F383360

General Info

Members Datasets Scaffolds Average Seq Length
279 175 272 306

Family's Representative Sequence

Representative Sequence 3300053125|Ga0500618_002634|Ga0500618_002634_482_1480
Length 332
Sequence MSDDTTRLSTPDAAVAPRRSKPAGLGRGLQALLGETRREEPLVQPVAPASGVPARVDVPRAVPVDSGLAMLPVSLIEPHPEQPRRHFDEAALDELAASIAARGVIQPVIVRPLPGGRYQLVAGERRWRAAQRAQLHEIPALVRTLTEREVMALALIENLQREDLNPIEEARAYQRLAEQESMTQVDIARMVDKSRSHVANIQRLLSLPDPVILLVERGDLSMGHARALIGSDDAGELATQAVAKGLSVREVEQMIRRRNKGEAAAATPRRARASDTADNADIAAVQAHLEEFLGLSVKITADADPRSGTVTIRYTTLDQLDLVCQRLTGGGI

Samples

Sample ID Description Type Environment
1 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
2 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
3 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
4 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
5 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
6 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
7 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
49 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
69 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
121 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
122 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
123 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
166 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
167 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
168 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
169 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
172 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
173 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
174 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
175 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.49
Metatranscriptomes 0
Isolates 2.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.56
Nodule 0
Rhizoplane 5.02
Rhizosphere 69.18
Stem 0
Stem Tuber 0
Unclassified 8.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10010540 3300002075 Bacteria 2055
2 JGI24751J29686_10000270 3300002459 Bacteria 20156
3 JGI25165J46597_1000210 3300003214 Bacteria 83572
4 Ga0055536_1002969 3300003781 Bacteria 9299
5 Ga0055536_1003971 3300003781 Bacteria 7745
6 Ga0055536_1004463 3300003781 Bacteria 7147
7 Ga0055530_10000054 3300003791 Bacteria 102159
8 Ga0055531_10000492 3300003794 Bacteria 36203
9 Ga0055531_10000860 3300003794 Bacteria 24890
10 Ga0055531_10038253 3300003794 Bacteria 1443
11 Ga0070658_10000811 3300005327 Bacteria 26743
12 Ga0070658_10035552 3300005327 Bacteria 4013
13 Ga0070658_10057200 3300005327 Bacteria 3172
14 Ga0070683_100122853 3300005329 Bacteria 2453
15 Ga0070690_100136105 3300005330 Bacteria 1664
16 Ga0070670_100079074 3300005331 Bacteria 2826
17 Ga0068869_100177664 3300005334 Bacteria 1667
18 Ga0070666_10027349 3300005335 Bacteria 3734
19 Ga0070680_100100574 3300005336 Bacteria 2400
20 Ga0070660_100017379 3300005339 Bacteria 5242
21 Ga0070660_100099163 3300005339 Bacteria 2306
22 Ga0070661_100021139 3300005344 Bacteria 4645
23 Ga0070669_100001402 3300005353 Bacteria 17394
24 Ga0070675_100167497 3300005354 Bacteria 1893
25 Ga0070671_100000005 3300005355 Bacteria 256547
26 Ga0070659_100006907 3300005366 Bacteria 8219
27 Ga0070659_100055239 3300005366 Bacteria 3129
28 Ga0070659_100070111 3300005366 Bacteria 2784
29 Ga0070659_100118968 3300005366 Bacteria 2138
30 Ga0070667_100017417 3300005367 Bacteria 5955
31 Ga0070667_100047529 3300005367 Bacteria 3610
32 Ga0070667_100205666 3300005367 Bacteria 1748
33 Ga0070662_100001873 3300005457 Bacteria 12885
34 Ga0070681_10014923 3300005458 Bacteria 7725
35 Ga0070679_100002486 3300005530 Bacteria 16705
36 Ga0070684_100124716 3300005535 Bacteria 2319
37 Ga0068853_100004207 3300005539 Bacteria 11105
38 Ga0068853_100021348 3300005539 Bacteria 5398
39 Ga0070665_100008001 3300005548 Bacteria 10708
40 Ga0070665_100054014 3300005548 Bacteria 4029
41 Ga0068855_100014258 3300005563 Bacteria 9575
42 Ga0068855_100023316 3300005563 Bacteria 7412
43 Ga0068855_100023687 3300005563 Bacteria 7351
44 Ga0068855_100024370 3300005563 Bacteria 7240
45 Ga0070664_100086450 3300005564 Bacteria 2710
46 Ga0068857_100007686 3300005577 Bacteria 9286
47 Ga0068857_100239994 3300005577 Bacteria 1659
48 Ga0068854_100001427 3300005578 Bacteria 14446
49 Ga0068856_100006838 3300005614 Bacteria 11160
50 Ga0068856_100011589 3300005614 Bacteria 8552
51 Ga0068856_100035045 3300005614 Bacteria 4918
52 Ga0068856_100070796 3300005614 Bacteria 3451
53 Ga0068852_100000052 3300005616 Bacteria 80329
54 Ga0068852_100000259 3300005616 Bacteria 35916
55 Ga0068852_100022941 3300005616 Bacteria 5015
56 Ga0068852_100095644 3300005616 Bacteria 2668
57 Ga0068859_100011785 3300005617 Bacteria 8785
58 Ga0068864_100004814 3300005618 Bacteria 11065
59 Ga0068863_100000287 3300005841 Bacteria 52189
60 Ga0068858_100004623 3300005842 Bacteria 13473
61 Ga0068858_100011491 3300005842 Bacteria 8356
62 Ga0068858_100095911 3300005842 Bacteria 2763
63 Ga0068860_100000089 3300005843 Bacteria 152667
