F383622

General Info

Members Datasets Scaffolds Average Seq Length
280 155 275 249

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10001678|Ga0111539_1000167813
Length 279
Sequence LGSYVRKFGFLNNLERRLYLRLNIGTHDPMLKALIVDDEPKARENLQILLHDFVEGVAVVGLCENIAEATEAVRLHSPDVVFLDIQLQRETGLDLLTKLKEINFEVIFTTAYTEYAIKAFKFSAIDYLLKPIDIEELRKAVGRVEKRVSNNMTGRLTQLVQNLKQGSNENYKIALPTLDGLVFVKISDILYCEASSNYTQIFTAEEKYLVSKTLKEYDDLLSDHNFFRIHNSYLININSIKKYVKGEGGYVVLNNDTSLDVSKRKKEAFLNRIGIRQSN

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
3 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
117 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
118 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
126 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
142 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
143 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
149 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
150 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
151 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
154 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
155 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.86
Metatranscriptomes 0.71
Isolates 1.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.29
Nodule 0
Rhizoplane 0
Rhizosphere 77.86
Stem 0
Stem Tuber 0
Unclassified 12.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10001119 3300002459 Bacteria 5775
2 rootH1_10000531 3300003316 Bacteria 16348
3 rootH1_10011168 3300003316 Bacteria 25878
4 rootH1_10029095 3300003316 Bacteria 12373
5 rootH2_10008108 3300003320 Bacteria 29755
6 rootH2_10034898 3300003320 Bacteria 23581
7 rootH2_10049634 3300003320 Bacteria 4954
8 rootH2_10107766 3300003320 Bacteria 1978
9 rootH2_10126418 3300003320 Unclassified 3273
10 rootH2_10195662 3300003320 Bacteria 1421
11 rootH2_10306461 3300003320 Unclassified 1438
12 rootL2_10000690 3300003322 Bacteria 28853
13 rootL2_10004970 3300003322 Bacteria 7055
14 rootL2_10013151 3300003322 Bacteria 10574
15 rootL2_10028586 3300003322 Bacteria 12173
16 rootL2_10088728 3300003322 Bacteria 1964
17 rootL2_10200495 3300003322 Bacteria 1860
18 rootL2_10214179 3300003322 Bacteria 3488
19 rootL2_10244983 3300003322 Bacteria 4444
20 rootL2_10259580 3300003322 Bacteria 1461
21 rootL2_10288538 3300003322 Bacteria 1396
22 rootL2_10342468 3300003322 Unclassified 2248
23 rootH1_10001857 3300003323 Bacteria 19772
24 rootH1_10054826 3300003323 Bacteria 6189
25 rootH1_10062413 3300003323 Unclassified 1187
26 rootH1_10192480 3300003323 Unclassified 2113
27 rootH1_10230992 3300003323 Unclassified 1441
28 rootH1_10372964 3300003323 Bacteria 1133
29 JGI25404J52841_10029969 3300003659 Bacteria 1166
30 Ga0055536_1008506 3300003781 Bacteria 4401
31 Ga0055536_1010779 3300003781 Bacteria 3581
32 Ga0055531_10000143 3300003794 Bacteria 82284
33 Ga0065165_1001451 3300005262 Bacteria 25653
34 Ga0065165_1003186 3300005262 Bacteria 12010
35 Ga0065707_10173868 3300005295 Unclassified 1465
36 Ga0070690_100325891 3300005330 Unclassified 1108
37 Ga0070670_100006171 3300005331 Bacteria 10130
38 Ga0070670_100379310 3300005331 Bacteria 1245
39 Ga0070677_10009298 3300005333 Bacteria 3329
40 Ga0068869_100079721 3300005334 Bacteria 2441
41 Ga0070666_10065399 3300005335 Bacteria 2468
42 Ga0068868_100009397 3300005338 Bacteria 7033
43 Ga0070691_10018495 3300005341 Unclassified 3213
44 Ga0070668_100075524 3300005347 Bacteria 2631
45 Ga0070675_100112933 3300005354 Bacteria 2301
46 Ga0070671_100240329 3300005355 Bacteria 1537
47 Ga0070674_100059228 3300005356 Bacteria 2665
48 Ga0070674_100097969 3300005356 Bacteria 2131
49 Ga0070667_100100497 3300005367 Bacteria 2498
