F383496

General Info

Members Datasets Scaffolds Average Seq Length
280 188 560 221

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100218469|Ga0070714_1002184692
Length 242
Sequence MNAEWTPELRARAQVHAALGEPARLAIVDRLVLGDASPTELGQYLGLPSNLLAHHLKLLEQAGVVERSRSEGDRRRTYLRLRPAALAGLQPAGRLAAPRVVFVCTHNSARSQLAAAMWNDHSPVPATSAGTHPAPRVHPGAVAVARRRNLALVPAPPRHVRDVLDPADLVVTVCDSAHEELATGSMGVAVGRPGLHWSIPDPVTADDPAAFDNVVDELTDRITRLTPAVHAVPEPKDQERSS

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
117 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
121 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
122 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
123 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
127 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
128 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
129 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
130 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
131 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
132 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
133 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
134 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
141 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
142 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 2501939600 Micromonospora sp. L5 Isolate Unclassified
171 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
172 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
173 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
174 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
175 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
176 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
177 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
178 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
179 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
180 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
181 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
182 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
183 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
184 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
185 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
186 649633069 Micromonospora sp. L5 Isolate Unclassified
187 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
188 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.86
Metatranscriptomes 0.36
Isolates 6.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.43
Nodule 0
Rhizoplane 6.43
Rhizosphere 83.93
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100218469 3300005435 Bacteria 1751
2 rootH2_10072995 3300003320 Bacteria 4883
3 rootL2_10293080 3300003322 Bacteria 1041
4 rootH1_10143283 3300003323 Bacteria 1566
5 Ga0070658_10422200 3300005327 Bacteria 1147
6 Ga0070658_10452051 3300005327 Bacteria 1107
7 Ga0068869_100090715 3300005334 Bacteria 2298
8 Ga0068869_100757316 3300005334 Bacteria 832
9 Ga0070666_10217213 3300005335 Bacteria 1348
10 Ga0070680_100170913 3300005336 Bacteria 1829
11 Ga0070682_100022156 3300005337 Bacteria 3759
12 Ga0068868_100615972 3300005338 Bacteria 963
13 Ga0070689_100104318 3300005340 Bacteria 2248
