F383661

General Info

Members Datasets Scaffolds Average Seq Length
280 165 558 384

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10195922|Ga0105239_101959221
Length 440
Sequence LGFGDWLAASVVKVSATTAAQRASGLTLESRGAMDVPVRMIPVLWTSGDGFEPANIRTVSIPPLTNLSEDERLLFDSVLEFARREIAPRVREMDEQAKFPKDLLPKLFNLGVMGIEVPESLGGGGATFFHSVLAVEALARVDASVAVLVDVQNTLVINAVTRWGSDDIKARLLPKLAGGTVGAYALSEAGSGSDAFALQTRAAESGDGFTLTGRKLWITNADEADLFIVFATVNPEAGYRGITAFIVERGSPGFSVGKKEDKLGIRASSTCELLLEQCHVSRANVLGDVGKGYKVAIETLNEGRIGIGAQMLGIAQAALDHAIRYTKERKQFGKAVAEFQGVQFELARAAIEVEAVRLLVYNAARLRDAGRPFLTEAAMCKLHGSEVAERVASLAVNLFGGYGFVKDYPVEKLYRDAKIGQIYEGTTNLQLQTIAKALLA

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
126 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
162 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.79
Nodule 0
Rhizoplane 4.29
Rhizosphere 93.57
Stem 0
Stem Tuber 0
Unclassified 0.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10195922 3300010375 Bacteria 2263
2 Ga0065712_10005766 3300005290 Bacteria 3861
3 Ga0065712_10073352 3300005290 Bacteria 4420
4 Ga0065715_10002023 3300005293 Bacteria 7113
5 Ga0065715_10180111 3300005293 Bacteria 1483
6 Ga0065707_10136693 3300005295 Bacteria 1827
7 Ga0070676_10018405 3300005328 Bacteria 3871
8 Ga0070683_100052197 3300005329 Bacteria 3788
9 Ga0070683_100126690 3300005329 Bacteria 2414
10 Ga0070670_100002927 3300005331 Bacteria 14132
11 Ga0070670_100025513 3300005331 Bacteria 5085
12 Ga0068868_100055468 3300005338 Bacteria 3126
13 Ga0070689_100036400 3300005340 Bacteria 3765
14 Ga0070692_10011303 3300005345 Bacteria 4093
15 Ga0070692_10012666 3300005345 Bacteria 3912
16 Ga0070669_100015005 3300005353 Bacteria 5523
17 Ga0070675_100008329 3300005354 Bacteria 8043
18 Ga0070673_100234467 3300005364 Bacteria 1593
19 Ga0070673_100234853 3300005364 Bacteria 1592
20 Ga0070688_100003073 3300005365 Bacteria 8527
21 Ga0070688_100031266 3300005365 Bacteria 3202
22 Ga0070701_10077160 3300005438 Bacteria 1795
23 Ga0070705_100013728 3300005440 Bacteria 4148
24 Ga0070705_100018498 3300005440 Bacteria 3653
25 Ga0070705_100062140 3300005440 Bacteria 2222
26 Ga0070705_100063959 3300005440 Bacteria 2196
27 Ga0070700_100026682 3300005441 Bacteria 3415
28 Ga0070700_100124455 3300005441 Bacteria 1732
29 Ga0070694_100003855 3300005444 Bacteria 8959
30 Ga0070694_100021344 3300005444 Bacteria 4136
31 Ga0070694_100044472 3300005444 Bacteria 2972
32 Ga0070708_100000527 3300005445 Bacteria 28842
33 Ga0070708_100041003 3300005445 Bacteria 4057
34 Ga0070708_100074869 3300005445 Bacteria 3055
35 Ga0070662_100039269 3300005457 Bacteria 3367
36 Ga0068867_100017371 3300005459 Bacteria 5111
37 Ga0070706_100004853 3300005467 Bacteria 12881
38 Ga0070707_100032854 3300005468 Bacteria 4944
39 Ga0070707_100033444 3300005468 Bacteria 4903
40 Ga0070698_100000182 3300005471 Bacteria 59279
41 Ga0070698_100001361 3300005471 Bacteria 27195
42 Ga0070698_100152470 3300005471 Bacteria 2258
43 Ga0070698_100301172 3300005471 Bacteria 1534