50 Ga0070667_100163057 3300005367 Bacteria 1964
51 Ga0070667_100260954 3300005367 Bacteria 1551
52 Ga0070678_100015125 3300005456 Bacteria 4894
53 Ga0070678_100365087 3300005456 Bacteria 1245
54 Ga0068867_100236433 3300005459 Unclassified 1479
55 Ga0068853_100017373 3300005539 Bacteria 5941
56 Ga0068853_100073505 3300005539 Bacteria 2981
57 Ga0070672_100251213 3300005543 Bacteria 1489
58 Ga0070665_100000018 3300005548 Bacteria 434118
59 Ga0070665_100040237 3300005548 Bacteria 4699
60 Ga0068855_100004257 3300005563 Bacteria 17479
61 Ga0068855_100426296 3300005563 Unclassified 1450
62 Ga0068857_100011342 3300005577 Bacteria 7753
63 Ga0068857_100566909 3300005577 Unclassified 1071
64 Ga0068854_100069441 3300005578 Unclassified 2572
65 Ga0068856_100007696 3300005614 Bacteria 10513
66 Ga0068856_100229390 3300005614 Unclassified 1872
67 Ga0068852_100577078 3300005616 Bacteria 1127
68 Ga0068859_100019662 3300005617 Bacteria 6782
69 Ga0068859_100112722 3300005617 Bacteria 2783
70 Ga0068859_100229805 3300005617 Bacteria 1943
71 Ga0068859_100252624 3300005617 Bacteria 1853
72 Ga0068864_100081797 3300005618 Bacteria 2832
73 Ga0068864_100318431 3300005618 Bacteria 1460
74 Ga0068866_10025131 3300005718 Bacteria 2797
75 Ga0068861_100089240 3300005719 Bacteria 2430
76 Ga0068851_10000038 3300005834 Bacteria 94124
77 Ga0068851_10229048 3300005834 Bacteria 1047
78 Ga0068870_10133058 3300005840 Bacteria 1447
79 Ga0068863_100005895 3300005841 Bacteria 12011
80 Ga0068863_100180483 3300005841 Bacteria 2026
81 Ga0068860_100000252 3300005843 Bacteria 79891
82 Ga0068860_100054664 3300005843 Bacteria 3795
83 Ga0068860_100272275 3300005843 Bacteria 1653
84 Ga0068862_100139776 3300005844 Bacteria 2149
85 Ga0068862_100649443 3300005844 Bacteria 1017
86 Ga0097621_100006936 3300006237 Bacteria 8064
87 Ga0097621_100075225 3300006237 Bacteria 2798
88 Ga0097621_100161264 3300006237 Bacteria 1928
89 Ga0068871_100004752 3300006358 Bacteria 9491
90 Ga0075428_100136984 3300006844 Unclassified 2662
91 Ga0075428_100195115 3300006844 Unclassified 2190
92 Ga0068865_100004371 3300006881 Bacteria 8517
93 Ga0097620_100019662 3300006931 Bacteria 6782
94 Ga0097620_100112725 3300006931 Bacteria 2783
95 Ga0097620_100229830 3300006931 Bacteria 1943
96 Ga0105240_10179677 3300009093 Bacteria 2498
97 Ga0111539_10001678 3300009094 Bacteria 29521
98 Ga0111539_10023535 3300009094 Bacteria 7568
99 Ga0111539_10416162 3300009094 Bacteria 1565
100 Ga0105245_10094685 3300009098 Bacteria 2754
101 Ga0114129_11078157 3300009147 Unclassified 1007
102 Ga0105243_10113433 3300009148 Unclassified 2273
103 Ga0105242_10032547 3300009176 Bacteria 4170
104 Ga0105242_10164572 3300009176 Bacteria 1945
105 Ga0105237_10297614 3300009545 Bacteria 1616
106 Ga0105249_10000561 3300009553 Bacteria 34246
107 Ga0105249_10028733 3300009553 Bacteria 5019
108 Ga0105249_10129242 3300009553 Unclassified 2410
109 Ga0105249_10312371 3300009553 Unclassified 1581
110 Ga0105249_10391316 3300009553 Bacteria 1418
111 Ga0105239_10000808 3300010375 Bacteria 44369
112 Ga0105239_10234188 3300010375 Bacteria 2061
113 Ga0105246_10001022 3300011119 Bacteria 16075
114 Ga0157370_10067394 3300013104 Unclassified 3383
115 Ga0157369_10831480 3300013105 Unclassified 948
116 Ga0157374_10029823 3300013296 Bacteria 4947
117 Ga0157378_10200985 3300013297 Bacteria 1885
118 Ga0163162_10001303 3300013306 Bacteria 23341
119 Ga0157372_10005834 3300013307 Bacteria 13116
120 Ga0157372_10240582 3300013307 Bacteria 2100
121 Ga0157372_10271230 3300013307 Bacteria 1972
122 Ga0157375_10168155 3300013308 Bacteria 2339
123 Ga0157375_10273026 3300013308 Bacteria 1853
124 Ga0163163_10411306 3300014325 Bacteria 1411
125 Ga0157380_10000020 3300014326 Bacteria 114925