14 Ga0070691_10009567 3300005341 Bacteria 4425
15 Ga0070692_10069266 3300005345 Bacteria 1876
16 Ga0070668_100216791 3300005347 Bacteria 1577
17 Ga0070671_100001316 3300005355 Bacteria 18657
18 Ga0070671_100115101 3300005355 Bacteria 2260
19 Ga0070688_100078689 3300005365 Bacteria 2128
20 Ga0070659_100034326 3300005366 Bacteria 3945
21 Ga0070703_10064544 3300005406 Bacteria 1207
22 Ga0070709_10012169 3300005434 Bacteria 4811
23 Ga0070709_10146780 3300005434 Bacteria 1626
24 Ga0070714_100000540 3300005435 Bacteria 27267
25 Ga0070714_100056915 3300005435 Bacteria 3345
26 Ga0070714_100115406 3300005435 Bacteria 2383
27 Ga0070714_100189758 3300005435 Bacteria 1874
28 Ga0070714_100248096 3300005435 Bacteria 1645
29 Ga0070713_100057364 3300005436 Bacteria 3242
30 Ga0070713_100064276 3300005436 Bacteria 3079
31 Ga0070713_100149174 3300005436 Bacteria 2078
32 Ga0070713_100174347 3300005436 Bacteria 1928
33 Ga0070713_100376285 3300005436 Bacteria 1322
34 Ga0070713_100465245 3300005436 Bacteria 1189
35 Ga0070710_10019508 3300005437 Bacteria 3504
36 Ga0070710_10021511 3300005437 Bacteria 3363
37 Ga0070711_100074131 3300005439 Bacteria 2406
38 Ga0070711_100116977 3300005439 Bacteria 1965
39 Ga0070711_100265800 3300005439 Bacteria 1352
40 Ga0070705_100039803 3300005440 Bacteria 2670
41 Ga0070694_100063846 3300005444 Bacteria 2519
42 Ga0070663_100226693 3300005455 Bacteria 1469
43 Ga0068867_100332381 3300005459 Bacteria 1262
44 Ga0070684_100048590 3300005535 Bacteria 3680
45 Ga0070684_100226497 3300005535 Bacteria 1706
46 Ga0070697_100158265 3300005536 Bacteria 1913
47 Ga0070697_100259279 3300005536 Bacteria 1488
48 Ga0068853_100233666 3300005539 Bacteria 1683
49 Ga0070672_100062482 3300005543 Bacteria 2939
50 Ga0070693_100076533 3300005547 Bacteria 1984
51 Ga0070665_100062479 3300005548 Bacteria 3734
52 Ga0068855_100115262 3300005563 Bacteria 3080
53 Ga0070664_100488030 3300005564 Bacteria 1134
54 Ga0068857_100081129 3300005577 Bacteria 2896
55 Ga0068857_100164207 3300005577 Bacteria 2016
56 Ga0068857_100367712 3300005577 Bacteria 1334
57 Ga0068854_100079870 3300005578 Bacteria 2413
58 Ga0068856_100182943 3300005614 Bacteria 2109
59 Ga0068856_100392511 3300005614 Bacteria 1407
60 Ga0070702_100059978 3300005615 Bacteria 2210
61 Ga0068852_100195373 3300005616 Bacteria 1912
62 Ga0068866_10024945 3300005718 Bacteria 2805
63 Ga0068870_10059008 3300005840 Bacteria 2056
64 Ga0068863_100158413 3300005841 Bacteria 2168
65 Ga0068858_100000429 3300005842 Bacteria 43742
66 Ga0068858_100089541 3300005842 Bacteria 2863
67 Ga0068858_100092826 3300005842 Bacteria 2809
68 Ga0068860_100125537 3300005843 Bacteria 2459
69 Ga0081455_10045747 3300005937 Bacteria 3805
70 Ga0081455_10045956 3300005937 Bacteria 3794
71 Ga0081455_10069644 3300005937 Bacteria 2924
72 Ga0081539_10003765 3300005985 Bacteria 17969
73 Ga0081539_10008348 3300005985 Bacteria 9050
74 Ga0070717_10016666 3300006028 Bacteria 5701
75 Ga0070717_10046930 3300006028 Bacteria 3536
76 Ga0070717_10084851 3300006028 Bacteria 2664
77 Ga0070717_10125446 3300006028 Bacteria 2203
78 Ga0070717_10161110 3300006028 Bacteria 1946
79 Ga0070717_10181274 3300006028 Bacteria 1836
80 Ga0070717_10374629 3300006028 Bacteria 1276
