138 3300041453 Ga0451797_0054106 Ga0451797_0054106_2392_4197 577
139 3300041486 Ga0451807_0207496 Ga0451807_0207496_889_2694 577
140 3300053117 Ga0500593_000134 Ga0500593_000134_17322_19139 577
141 3300046460 Ga0495638_0033242 Ga0495638_0033242_1256_3073 578
142 3300025292 Ga0209676_1000324 Ga0209676_100032478 579
143 iso_pu_bacteria 2639762793 2640734915 580
144 iso_pu_bacteria 2675903507 2678231822 580
145 iso_pu_bacteria 2773857770 2774436771 580
146 3300003856 Ga0058692_1000001 Ga0058692_1000001402 581
147 3300005272 Ga0065703_1000146 Ga0065703_10001463 581
148 3300009036 Ga0105244_10056786 Ga0105244_100567861 581
149 3300009101 Ga0105247_10000152 Ga0105247_1000015264 581
150 3300017792 Ga0163161_10001056 Ga0163161_1000105617 581
151 3300025728 Ga0207655_1000877 Ga0207655_100087710 581
152 3300025900 Ga0207710_10000005 Ga0207710_10000005499 581
153 3300027312 Ga0209371_1000008 Ga0209371_1000008528 581
154 3300030500 Ga0268256_1000009 Ga0268256_1000009528 581
155 iso_pu_bacteria 2773857761 2774389538 581
156 iso_pu_bacteria 2919182534 2919183019 581
157 3300009036 Ga0105244_10056656 Ga0105244_100566561 582
158 3300009148 Ga0105243_10000010 Ga0105243_10000010169 582
159 3300017792 Ga0163161_10004538 Ga0163161_100045388 582
160 3300025728 Ga0207655_1001304 Ga0207655_10013048 582
161 3300025935 Ga0207709_10000001 Ga0207709_10000001426 582
162 iso_pu_bacteria 2842757796 2842758337 582
163 iso_pu_bacteria 2919506607 2919507946 582
164 3300013100 Ga0157373_10001498 Ga0157373_100014983 583
165 3300013307 Ga0157372_10160314 Ga0157372_101603141 583
166 iso_pu_bacteria 2547132130 2547502821 583
167 iso_pu_bacteria 2551306352 2552748373 583
168 iso_pu_bacteria 2816332141 2816516824 583
169 iso_pu_bacteria 2842391507 2842393243 583
170 iso_pu_bacteria 2919134579 2919137982 583
171 iso_pu_bacteria 2939589442 2939590838 583
172 iso_pu_bacteria 2961064222 2961065165 583
173 iso_pu_bacteria 2974307012 2974309134 583
174 iso_pu_bacteria 2977247770 2977249851 583
175 iso_pu_bacteria 2984514374 2984515658 583
176 3300003791 Ga0055530_10006640 Ga0055530_100066402 584
177 3300005548 Ga0070665_100085860 Ga0070665_1000858603 584
178 3300009093 Ga0105240_10196411 Ga0105240_101964112 584
179 3300013102 Ga0157371_10003680 Ga0157371_1000368011 584
180 3300014497 Ga0182008_10001932 Ga0182008_100019329 584
181 3300015261 Ga0182006_1005215 Ga0182006_10052152 584
182 3300015262 Ga0182007_10001075 Ga0182007_1000107511 584
183 3300015265 Ga0182005_1001036 Ga0182005_10010369 584
184 3300017792 Ga0163161_10061333 Ga0163161_100613331 584
185 3300025298 Ga0209050_1007533 Ga0209050_10075333 584
186 3300046460 Ga0495638_0014388 Ga0495638_0014388_1676_3502 584
187 3300048916 Ga0496113_0062335 Ga0496113_0062335_700_2526 584
188 3300048919 Ga0496116_0013569 Ga0496116_0013569_1434_3260 584
189 3300048920 Ga0496117_0005460 Ga0496117_0005460_7698_9524 584
190 3300048920 Ga0496117_0029573 Ga0496117_0029573_1843_3669 584
191 3300048920 Ga0496117_0033539 Ga0496117_0033539_390_2216 584
192 3300048921 Ga0496118_0007909 Ga0496118_0007909_7709_9535 584
193 3300048921 Ga0496118_0012068 Ga0496118_0012068_6153_7979 584
194 3300048924 Ga0496121_0021493 Ga0496121_0021493_1230_3056 584
195 3300048925 Ga0496122_0021566 Ga0496122_0021566_1069_2895 584
196 3300048925 Ga0496122_0083644 Ga0496122_0083644_278_2104 584
197 3300048926 Ga0496123_0034131 Ga0496123_0034131_1111_2937 584
198 3300048927 Ga0496124_0029245 Ga0496124_0029245_1501_3327 584
199 3300048927 Ga0496124_0030710 Ga0496124_0030710_1975_3801 584
200 3300048928 Ga0496125_0022224 Ga0496125_0022224_1274_3100 584
201 3300048928 Ga0496125_0044336 Ga0496125_0044336_1678_3504 584
202 3300048929 Ga0496126_0010455 Ga0496126_0010455_7864_9690 584
203 iso_pu_bacteria 2747842428 2747948269 584
204 iso_pu_bacteria 2765235840 2765578765 584
205 iso_pu_bacteria 2874220319 2874221394 584
206 iso_pu_bacteria 2919089067 2919091900 584
207 iso_pu_bacteria 2928496128 2928496363 584
208 iso_pu_bacteria 2931380184 2931380966 584
209 iso_pu_bacteria 2937610967 2937612203 584
210 iso_pu_bacteria 2939626828 2939629802 584
211 iso_pu_bacteria 2961047084 2961048160 584
212 3300003771 Ga0055526_1001879 Ga0055526_10018795 585