126 Ga0157380_10000054 3300014326 Bacteria 65705
127 Ga0157380_10010536 3300014326 Bacteria 6653
128 Ga0157380_10135510 3300014326 Bacteria 2107
129 Ga0163161_10482820 3300017792 Bacteria 1006
130 Ga0209676_1001637 3300025292 Bacteria 19691
131 Ga0209050_1003160 3300025298 Bacteria 12541
132 Ga0209050_1004804 3300025298 Bacteria 8891
133 Ga0209257_1000005 3300025304 Bacteria 1592528
134 Ga0207697_10032222 3300025315 Bacteria 2145
135 Ga0207656_10003199 3300025321 Bacteria 5598
136 Ga0207682_10093575 3300025893 Unclassified 1306
137 Ga0207642_10030396 3300025899 Bacteria 2249
138 Ga0207680_10056896 3300025903 Bacteria 2364
139 Ga0207645_10000356 3300025907 Bacteria 37874
140 Ga0207643_10022888 3300025908 Bacteria 3443
141 Ga0207695_10116112 3300025913 Bacteria 2650
142 Ga0207681_10576562 3300025923 Unclassified 928
143 Ga0207650_10002639 3300025925 Bacteria 12406
144 Ga0207650_10143353 3300025925 Bacteria 1880
145 Ga0207659_10430437 3300025926 Unclassified 1108
146 Ga0207687_10059023 3300025927 Bacteria 2701
147 Ga0207644_10144714 3300025931 Unclassified 1834
148 Ga0207706_10048592 3300025933 Bacteria 3752
149 Ga0207686_10294267 3300025934 Unclassified 1203
150 Ga0207686_10446408 3300025934 Unclassified 994
151 Ga0207669_10039719 3300025937 Bacteria 2722
152 Ga0207669_10546400 3300025937 Bacteria 934
153 Ga0207704_10460093 3300025938 Unclassified 1017
154 Ga0207691_10002055 3300025940 Bacteria 19671
155 Ga0207689_10006221 3300025942 Bacteria 10571
156 Ga0207689_10007013 3300025942 Bacteria 9906
157 Ga0207689_10009783 3300025942 Bacteria 8259
158 Ga0207667_10036371 3300025949 Bacteria 5278
159 Ga0207667_10575051 3300025949 Unclassified 1138
160 Ga0207651_10040279 3300025960 Bacteria 3089
161 Ga0207712_10014775 3300025961 Bacteria 5028
162 Ga0207668_10647949 3300025972 Bacteria 924
163 Ga0207658_10230095 3300025986 Bacteria 1564
164 Ga0207677_10014240 3300026023 Bacteria 4637
165 Ga0207639_10013035 3300026041 Bacteria 5804
166 Ga0207702_10021636 3300026078 Bacteria 5325
167 Ga0207702_10193340 3300026078 Unclassified 1882
168 Ga0207641_10010223 3300026088 Bacteria 7717
169 Ga0207641_10280749 3300026088 Bacteria 1566
170 Ga0207648_10003234 3300026089 Bacteria 17145
171 Ga0207648_10356069 3300026089 Unclassified 1320
172 Ga0207676_10149879 3300026095 Unclassified 2008
173 Ga0207676_10270649 3300026095 Bacteria 1538
174 Ga0207676_10802595 3300026095 Unclassified 918
175 Ga0207674_10025245 3300026116 Bacteria 6341
176 Ga0207674_10291705 3300026116 Unclassified 1580
177 Ga0207675_100085657 3300026118 Bacteria 2958
178 Ga0207683_10001338 3300026121 Bacteria 22249
179 Ga0207683_10308997 3300026121 Bacteria 1447
180 Ga0207698_10619763 3300026142 Bacteria 1069
181 Ga0207428_10070034 3300027907 Unclassified 2757
182 Ga0268266_10000026 3300028379 Bacteria 434485
183 Ga0268266_10741748 3300028379 Unclassified 947
184 Ga0268265_10218766 3300028380 Bacteria 1665
185 Ga0268264_10000015 3300028381 Bacteria 508501
186 Ga0268264_10000019 3300028381 Bacteria 488112
187 Ga0268264_10000054 3300028381 Bacteria 317048
188 Ga0268264_10018005 3300028381 Bacteria 5777
189 Ga0268264_10062834 3300028381 Bacteria 3120
190 Ga0268264_10253582 3300028381 Bacteria 1636
191 Ga0268264_10289189 3300028381 Unclassified 1538
192 Ga0307515_10000031 3300028794 Bacteria 358648
193 Ga0307515_10000681 3300028794 Bacteria 78150
194 Ga0265327_10001105 3300031251 Bacteria 37387
195 Ga0265327_10057090 3300031251 Bacteria 2009
196 Ga0307513_10059019 3300031456 Bacteria 4074
197 Ga0307513_10277570 3300031456 Bacteria 1455
198 Ga0307509_10010139 3300031507 Bacteria 11601
199 Ga0307509_10032369 3300031507 Bacteria 5762