44 Ga0070699_100009699 3300005518 Bacteria 8335
45 Ga0070699_100016886 3300005518 Bacteria 6267
46 Ga0070697_100002841 3300005536 Bacteria 13321
47 Ga0070697_100024657 3300005536 Bacteria 4790
48 Ga0070672_100224333 3300005543 Bacteria 1577
49 Ga0070686_100097281 3300005544 Bacteria 1981
50 Ga0070695_100001559 3300005545 Bacteria 12796
51 Ga0070696_100001278 3300005546 Bacteria 16388
52 Ga0070693_100108646 3300005547 Bacteria 1702
53 Ga0070665_100022753 3300005548 Bacteria 6310
54 Ga0070704_100000509 3300005549 Bacteria 18516
55 Ga0070704_100003039 3300005549 Bacteria 9549
56 Ga0068857_100037064 3300005577 Bacteria 4319
57 Ga0068859_100012967 3300005617 Bacteria 8374
58 Ga0068859_100013604 3300005617 Bacteria 8158
59 Ga0068859_100045815 3300005617 Bacteria 4393
60 Ga0068864_100025563 3300005618 Bacteria 4975
61 Ga0068864_100026197 3300005618 Bacteria 4916
62 Ga0068864_100098028 3300005618 Bacteria 2596
63 Ga0068864_100121558 3300005618 Bacteria 2335
64 Ga0068861_100017374 3300005719 Bacteria 5105
65 Ga0068870_10002396 3300005840 Bacteria 7802
66 Ga0068858_100102853 3300005842 Bacteria 2665
67 Ga0068860_100046034 3300005843 Bacteria 4160
68 Ga0068862_100000518 3300005844 Bacteria 40803
69 Ga0068862_100047798 3300005844 Bacteria 3652
70 Ga0068862_100082861 3300005844 Bacteria 2785
71 Ga0081455_10001512 3300005937 Bacteria 28688
72 Ga0081455_10041560 3300005937 Bacteria 4041
73 Ga0081539_10001414 3300005985 Bacteria 41289
74 Ga0081539_10037628 3300005985 Bacteria 2879
75 Ga0075364_10053395 3300006051 Bacteria 2642
76 Ga0075366_10007663 3300006195 Bacteria 5974
77 Ga0097621_100120675 3300006237 Bacteria 2223
78 Ga0097621_100131038 3300006237 Bacteria 2135
79 Ga0075428_100000794 3300006844 Bacteria 32944
80 Ga0075428_100006756 3300006844 Bacteria 12762
81 Ga0075428_100041787 3300006844 Bacteria 5041
82 Ga0075428_100105190 3300006844 Bacteria 3078
83 Ga0075430_100004636 3300006846 Bacteria 11566
84 Ga0075430_100013624 3300006846 Bacteria 6931
85 Ga0075430_100020008 3300006846 Bacteria 5697
86 Ga0075431_100002375 3300006847 Bacteria 18097
87 Ga0075431_100019404 3300006847 Bacteria 6931
88 Ga0075431_100065224 3300006847 Bacteria 3760
89 Ga0075431_100092917 3300006847 Bacteria 3114
90 Ga0075431_100220422 3300006847 Unclassified 1935
91 Ga0075433_10036969 3300006852 Bacteria 4209
92 Ga0075433_10055843 3300006852 Bacteria 3448
93 Ga0075434_100013449 3300006871 Bacteria 7791
94 Ga0075429_100012512 3300006880 Bacteria 7361
95 Ga0075429_100051842 3300006880 Bacteria 3569
96 Ga0068865_100003607 3300006881 Bacteria 9305
97 Ga0097620_100012967 3300006931 Bacteria 8374
98 Ga0097620_100013604 3300006931 Bacteria 8158
99 Ga0097620_100045815 3300006931 Bacteria 4393
100 Ga0075435_100194003 3300007076 Bacteria 1720
101 Ga0111539_10000043 3300009094 Bacteria 128570
102 Ga0111539_10010107 3300009094 Bacteria 11894
103 Ga0111539_10031527 3300009094 Bacteria 6438
104 Ga0111539_10070097 3300009094 Bacteria 4138
105 Ga0111539_10304049 3300009094 Bacteria 1856
106 Ga0111539_10396403 3300009094 Bacteria 1607