81 Ga0075365_10147153 3300006038 Bacteria 1637
82 Ga0075364_10001747 3300006051 Bacteria 11983
83 Ga0075364_10021910 3300006051 Bacteria 4030
84 Ga0075432_10210252 3300006058 Unclassified 774
85 Ga0070716_100026977 3300006173 Bacteria 3080
86 Ga0070716_100089140 3300006173 Bacteria 1863
87 Ga0070712_100031376 3300006175 Bacteria 3579
88 Ga0070712_100037362 3300006175 Bacteria 3310
89 Ga0070712_100137370 3300006175 Bacteria 1860
90 Ga0070712_100268377 3300006175 Bacteria 1370
91 Ga0075428_100004290 3300006844 Bacteria 15702
92 Ga0075428_100254669 3300006844 Bacteria 1891
93 Ga0075428_100321105 3300006844 Bacteria 1664
94 Ga0075428_100359205 3300006844 Bacteria 1563
95 Ga0075430_100115768 3300006846 Bacteria 2234
96 Ga0075430_100260211 3300006846 Bacteria 1437
97 Ga0075431_100008237 3300006847 Bacteria 10422
98 Ga0075431_100009212 3300006847 Bacteria 9906
99 Ga0075431_100302271 3300006847 Bacteria 1616
100 Ga0075431_100564888 3300006847 Bacteria 1124
101 Ga0075433_10044067 3300006852 Bacteria 3876
102 Ga0075429_100191378 3300006880 Bacteria 1792
103 Ga0075435_100049392 3300007076 Bacteria 3383
104 Ga0105240_10249060 3300009093 Bacteria 2056
105 Ga0111539_10547026 3300009094 Bacteria 1349
106 Ga0105245_10080603 3300009098 Bacteria 2974
107 Ga0105245_10277554 3300009098 Bacteria 1637
108 Ga0105247_10036773 3300009101 Bacteria 2985
109 Ga0105247_10037754 3300009101 Bacteria 2947
110 Ga0114129_10009335 3300009147 Bacteria 13991
111 Ga0114129_10509058 3300009147 Bacteria 1571
112 Ga0105241_10087711 3300009174 Bacteria 2449
113 Ga0105241_10459702 3300009174 Bacteria 1127
114 Ga0105242_10066921 3300009176 Bacteria 2968
115 Ga0105248_10222448 3300009177 Bacteria 2125
116 Ga0105237_10097610 3300009545 Bacteria 2929
117 Ga0105237_10806372 3300009545 Bacteria 946
118 Ga0105239_10180342 3300010375 Bacteria 2363
119 Ga0157373_10214622 3300013100 Bacteria 1357
120 Ga0157370_10037692 3300013104 Bacteria 4684
121 Ga0157369_10086309 3300013105 Bacteria 3351
122 Ga0157369_10256684 3300013105 Bacteria 1823
123 Ga0157369_10709108 3300013105 Bacteria 1036
124 Ga0157374_10064754 3300013296 Bacteria 3432
125 Ga0157378_10080321 3300013297 Bacteria 2946
126 Ga0157375_10806574 3300013308 Bacteria 1087
127 Ga0163163_10004397 3300014325 Bacteria 12011
128 Ga0163163_10349515 3300014325 Bacteria 1534
129 Ga0163163_10478551 3300014325 Bacteria 1306
130 Ga0157380_10068010 3300014326 Bacteria 2870
131 Ga0157377_10028518 3300014745 Bacteria 3005
132 Ga0157379_10001609 3300014968 Bacteria 18631
133 Ga0157379_10165879 3300014968 Bacteria 1993
134 Ga0157376_10045970 3300014969 Bacteria 3597
135 Ga0163161_10121773 3300017792 Bacteria 1961
136 Ga0206354_10553101 3300020081 Bacteria 853
137 Ga0207653_10030165 3300025885 Bacteria 1749
138 Ga0207692_10052446 3300025898 Bacteria 2073
139 Ga0207692_10156221 3300025898 Bacteria 1311
140 Ga0207710_10018887 3300025900 Bacteria 2935
141 Ga0207647_10062937 3300025904 Bacteria 2258
142 Ga0207699_10004751 3300025906 Bacteria 6488
143 Ga0207699_10019232 3300025906 Bacteria 3637
144 Ga0207643_10058862 3300025908 Bacteria 2191
145 Ga0207693_10025458 3300025915 Bacteria 4692
146 Ga0207693_10074880 3300025915 Bacteria 2651