200 Ga0307509_10176783 3300031507 Bacteria 2006
201 Ga0307408_100209762 3300031548 Bacteria 1582
202 Ga0307508_10057060 3300031616 Bacteria 3456
203 Ga0316576_10095334 3300031727 Bacteria 2220
204 Ga0316578_10179128 3300031728 Unclassified 1277
205 Ga0307405_10033910 3300031731 Bacteria 3033
206 Ga0307413_10074089 3300031824 Bacteria 2155
207 Ga0307412_10043912 3300031911 Bacteria 2914
208 Ga0307412_10058030 3300031911 Bacteria 2587
209 Ga0307414_10084362 3300032004 Bacteria 2336
210 Ga0307414_10136441 3300032004 Bacteria 1914
211 Ga0307411_10163740 3300032005 Bacteria 1669
212 Ga0316588_1003232 3300033528 Bacteria 2945
213 Ga0316588_1012577 3300033528 Unclassified 1825
214 Ga0316584_0039816 3300036712 Bacteria 3500
215 Ga0400483_077352 3300039062 Bacteria 1661
216 Ga0451577_0000030 3300042876 Bacteria 391423
217 Ga0451577_0033529 3300042876 Bacteria 4629
218 Ga0451577_0169852 3300042876 Bacteria 1965
219 Ga0451577_0253176 3300042876 Unclassified 1594
220 Ga0451577_0256426 3300042876 Bacteria 1583
221 Ga0451577_0556232 3300042876 Unclassified 1041
222 Ga0453683_0000040 3300044673 Bacteria 225430
223 Ga0453683_0005612 3300044673 Bacteria 8720
224 Ga0453683_0043678 3300044673 Bacteria 2812
225 Ga0453683_0184518 3300044673 Unclassified 1323
226 Ga0453684_0000165 3300044712 Bacteria 294572
227 Ga0453684_0000461 3300044712 Bacteria 162371
228 Ga0453684_0001351 3300044712 Bacteria 71672
229 Ga0453684_0004204 3300044712 Bacteria 30947
230 Ga0453684_0015951 3300044712 Bacteria 11812
231 Ga0453684_0019831 3300044712 Bacteria 10201
232 Ga0453684_0290661 3300044712 Bacteria 1861
233 Ga0453684_0701190 3300044712 Bacteria 1100
234 Ga0466970_0080892 3300044765 Unclassified 1756
235 Ga0451576_0000172 3300045051 Bacteria 162376
236 Ga0451576_0028185 3300045051 Bacteria 6020
237 Ga0451576_0033729 3300045051 Bacteria 5440
238 Ga0451576_0043940 3300045051 Bacteria 4712
239 Ga0451576_0155133 3300045051 Unclassified 2388
240 Ga0451576_0477756 3300045051 Bacteria 1309
241 Ga0451576_0487409 3300045051 Unclassified 1295
242 Ga0495592_0157694 3300046454 Unclassified 1564
243 Ga0495638_0000006 3300046460 Bacteria 668846
244 Ga0495638_0024538 3300046460 Bacteria 3930
245 Ga0495638_0183031 3300046460 Bacteria 1194
246 Ga0495648_0001051 3300046524 Bacteria 28002
247 Ga0495640_0206551 3300046533 Bacteria 1243
248 Ga0495668_0000023 3300046616 Bacteria 363848
249 Ga0495687_000031 3300047443 Bacteria 274659
250 Ga0495681_0100862 3300047470 Bacteria 1262
251 Ga0501033_0187605 3300049570 Bacteria 1481
252 Ga0501043_0124020 3300049579 Unclassified 2025
253 Ga0501217_146425 3300049661 Bacteria 703
254 Ga0501257_001063 3300049686 Bacteria 5558
255 Ga0501257_003123 3300049686 Bacteria 3526
256 Ga0501225_0019338 3300049705 Bacteria 1885
257 Ga0501035_0138616 3300049822 Bacteria 2116
258 nmdc:mga08y16_614231_c1 3300050511 Unclassified 1095
259 nmdc:mga08y16_71704_c1 3300050511 Unclassified 3610
260 Ga0500644_0040973 3300053088 Bacteria 1536
261 Ga0500583_0014035 3300053092 Bacteria 3123
262 Ga0500594_0027794 3300053118 Bacteria 1467
263 Ga0500642_0020243 3300053130 Archaea 2612
264 Ga0500652_173944 3300053131 Unclassified 885
265 Ga0500604_0001621 3300053151 Bacteria 6317
266 Ga0500604_0002279 3300053151 Bacteria 5252
267 Ga0500616_0000082 3300053153 Bacteria 198665
268 Ga0500616_0108276 3300053153 Unclassified 1347
269 Ga0500616_0118465 3300053153 Unclassified 1268
270 Ga0500622_0000007 3300053156 Bacteria 425621
271 Ga0500622_0000013 3300053156 Bacteria 371650
272 Ga0500622_0000483 3300053156 Bacteria 37330
273 Ga0500622_0002533 3300053156 Bacteria 13120
274 Ga0500627_0086163 3300053158 Bacteria 1403
275 Ga0500611_000003 3300053727 Bacteria 333431