107 Ga0105247_10018517 3300009101 Bacteria 4177
108 Ga0114129_10007031 3300009147 Bacteria 16020
109 Ga0114129_10034569 3300009147 Bacteria 7141
110 Ga0114129_10094050 3300009147 Bacteria 4152
111 Ga0105243_10020184 3300009148 Bacteria 5053
112 Ga0105243_10027281 3300009148 Bacteria 4374
113 Ga0105242_10112197 3300009176 Bacteria 2326
114 Ga0105242_10124820 3300009176 Bacteria 2214
115 Ga0105248_10288314 3300009177 Bacteria 1848
116 Ga0105238_10016104 3300009551 Bacteria 7562
117 Ga0105249_10068585 3300009553 Bacteria 3271
118 Ga0105249_10236656 3300009553 Bacteria 1803
119 Ga0157374_10029878 3300013296 Bacteria 4943
120 Ga0157374_10287440 3300013296 Bacteria 1624
121 Ga0163162_10017552 3300013306 Bacteria 7003
122 Ga0163162_10020312 3300013306 Bacteria 6524
123 Ga0157375_10076800 3300013308 Bacteria 3368
124 Ga0157375_10348945 3300013308 Bacteria 1646
125 Ga0163163_10000206 3300014325 Bacteria 60942
126 Ga0163163_10039515 3300014325 Bacteria 4605
127 Ga0163163_10049913 3300014325 Bacteria 4119
128 Ga0163163_10425673 3300014325 Bacteria 1387
129 Ga0157380_10020387 3300014326 Bacteria 4955
130 Ga0157380_10034968 3300014326 Bacteria 3878
131 Ga0157380_10148834 3300014326 Bacteria 2021
132 Ga0157377_10009781 3300014745 Bacteria 4722
133 Ga0207697_10001054 3300025315 Bacteria 15227
134 Ga0207710_10024332 3300025900 Bacteria 2607
135 Ga0207688_10001126 3300025901 Bacteria 13748
136 Ga0207645_10018604 3300025907 Bacteria 4565
137 Ga0207643_10001891 3300025908 Bacteria 11572
138 Ga0207643_10067235 3300025908 Bacteria 2056
139 Ga0207684_10001275 3300025910 Bacteria 27799
140 Ga0207662_10105410 3300025918 Bacteria 1752
141 Ga0207646_10002760 3300025922 Bacteria 20509
142 Ga0207646_10055000 3300025922 Bacteria 3559
143 Ga0207646_10168265 3300025922 Bacteria 1979
144 Ga0207681_10010345 3300025923 Bacteria 5709
145 Ga0207681_10029424 3300025923 Bacteria 3567
146 Ga0207694_10014652 3300025924 Bacteria 5911
147 Ga0207659_10006740 3300025926 Bacteria 7056
148 Ga0207659_10065644 3300025926 Bacteria 2631
149 Ga0207659_10080252 3300025926 Bacteria 2410
150 Ga0207644_10009117 3300025931 Bacteria 6506
151 Ga0207644_10046993 3300025931 Bacteria 3078
152 Ga0207706_10042803 3300025933 Bacteria 4013
153 Ga0207706_10088001 3300025933 Bacteria 2731
154 Ga0207686_10090102 3300025934 Bacteria 2023
155 Ga0207709_10015927 3300025935 Bacteria 4173
156 Ga0207670_10005463 3300025936 Bacteria 6977
157 Ga0207670_10006933 3300025936 Bacteria 6305
158 Ga0207704_10031028 3300025938 Bacteria 3004
159 Ga0207691_10003770 3300025940 Bacteria 14719
160 Ga0207691_10033357 3300025940 Bacteria 4794
161 Ga0207689_10155911 3300025942 Bacteria 1882
162 Ga0207689_10169883 3300025942 Archaea 1797
163 Ga0207661_10071245 3300025944 Bacteria 2840
164 Ga0207661_10187763 3300025944 Bacteria 1810
165 Ga0207651_10004176 3300025960 Bacteria 7227
166 Ga0207651_10009882 3300025960 Bacteria 5251
167 Ga0207651_10028654 3300025960 Bacteria 3516
168 Ga0207651_10201833 3300025960 Bacteria 1594