64 Ga0068860_100000391 3300005843 Bacteria 57332
65 Ga0068860_100015808 3300005843 Bacteria 7369
66 Ga0068862_100000014 3300005844 Bacteria 251552
67 Ga0068862_100011016 3300005844 Bacteria 7471
68 Ga0075363_100008975 3300006048 Bacteria 4683
69 Ga0075364_10009428 3300006051 Bacteria 5857
70 Ga0075432_10019819 3300006058 Bacteria 2299
71 Ga0075369_10000161 3300006186 Bacteria 18992
72 Ga0075369_10022720 3300006186 Bacteria 2589
73 Ga0075366_10000262 3300006195 Bacteria 23232
74 Ga0097621_100084374 3300006237 Bacteria 2648
75 Ga0075370_10000195 3300006353 Bacteria 21283
76 Ga0075370_10037475 3300006353 Bacteria 2727
77 Ga0075370_10051057 3300006353 Bacteria 2346
78 Ga0097620_100011785 3300006931 Bacteria 8785
79 Ga0105240_10008968 3300009093 Bacteria 14218
80 Ga0105240_10037814 3300009093 Bacteria 6198
81 Ga0105247_10009265 3300009101 Bacteria 5980
82 Ga0105248_10109354 3300009177 Bacteria 3116
83 Ga0105238_10025625 3300009551 Bacteria 6011
84 Ga0105249_10000002 3300009553 Bacteria 376207
85 Ga0105246_10000074 3300011119 Bacteria 41753
86 Ga0157373_10034904 3300013100 Bacteria 3612
87 Ga0157371_10004577 3300013102 Bacteria 12020
88 Ga0157371_10079217 3300013102 Bacteria 2327
89 Ga0157370_10000417 3300013104 Bacteria 53666
90 Ga0157370_10004914 3300013104 Bacteria 15147
91 Ga0157369_10000384 3300013105 Bacteria 58625
92 Ga0157369_10054005 3300013105 Bacteria 4339
93 Ga0163162_10227109 3300013306 Bacteria 1997
94 Ga0157372_10047910 3300013307 Bacteria 4750
95 Ga0157372_10071411 3300013307 Bacteria 3909
96 Ga0157372_10194780 3300013307 Bacteria 2348
97 Ga0157380_10517326 3300014326 Bacteria 1163
98 Ga0157377_10250719 3300014745 Bacteria 1147
99 Ga0183363_1003 3300015690 Bacteria 421263
100 Ga0207427_101415 3300025231 Bacteria 8762
101 Ga0209026_1002460 3300025250 Bacteria 6938
102 Ga0209233_1000003 3300025261 Bacteria 1607366
103 Ga0209675_1000131 3300025291 Bacteria 102409
104 Ga0209676_1000746 3300025292 Bacteria 44094
105 Ga0209676_1000897 3300025292 Bacteria 37715
106 Ga0209676_1001134 3300025292 Bacteria 29190
107 Ga0209676_1021746 3300025292 Bacteria 2143
108 Ga0209025_1006029 3300025294 Bacteria 9601
109 Ga0209050_1000113 3300025298 Bacteria 209222
110 Ga0209050_1013837 3300025298 Bacteria 3542
111 Ga0209257_1000083 3300025304 Bacteria 296207
112 Ga0209257_1000126 3300025304 Bacteria 215705
113 Ga0209257_1000330 3300025304 Bacteria 99167
114 Ga0209257_1001563 3300025304 Bacteria 26461
115 Ga0207697_10016703 3300025315 Bacteria 3023
116 Ga0207697_10031807 3300025315 Bacteria 2159
117 Ga0207710_10009946 3300025900 Bacteria 3999
118 Ga0207647_10012727 3300025904 Bacteria 5847
119 Ga0207647_10047088 3300025904 Bacteria 2684
120 Ga0207647_10067907 3300025904 Bacteria 2159
121 Ga0207705_10000007 3300025909 Bacteria 597387
122 Ga0207705_10000639 3300025909 Bacteria 29235
123 Ga0207705_10055002 3300025909 Bacteria 2869
124 Ga0207707_10167181 3300025912 Bacteria 1922
125 Ga0207695_10004641 3300025913 Bacteria 18616
126 Ga0207660_10036714 3300025917 Bacteria 3408
127 Ga0207657_10000769 3300025919 Bacteria 33991
128 Ga0207657_10033183 3300025919 Bacteria 4655
129 Ga0207652_10002433 3300025921 Bacteria 15718
130 Ga0207652_10165751 3300025921 Bacteria 1981
131 Ga0207652_10323064 3300025921 Bacteria 1393
132 Ga0207652_10411062 3300025921 Bacteria 1221
133 Ga0207681_10000288 3300025923 Bacteria 37371
134 Ga0207694_10028354 3300025924 Bacteria 4268
135 Ga0207650_10425206 3300025925 Bacteria 1103
136 Ga0207644_10000008 3300025931 Bacteria 354219
137 Ga0207644_10006877 3300025931 Bacteria 7410
138 Ga0207690_10020727 3300025932 Bacteria 4066
139 Ga0207690_10038278 3300025932 Bacteria 3120
140 Ga0207690_10081583 3300025932 Bacteria 2260
141 Ga0207690_10181509 3300025932 Bacteria 1585
142 Ga0207706_10004634 3300025933 Bacteria 12890
143 Ga0207706_10024340 3300025933 Bacteria 5428
144 Ga0207667_10003313 3300025949 Bacteria 19874
145 Ga0207667_10022172 3300025949 Bacteria 7024
146 Ga0207667_10031444 3300025949 Bacteria 5731
147 Ga0207712_10000002 3300025961 Bacteria 706628
148 Ga0207640_10001366 3300025981 Bacteria 13199
149 Ga0207640_10203540 3300025981 Bacteria 1502
150 Ga0207658_10003639 3300025986 Bacteria 10882
151 Ga0207658_10437168 3300025986 Bacteria 1156
152 Ga0207703_10001303 3300026035 Bacteria 23079
153 Ga0207703_10136529 3300026035 Bacteria 2124
154 Ga0207639_10013378 3300026041 Bacteria 5743
155 Ga0207639_10035588 3300026041 Bacteria 3685
156 Ga0207702_10007061 3300026078 Bacteria 9605
157 Ga0207702_10032314 3300026078 Bacteria 4367
158 Ga0207702_10064756 3300026078 Bacteria 3129
159 Ga0207641_10000069 3300026088 Bacteria 154022
160 Ga0207676_10035961 3300026095 Bacteria 3764
161 Ga0207674_10021628 3300026116 Bacteria 6925
162 Ga0207674_10025900 3300026116 Bacteria 6243
163 Ga0207674_10086149 3300026116 Bacteria 3136
164 Ga0207698_10000036 3300026142 Bacteria 105391
165 Ga0207698_10000198 3300026142 Bacteria 37741
166 Ga0207698_10049731 3300026142 Bacteria 3193
167 Ga0207428_10135704 3300027907 Bacteria 1881