147 Ga0207693_10148026 3300025915 Bacteria 1846
148 Ga0207693_10338807 3300025915 Bacteria 1177
149 Ga0207663_10150073 3300025916 Bacteria 1634
150 Ga0207663_10162569 3300025916 Bacteria 1578
151 Ga0207663_10214439 3300025916 Bacteria 1397
152 Ga0207660_10176117 3300025917 Bacteria 1658
153 Ga0207657_10040905 3300025919 Bacteria 4103
154 Ga0207646_10315926 3300025922 Bacteria 1411
155 Ga0207700_10030084 3300025928 Bacteria 3841
156 Ga0207700_10044680 3300025928 Bacteria 3263
157 Ga0207700_10107688 3300025928 Bacteria 2237
158 Ga0207664_10041222 3300025929 Bacteria 3596
159 Ga0207664_10079286 3300025929 Bacteria 2665
160 Ga0207664_10083265 3300025929 Bacteria 2607
161 Ga0207644_10005840 3300025931 Bacteria 8018
162 Ga0207690_10309784 3300025932 Bacteria 1238
163 Ga0207709_10088422 3300025935 Bacteria 2017
164 Ga0207669_10110962 3300025937 Bacteria 1838
165 Ga0207665_10001127 3300025939 Bacteria 17970
166 Ga0207689_10112468 3300025942 Bacteria 2238
167 Ga0207661_10078749 3300025944 Bacteria 2714
168 Ga0207679_10166493 3300025945 Bacteria 1810
169 Ga0207679_10816461 3300025945 Bacteria 851
170 Ga0207677_10552383 3300026023 Bacteria 1004
171 Ga0207703_10000015 3300026035 Bacteria 287079
172 Ga0207703_10595061 3300026035 Bacteria 1046
173 Ga0207639_10079130 3300026041 Bacteria 2597
174 Ga0207678_10074954 3300026067 Bacteria 2899
175 Ga0207678_10236566 3300026067 Bacteria 1564
176 Ga0207708_10265090 3300026075 Bacteria 1387
177 Ga0207702_10005258 3300026078 Bacteria 11362
178 Ga0207702_10167514 3300026078 Bacteria 2011
179 Ga0207676_10214411 3300026095 Bacteria 1710
180 Ga0207674_10017225 3300026116 Bacteria 7883
181 Ga0207674_10159283 3300026116 Bacteria 2212
182 Ga0207674_10301300 3300026116 Bacteria 1552
183 Ga0207675_100045735 3300026118 Bacteria 4089
184 Ga0207683_10011916 3300026121 Bacteria 7419
185 Ga0207698_10033868 3300026142 Bacteria 3716
186 Ga0268266_10317129 3300028379 Bacteria 1458
187 Ga0268265_10165949 3300028380 Bacteria 1882
188 Ga0265338_10060314 3300028800 Bacteria 3334
189 Ga0265338_10171411 3300028800 Bacteria 1664
190 Ga0307511_10098252 3300030521 Bacteria 1939
191 Ga0265325_10047180 3300031241 Bacteria 2231
192 Ga0307408_100564559 3300031548 Bacteria 1006
193 Ga0307508_10005848 3300031616 Bacteria 11618
194 Ga0307508_10172550 3300031616 Bacteria 1766
195 Ga0265342_10071945 3300031712 Bacteria 2014
196 Ga0316578_10059996 3300031728 Bacteria 2238
197 Ga0307413_10000765 3300031824 Bacteria 11115
198 Ga0307413_10165718 3300031824 Bacteria 1558
199 Ga0307406_10246661 3300031901 Bacteria 1343
200 Ga0307415_100181984 3300032126 Bacteria 1650
201 Ga0373938_0010774 3300034957 Bacteria 1688
202 Ga0373951_0018021 3300035091 Bacteria 1602
203 Ga0373952_0027729 3300035092 Bacteria 1238
204 Ga0373932_0016205 3300035112 Bacteria 1899
205 Ga0373954_0026650 3300035118 Bacteria 2650
206 Ga0373943_0165105 3300035170 Bacteria 1208
207 Ga0316574_0248310 3300035398 Bacteria 1137
208 Ga0373931_0097503 3300035691 Bacteria 1648
209 Ga0316582_0124088 3300036647 Bacteria 1731
210 Ga0395899_0064482 3300037312 Bacteria 2693
211 Ga0395899_0435775 3300037312 Bacteria 861
212 Ga0395900_0002127 3300037418 Bacteria 22170