169 Ga0207712_10009622 3300025961 Bacteria 6121
170 Ga0207712_10044876 3300025961 Bacteria 3058
171 Ga0207712_10201222 3300025961 Bacteria 1580
172 Ga0207658_10051902 3300025986 Bacteria 3024
173 Ga0207703_10015868 3300026035 Bacteria 5877
174 Ga0207703_10330010 3300026035 Bacteria 1399
175 Ga0207708_10025091 3300026075 Bacteria 4509
176 Ga0207708_10165184 3300026075 Bacteria 1750
177 Ga0207708_10181825 3300026075 Bacteria 1670
178 Ga0207641_10018262 3300026088 Bacteria 5749
179 Ga0207641_10284592 3300026088 Bacteria 1556
180 Ga0207648_10003593 3300026089 Bacteria 16219
181 Ga0207648_10006695 3300026089 Bacteria 11430
182 Ga0207648_10033436 3300026089 Bacteria 4535
183 Ga0207676_10015597 3300026095 Bacteria 5486
184 Ga0207676_10023952 3300026095 Bacteria 4512
185 Ga0207674_10002363 3300026116 Bacteria 23849
186 Ga0207675_100026088 3300026118 Bacteria 5438
187 Ga0207675_100064346 3300026118 Bacteria 3428
188 Ga0207683_10070891 3300026121 Bacteria 3080
189 Ga0209971_1028015 3300027682 Bacteria 1348
190 Ga0207428_10000163 3300027907 Bacteria 92085
191 Ga0207428_10003282 3300027907 Bacteria 15733
192 Ga0207428_10008360 3300027907 Bacteria 9349
193 Ga0268266_10053593 3300028379 Bacteria 3466
194 Ga0268265_10032789 3300028380 Bacteria 3768
195 Ga0268265_10033866 3300028380 Bacteria 3718
196 Ga0268265_10210093 3300028380 Bacteria 1695
197 Ga0268264_10013444 3300028381 Bacteria 6739
198 Ga0268264_10056819 3300028381 Bacteria 3272
199 Ga0268264_10142630 3300028381 Bacteria 2138
200 Ga0307408_100158542 3300031548 Bacteria 1795
201 Ga0307405_10002203 3300031731 Bacteria 8518
202 Ga0307410_10053126 3300031852 Bacteria 2740
203 Ga0307406_10014387 3300031901 Bacteria 4552
204 Ga0307407_10038181 3300031903 Bacteria 2659
205 Ga0307412_10167813 3300031911 Bacteria 1638
206 Ga0307409_100009242 3300031995 Bacteria 6043
207 Ga0307409_100049570 3300031995 Bacteria 3202
208 Ga0307414_10009160 3300032004 Bacteria 5670
209 Ga0307415_100010355 3300032126 Bacteria 5278
210 Ga0373937_0071045 3300036401 Bacteria 3211
211 Ga0395900_0357337 3300037418 Bacteria 1433
212 Ga0395905_0056571 3300037471 Bacteria 3669
213 Ga0436364_0020656 3300037853 Bacteria 7253
214 Ga0451576_0058965 3300045051 Bacteria 4009
215 Ga0451576_0083905 3300045051 Bacteria 3314
216 Ga0495592_0079722 3300046454 Bacteria 2370
217 Ga0495603_0146646 3300046455 Bacteria 1372
218 Ga0495651_0157591 3300046462 Bacteria 1630
219 Ga0495664_0045298 3300046477 Bacteria 2609
220 Ga0495645_0037447 3300046543 Bacteria 3536
221 Ga0495633_0055899 3300046558 Bacteria 1855
222 Ga0495659_0003294 3300046664 Bacteria 5177
223 Ga0495674_0146445 3300047319 Bacteria 1982
224 Ga0495675_0053580 3300047444 Bacteria 2561
225 Ga0495602_0050211 3300048088 Bacteria 3729
226 Ga0496102_0110762 3300048905 Bacteria 2559
227 Ga0496104_0131472 3300048907 Bacteria 2404
228 Ga0496105_0035654 3300048908 Bacteria 4095
229 Ga0496106_0063399 3300048909 Bacteria 2809
230 Ga0496107_0075410 3300048910 Bacteria 2455