168 Ga0207428_10268693 3300027907 Bacteria 1268
169 Ga0268266_10007134 3300028379 Bacteria 10127
170 Ga0268266_10107272 3300028379 Bacteria 2470
171 Ga0268265_10000048 3300028380 Bacteria 178523
172 Ga0268265_10013560 3300028380 Bacteria 5540
173 Ga0268264_10000160 3300028381 Bacteria 152653
174 Ga0268264_10000439 3300028381 Bacteria 57339
175 Ga0265331_10012805 3300031250 Bacteria 4531
176 Ga0307513_10041863 3300031456 Bacteria 5050
177 Ga0307408_100184682 3300031548 Bacteria 1675
178 Ga0307413_10007575 3300031824 Bacteria 5054
179 Ga0307413_10047892 3300031824 Bacteria 2552
180 Ga0307406_10219757 3300031901 Bacteria 1411
181 Ga0307412_10164088 3300031911 Bacteria 1654
182 Ga0307412_10251610 3300031911 Bacteria 1372
183 Ga0307416_100018039 3300032002 Bacteria 4959
184 Ga0307414_10000212 3300032004 Bacteria 38895
185 Ga0307414_10007178 3300032004 Bacteria 6251
186 Ga0307414_10007923 3300032004 Bacteria 5998
187 Ga0307414_10030088 3300032004 Bacteria 3543
188 Ga0307414_10139266 3300032004 Bacteria 1897
189 Ga0307411_10025806 3300032005 Bacteria 3527
190 Ga0395899_0002611 3300037312 Bacteria 14528
191 Ga0395900_0032290 3300037418 Bacteria 5383
192 Ga0395900_0139004 3300037418 Bacteria 2488
193 Ga0395905_0149137 3300037471 Bacteria 2200
194 Ga0395901_0606717 3300038443 Bacteria 1103
195 Ga0439448_0000682 3300042005 Bacteria 8111
196 Ga0439448_0004384 3300042005 Bacteria 3984
197 Ga0439455_0000193 3300042012 Bacteria 7049
198 Ga0439455_0003550 3300042012 Bacteria 2996
199 Ga0439458_0000401 3300042157 Bacteria 10908
200 Ga0439458_0002963 3300042157 Bacteria 4071
201 Ga0439458_0006362 3300042157 Bacteria 2634
202 Ga0450893_0006592 3300042532 Bacteria 1879
203 Ga0451576_0231867 3300045051 Bacteria 1928
204 Ga0495668_0000234 3300046616 Bacteria 79147
205 Ga0495625_0000195 3300046660 Bacteria 96493
206 Ga0495686_0003763 3300047472 Bacteria 12898
207 Ga0495686_0060166 3300047472 Bacteria 2362
208 Ga0496100_0020645 3300048903 Bacteria 3953
209 Ga0496102_0298389 3300048905 Bacteria 1519
210 Ga0496104_0004488 3300048907 Bacteria 12159
211 Ga0496104_0120014 3300048907 Bacteria 2524
212 Ga0496105_0003581 3300048908 Bacteria 11529
213 Ga0496105_0052640 3300048908 Bacteria 3362
214 Ga0496105_0148313 3300048908 Bacteria 1929
215 Ga0496106_0010276 3300048909 Bacteria 6920
216 Ga0496107_0001239 3300048910 Bacteria 15597
217 Ga0496108_0116180 3300048911 Bacteria 2292
218 Ga0496110_0079522 3300048913 Bacteria 2919
219 Ga0496111_0158602 3300048914 Bacteria 1679
220 Ga0496113_0032884 3300048916 Bacteria 3771
221 Ga0496114_0018464 3300048917 Bacteria 5639
222 Ga0496118_0004003 3300048921 Bacteria 17936
223 Ga0496118_0012474 3300048921 Bacteria 8151
224 Ga0496118_0014121 3300048921 Bacteria 7492
225 Ga0496119_0009849 3300048922 Bacteria 8122
226 Ga0496120_0128875 3300048923 Bacteria 1298
227 Ga0496121_0000024 3300048924 Bacteria 462959
228 Ga0496121_0000720 3300048924 Bacteria 61224
229 Ga0496121_0061649 3300048924 Bacteria 3076
230 Ga0496121_0141475 3300048924 Bacteria 1784
231 Ga0496122_0003016 3300048925 Bacteria 22836
232 Ga0496122_0302575 3300048925 Bacteria 861
233 Ga0496123_0004726 3300048926 Bacteria 14097
234 Ga0496123_0074798 3300048926 Bacteria 2094
235 Ga0496124_0052460 3300048927 Bacteria 3464
236 Ga0496124_0103777 3300048927 Bacteria 2299
237 Ga0496125_0008495 3300048928 Bacteria 10743
238 Ga0496126_0022193 3300048929 Bacteria 6181
239 Ga0501031_0083685 3300049568 Bacteria 2079
240 Ga0501032_0008940 3300049569 Bacteria 7285
241 Ga0501033_0010932 3300049570 Bacteria 6958
242 Ga0501033_0082572 3300049570 Bacteria 2356
243 Ga0501034_0107367 3300049571 Bacteria 2784
244 Ga0501036_0041204 3300049572 Bacteria 3907
245 Ga0501037_0219176 3300049573 Bacteria 1339
246 Ga0501038_0335300 3300049574 Bacteria 1180
247 Ga0501039_0014306 3300049575 Bacteria 6075
248 Ga0501046_0104201 3300049580 Bacteria 2174
249 Ga0501047_0086319 3300049581 Bacteria 3015
250 Ga0501047_0105668 3300049581 Bacteria 2696
251 Ga0501035_0010743 3300049822 Bacteria 8477
252 Ga0501035_0172147 3300049822 Bacteria 1870
253 Ga0501044_0000303 3300049823 Bacteria 62063
254 nmdc:mga03683_3_c1 3300050489 Bacteria 285872
255 nmdc:mga03n38_3000_c1 3300050490 Bacteria 5340
256 nmdc:mga00v17_2784_c1 3300050491 Bacteria 8975
257 nmdc:mga0k408_11042_c1 3300050493 Bacteria 4905
258 nmdc:mga0k408_622_c1 3300050493 Bacteria 19548
259 nmdc:mga07m45_1_c1 3300050496 Bacteria 485809
260 nmdc:mga07m45_36854_c1 3300050496 Bacteria 2726
261 nmdc:mga0sz30_345_c1 3300050516 Bacteria 17739
262 Ga0500592_001554 3300053116 Bacteria 3720
263 Ga0500607_000953 3300053121 Bacteria 27645
264 Ga0500618_002634 3300053125 Bacteria 6609
265 Ga0500658_0038206 3300053134 Bacteria 1912
266 Ga0500559_0000659 3300053136 Bacteria 23217
267 Ga0500559_0032405 3300053136 Bacteria 2246
268 Ga0500568_0000622 3300053139 Bacteria 25535
269 Ga0500590_004589 3300053148 Bacteria 6536
270 Ga0500627_0000070 3300053158 Bacteria 41863
271 Ga0500637_0004881 3300053178 Bacteria 6432
272 Ga0500645_001624 3300053730 Bacteria 11124