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009553 Ga0105249_10129242 Ga0105249_101292422 205
2 3300028381 Ga0268264_10000054 Ga0268264_10000054110 211
3 3300049661 Ga0501217_146425 Ga0501217_146425_18_668 216
4 3300046460 Ga0495638_0183031 Ga0495638_0183031_35_688 217
5 3300009176 Ga0105242_10164572 Ga0105242_101645722 225
6 3300009545 Ga0105237_10297614 Ga0105237_102976143 231
7 3300047470 Ga0495681_0100862 Ga0495681_0100862_490_1242 233
8 3300053118 Ga0500594_0027794 Ga0500594_0027794_492_1211 233
9 3300053131 Ga0500652_173944 Ga0500652_173944_47_766 233
10 3300053151 Ga0500604_0001621 Ga0500604_0001621_5233_5952 233
11 3300042876 Ga0451577_0256426 Ga0451577_0256426_669_1424 235
12 3300044673 Ga0453683_0005612 Ga0453683_0005612_6796_7551 235
13 3300044712 Ga0453684_0290661 Ga0453684_0290661_389_1144 235
14 3300044765 Ga0466970_0080892 Ga0466970_0080892_430_1176 235
15 3300045051 Ga0451576_0155133 Ga0451576_0155133_571_1326 235
16 3300014326 Ga0157380_10000054 Ga0157380_1000005422 237
17 3300013105 Ga0157369_10831480 Ga0157369_108314801 239
18 3300053727 Ga0500611_000003 Ga0500611_000003_287026_287745 239
19 3300003316 rootH1_10029095 rootH1_100290952 242
20 3300003322 rootL2_10214179 rootL2_102141792 242
21 3300003322 rootL2_10288538 rootL2_102885382 242
22 3300003323 rootH1_10062413 rootH1_100624131 242
23 3300003323 rootH1_10372964 rootH1_103729641 242
24 3300005617 Ga0068859_100229805 Ga0068859_1002298052 242
25 3300005843 Ga0068860_100272275 Ga0068860_1002722752 242
26 3300006931 Ga0097620_100229830 Ga0097620_1002298302 242
27 3300028381 Ga0268264_10253582 Ga0268264_102535822 242
28 3300039062 Ga0400483_077352 Ga0400483_077352_97_837 242
29 3300053156 Ga0500622_0000483 Ga0500622_0000483_31204_31953 242
30 iso_pu_bacteria 2881955468 2881956082 243
31 iso_pu_bacteria 2522125168 2522550893 244
32 3300005295 Ga0065707_10173868 Ga0065707_101738681 245
33 3300006237 Ga0097621_100075225 Ga0097621_1000752253 245
34 3300013307 Ga0157372_10240582 Ga0157372_102405822 245
35 3300013307 Ga0157372_10271230 Ga0157372_102712301 245
36 3300026089 Ga0207648_10356069 Ga0207648_103560692 245
37 3300031251 Ga0265327_10001105 Ga0265327_100011052 245
38 3300031824 Ga0307413_10074089 Ga0307413_100740893 245
39 3300005354 Ga0070675_100112933 Ga0070675_1001129332 246
40 3300005616 Ga0068852_100577078 Ga0068852_1005770782 246
41 3300005834 Ga0068851_10000038 Ga0068851_1000003855 246
42 3300025321 Ga0207656_10003199 Ga0207656_100031993 246
43 3300026142 Ga0207698_10619763 Ga0207698_106197632 246
44 3300031728 Ga0316578_10179128 Ga0316578_101791282 246
45 3300036712 Ga0316584_0039816 Ga0316584_0039816_995_1738 246
46 3300042876 Ga0451577_0169852 Ga0451577_0169852_402_1151 246
47 3300042876 Ga0451577_0253176 Ga0451577_0253176_677_1426 246
48 3300042876 Ga0451577_0556232 Ga0451577_0556232_39_788 246
49 3300044712 Ga0453684_0000165 Ga0453684_0000165_103658_104407 246
50 3300044712 Ga0453684_0001351 Ga0453684_0001351_16849_17598 246
51 3300044712 Ga0453684_0004204 Ga0453684_0004204_1686_2435 246
52 3300045051 Ga0451576_0033729 Ga0451576_0033729_670_1419 246
53 3300045051 Ga0451576_0043940 Ga0451576_0043940_443_1201 246
54 3300045051 Ga0451576_0487409 Ga0451576_0487409_422_1171 246
55 3300049570 Ga0501033_0187605 Ga0501033_0187605_218_961 246
56 3300049579 Ga0501043_0124020 Ga0501043_0124020_797_1540 246
57 3300049822 Ga0501035_0138616 Ga0501035_0138616_133_876 246
58 3300053158 Ga0500627_0086163 Ga0500627_0086163_158_901 246
59 3300003320 rootH2_10034898 rootH2_1003489817 247
60 3300003320 rootH2_10049634 rootH2_100496345 247
61 3300003320 rootH2_10107766 rootH2_101077661 247
62 3300003322 rootL2_10004970 rootL2_100049702 247
63 3300003322 rootL2_10200495 rootL2_102004951 247
64 3300003322 rootL2_10244983 rootL2_102449834 247
65 3300003323 rootH1_10192480 rootH1_101924802 247
66 3300003659 JGI25404J52841_10029969 JGI25404J52841_100299692 247
67 3300005367 Ga0070667_100260954 Ga0070667_1002609541 247
68 3300005548 Ga0070665_100000018 Ga0070665_10000001893 247
69 3300005563 Ga0068855_100004257 Ga0068855_1000042572 247
70 3300005614 Ga0068856_100007696 Ga0068856_1000076963 247
71 3300005843 Ga0068860_100000252 Ga0068860_10000025236 247
72 3300006844 Ga0075428_100195115 Ga0075428_1001951152 247