213 Ga0395900_0135255 3300037418 Bacteria 2525
214 Ga0395898_0059598 3300037466 Bacteria 3712
215 Ga0395898_0060277 3300037466 Bacteria 3688
216 Ga0395898_0626548 3300037466 Bacteria 1018
217 Ga0395905_0002509 3300037471 Bacteria 20276
218 Ga0395905_0325513 3300037471 Bacteria 1427
219 Ga0395901_0022022 3300038443 Bacteria 6532
220 Ga0395901_0056578 3300038443 Bacteria 4080
221 Ga0400488_44666 3300038741 Bacteria 10143
222 Ga0450888_007167 3300042126 Bacteria 1226
223 Ga0495651_0049824 3300046462 Bacteria 3232
224 Ga0495608_0250720 3300046511 Bacteria 1104
225 Ga0495588_0168589 3300046674 Bacteria 1158
226 Ga0495680_0214746 3300047322 Bacteria 1375
227 Ga0496101_0044109 3300048904 Bacteria 3190
228 Ga0496102_0037170 3300048905 Bacteria 4391
229 Ga0496104_0077901 3300048907 Bacteria 3158
230 Ga0496105_0050449 3300048908 Bacteria 3437
231 Ga0496105_0078052 3300048908 Bacteria 2734
232 Ga0496106_0015130 3300048909 Bacteria 5710
233 Ga0496106_0093201 3300048909 Bacteria 2327
234 Ga0496108_0087796 3300048911 Bacteria 2641
235 Ga0496108_0500664 3300048911 Bacteria 1061
236 Ga0496109_0046577 3300048912 Bacteria 3939
237 Ga0496109_0115136 3300048912 Bacteria 2501
238 Ga0496109_0314333 3300048912 Bacteria 1478
239 Ga0496110_0107913 3300048913 Bacteria 2499
240 Ga0496111_0031532 3300048914 Bacteria 3776
241 Ga0496111_0094064 3300048914 Bacteria 2198
242 Ga0496113_0126568 3300048916 Bacteria 2001
243 Ga0496114_0013605 3300048917 Bacteria 6525
244 Ga0496115_0735387 3300048918 Bacteria 773
245 Ga0496119_0023238 3300048922 Bacteria 4406
246 Ga0496120_0133560 3300048923 Bacteria 1268
247 Ga0496121_0026801 3300048924 Bacteria 5415
248 nmdc:mga00v17_2633_c1 3300050491 Bacteria 9212
249 nmdc:mga05p37_198609_c1 3300050507 Bacteria 2431
250 nmdc:mga09592_47813_c1 3300050508 Bacteria 3606
251 nmdc:mga0qj67_121805_c1 3300050509 Bacteria 2110
252 nmdc:mga0qj67_20741_c1 3300050509 Bacteria 5033
253 nmdc:mga06r32_173802_c1 3300050510 Bacteria 2138
254 nmdc:mga06r32_329302_c1 3300050510 Bacteria 1512
255 nmdc:mga06r32_361968_c1 3300050510 Bacteria 1434
256 nmdc:mga06r32_57379_c1 3300050510 Bacteria 3740
257 nmdc:mga06r32_6442_c1 3300050510 Bacteria 10544
258 nmdc:mga08y16_427423_c1 3300050511 Bacteria 1353
259 nmdc:mga0n895_89132_c1 3300050512 Bacteria 3086
260 nmdc:mga0rr50_47182_c1 3300050513 Bacteria 3176
261 nmdc:mga0a205_136341_c1 3300050515 Bacteria 2355
262 2501940195 2501939600 Bacteria 6907073
263 2623590092 2622736626 Bacteria 7181580
264 2644456254 2643221681 Bacteria 3707866
265 2676480998 2675903059 Bacteria 8644972
266 2753265936 2751185782 Bacteria 11227053
267 2795797143 2795385472 Bacteria 6627535
268 2855677521 2855676851 Bacteria 7063653
269 2856863477 2856858025 Bacteria 7255264
270 2858853364 2858848962 Bacteria 6963058
271 2858891418 2858888857 Bacteria 7060307
272 2858901546 2858895516 Bacteria 7378898
273 2869053995 2869048445 Bacteria 6875584
274 2870787331 2870782633 Bacteria 9624083
275 2880502402 2880495981 Bacteria 7340502
276 2884996717 2884994152 Bacteria 4492978
277 2915363732 2915358134 Bacteria 6050864
278 649814758 649633069 Bacteria 6962533
279 8003871953 8003870546 Bacteria 7396674
280 8055181153 8055172936 Bacteria 9305943