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0606717 Ga0395901_0606717_16_765 246
2 3300009101 Ga0105247_10009265 Ga0105247_100092654 251
3 3300009553 Ga0105249_10000002 Ga0105249_10000002259 251
4 3300048922 Ga0496119_0009849 Ga0496119_0009849_21_794 254
5 3300048925 Ga0496122_0302575 Ga0496122_0302575_77_850 254
6 3300005330 Ga0070690_100136105 Ga0070690_1001361052 255
7 3300005331 Ga0070670_100079074 Ga0070670_1000790742 255
8 3300005335 Ga0070666_10027349 Ga0070666_100273493 255
9 3300005353 Ga0070669_100001402 Ga0070669_1000014027 255
10 3300005367 Ga0070667_100047529 Ga0070667_1000475294 255
11 3300005548 Ga0070665_100054014 Ga0070665_1000540142 255
12 3300005842 Ga0068858_100095911 Ga0068858_1000959113 255
13 3300005843 Ga0068860_100015808 Ga0068860_1000158085 255
14 3300009177 Ga0105248_10109354 Ga0105248_101093541 255
15 3300013306 Ga0163162_10227109 Ga0163162_102271092 255
16 3300025315 Ga0207697_10031807 Ga0207697_100318073 255
17 3300025923 Ga0207681_10000288 Ga0207681_100002888 255
18 3300025925 Ga0207650_10425206 Ga0207650_104252061 255
19 3300028379 Ga0268266_10107272 Ga0268266_101072722 255
20 3300048903 Ga0496100_0020645 Ga0496100_0020645_890_1849 255
21 3300048907 Ga0496104_0120014 Ga0496104_0120014_1180_2139 255
22 3300048908 Ga0496105_0052640 Ga0496105_0052640_2133_3092 255
23 3300048909 Ga0496106_0010276 Ga0496106_0010276_631_1590 255
24 3300048910 Ga0496107_0001239 Ga0496107_0001239_12305_13264 255
25 3300048916 Ga0496113_0032884 Ga0496113_0032884_2199_3158 255
26 3300049823 Ga0501044_0000303 Ga0501044_0000303_5988_6977 265
27 3300005355 Ga0070671_100000005 Ga0070671_10000000552 272
28 3300025931 Ga0207644_10000008 Ga0207644_10000008271 272
29 3300006186 Ga0075369_10022720 Ga0075369_100227203 279
30 3300006353 Ga0075370_10037475 Ga0075370_100374752 279
31 3300013102 Ga0157371_10079217 Ga0157371_100792172 279
32 3300050496 nmdc:mga07m45_36854_c1 nmdc:mga07m45_36854_c1_287_1258 279
33 3300047472 Ga0495686_0060166 Ga0495686_0060166_1151_2029 280
34 3300049571 Ga0501034_0107367 Ga0501034_0107367_637_1599 280
35 3300005366 Ga0070659_100055239 Ga0070659_1000552392 285
36 3300005844 Ga0068862_100011016 Ga0068862_1000110165 285
37 3300025904 Ga0207647_10067907 Ga0207647_100679072 285
38 3300028380 Ga0268265_10013560 Ga0268265_100135604 285
39 3300049822 Ga0501035_0172147 Ga0501035_0172147_30_923 285
40 3300042005 Ga0439448_0000682 Ga0439448_0000682_4241_5113 286
41 3300042005 Ga0439448_0004384 Ga0439448_0004384_3085_3957 286
42 3300042012 Ga0439455_0000193 Ga0439455_0000193_1224_2096 286
43 3300042157 Ga0439458_0000401 Ga0439458_0000401_5024_5896 286
44 3300042157 Ga0439458_0002963 Ga0439458_0002963_2654_3526 286
45 3300006353 Ga0075370_10051057 Ga0075370_100510572 287
46 3300025904 Ga0207647_10047088 Ga0207647_100470882 287
47 3300025932 Ga0207690_10181509 Ga0207690_101815092 287
48 3300025933 Ga0207706_10024340 Ga0207706_100243406 287
49 3300042012 Ga0439455_0003550 Ga0439455_0003550_1783_2658 287
50 3300042157 Ga0439458_0006362 Ga0439458_0006362_396_1271 287
51 3300047472 Ga0495686_0003763 Ga0495686_0003763_8219_9094 287
52 3300048914 Ga0496111_0158602 Ga0496111_0158602_223_1098 287
53 3300048925 Ga0496122_0003016 Ga0496122_0003016_19361_20236 287
54 3300048926 Ga0496123_0004726 Ga0496123_0004726_5572_6447 287
55 3300048927 Ga0496124_0103777 Ga0496124_0103777_753_1628 287
56 3300050493 nmdc:mga0k408_11042_c1 nmdc:mga0k408_11042_c1_2431_3306 287
57 3300053136 Ga0500559_0032405 Ga0500559_0032405_1288_2163 287
58 3300003214 JGI25165J46597_1000210 JGI25165J46597_100021012 288
59 3300005614 Ga0068856_100006838 Ga0068856_1000068388 288
60 3300005614 Ga0068856_100070796 Ga0068856_1000707964 288
61 3300005616 Ga0068852_100000052 Ga0068852_10000005258 288
62 3300009093 Ga0105240_10037814 Ga0105240_100378143 288
63 3300009551 Ga0105238_10025625 Ga0105238_100256254 288
64 3300013104 Ga0157370_10000417 Ga0157370_1000041750 288
65 3300013105 Ga0157369_10054005 Ga0157369_100540054 288
66 3300013307 Ga0157372_10047910 Ga0157372_100479105 288
67 3300025231 Ga0207427_101415 Ga0207427_1014155 288
68 3300025250 Ga0209026_1002460 Ga0209026_10024605 288
69 3300025261 Ga0209233_1000003 Ga0209233_1000003102 288