73 3300009093 Ga0105240_10179677 Ga0105240_101796772 247
74 3300009094 Ga0111539_10001678 Ga0111539_1000167813 247
75 3300009098 Ga0105245_10094685 Ga0105245_100946852 247
76 3300009553 Ga0105249_10312371 Ga0105249_103123712 247
77 3300009553 Ga0105249_10391316 Ga0105249_103913162 247
78 3300010375 Ga0105239_10000808 Ga0105239_100008085 247
79 3300010375 Ga0105239_10234188 Ga0105239_102341883 247
80 3300013296 Ga0157374_10029823 Ga0157374_100298236 247
81 3300013297 Ga0157378_10200985 Ga0157378_102009852 247
82 3300013306 Ga0163162_10001303 Ga0163162_100013036 247
83 3300013307 Ga0157372_10005834 Ga0157372_100058343 247
84 3300014326 Ga0157380_10010536 Ga0157380_100105363 247
85 3300014326 Ga0157380_10135510 Ga0157380_101355102 247
86 3300025913 Ga0207695_10116112 Ga0207695_101161122 247
87 3300025927 Ga0207687_10059023 Ga0207687_100590232 247
88 3300025934 Ga0207686_10294267 Ga0207686_102942671 247
89 3300025949 Ga0207667_10036371 Ga0207667_100363712 247
90 3300025986 Ga0207658_10230095 Ga0207658_102300953 247
91 3300026078 Ga0207702_10021636 Ga0207702_100216362 247
92 3300027907 Ga0207428_10070034 Ga0207428_100700342 247
93 3300028379 Ga0268266_10000026 Ga0268266_10000026268 247
94 3300028381 Ga0268264_10000015 Ga0268264_10000015164 247
95 3300028381 Ga0268264_10000019 Ga0268264_10000019262 247
96 3300031251 Ga0265327_10057090 Ga0265327_100570902 247
97 3300031507 Ga0307509_10010139 Ga0307509_1001013910 247
98 3300031616 Ga0307508_10057060 Ga0307508_100570602 247
99 3300046454 Ga0495592_0157694 Ga0495592_0157694_292_1035 247
100 3300046460 Ga0495638_0024538 Ga0495638_0024538_2236_3003 247
101 3300046524 Ga0495648_0001051 Ga0495648_0001051_3668_4435 247
102 3300046533 Ga0495640_0206551 Ga0495640_0206551_314_1057 247
103 3300047443 Ga0495687_000031 Ga0495687_000031_55178_55945 247
104 3300049686 Ga0501257_003123 Ga0501257_003123_1986_2765 247
105 3300049705 Ga0501225_0019338 Ga0501225_0019338_1131_1874 247
106 3300050511 nmdc:mga08y16_71704_c1 nmdc:mga08y16_71704_c1_729_1481 247
107 3300053092 Ga0500583_0014035 Ga0500583_0014035_186_953 247
108 3300053130 Ga0500642_0020243 Ga0500642_0020243_1386_2153 247
109 3300053156 Ga0500622_0002533 Ga0500622_0002533_4603_5370 247
110 iso_pu_bacteria 2958512119 2958515121 247
111 3300003316 rootH1_10000531 rootH1_1000053112 248
112 3300003316 rootH1_10011168 rootH1_1001116817 248
113 3300003320 rootH2_10008108 rootH2_100081084 248
114 3300003320 rootH2_10126418 rootH2_101264182 248
115 3300003320 rootH2_10195662 rootH2_101956623 248
116 3300003320 rootH2_10306461 rootH2_103064612 248
117 3300003322 rootL2_10000690 rootL2_100006902 248
118 3300003322 rootL2_10028586 rootL2_1002858610 248
119 3300003322 rootL2_10088728 rootL2_100887282 248
120 3300003322 rootL2_10259580 rootL2_102595802 248
121 3300003322 rootL2_10342468 rootL2_103424682 248
122 3300003323 rootH1_10001857 rootH1_1000185711 248
123 3300003323 rootH1_10054826 rootH1_100548262 248
124 3300003323 rootH1_10230992 rootH1_102309921 248
125 3300003794 Ga0055531_10000143 Ga0055531_1000014324 248
126 3300005262 Ga0065165_1001451 Ga0065165_100145119 248
127 3300005341 Ga0070691_10018495 Ga0070691_100184952 248
128 3300005367 Ga0070667_100100497 Ga0070667_1001004973 248
129 3300005456 Ga0070678_100365087 Ga0070678_1003650871 248
130 3300005563 Ga0068855_100426296 Ga0068855_1004262962 248
131 3300005577 Ga0068857_100566909 Ga0068857_1005669091 248
132 3300005614 Ga0068856_100229390 Ga0068856_1002293902 248
133 3300005617 Ga0068859_100112722 Ga0068859_1001127222 248
134 3300005618 Ga0068864_100081797 Ga0068864_1000817973 248
135 3300005834 Ga0068851_10229048 Ga0068851_102290481 248
136 3300005841 Ga0068863_100180483 Ga0068863_1001804832 248
137 3300006844 Ga0075428_100136984 Ga0075428_1001369842 248
138 3300006931 Ga0097620_100112725 Ga0097620_1001127252 248
139 3300009094 Ga0111539_10023535 Ga0111539_100235355 248
140 3300013104 Ga0157370_10067394 Ga0157370_100673943 248
141 3300013308 Ga0157375_10168155 Ga0157375_101681553 248
142 3300013308 Ga0157375_10273026 Ga0157375_102730261 248
143 3300014326 Ga0157380_10000020 Ga0157380_1000002045 248
144 3300017792 Ga0163161_10482820 Ga0163161_104828201 248
145 3300025304 Ga0209257_1000005 Ga0209257_1000005962 248