281 Ga0070714_100218469
282 rootH2_10072995
283 rootL2_10293080
284 rootH1_10143283
285 Ga0070658_10422200
286 Ga0070658_10452051
287 Ga0068869_100090715
288 Ga0068869_100757316
289 Ga0070666_10217213
290 Ga0070680_100170913
291 Ga0070682_100022156
292 Ga0068868_100615972
293 Ga0070689_100104318
294 Ga0070691_10009567
295 Ga0070692_10069266
296 Ga0070668_100216791
297 Ga0070671_100001316
298 Ga0070671_100115101
299 Ga0070688_100078689
300 Ga0070659_100034326
301 Ga0070703_10064544
302 Ga0070709_10012169
303 Ga0070709_10146780
304 Ga0070714_100000540
305 Ga0070714_100056915
306 Ga0070714_100115406
307 Ga0070714_100189758
308 Ga0070714_100248096
309 Ga0070713_100057364
310 Ga0070713_100064276
311 Ga0070713_100149174
312 Ga0070713_100174347
313 Ga0070713_100376285
314 Ga0070713_100465245
315 Ga0070710_10019508
316 Ga0070710_10021511
317 Ga0070711_100074131
318 Ga0070711_100116977
319 Ga0070711_100265800
320 Ga0070705_100039803
321 Ga0070694_100063846
322 Ga0070663_100226693
323 Ga0068867_100332381
324 Ga0070684_100048590
325 Ga0070684_100226497
326 Ga0070697_100158265
327 Ga0070697_100259279
328 Ga0068853_100233666
329 Ga0070672_100062482
330 Ga0070693_100076533
331 Ga0070665_100062479
332 Ga0068855_100115262
333 Ga0070664_100488030
334 Ga0068857_100081129
335 Ga0068857_100164207
336 Ga0068857_100367712
337 Ga0068854_100079870
338 Ga0068856_100182943
339 Ga0068856_100392511
340 Ga0070702_100059978
341 Ga0068852_100195373
342 Ga0068866_10024945
343 Ga0068870_10059008
344 Ga0068863_100158413
345 Ga0068858_100000429
346 Ga0068858_100089541
347 Ga0068858_100092826
348 Ga0068860_100125537
349 Ga0081455_10045747
350 Ga0081455_10045956
351 Ga0081455_10069644
352 Ga0081539_10003765
353 Ga0081539_10008348
354 Ga0070717_10016666
355 Ga0070717_10046930
356 Ga0070717_10084851
357 Ga0070717_10125446
358 Ga0070717_10161110
359 Ga0070717_10181274
360 Ga0070717_10374629
361 Ga0075365_10147153
362 Ga0075364_10001747
363 Ga0075364_10021910
364 Ga0075432_10210252
365 Ga0070716_100026977
366 Ga0070716_100089140
367 Ga0070712_100031376
368 Ga0070712_100037362
369 Ga0070712_100137370
370 Ga0070712_100268377
371 Ga0075428_100004290
372 Ga0075428_100254669
373 Ga0075428_100321105
374 Ga0075428_100359205
375 Ga0075430_100115768
376 Ga0075430_100260211
377 Ga0075431_100008237
378 Ga0075431_100009212
379 Ga0075431_100302271
380 Ga0075431_100564888
381 Ga0075433_10044067
382 Ga0075429_100191378
383 Ga0075435_100049392
384 Ga0105240_10249060
385 Ga0111539_10547026
386 Ga0105245_10080603
387 Ga0105245_10277554
388 Ga0105247_10036773
389 Ga0105247_10037754
390 Ga0114129_10009335
391 Ga0114129_10509058
392 Ga0105241_10087711
393 Ga0105241_10459702
394 Ga0105242_10066921
395 Ga0105248_10222448
396 Ga0105237_10097610
397 Ga0105237_10806372
398 Ga0105239_10180342
399 Ga0157373_10214622
400 Ga0157370_10037692
401 Ga0157369_10086309
402 Ga0157369_10256684
403 Ga0157369_10709108
404 Ga0157374_10064754
405 Ga0157378_10080321
406 Ga0157375_10806574
407 Ga0163163_10004397
408 Ga0163163_10349515
409 Ga0163163_10478551
410 Ga0157380_10068010
411 Ga0157377_10028518
412 Ga0157379_10001609
413 Ga0157379_10165879
414 Ga0157376_10045970
415 Ga0163161_10121773
416 Ga0206354_10553101