70 3300025924 Ga0207694_10028354 Ga0207694_100283544 288
71 3300026078 Ga0207702_10007061 Ga0207702_100070616 288
72 3300026116 Ga0207674_10086149 Ga0207674_100861494 288
73 3300026142 Ga0207698_10000198 Ga0207698_1000019833 288
74 3300031901 Ga0307406_10219757 Ga0307406_102197572 288
75 3300037312 Ga0395899_0002611 Ga0395899_0002611_6137_7015 288
76 3300037418 Ga0395900_0032290 Ga0395900_0032290_1937_2815 288
77 3300037418 Ga0395900_0139004 Ga0395900_0139004_994_1872 288
78 3300037471 Ga0395905_0149137 Ga0395905_0149137_11_889 288
79 3300042532 Ga0450893_0006592 Ga0450893_0006592_699_1640 288
80 3300048921 Ga0496118_0004003 Ga0496118_0004003_5780_6661 289
81 3300048921 Ga0496118_0012474 Ga0496118_0012474_1683_2564 289
82 3300048923 Ga0496120_0128875 Ga0496120_0128875_203_1084 289
83 3300048924 Ga0496121_0061649 Ga0496121_0061649_963_1844 289
84 3300048924 Ga0496121_0141475 Ga0496121_0141475_458_1339 289
85 3300048926 Ga0496123_0074798 Ga0496123_0074798_95_976 289
86 3300048928 Ga0496125_0008495 Ga0496125_0008495_2203_3084 289
87 3300002459 JGI24751J29686_10000270 JGI24751J29686_1000027014 291
88 3300005843 Ga0068860_100000391 Ga0068860_10000039143 291
89 3300005844 Ga0068862_100000014 Ga0068862_100000014139 291
90 3300015690 Ga0183363_1003 Ga0183363_100399 291
91 3300025900 Ga0207710_10009946 Ga0207710_100099464 291
92 3300025961 Ga0207712_10000002 Ga0207712_10000002630 291
93 3300028380 Ga0268265_10000048 Ga0268265_100000488 291
94 3300028381 Ga0268264_10000439 Ga0268264_1000043946 291
95 3300031456 Ga0307513_10041863 Ga0307513_100418633 291
96 3300032004 Ga0307414_10007178 Ga0307414_100071781 291
97 3300031548 Ga0307408_100184682 Ga0307408_1001846822 294
98 3300031824 Ga0307413_10047892 Ga0307413_100478923 294
99 3300031911 Ga0307412_10251610 Ga0307412_102516101 294
100 3300005367 Ga0070667_100017417 Ga0070667_1000174175 296
101 3300005548 Ga0070665_100008001 Ga0070665_1000080015 296
102 3300005618 Ga0068864_100004814 Ga0068864_1000048143 296
103 3300005841 Ga0068863_100000287 Ga0068863_10000028723 296
104 3300005842 Ga0068858_100011491 Ga0068858_1000114918 296
105 3300005843 Ga0068860_100000089 Ga0068860_10000008935 296
106 3300025986 Ga0207658_10003639 Ga0207658_100036395 296
107 3300026035 Ga0207703_10136529 Ga0207703_101365291 296
108 3300026088 Ga0207641_10000069 Ga0207641_10000069115 296
109 3300026095 Ga0207676_10035961 Ga0207676_100359614 296
110 3300028379 Ga0268266_10007134 Ga0268266_100071344 296
111 3300028381 Ga0268264_10000160 Ga0268264_10000160113 296
112 iso_pu_bacteria 2643221560 2643819236 296
113 3300031824 Ga0307413_10007575 Ga0307413_100075751 297
114 3300032002 Ga0307416_100018039 Ga0307416_1000180394 297
115 3300032005 Ga0307411_10025806 Ga0307411_100258062 297
116 3300003794 Ga0055531_10038253 Ga0055531_100382531 298
117 3300025292 Ga0209676_1021746 Ga0209676_10217462 298
118 3300025304 Ga0209257_1001563 Ga0209257_10015639 298
119 iso_pu_bacteria 2643221563 2643835097 298
120 iso_pu_bacteria 2643221608 2644056024 298
121 iso_pu_bacteria 2852653556 2852655911 298
122 iso_pu_bacteria 2852680915 2852683035 298
123 3300046616 Ga0495668_0000234 Ga0495668_0000234_29010_29960 299
124 3300053116 Ga0500592_001554 Ga0500592_001554_466_1425 299
125 3300053158 Ga0500627_0000070 Ga0500627_0000070_25320_26279 299
126 3300003781 Ga0055536_1003971 Ga0055536_10039715 300
127 3300003794 Ga0055531_10000860 Ga0055531_1000086012 300
128 3300025292 Ga0209676_1001134 Ga0209676_100113417 300
129 3300025304 Ga0209257_1000330 Ga0209257_100033020 300
130 3300032004 Ga0307414_10139266 Ga0307414_101392662 300
131 3300046660 Ga0495625_0000195 Ga0495625_0000195_33538_34497 300
132 3300049568 Ga0501031_0083685 Ga0501031_0083685_120_1076 300
133 3300049569 Ga0501032_0008940 Ga0501032_0008940_6228_7184 300
134 3300049570 Ga0501033_0010932 Ga0501033_0010932_217_1173 300
135 3300049572 Ga0501036_0041204 Ga0501036_0041204_2700_3656 300
136 3300049573 Ga0501037_0219176 Ga0501037_0219176_101_1057 300
137 3300049574 Ga0501038_0335300 Ga0501038_0335300_212_1168 300
138 3300049575 Ga0501039_0014306 Ga0501039_0014306_101_1057 300
139 3300049580 Ga0501046_0104201 Ga0501046_0104201_1004_1960 300
140 3300049581 Ga0501047_0086319 Ga0501047_0086319_344_1300 300