231 Ga0496108_0093828 3300048911 Bacteria 2554
232 Ga0496109_0101513 3300048912 Bacteria 2670
233 Ga0496110_0001569 3300048913 Bacteria 16663
234 Ga0496112_0346080 3300048915 Bacteria 1429
235 Ga0496113_0195471 3300048916 Bacteria 1607
236 Ga0496114_0019385 3300048917 Bacteria 5511
237 Ga0496115_0000688 3300048918 Bacteria 25056
238 Ga0501040_0056862 3300049576 Bacteria 2685
239 Ga0501041_0058449 3300049577 Bacteria 2359
240 Ga0501048_0060004 3300049582 Bacteria 2695
241 Ga0501069_0012186 3300049585 Bacteria 4568
242 Ga0501072_0042563 3300049588 Bacteria 3567
243 Ga0501072_0122473 3300049588 Bacteria 2072
244 Ga0501073_0060333 3300049589 Bacteria 2647
245 Ga0501076_0037103 3300049592 Bacteria 3821
246 Ga0501076_0130044 3300049592 Bacteria 2042
247 Ga0501079_0087627 3300049741 Bacteria 2410
248 Ga0501081_0009971 3300049743 Bacteria 6193
249 nmdc:mga07m45_23659_c1 3300050496 Bacteria 3360
250 nmdc:mga05p37_178208_c1 3300050507 Bacteria 2588
251 nmdc:mga05p37_211054_c1 3300050507 Bacteria 2347
252 nmdc:mga05p37_21175_c1 3300050507 Bacteria 7872
253 nmdc:mga05p37_3660_c1 3300050507 Bacteria 17971
254 nmdc:mga05p37_7564_c1 3300050507 Bacteria 12814
255 nmdc:mga09592_43572_c1 3300050508 Bacteria 3776
256 nmdc:mga09592_43946_c1 3300050508 Bacteria 3759
257 nmdc:mga0qj67_24578_c1 3300050509 Bacteria 4646
258 nmdc:mga0qj67_9431_c1 3300050509 Bacteria 7265
259 nmdc:mga06r32_117821_c1 3300050510 Bacteria 2617
260 nmdc:mga06r32_16719_c1 3300050510 Bacteria 6687
261 nmdc:mga06r32_241651_c1 3300050510 Bacteria 1793
262 nmdc:mga06r32_24367_c1 3300050510 Bacteria 5615
263 nmdc:mga06r32_68741_c1 3300050510 Bacteria 3423
264 nmdc:mga06r32_79302_c2 3300050510 Unclassified 1864
265 nmdc:mga08y16_156113_c1 3300050511 Bacteria 2371
266 nmdc:mga08y16_165053_c1 3300050511 Bacteria 2301
267 nmdc:mga08y16_25_c1 3300050511 Bacteria 235789
268 nmdc:mga08y16_4500_c1 3300050511 Bacteria 14559
269 nmdc:mga0n895_210879_c1 3300050512 Bacteria 1973
270 nmdc:mga0n895_23075_c1 3300050512 Bacteria 5844
271 nmdc:mga0rr50_162943_c1 3300050513 Bacteria 1811
272 nmdc:mga0rr50_211298_c1 3300050513 Bacteria 1599
273 Ga0495601_0023620 3300053077 Bacteria 3779
274 Ga0495619_0058777 3300053085 Bacteria 2553
275 Ga0500555_018351 3300053103 Bacteria 2016
276 Ga0500645_001972 3300053730 Bacteria 9693
277 Ga0501084_0001973 3300054114 Bacteria 16386
278 Ga0501082_0057409 3300060353 Bacteria 3354
279 Ga0530510_0004988 3300061734 Bacteria 9169
280 Ga0105239_10195922
281 Ga0065712_10005766
282 Ga0065712_10073352
283 Ga0065715_10002023
284 Ga0065715_10180111
285 Ga0065707_10136693
286 Ga0070676_10018405
287 Ga0070683_100052197
288 Ga0070683_100126690
289 Ga0070670_100002927
290 Ga0070670_100025513
291 Ga0068868_100055468
292 Ga0070689_100036400
293 Ga0070692_10011303
294 Ga0070692_10012666
295 Ga0070669_100015005
296 Ga0070675_100008329
297 Ga0070673_100234467
298 Ga0070673_100234853
299 Ga0070688_100003073
300 Ga0070688_100031266
301 Ga0070701_10077160
302 Ga0070705_100013728
303 Ga0070705_100018498