417 Ga0207653_10030165
418 Ga0207692_10052446
419 Ga0207692_10156221
420 Ga0207710_10018887
421 Ga0207647_10062937
422 Ga0207699_10004751
423 Ga0207699_10019232
424 Ga0207643_10058862
425 Ga0207693_10025458
426 Ga0207693_10074880
427 Ga0207693_10148026
428 Ga0207693_10338807
429 Ga0207663_10150073
430 Ga0207663_10162569
431 Ga0207663_10214439
432 Ga0207660_10176117
433 Ga0207657_10040905
434 Ga0207646_10315926
435 Ga0207700_10030084
436 Ga0207700_10044680
437 Ga0207700_10107688
438 Ga0207664_10041222
439 Ga0207664_10079286
440 Ga0207664_10083265
441 Ga0207644_10005840
442 Ga0207690_10309784
443 Ga0207709_10088422
444 Ga0207669_10110962
445 Ga0207665_10001127
446 Ga0207689_10112468
447 Ga0207661_10078749
448 Ga0207679_10166493
449 Ga0207679_10816461
450 Ga0207677_10552383
451 Ga0207703_10000015
452 Ga0207703_10595061
453 Ga0207639_10079130
454 Ga0207678_10074954
455 Ga0207678_10236566
456 Ga0207708_10265090
457 Ga0207702_10005258
458 Ga0207702_10167514
459 Ga0207676_10214411
460 Ga0207674_10017225
461 Ga0207674_10159283
462 Ga0207674_10301300
463 Ga0207675_100045735
464 Ga0207683_10011916
465 Ga0207698_10033868
466 Ga0268266_10317129
467 Ga0268265_10165949
468 Ga0265338_10060314
469 Ga0265338_10171411
470 Ga0307511_10098252
471 Ga0265325_10047180
472 Ga0307408_100564559
473 Ga0307508_10005848
474 Ga0307508_10172550
475 Ga0265342_10071945
476 Ga0316578_10059996
477 Ga0307413_10000765
478 Ga0307413_10165718
479 Ga0307406_10246661
480 Ga0307415_100181984
481 Ga0373938_0010774
482 Ga0373951_0018021
483 Ga0373952_0027729
484 Ga0373932_0016205
485 Ga0373954_0026650
486 Ga0373943_0165105
487 Ga0316574_0248310
488 Ga0373931_0097503
489 Ga0316582_0124088
490 Ga0395899_0064482
491 Ga0395899_0435775
492 Ga0395900_0002127
493 Ga0395900_0135255
494 Ga0395898_0059598
495 Ga0395898_0060277
496 Ga0395898_0626548
497 Ga0395905_0002509
498 Ga0395905_0325513
499 Ga0395901_0022022
500 Ga0395901_0056578
501 Ga0400488_44666
502 Ga0450888_007167
503 Ga0495651_0049824
504 Ga0495608_0250720
505 Ga0495588_0168589
506 Ga0495680_0214746
507 Ga0496101_0044109
508 Ga0496102_0037170
509 Ga0496104_0077901
510 Ga0496105_0050449
511 Ga0496105_0078052
512 Ga0496106_0015130
513 Ga0496106_0093201
514 Ga0496108_0087796
515 Ga0496108_0500664
516 Ga0496109_0046577
517 Ga0496109_0115136
518 Ga0496109_0314333
519 Ga0496110_0107913
520 Ga0496111_0031532
521 Ga0496111_0094064
522 Ga0496113_0126568
523 Ga0496114_0013605
524 Ga0496115_0735387
525 Ga0496119_0023238
526 Ga0496120_0133560
527 Ga0496121_0026801
528 nmdc:mga00v17_2633_c1
529 nmdc:mga05p37_198609_c1
530 nmdc:mga09592_47813_c1
531 nmdc:mga0qj67_121805_c1
532 nmdc:mga0qj67_20741_c1
533 nmdc:mga06r32_173802_c1
534 nmdc:mga06r32_329302_c1
535 nmdc:mga06r32_361968_c1
536 nmdc:mga06r32_57379_c1
537 nmdc:mga06r32_6442_c1
538 nmdc:mga08y16_427423_c1
539 nmdc:mga0n895_89132_c1
540 nmdc:mga0rr50_47182_c1
541 nmdc:mga0a205_136341_c1
542 2501940195
543 2623590092
544 2644456254
545 2676480998
546 2753265936
547 2795797143
548 2855677521
549 2856863477
550 2858853364
551 2858891418
552 2858901546
553 2869053995
554 2870787331
555 2880502402
556 2884996717
557 2915363732
558 649814758
559 8003871953
560 8055181153