213 3300003773 Ga0055537_1000528 Ga0055537_10005282 585
214 3300003784 Ga0055534_1000258 Ga0055534_100025816 585
215 3300003790 Ga0055528_1000065 Ga0055528_100006551 585
216 3300003791 Ga0055530_10005854 Ga0055530_100058543 585
217 3300025263 Ga0209565_1000014 Ga0209565_100001427 585
218 3300025273 Ga0209673_1000065 Ga0209673_1000065164 585
219 3300025291 Ga0209675_1000011 Ga0209675_1000011307 585
220 3300025292 Ga0209676_1000011 Ga0209676_1000011728 585
221 3300025292 Ga0209676_1003924 Ga0209676_10039244 585
222 3300025295 Ga0209564_1000775 Ga0209564_100077535 585
223 3300025298 Ga0209050_1005035 Ga0209050_10050353 585
224 3300025303 Ga0209051_1010369 Ga0209051_10103692 585
225 3300025304 Ga0209257_1000014 Ga0209257_1000014787 585
226 3300046460 Ga0495638_0016687 Ga0495638_0016687_1436_3262 585
227 3300046512 Ga0495610_0011945 Ga0495610_0011945_1488_3317 585
228 3300046522 Ga0495643_0004256 Ga0495643_0004256_2830_4656 585
229 3300047320 Ga0495672_0004224 Ga0495672_0004224_6815_8641 585
230 3300048922 Ga0496119_0005837 Ga0496119_0005837_5973_7799 585
231 3300048923 Ga0496120_0004656 Ga0496120_0004656_1631_3457 585
232 3300048927 Ga0496124_0007326 Ga0496124_0007326_2043_3872 585
233 iso_pu_bacteria 2842780639 2842783919 585
234 iso_pu_bacteria 2984568884 2984571680 585
235 iso_pu_bacteria 2987605356 2987606049 585
236 3300013100 Ga0157373_10055965 Ga0157373_100559652 586
237 3300025304 Ga0209257_1000793 Ga0209257_100079329 586
238 3300048921 Ga0496118_0008906 Ga0496118_0008906_1672_3501 586
239 3300048925 Ga0496122_0013799 Ga0496122_0013799_4096_5922 586
240 3300048926 Ga0496123_0018504 Ga0496123_0018504_2238_4064 586
241 3300003320 rootH2_10027838 rootH2_1002783811 587
242 3300006038 Ga0075365_10012316 Ga0075365_100123165 587
243 3300050492 nmdc:mga0yw44_8617_c1 nmdc:mga0yw44_8617_c1_2567_4396 587
244 3300013105 Ga0157369_10079101 Ga0157369_100791013 588
245 3300048919 Ga0496116_0015185 Ga0496116_0015185_1996_3831 588
246 3300006051 Ga0075364_10000145 Ga0075364_100001452 589
247 3300039145 Ga0237816_00865 Ga0237816_00865_195_2033 589
248 3300048925 Ga0496122_0009316 Ga0496122_0009316_1553_3391 589
249 3300048926 Ga0496123_0007287 Ga0496123_0007287_1637_3475 589
250 3300048927 Ga0496124_0000312 Ga0496124_0000312_23216_25051 589
251 3300050491 nmdc:mga00v17_627_c1 nmdc:mga00v17_627_c1_9145_10986 589
252 iso_pu_bacteria 2744054655 2745162493 589
253 3300002773 JGI25152J39213_1000036 JGI25152J39213_100003632 590
254 3300002774 JGI25150J39212_1000574 JGI25150J39212_10005748 590
255 3300003187 JGI25151J46595_10000133 JGI25151J46595_1000013385 590
256 3300003215 JGI25153J46596_10000058 JGI25153J46596_1000005884 590
257 3300025245 Ga0207425_1000011 Ga0207425_1000011424 590
258 3300025258 Ga0209129_1000031 Ga0209129_1000031238 590
259 3300025294 Ga0209025_1000012 Ga0209025_1000012738 590
260 3300025297 Ga0209758_1000143 Ga0209758_100014368 590
261 3300032004 Ga0307414_10002678 Ga0307414_100026786 590
262 3300046507 Ga0495606_0007289 Ga0495606_0007289_4658_6499 591
263 iso_pu_bacteria 2852684882 2852685869 591
264 3300048928 Ga0496125_0035539 Ga0496125_0035539_1504_3357 592
265 3300025304 Ga0209257_1000170 Ga0209257_1000170126 593
266 2162886007 SwRhRL2b_contig_916733 SwRhRL2b_0929.00001610 595
267 3300003856 Ga0058692_1000023 Ga0058692_100002354 595
268 3300005289 Ga0065704_10079624 Ga0065704_100796241 595
269 3300005331 Ga0070670_100014563 Ga0070670_1000145634 595
270 3300009011 Ga0105251_10000450 Ga0105251_1000045030 595
271 3300025735 Ga0207713_1002305 Ga0207713_10023055 595
272 3300025925 Ga0207650_10013800 Ga0207650_100138003 595
273 3300027312 Ga0209371_1000059 Ga0209371_100005954 595
274 3300030500 Ga0268256_1000055 Ga0268256_1000055144 595
275 3300048920 Ga0496117_0007698 Ga0496117_0007698_5581_7431 595
276 3300048922 Ga0496119_0004165 Ga0496119_0004165_2791_4641 595
277 3300048923 Ga0496120_0000161 Ga0496120_0000161_2883_4733 595
278 3300048925 Ga0496122_0004925 Ga0496122_0004925_2723_4573 595
279 3300048926 Ga0496123_0000234 Ga0496123_0000234_2857_4707 595
280 3300048927 Ga0496124_0005295 Ga0496124_0005295_9876_11729 595
281 3300048929 Ga0496126_0036369 Ga0496126_0036369_2712_4562 595