304 Ga0070705_100062140
305 Ga0070705_100063959
306 Ga0070700_100026682
307 Ga0070700_100124455
308 Ga0070694_100003855
309 Ga0070694_100021344
310 Ga0070694_100044472
311 Ga0070708_100000527
312 Ga0070708_100041003
313 Ga0070708_100074869
314 Ga0070662_100039269
315 Ga0068867_100017371
316 Ga0070706_100004853
317 Ga0070707_100032854
318 Ga0070707_100033444
319 Ga0070698_100000182
320 Ga0070698_100001361
321 Ga0070698_100152470
322 Ga0070698_100301172
323 Ga0070699_100009699
324 Ga0070699_100016886
325 Ga0070697_100002841
326 Ga0070697_100024657
327 Ga0070672_100224333
328 Ga0070686_100097281
329 Ga0070695_100001559
330 Ga0070696_100001278
331 Ga0070693_100108646
332 Ga0070665_100022753
333 Ga0070704_100000509
334 Ga0070704_100003039
335 Ga0068857_100037064
336 Ga0068859_100012967
337 Ga0068859_100013604
338 Ga0068859_100045815
339 Ga0068864_100025563
340 Ga0068864_100026197
341 Ga0068864_100098028
342 Ga0068864_100121558
343 Ga0068861_100017374
344 Ga0068870_10002396
345 Ga0068858_100102853
346 Ga0068860_100046034
347 Ga0068862_100000518
348 Ga0068862_100047798
349 Ga0068862_100082861
350 Ga0081455_10001512
351 Ga0081455_10041560
352 Ga0081539_10001414
353 Ga0081539_10037628
354 Ga0075364_10053395
355 Ga0075366_10007663
356 Ga0097621_100120675
357 Ga0097621_100131038
358 Ga0075428_100000794
359 Ga0075428_100006756
360 Ga0075428_100041787
361 Ga0075428_100105190
362 Ga0075430_100004636
363 Ga0075430_100013624
364 Ga0075430_100020008
365 Ga0075431_100002375
366 Ga0075431_100019404
367 Ga0075431_100065224
368 Ga0075431_100092917
369 Ga0075431_100220422
370 Ga0075433_10036969
371 Ga0075433_10055843
372 Ga0075434_100013449
373 Ga0075429_100012512
374 Ga0075429_100051842
375 Ga0068865_100003607
376 Ga0097620_100012967
377 Ga0097620_100013604
378 Ga0097620_100045815
379 Ga0075435_100194003
380 Ga0111539_10000043
381 Ga0111539_10010107
382 Ga0111539_10031527
383 Ga0111539_10070097
384 Ga0111539_10304049
385 Ga0111539_10396403
386 Ga0105247_10018517
387 Ga0114129_10007031
388 Ga0114129_10034569
389 Ga0114129_10094050
390 Ga0105243_10020184
391 Ga0105243_10027281
392 Ga0105242_10112197
393 Ga0105242_10124820
394 Ga0105248_10288314
395 Ga0105238_10016104
396 Ga0105249_10068585
397 Ga0105249_10236656
398 Ga0157374_10029878
399 Ga0157374_10287440
400 Ga0163162_10017552
401 Ga0163162_10020312
402 Ga0157375_10076800
403 Ga0157375_10348945
404 Ga0163163_10000206
405 Ga0163163_10039515
406 Ga0163163_10049913
407 Ga0163163_10425673
408 Ga0157380_10020387
409 Ga0157380_10034968
410 Ga0157380_10148834
411 Ga0157377_10009781
412 Ga0207697_10001054
413 Ga0207710_10024332
414 Ga0207688_10001126
415 Ga0207645_10018604
416 Ga0207643_10001891
417 Ga0207643_10067235
418 Ga0207684_10001275
419 Ga0207662_10105410
420 Ga0207646_10002760
421 Ga0207646_10055000
422 Ga0207646_10168265
423 Ga0207681_10010345
424 Ga0207681_10029424
425 Ga0207694_10014652
426 Ga0207659_10006740
427 Ga0207659_10065644
428 Ga0207659_10080252
429 Ga0207644_10009117
430 Ga0207644_10046993