141 3300049822 Ga0501035_0010743 Ga0501035_0010743_4554_5510 300
142 3300053134 Ga0500658_0038206 Ga0500658_0038206_623_1576 300
143 3300032004 Ga0307414_10000212 Ga0307414_1000021221 301
144 3300003781 Ga0055536_1004463 Ga0055536_10044633 302
145 3300025292 Ga0209676_1000897 Ga0209676_100089736 302
146 3300025298 Ga0209050_1013837 Ga0209050_10138373 302
147 3300031911 Ga0307412_10164088 Ga0307412_101640882 302
148 3300032004 Ga0307414_10007923 Ga0307414_100079234 302
149 3300053139 Ga0500568_0000622 Ga0500568_0000622_14845_15810 302
150 iso_pu_bacteria 2919138771 2919138889 302
151 3300003781 Ga0055536_1002969 Ga0055536_10029694 303
152 3300003791 Ga0055530_10000054 Ga0055530_1000005413 303
153 3300003794 Ga0055531_10000492 Ga0055531_1000049216 303
154 3300006048 Ga0075363_100008975 Ga0075363_1000089752 303
155 3300006051 Ga0075364_10009428 Ga0075364_100094282 303
156 3300006186 Ga0075369_10000161 Ga0075369_1000016115 303
157 3300006195 Ga0075366_10000262 Ga0075366_1000026218 303
158 3300025291 Ga0209675_1000131 Ga0209675_100013198 303
159 3300025292 Ga0209676_1000746 Ga0209676_10007464 303
160 3300025294 Ga0209025_1006029 Ga0209025_10060295 303
161 3300025298 Ga0209050_1000113 Ga0209050_100011321 303
162 3300025304 Ga0209257_1000083 Ga0209257_100008330 303
163 3300025304 Ga0209257_1000126 Ga0209257_10001264 303
164 3300027907 Ga0207428_10268693 Ga0207428_102686932 303
165 3300032004 Ga0307414_10030088 Ga0307414_100300883 303
166 3300048908 Ga0496105_0148313 Ga0496105_0148313_148_1113 303
167 3300050489 nmdc:mga03683_3_c1 nmdc:mga03683_3_c1_142975_143925 303
168 3300050490 nmdc:mga03n38_3000_c1 nmdc:mga03n38_3000_c1_2963_3913 303
169 3300050491 nmdc:mga00v17_2784_c1 nmdc:mga00v17_2784_c1_816_1766 303
170 3300050493 nmdc:mga0k408_622_c1 nmdc:mga0k408_622_c1_7327_8277 303
171 3300050516 nmdc:mga0sz30_345_c1 nmdc:mga0sz30_345_c1_12731_13681 303
172 3300005367 Ga0070667_100205666 Ga0070667_1002056661 304
173 3300005616 Ga0068852_100022941 Ga0068852_1000229414 304
174 3300005617 Ga0068859_100011785 Ga0068859_1000117854 304
175 3300005842 Ga0068858_100004623 Ga0068858_10000462311 304
176 3300006058 Ga0075432_10019819 Ga0075432_100198193 304
177 3300006353 Ga0075370_10000195 Ga0075370_100001957 304
178 3300006931 Ga0097620_100011785 Ga0097620_1000117854 304
179 3300025315 Ga0207697_10016703 Ga0207697_100167034 304
180 3300025931 Ga0207644_10006877 Ga0207644_100068774 304
181 3300025986 Ga0207658_10437168 Ga0207658_104371681 304
182 3300026035 Ga0207703_10001303 Ga0207703_100013032 304
183 3300027907 Ga0207428_10135704 Ga0207428_101357042 304
184 3300048905 Ga0496102_0298389 Ga0496102_0298389_531_1481 304
185 3300048911 Ga0496108_0116180 Ga0496108_0116180_1245_2195 304
186 3300048913 Ga0496110_0079522 Ga0496110_0079522_1809_2759 304
187 3300048917 Ga0496114_0018464 Ga0496114_0018464_4184_5134 304
188 3300048927 Ga0496124_0052460 Ga0496124_0052460_1370_2320 304
189 3300048929 Ga0496126_0022193 Ga0496126_0022193_4350_5300 304
190 3300050496 nmdc:mga07m45_1_c1 nmdc:mga07m45_1_c1_301592_302545 304
191 3300005327 Ga0070658_10000811 Ga0070658_1000081131 305
192 3300005563 Ga0068855_100014258 Ga0068855_1000142584 305
193 3300005577 Ga0068857_100239994 Ga0068857_1002399942 305
194 3300005578 Ga0068854_100001427 Ga0068854_10000142712 305
195 3300005614 Ga0068856_100011589 Ga0068856_1000115894 305
196 3300005616 Ga0068852_100000259 Ga0068852_10000025940 305
197 3300005616 Ga0068852_100095644 Ga0068852_1000956442 305
198 3300009093 Ga0105240_10008968 Ga0105240_100089689 305
199 3300025904 Ga0207647_10012727 Ga0207647_100127272 305
200 3300025909 Ga0207705_10000007 Ga0207705_10000007247 305
201 3300025913 Ga0207695_10004641 Ga0207695_100046419 305
202 3300025949 Ga0207667_10031444 Ga0207667_100314443 305
203 3300025981 Ga0207640_10001366 Ga0207640_1000136610 305
204 3300026078 Ga0207702_10032314 Ga0207702_100323142 305
205 3300026142 Ga0207698_10000036 Ga0207698_10000036109 305
206 3300026142 Ga0207698_10049731 Ga0207698_100497313 305
207 3300031250 Ga0265331_10012805 Ga0265331_100128052 305
208 3300053121 Ga0500607_000953 Ga0500607_000953_18519_19481 305
209 3300053136 Ga0500559_0000659 Ga0500559_0000659_14031_14993 305