146 3300025931 Ga0207644_10144714 Ga0207644_101447142 248
147 3300025949 Ga0207667_10575051 Ga0207667_105750512 248
148 3300026078 Ga0207702_10193340 Ga0207702_101933402 248
149 3300026088 Ga0207641_10280749 Ga0207641_102807492 248
150 3300026095 Ga0207676_10149879 Ga0207676_101498792 248
151 3300026095 Ga0207676_10802595 Ga0207676_108025951 248
152 3300026121 Ga0207683_10308997 Ga0207683_103089972 248
153 3300028794 Ga0307515_10000681 Ga0307515_1000068114 248
154 3300031456 Ga0307513_10277570 Ga0307513_102775701 248
155 3300031507 Ga0307509_10032369 Ga0307509_100323696 248
156 3300031507 Ga0307509_10176783 Ga0307509_101767832 248
157 3300031548 Ga0307408_100209762 Ga0307408_1002097622 248
158 3300031727 Ga0316576_10095334 Ga0316576_100953342 248
159 3300031731 Ga0307405_10033910 Ga0307405_100339102 248
160 3300031911 Ga0307412_10058030 Ga0307412_100580303 248
161 3300032004 Ga0307414_10084362 Ga0307414_100843621 248
162 3300032005 Ga0307411_10163740 Ga0307411_101637402 248
163 3300033528 Ga0316588_1003232 Ga0316588_10032322 248
164 3300033528 Ga0316588_1012577 Ga0316588_10125772 248
165 3300044712 Ga0453684_0015951 Ga0453684_0015951_5259_6008 248
166 3300049686 Ga0501257_001063 Ga0501257_001063_489_1238 248
167 3300050511 nmdc:mga08y16_614231_c1 nmdc:mga08y16_614231_c1_252_1058 248
168 3300053088 Ga0500644_0040973 Ga0500644_0040973_686_1435 248
169 3300053151 Ga0500604_0002279 Ga0500604_0002279_4201_4950 248
170 3300053153 Ga0500616_0108276 Ga0500616_0108276_498_1256 248
171 3300053153 Ga0500616_0118465 Ga0500616_0118465_303_1052 248
172 3300053156 Ga0500622_0000007 Ga0500622_0000007_366400_367149 248
173 3300053156 Ga0500622_0000013 Ga0500622_0000013_6232_6981 248
174 iso_pu_bacteria 2522125168 2522551250 248
175 3300002459 JGI24751J29686_10001119 JGI24751J29686_100011192 249
176 3300003322 rootL2_10013151 rootL2_100131516 249
177 3300003781 Ga0055536_1008506 Ga0055536_10085063 249
178 3300003781 Ga0055536_1010779 Ga0055536_10107792 249
179 3300005262 Ga0065165_1003186 Ga0065165_10031866 249
180 3300005330 Ga0070690_100325891 Ga0070690_1003258912 249
181 3300005331 Ga0070670_100006171 Ga0070670_1000061714 249
182 3300005331 Ga0070670_100379310 Ga0070670_1003793102 249
183 3300005333 Ga0070677_10009298 Ga0070677_100092982 249
184 3300005334 Ga0068869_100079721 Ga0068869_1000797212 249
185 3300005335 Ga0070666_10065399 Ga0070666_100653993 249
186 3300005338 Ga0068868_100009397 Ga0068868_1000093975 249
187 3300005347 Ga0070668_100075524 Ga0070668_1000755242 249
188 3300005355 Ga0070671_100240329 Ga0070671_1002403293 249
189 3300005356 Ga0070674_100059228 Ga0070674_1000592283 249
190 3300005356 Ga0070674_100097969 Ga0070674_1000979691 249
191 3300005367 Ga0070667_100163057 Ga0070667_1001630572 249
192 3300005456 Ga0070678_100015125 Ga0070678_1000151251 249
193 3300005459 Ga0068867_100236433 Ga0068867_1002364332 249
194 3300005539 Ga0068853_100017373 Ga0068853_1000173734 249
195 3300005539 Ga0068853_100073505 Ga0068853_1000735055 249
196 3300005543 Ga0070672_100251213 Ga0070672_1002512131 249
197 3300005548 Ga0070665_100040237 Ga0070665_1000402372 249
198 3300005577 Ga0068857_100011342 Ga0068857_1000113424 249
199 3300005578 Ga0068854_100069441 Ga0068854_1000694412 249
200 3300005617 Ga0068859_100019662 Ga0068859_1000196627 249
201 3300005617 Ga0068859_100252624 Ga0068859_1002526243 249
202 3300005618 Ga0068864_100318431 Ga0068864_1003184311 249
203 3300005718 Ga0068866_10025131 Ga0068866_100251314 249
204 3300005719 Ga0068861_100089240 Ga0068861_1000892402 249
205 3300005840 Ga0068870_10133058 Ga0068870_101330582 249
206 3300005841 Ga0068863_100005895 Ga0068863_1000058953 249
207 3300005843 Ga0068860_100054664 Ga0068860_1000546642 249
208 3300005844 Ga0068862_100139776 Ga0068862_1001397762 249
209 3300005844 Ga0068862_100649443 Ga0068862_1006494431 249
210 3300006237 Ga0097621_100006936 Ga0097621_1000069363 249
211 3300006237 Ga0097621_100161264 Ga0097621_1001612642 249
212 3300006358 Ga0068871_100004752 Ga0068871_1000047522 249
213 3300006881 Ga0068865_100004371 Ga0068865_1000043716 249
214 3300006931 Ga0097620_100019662 Ga0097620_1000196627 249
215 3300009094 Ga0111539_10416162 Ga0111539_104161622 249