431 Ga0207706_10042803
432 Ga0207706_10088001
433 Ga0207686_10090102
434 Ga0207709_10015927
435 Ga0207670_10005463
436 Ga0207670_10006933
437 Ga0207704_10031028
438 Ga0207691_10003770
439 Ga0207691_10033357
440 Ga0207689_10155911
441 Ga0207689_10169883
442 Ga0207661_10071245
443 Ga0207661_10187763
444 Ga0207651_10004176
445 Ga0207651_10009882
446 Ga0207651_10028654
447 Ga0207651_10201833
448 Ga0207712_10009622
449 Ga0207712_10044876
450 Ga0207712_10201222
451 Ga0207658_10051902
452 Ga0207703_10015868
453 Ga0207703_10330010
454 Ga0207708_10025091
455 Ga0207708_10165184
456 Ga0207708_10181825
457 Ga0207641_10018262
458 Ga0207641_10284592
459 Ga0207648_10003593
460 Ga0207648_10006695
461 Ga0207648_10033436
462 Ga0207676_10015597
463 Ga0207676_10023952
464 Ga0207674_10002363
465 Ga0207675_100026088
466 Ga0207675_100064346
467 Ga0207683_10070891
468 Ga0209971_1028015
469 Ga0207428_10000163
470 Ga0207428_10003282
471 Ga0207428_10008360
472 Ga0268266_10053593
473 Ga0268265_10032789
474 Ga0268265_10033866
475 Ga0268265_10210093
476 Ga0268264_10013444
477 Ga0268264_10056819
478 Ga0268264_10142630
479 Ga0307408_100158542
480 Ga0307405_10002203
481 Ga0307410_10053126
482 Ga0307406_10014387
483 Ga0307407_10038181
484 Ga0307412_10167813
485 Ga0307409_100009242
486 Ga0307409_100049570
487 Ga0307414_10009160
488 Ga0307415_100010355
489 Ga0373937_0071045
490 Ga0395900_0357337
491 Ga0395905_0056571
492 Ga0436364_0020656
493 Ga0451576_0058965
494 Ga0451576_0083905
495 Ga0495592_0079722
496 Ga0495603_0146646
497 Ga0495651_0157591
498 Ga0495664_0045298
499 Ga0495645_0037447
500 Ga0495633_0055899
501 Ga0495659_0003294
502 Ga0495674_0146445
503 Ga0495675_0053580
504 Ga0495602_0050211
505 Ga0496102_0110762
506 Ga0496104_0131472
507 Ga0496105_0035654
508 Ga0496106_0063399
509 Ga0496107_0075410
510 Ga0496108_0093828
511 Ga0496109_0101513
512 Ga0496110_0001569
513 Ga0496112_0346080
514 Ga0496113_0195471
515 Ga0496114_0019385
516 Ga0496115_0000688
517 Ga0501040_0056862
518 Ga0501041_0058449
519 Ga0501048_0060004
520 Ga0501069_0012186
521 Ga0501072_0042563
522 Ga0501072_0122473
523 Ga0501073_0060333
524 Ga0501076_0037103
525 Ga0501076_0130044
526 Ga0501079_0087627
527 Ga0501081_0009971
528 nmdc:mga07m45_23659_c1
529 nmdc:mga05p37_178208_c1
530 nmdc:mga05p37_211054_c1
531 nmdc:mga05p37_21175_c1
532 nmdc:mga05p37_3660_c1
533 nmdc:mga05p37_7564_c1
534 nmdc:mga09592_43572_c1
535 nmdc:mga09592_43946_c1
536 nmdc:mga0qj67_24578_c1
537 nmdc:mga0qj67_9431_c1
538 nmdc:mga06r32_117821_c1
539 nmdc:mga06r32_16719_c1
540 nmdc:mga06r32_241651_c1
541 nmdc:mga06r32_24367_c1
542 nmdc:mga06r32_68741_c1
543 nmdc:mga06r32_79302_c2
544 nmdc:mga08y16_156113_c1
545 nmdc:mga08y16_165053_c1
546 nmdc:mga08y16_25_c1
547 nmdc:mga08y16_4500_c1
548 nmdc:mga0n895_210879_c1
549 nmdc:mga0n895_23075_c1
550 nmdc:mga0rr50_162943_c1
551 nmdc:mga0rr50_211298_c1
552 Ga0495601_0023620
553 Ga0495619_0058777
554 Ga0500555_018351
555 Ga0500645_001972
556 Ga0501084_0001973
557 Ga0501082_0057409
558 Ga0530510_0004988