210 3300053178 Ga0500637_0004881 Ga0500637_0004881_5119_6081 305
211 3300053730 Ga0500645_001624 Ga0500645_001624_1420_2382 305
212 3300049581 Ga0501047_0105668 Ga0501047_0105668_1193_2143 306
213 3300048907 Ga0496104_0004488 Ga0496104_0004488_10955_11902 307
214 3300048908 Ga0496105_0003581 Ga0496105_0003581_3120_4067 307
215 3300048921 Ga0496118_0014121 Ga0496118_0014121_3261_4208 307
216 3300048924 Ga0496121_0000720 Ga0496121_0000720_7043_7990 307
217 3300045051 Ga0451576_0231867 Ga0451576_0231867_216_1178 308
218 3300048924 Ga0496121_0000024 Ga0496121_0000024_193916_194899 308
219 3300014326 Ga0157380_10517326 Ga0157380_105173261 309
220 3300053148 Ga0500590_004589 Ga0500590_004589_649_1626 310
221 3300005366 Ga0070659_100118968 Ga0070659_1001189682 312
222 3300005539 Ga0068853_100021348 Ga0068853_1000213485 312
223 3300025932 Ga0207690_10081583 Ga0207690_100815831 312
224 3300026041 Ga0207639_10013378 Ga0207639_100133781 312
225 3300005327 Ga0070658_10057200 Ga0070658_100572002 313
226 3300005329 Ga0070683_100122853 Ga0070683_1001228533 313
227 3300005336 Ga0070680_100100574 Ga0070680_1001005742 313
228 3300005339 Ga0070660_100017379 Ga0070660_1000173794 313
229 3300005344 Ga0070661_100021139 Ga0070661_1000211394 313
230 3300005366 Ga0070659_100006907 Ga0070659_1000069077 313
231 3300005458 Ga0070681_10014923 Ga0070681_100149235 313
232 3300005539 Ga0068853_100004207 Ga0068853_1000042075 313
233 3300053125 Ga0500618_002634 Ga0500618_002634_482_1480 313
234 iso_pu_bacteria 2643221588 2643951088 313
235 3300005366 Ga0070659_100070111 Ga0070659_1000701112 314
236 3300005457 Ga0070662_100001873 Ga0070662_1000018734 314
237 3300005535 Ga0070684_100124716 Ga0070684_1001247161 314
238 3300005563 Ga0068855_100023316 Ga0068855_1000233162 314
239 3300005563 Ga0068855_100023687 Ga0068855_1000236872 314
240 3300005564 Ga0070664_100086450 Ga0070664_1000864502 314
241 3300005577 Ga0068857_100007686 Ga0068857_1000076867 314
242 3300005614 Ga0068856_100035045 Ga0068856_1000350455 314
243 3300013100 Ga0157373_10034904 Ga0157373_100349044 314
244 3300013102 Ga0157371_10004577 Ga0157371_1000457712 314
245 3300013104 Ga0157370_10004914 Ga0157370_1000491412 314
246 3300013105 Ga0157369_10000384 Ga0157369_1000038428 314
247 3300013307 Ga0157372_10071411 Ga0157372_100714114 314
248 3300013307 Ga0157372_10194780 Ga0157372_101947802 314
249 3300025912 Ga0207707_10167181 Ga0207707_101671812 314
250 3300025917 Ga0207660_10036714 Ga0207660_100367144 314
251 3300025919 Ga0207657_10000769 Ga0207657_1000076932 314
252 3300025921 Ga0207652_10323064 Ga0207652_103230642 314
253 3300025932 Ga0207690_10020727 Ga0207690_100207272 314
254 3300025932 Ga0207690_10038278 Ga0207690_100382783 314
255 3300025933 Ga0207706_10004634 Ga0207706_100046344 314
256 3300025949 Ga0207667_10022172 Ga0207667_100221727 314
257 3300025981 Ga0207640_10203540 Ga0207640_102035402 314
258 3300026041 Ga0207639_10035588 Ga0207639_100355884 314
259 3300026078 Ga0207702_10064756 Ga0207702_100647563 314
260 3300026116 Ga0207674_10021628 Ga0207674_100216285 314
261 3300026116 Ga0207674_10025900 Ga0207674_100259004 314
262 3300049570 Ga0501033_0082572 Ga0501033_0082572_143_1090 315
263 3300005530 Ga0070679_100002486 Ga0070679_10000248613 316
264 3300025921 Ga0207652_10002433 Ga0207652_1000243310 316
265 3300002075 JGI24738J21930_10010540 JGI24738J21930_100105401 317
266 3300005327 Ga0070658_10035552 Ga0070658_100355524 317
267 3300005334 Ga0068869_100177664 Ga0068869_1001776642 317
268 3300005339 Ga0070660_100099163 Ga0070660_1000991632 317
269 3300005354 Ga0070675_100167497 Ga0070675_1001674972 317
270 3300005563 Ga0068855_100024370 Ga0068855_1000243704 317
271 3300006237 Ga0097621_100084374 Ga0097621_1000843743 317
272 3300011119 Ga0105246_10000074 Ga0105246_100000744 317
273 3300014745 Ga0157377_10250719 Ga0157377_102507191 317
274 3300025909 Ga0207705_10000639 Ga0207705_1000063922 317
275 3300025909 Ga0207705_10055002 Ga0207705_100550022 317
276 3300025919 Ga0207657_10033183 Ga0207657_100331833 317
277 3300025921 Ga0207652_10165751 Ga0207652_101657512 317
278 3300025921 Ga0207652_10411062 Ga0207652_104110622 317
279 3300025949 Ga0207667_10003313 Ga0207667_1000331321 317