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00999

Na_H_Exchanger

Sodium/hydrogen exchanger family

251

396

0.94

PF02254

TrkA_N

TrkA-N domain

421

536

0.94

PF00999

Na_H_Exchanger

Sodium/hydrogen exchanger family

52

259

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eyw-assembly1.cif.gz_A crystal structure of the c-terminal domain of e. coli kefc in complex with keff 0.9677 385 544
3l9w-assembly1.cif.gz_A kefc c-terminal domain in complex with keff and gsh 0.9651 382 545
3l9x-assembly1.cif.gz_B kefc c-terminal domain in complex with keff and esg 0.9506 385 539
5nc8-assembly1.cif.gz_A shewanella denitrificans kef ctd in amp bound form 0.9371 385 544
3l9w-assembly1.cif.gz_B kefc c-terminal domain in complex with keff and gsh 0.9321 382 553
ID Description Score Start End Superfamily
3l9wA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9733 382 539 3.40.50.720
af_A0A1D6JIA9_976_1140_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9487 381 543 3.40.50.720
af_Q57604_107_240_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9431 382 512 3.40.50.720
af_P45522_400_562_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9394 382 539 3.40.50.720
3l9wA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9384 382 539 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A529PZQ1-F1-model_v4 Potassium transporter 0.9448 384 497 GO:0005886
GO:0006813
GO:0015297
AF-A0A3S4FTR7-F1-model_v4 K(+)/H(+) antiporter 0.9393 451 544 GO:0005886
GO:0006813
GO:0015297
AF-A0A4Q3R8Z7-F1-model_v4 deleted 0.9373 5 172
AF-A0A529PZQ1-F1-model_v4 Potassium transporter 0.9368 384 497 GO:0005886
GO:0006813
GO:0015297
AF-A0A097SS97-F1-model_v4 Trk system potassium uptake protein TrkA 0.9222 385 515 GO:0006813
GO:0008324

Feature Viewer

pLDDT pTM Quality
75.57 0.59 Medium
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Predicted Structure (AlphaFold2)

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