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12840

HTH_20

Helix-turn-helix domain

19

68

0.97

PF12802

MarR_2

MarR family

23

76

0.93

PF01451

LMWPc

Low molecular weight phosphotyrosine protein phosphatase

100

226

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a61-assembly2.cif.gz_C the crystal structure of transcriptional regulator tm0710 from thermotoga maritima 0.975 7 68
5yi0-assembly1.cif.gz_B structure of lactococcus lactis zitr, c30ah42a mutant 0.9735 7 73
5yi1-assembly1.cif.gz_A-2 structure of lactococcus lactis zitr, c30ah42a mutant in apo form 0.9576 9 74
5jlu-assembly1.cif.gz_A-2 crystal structure of adhesin competence repressor (adcr) from streptococcus pyogenes 0.9519 7 74
5yhz-assembly1.cif.gz_A-2 structure of lactococcus lactis zitr, e41a mutant 0.9484 8 74
ID Description Score Start End Superfamily
af_Q69XJ1_51_114_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9816 22 66 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9532 5 72 1.10.10.10
af_P32910_88_152_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9393 9 67 1.10.10.10
af_P9WMF1_6_143_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9377 9 73 1.10.10.10
af_P0ACR9_12_165_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9362 7 70 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A074TLP6-F1-model_v4 deleted 0.9844 3 66
AF-A0A0D8DJL0-F1-model_v4 HTH marR-type domain-containing protein 0.9827 8 68 GO:0003677
GO:0003700
GO:0006950
AF-S9SYM8-F1-model_v4 Transcriptional regulator 0.9795 7 68 GO:0003677
GO:0003700
AF-A0A6N7FL80-F1-model_v4 Metalloregulator ArsR/SmtB family transcription factor 0.9765 2 68 GO:0003700
AF-A0A248JWF6-F1-model_v4 MarR family transcriptional regulator 0.9748 7 73 GO:0003700

Map