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

290

439

0.99

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

68

180

0.99

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

305

428

0.98

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

183

278

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jif-assembly1.cif.gz_D structure of human short-branched chain acyl-coa dehydrogenase (acadsb) 0.7649 3 351
3gqt-assembly2.cif.gz_B crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment (1,4-dimethyl-1,2,3,4-tetrahydroquinoxalin-6-yl)methylamine 0.76 8 353
4l1f-assembly1.cif.gz_A electron transferring flavoprotein of acidaminococcus fermentans: towards a mechanism of flavin-based electron bifurcation 0.7595 6 352
7xp7-assembly2.cif.gz_C crystal structure of the flavoprotein colb1 catalyzing assembly line-tethered cysteine dehydrogenation 0.7594 12 351
3eom-assembly1.cif.gz_B 2.4 a crystal structure of native glutaryl-coa dehydrogenase from burkholderia pseudomallei 0.7585 8 353
ID Description Score Start End Superfamily
2jifA01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9625 3 118 1.10.540.10
1ws9A01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9404 9 120 1.10.540.10
2jifA01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.939 3 118 1.10.540.10
5lnxB01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9364 11 120 1.10.540.10
2cx9B01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9315 9 120 1.10.540.10
ID Description Score Start End GO Terms
AF-A0A2G8K828-F1-model_v4 Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) (2-methyl branched chain acyl-CoA dehydrogenase) (2-methylbutyryl-coenzyme A dehydrogenase) 0.965 3 177 GO:0003995
GO:0005739
GO:0006631
GO:0050660
AF-A0A0B1SPR9-F1-model_v4 Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) (2-methyl branched chain acyl-CoA dehydrogenase) (2-methylbutyryl-coenzyme A dehydrogenase) 0.9614 34 263 GO:0003995
GO:0005739
GO:0006631
GO:0050660
AF-A0A2V3I1F2-F1-model_v4 Acyl-CoA dehydrogenase 0.9591 7 124 GO:0003995
GO:0050660
AF-A0A7C7L8F3-F1-model_v4 Acyl-CoA dehydrogenase 0.9585 7 269 GO:0003995
GO:0050660
AF-A0A0S7YGG8-F1-model_v4 Acyl-CoA dehydrogenase 0.954 6 271 GO:0003995
GO:0050660

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