216 3300009147 Ga0114129_11078157 Ga0114129_110781571 249
217 3300009148 Ga0105243_10113433 Ga0105243_101134333 249
218 3300009176 Ga0105242_10032547 Ga0105242_100325474 249
219 3300009553 Ga0105249_10000561 Ga0105249_100005613 249
220 3300009553 Ga0105249_10028733 Ga0105249_100287333 249
221 3300011119 Ga0105246_10001022 Ga0105246_1000102211 249
222 3300014325 Ga0163163_10411306 Ga0163163_104113062 249
223 3300025292 Ga0209676_1001637 Ga0209676_10016378 249
224 3300025298 Ga0209050_1003160 Ga0209050_10031605 249
225 3300025298 Ga0209050_1004804 Ga0209050_10048046 249
226 3300025315 Ga0207697_10032222 Ga0207697_100322223 249
227 3300025893 Ga0207682_10093575 Ga0207682_100935752 249
228 3300025899 Ga0207642_10030396 Ga0207642_100303962 249
229 3300025903 Ga0207680_10056896 Ga0207680_100568963 249
230 3300025907 Ga0207645_10000356 Ga0207645_1000035613 249
231 3300025908 Ga0207643_10022888 Ga0207643_100228882 249
232 3300025923 Ga0207681_10576562 Ga0207681_105765621 249
233 3300025925 Ga0207650_10002639 Ga0207650_100026396 249
234 3300025925 Ga0207650_10143353 Ga0207650_101433532 249
235 3300025926 Ga0207659_10430437 Ga0207659_104304372 249
236 3300025933 Ga0207706_10048592 Ga0207706_100485923 249
237 3300025934 Ga0207686_10446408 Ga0207686_104464081 249
238 3300025937 Ga0207669_10039719 Ga0207669_100397192 249
239 3300025937 Ga0207669_10546400 Ga0207669_105464001 249
240 3300025938 Ga0207704_10460093 Ga0207704_104600932 249
241 3300025940 Ga0207691_10002055 Ga0207691_100020558 249
242 3300025942 Ga0207689_10006221 Ga0207689_100062212 249
243 3300025942 Ga0207689_10007013 Ga0207689_100070132 249
244 3300025942 Ga0207689_10009783 Ga0207689_100097833 249
245 3300025960 Ga0207651_10040279 Ga0207651_100402792 249
246 3300025961 Ga0207712_10014775 Ga0207712_100147752 249
247 3300025972 Ga0207668_10647949 Ga0207668_106479491 249
248 3300026023 Ga0207677_10014240 Ga0207677_100142403 249
249 3300026041 Ga0207639_10013035 Ga0207639_100130355 249
250 3300026088 Ga0207641_10010223 Ga0207641_100102239 249
251 3300026089 Ga0207648_10003234 Ga0207648_100032342 249
252 3300026095 Ga0207676_10270649 Ga0207676_102706491 249
253 3300026116 Ga0207674_10025245 Ga0207674_100252453 249
254 3300026116 Ga0207674_10291705 Ga0207674_102917052 249
255 3300026118 Ga0207675_100085657 Ga0207675_1000856572 249
256 3300026121 Ga0207683_10001338 Ga0207683_1000133812 249
257 3300028379 Ga0268266_10741748 Ga0268266_107417481 249
258 3300028380 Ga0268265_10218766 Ga0268265_102187662 249
259 3300028381 Ga0268264_10018005 Ga0268264_100180052 249
260 3300028381 Ga0268264_10062834 Ga0268264_100628342 249
261 3300028381 Ga0268264_10289189 Ga0268264_102891892 249
262 3300028794 Ga0307515_10000031 Ga0307515_10000031110 249
263 3300031456 Ga0307513_10059019 Ga0307513_100590193 249
264 3300031911 Ga0307412_10043912 Ga0307412_100439122 249
265 3300032004 Ga0307414_10136441 Ga0307414_101364412 249
266 3300042876 Ga0451577_0000030 Ga0451577_0000030_386202_386984 249
267 3300042876 Ga0451577_0033529 Ga0451577_0033529_2138_2893 249
268 3300044673 Ga0453683_0000040 Ga0453683_0000040_110263_111018 249
269 3300044673 Ga0453683_0043678 Ga0453683_0043678_154_909 249
270 3300044673 Ga0453683_0184518 Ga0453683_0184518_485_1267 249
271 3300044712 Ga0453684_0000461 Ga0453684_0000461_4440_5222 249
272 3300044712 Ga0453684_0019831 Ga0453684_0019831_6770_7525 249
273 3300044712 Ga0453684_0701190 Ga0453684_0701190_214_969 249
274 3300045051 Ga0451576_0000172 Ga0451576_0000172_157141_157923 249
275 3300045051 Ga0451576_0028185 Ga0451576_0028185_4571_5326 249
276 3300045051 Ga0451576_0477756 Ga0451576_0477756_449_1204 249
277 3300046460 Ga0495638_0000006 Ga0495638_0000006_623823_624581 249
278 3300046616 Ga0495668_0000023 Ga0495668_0000023_56313_57095 249
279 3300053153 Ga0500616_0000082 Ga0500616_0000082_36729_37487 249
280 3300053727 Ga0500611_000003 Ga0500611_000003_279248_279997 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

33

142

0.97

PF04397

LytTR

LytTr DNA-binding domain

179

274

0.94

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pLDDT pTM Quality
80 0.49 Low
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Predicted Structure (AlphaFold2)

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Map