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02195

ParBc

ParB/Sulfiredoxin domain

69

159

0.98

PF17762

HTH_ParB

HTH domain found in ParB protein

209

257

0.95

PF23552

278

328

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6y93-assembly1.cif.gz_A crystal structure of the dna-binding domain of the nucleoid occlusion factor (noc) complexed to the noc-binding site (nbs) 0.9273 154 249
6y93-assembly1.cif.gz_B crystal structure of the dna-binding domain of the nucleoid occlusion factor (noc) complexed to the noc-binding site (nbs) 0.9082 145 249
6s6h-assembly1.cif.gz_A crystal structure of the dna binding domain of the chromosome-partitioning protein parb complexed to the centromeric pars site 0.8661 140 247
5noc-assembly1.cif.gz_B solution nmr structure of the c-terminal domain of parb (spo0j) 0.8574 263 315
6y93-assembly1.cif.gz_A crystal structure of the dna-binding domain of the nucleoid occlusion factor (noc) complexed to the noc-binding site (nbs) 0.8446 154 249
ID Description Score Start End Superfamily
af_Q2FUQ5_107_218_1.10.10.2830 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9333 136 244 1.10.10.2830
1vz0D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9173 136 247 1.10.10.2830
af_Q2FUQ5_43_106_3.90.1530.30 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain; 0.9123 72 135 3.90.1530.30
af_Q2FUQ5_107_218_1.10.10.2830 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9018 136 244 1.10.10.2830
af_Q2FUQ5_43_106_3.90.1530.30 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain; 0.8993 72 135 3.90.1530.30
ID Description Score Start End GO Terms
AF-A0A3L7W5V0-F1-model_v4 ParB/RepB/Spo0J family partition protein 0.9574 57 148 GO:0003677
GO:0005694
GO:0007059
AF-A0A264E0R0-F1-model_v4 deleted 0.9239 56 147
AF-A0A4Q3WYH3-F1-model_v4 deleted 0.9082 60 153
AF-A0A143XZU3-F1-model_v4 Chromosome-partitioning protein ParB 0.8989 56 147 GO:0003677
GO:0005694
GO:0007059
AF-Q5NXB1-F1-model_v4 ParB/Sulfiredoxin domain-containing protein 0.8929 60 244 GO:0005694
GO:0007059
GO:0043565

Feature Viewer

pLDDT pTM Quality
78.51 0.6 Medium
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Predicted Structure (AlphaFold2)

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